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Conserved domains on  [gi|1720400213|ref|XP_030107808|]
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methionine aminopeptidase 1D, mitochondrial isoform X8 [Mus musculus]

Protein Classification

methionyl aminopeptidase( domain architecture ID 10099531)

methionyl aminopeptidase catalyzes the hydrolytic removal of N-terminal methionine residues

CATH:  3.90.230.10
EC:  3.4.11.18
Gene Ontology:  GO:0070006|GO:0046872|GO:0006508
PubMed:  7674922

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
 1-280 1.88e-96

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


:

Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 283.62  E-value: 1.88e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:cd01086    26 VTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGE 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:cd01086   106 VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAI-------EKYAEKNGYSVVREFGG-------------------- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPVSEDsncppawpwqtaqewvgsentdttkaNDNDLPMEEGMAFTIEPIITEG 240
Cdd:cd01086   159 --H------------GIGRKFHEEPQIPNYGR--------------------------PGTGPKLKPGMVFTIEPMINLG 198

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTK 280
Cdd:cd01086   199 TYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238
 
Name Accession Description Interval E-value
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
 1-280 1.88e-96

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 283.62  E-value: 1.88e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:cd01086    26 VTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGE 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:cd01086   106 VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAI-------EKYAEKNGYSVVREFGG-------------------- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPVSEDsncppawpwqtaqewvgsentdttkaNDNDLPMEEGMAFTIEPIITEG 240
Cdd:cd01086   159 --H------------GIGRKFHEEPQIPNYGR--------------------------PGTGPKLKPGMVFTIEPMINLG 198

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTK 280
Cdd:cd01086   199 TYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
1-284 6.31e-89

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 264.56  E-value: 6.31e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:COG0024    34 VTTLELDRIAEEFIRDHGAIPAFLGYYGFPKSICTSVNEVVVHGIPSDRVLKDGDIVNIDVGAILDGYHGDSARTFVVGE 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTI-------RCRLVTlkphnssewfaslsTFCGtwdriilswtprn 153
Cdd:COG0024   114 VSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIqsyaesnGYSVVR--------------EFVG------------- 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 154 lascflprlHldlgrpgevasgGTGNSRCEEKELPvsedsNCPPAwpwqtaqewvgsentdttkanDNDLPMEEGMAFTI 233
Cdd:COG0024   167 ---------H------------GIGREMHEEPQVP-----NYGRP---------------------GRGPRLKPGMVLAI 199

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1720400213 234 EPIITEGSPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKLPQE 284
Cdd:COG0024   200 EPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTEDGPEILTLPDGG 250
PRK05716 PRK05716
methionine aminopeptidase; Validated
 1-284 1.21e-83

methionine aminopeptidase; Validated


Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 251.59  E-value: 1.21e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:PRK05716   36 VTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGE 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlVTLKPHNssewFASLSTFCGtwdriilswtprnlascflp 160
Cdd:PRK05716  116 ISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQ---KYAEAEG----FSVVREYCG-------------------- 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPvsedsncppawpwqtaqewvgseNTDttkANDNDLPMEEGMAFTIEPIITEG 240
Cdd:PRK05716  169 --H------------GIGRKFHEEPQIP-----------------------HYG---APGDGPVLKEGMVFTIEPMINAG 208

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKLPQE 284
Cdd:PRK05716  209 KREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGPEILTLRPEE 252
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
 1-281 8.52e-67

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 208.36  E-value: 8.52e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:TIGR00500  34 VSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGK 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:TIGR00500 114 ISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAI-------QKYAEAKGFSVVREYCG-------------------- 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPVSEDSNCPPAwpwqtaqewvgsentdttkandndlpMEEGMAFTIEPIITEG 240
Cdd:TIGR00500 167 --H------------GIGRKFHEEPQIPNYGKKFTNVR--------------------------LKEGMVFTIEPMVNTG 206

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKL 281
Cdd:TIGR00500 207 TEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGPEILTER 247
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
 1-272 1.88e-33

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 121.19  E-value: 1.88e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYpsplGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYN-GYHGDTSETFLVG 79
Cdd:pfam00557  25 VTERELAAELEAARLRRGGA----RGPAFPPIVASGPNAAIPHYIPNDRVLKPGDLVLIDVGAEYDgGYCSDITRTFVVG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  80 NVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlVTLKPHNSSEWFASlstFCGtwdriilswtprnlascfl 159
Cdd:pfam00557 101 KPSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAR---EVLEEAGLGEYFPH---GLG------------------- 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 160 prlHldlgrpgevasgGTGNSRCEEKELPvsedsncppawpwqtaqewvgsentdttkANDNDLPMEEGMAFTIEPIITE 239
Cdd:pfam00557 156 ---H------------GIGLEVHEGPYIS-----------------------------RGGDDRVLEPGMVFTIEPGIYF 191

                         250       260       270
                  ....*....|....*....|....*....|...
gi 1720400213 240 gspefkvledawtvvsLDNQRSAQFEHTVLITP 272
Cdd:pfam00557 192 ----------------IPGWGGVRIEDTVLVTE 208
 
Name Accession Description Interval E-value
MetAP1 cd01086
Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
 1-280 1.88e-96

Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238519 [Multi-domain]  Cd Length: 238  Bit Score: 283.62  E-value: 1.88e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:cd01086    26 VTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGDIVNIDVGVELDGYHGDSARTFIVGE 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:cd01086   106 VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAI-------EKYAEKNGYSVVREFGG-------------------- 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPVSEDsncppawpwqtaqewvgsentdttkaNDNDLPMEEGMAFTIEPIITEG 240
Cdd:cd01086   159 --H------------GIGRKFHEEPQIPNYGR--------------------------PGTGPKLKPGMVFTIEPMINLG 198

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTK 280
Cdd:cd01086   199 TYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238
Map COG0024
Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];
1-284 6.31e-89

Methionine aminopeptidase [Translation, ribosomal structure and biogenesis];


Pssm-ID: 439795 [Multi-domain]  Cd Length: 250  Bit Score: 264.56  E-value: 6.31e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:COG0024    34 VTTLELDRIAEEFIRDHGAIPAFLGYYGFPKSICTSVNEVVVHGIPSDRVLKDGDIVNIDVGAILDGYHGDSARTFVVGE 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTI-------RCRLVTlkphnssewfaslsTFCGtwdriilswtprn 153
Cdd:COG0024   114 VSPEARRLVEVTEEALYAGIAAAKPGNRLGDIGHAIqsyaesnGYSVVR--------------EFVG------------- 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 154 lascflprlHldlgrpgevasgGTGNSRCEEKELPvsedsNCPPAwpwqtaqewvgsentdttkanDNDLPMEEGMAFTI 233
Cdd:COG0024   167 ---------H------------GIGREMHEEPQVP-----NYGRP---------------------GRGPRLKPGMVLAI 199

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1720400213 234 EPIITEGSPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKLPQE 284
Cdd:COG0024   200 EPMINAGTPEVKVLDDGWTVVTKDGSLSAQFEHTVAVTEDGPEILTLPDGG 250
PRK05716 PRK05716
methionine aminopeptidase; Validated
 1-284 1.21e-83

methionine aminopeptidase; Validated


Pssm-ID: 235576 [Multi-domain]  Cd Length: 252  Bit Score: 251.59  E-value: 1.21e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:PRK05716   36 VTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPSDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGE 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlVTLKPHNssewFASLSTFCGtwdriilswtprnlascflp 160
Cdd:PRK05716  116 ISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQ---KYAEAEG----FSVVREYCG-------------------- 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPvsedsncppawpwqtaqewvgseNTDttkANDNDLPMEEGMAFTIEPIITEG 240
Cdd:PRK05716  169 --H------------GIGRKFHEEPQIP-----------------------HYG---APGDGPVLKEGMVFTIEPMINAG 208

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKLPQE 284
Cdd:PRK05716  209 KREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGPEILTLRPEE 252
PRK12896 PRK12896
methionine aminopeptidase; Reviewed
 1-279 1.38e-71

methionine aminopeptidase; Reviewed


Pssm-ID: 237252 [Multi-domain]  Cd Length: 255  Bit Score: 220.86  E-value: 1.38e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:PRK12896   41 MTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGIPGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGP 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlkphnssEWFASLSTFCgtwdrIIlswtpRNLAScflp 160
Cdd:PRK12896  121 VSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAI-------------EDFAKKNGYS-----VV-----RDLTG---- 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEkelPvsedsNCPPAWpwqtaqewvgsentdtTKANDNDLpMEEGMAFTIEPIITEG 240
Cdd:PRK12896  174 --H------------GVGRSLHEE---P-----SVILTY----------------TDPLPNRL-LRPGMTLAVEPFLNLG 214

                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILT 279
Cdd:PRK12896  215 AKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGPEILT 253
PLN03158 PLN03158
methionine aminopeptidase; Provisional
 1-282 1.01e-68

methionine aminopeptidase; Provisional


Pssm-ID: 215607 [Multi-domain]  Cd Length: 396  Bit Score: 218.17  E-value: 1.01e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:PLN03158  168 VTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGN 247

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:PLN03158  248 VDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVI-------NRHATMSGLSVVKSYCG-------------------- 300

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGnsrceekelpvsEDSNCPPAWPWQTAQEWVGSentdttkandndlpMEEGMAFTIEPIITEG 240
Cdd:PLN03158  301 --H------------GIG------------ELFHCAPNIPHYARNKAVGV--------------MKAGQVFTIEPMINAG 340

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILT-KLP 282
Cdd:PLN03158  341 VWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTaRLP 383
met_pdase_I TIGR00500
methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. ...
 1-281 8.52e-67

methionine aminopeptidase, type I; Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine. [Protein fate, Protein modification and repair]


Pssm-ID: 129591 [Multi-domain]  Cd Length: 247  Bit Score: 208.36  E-value: 8.52e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:TIGR00500  34 VSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGK 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIrcrlvtlKPHNSSEWFASLSTFCGtwdriilswtprnlascflp 160
Cdd:TIGR00500 114 ISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAI-------QKYAEAKGFSVVREYCG-------------------- 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlHldlgrpgevasgGTGNSRCEEKELPVSEDSNCPPAwpwqtaqewvgsentdttkandndlpMEEGMAFTIEPIITEG 240
Cdd:TIGR00500 167 --H------------GIGRKFHEEPQIPNYGKKFTNVR--------------------------LKEGMVFTIEPMVNTG 206

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKL 281
Cdd:TIGR00500 207 TEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGPEILTER 247
PRK12318 PRK12318
methionyl aminopeptidase;
2-281 1.87e-46

methionyl aminopeptidase;


Pssm-ID: 183434 [Multi-domain]  Cd Length: 291  Bit Score: 157.67  E-value: 1.87e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   2 TTEEIDALVHWEIIRHDAYPSPLGYGR--FPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG 79
Cdd:PRK12318   75 TTNELDELSRELHKEYNAIPAPLNYGSppFPKTICTSLNEVICHGIPNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIG 154

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  80 NVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRCRLVTLKphnssewFASLSTFCGtwdriilswtprnlascfl 159
Cdd:PRK12318  155 EVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYG-------FSVVDQFVG------------------- 208

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 160 prlHldlgrpgevasgGTGNSRCEEKELPVSEdsncppawpwqtaqewvgsentdttkaNDNDLPMEEGMAFTIEPIITE 239
Cdd:PRK12318  209 ---H------------GVGIKFHENPYVPHHR---------------------------NSSKIPLAPGMIFTIEPMINV 246

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1720400213 240 GSPE-FKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKL 281
Cdd:PRK12318  247 GKKEgVIDPINHWEARTCDNQPSAQWEHTILITETGYEILTLL 289
Peptidase_M24 pfam00557
Metallopeptidase family M24; This family contains metallopeptidases. It also contains ...
 1-272 1.88e-33

Metallopeptidase family M24; This family contains metallopeptidases. It also contains non-peptidase homologs such as the N terminal domain of Spt16 which is a histone H3-H4 binding module.


Pssm-ID: 459852 [Multi-domain]  Cd Length: 208  Bit Score: 121.19  E-value: 1.88e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYpsplGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYN-GYHGDTSETFLVG 79
Cdd:pfam00557  25 VTERELAAELEAARLRRGGA----RGPAFPPIVASGPNAAIPHYIPNDRVLKPGDLVLIDVGAEYDgGYCSDITRTFVVG 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  80 NVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlVTLKPHNSSEWFASlstFCGtwdriilswtprnlascfl 159
Cdd:pfam00557 101 KPSPEQRELYEAVLEAQEAAIAAVKPGVTGGDVDAAAR---EVLEEAGLGEYFPH---GLG------------------- 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 160 prlHldlgrpgevasgGTGNSRCEEKELPvsedsncppawpwqtaqewvgsentdttkANDNDLPMEEGMAFTIEPIITE 239
Cdd:pfam00557 156 ---H------------GIGLEVHEGPYIS-----------------------------RGGDDRVLEPGMVFTIEPGIYF 191

                         250       260       270
                  ....*....|....*....|....*....|...
gi 1720400213 240 gspefkvledawtvvsLDNQRSAQFEHTVLITP 272
Cdd:pfam00557 192 ----------------IPGWGGVRIEDTVLVTE 208
PRK12897 PRK12897
type I methionyl aminopeptidase;
1-281 4.39e-31

type I methionyl aminopeptidase;


Pssm-ID: 171806  Cd Length: 248  Bit Score: 116.29  E-value: 4.39e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPLGYGRFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGN 80
Cdd:PRK12897   35 ITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPADVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGK 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  81 VDESGKKLVEVARRcrdeaiaACRAGAPFSVIGNTIRCRLVTLKPHNSSEWFASLSTFCGTwdriilswtprnlascflp 160
Cdd:PRK12897  115 VSDEAEKLLLVAEN-------ALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVARDFTGH------------------- 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 161 rlhldlgrpgevasgGTGNSRCEEKELpvsedsncppawpWQTAQEWVGSEntdttkandndlpMEEGMAFTIEPIITEG 240
Cdd:PRK12897  169 ---------------GIGKEIHEEPAI-------------FHFGKQGQGPE-------------LQEGMVITIEPIVNVG 207

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1720400213 241 SPEFKVLEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKL 281
Cdd:PRK12897  208 MRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGPIILTKL 248
APP_MetAP cd01066
A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as ...
 1-274 2.73e-24

A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.


Pssm-ID: 238514 [Multi-domain]  Cd Length: 207  Bit Score: 97.14  E-value: 2.73e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAYPSPlgygrfpkSVCTSVNNV--LCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLV 78
Cdd:cd01066    26 VTEAEVAAAIEQALRAAGGYPAG--------PTIVGSGARtaLPHYRPDDRRLQEGDLVLVDLGGVYDGYHADLTRTFVI 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  79 GNVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlvtlkphnssEWFASlstfcgtwdriilswtprnlascf 158
Cdd:cd01066    98 GEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAR------------EVLEE------------------------ 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 159 lprlHLDLGRPGEVASGGTGnsrceekeLPVSEDsncppawpwqtaqeWVGSENTDTtkandndlPMEEGMAFTIEPIIt 238
Cdd:cd01066   142 ----HGLGPNFGHRTGHGIG--------LEIHEP--------------PVLKAGDDT--------VLEPGMVFAVEPGL- 186

                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1720400213 239 egspefkvledawtvvSLDNQRSAQFEHTVLITPRG 274
Cdd:cd01066   187 ----------------YLPGGGGVRIEDTVLVTEDG 206
PepP COG0006
Xaa-Pro aminopeptidase [Amino acid transport and metabolism];
1-284 1.32e-20

Xaa-Pro aminopeptidase [Amino acid transport and metabolism];


Pssm-ID: 439777 [Multi-domain]  Cd Length: 299  Bit Score: 89.11  E-value: 1.32e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDA-YPSplgygrFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG 79
Cdd:COG0006   104 VTEREVAAELEAAMRRRGAeGPS------FDTIVASGENAAIPHYTPTDRPLKPGDLVLIDAGAEYDGYTSDITRTVAVG 177

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  80 NVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlvtlkphnssewfaslstfcgtwdRIIlswTPRNLASCFL 159
Cdd:COG0006   178 EPSDEQREIYEAVLEAQEAAIAALKPGVTGGEVDAAAR--------------------------DVL---AEAGYGEYFP 228

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 160 PRL-HldlgrpgevasgGTGnsrceekeLPVSEdsncPPAWpwqtaqewvgsentdttkANDNDLPMEEGMAFTIEPIIT 238
Cdd:COG0006   229 HGTgH------------GVG--------LDVHE----GPQI------------------SPGNDRPLEPGMVFTIEPGIY 266

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1720400213 239 egspefkvLEDAWTVvsldnqRSaqfEHTVLITPRGVEILTKLPQE 284
Cdd:COG0006   267 --------IPGIGGV------RI---EDTVLVTEDGAEVLTRLPRE 295
APP-like cd01092
Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse ...
 1-117 1.42e-16

Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.


Pssm-ID: 238525 [Multi-domain]  Cd Length: 208  Bit Score: 76.39  E-value: 1.42e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDAY-PSplgygrFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG 79
Cdd:cd01092    26 MTEREVAAELEYFMRKLGAEgPS------FDTIVASGPNSALPHGVPSDRKIEEGDLVLIDFGAIYDGYCSDITRTVAVG 99

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1720400213  80 NVDESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIR 117
Cdd:cd01092   100 EPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAAR 137
Prolidase cd01087
Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline ...
 5-280 8.94e-07

Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.


Pssm-ID: 238520 [Multi-domain]  Cd Length: 243  Bit Score: 48.72  E-value: 8.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   5 EIDALVHWEIIRHDAypsPLGYGrfPKSVCTSVNNVLcHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVgnvdeS 84
Cdd:cd01087    30 ELEAEFEYEFRSRGA---RLAYS--YIVAAGSNAAIL-HYVHNDQPLKDGDLVLIDAGAEYGGYASDITRTFPV-----N 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  85 GK------KLVEVARRCRDEAIAACRAGAPFSVIgNTIRCRLVTlkphnssEWFASLSTFCGTWDRIILSWTPRNlascF 158
Cdd:cd01087    99 GKftdeqrELYEAVLAAQKAAIAACKPGVSYEDI-HLLAHRVLA-------EGLKELGILKGDVDEIVESGAYAK----F 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 159 LPrlHldlgrpgevasgGTGNsrceekelpvsedsncppawpwqtaqeWVGSENTDT---TKANDNDLPMEEGMAFTIEP 235
Cdd:cd01087   167 FP--H------------GLGH---------------------------YLGLDVHDVggyLRYLRRARPLEPGMVITIEP 205

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1720400213 236 ---IItegsPEFKVLEDAWTVVSL---DNqrsaqfehtVLITPRGVEILTK 280
Cdd:cd01087   206 giyFI----PDLLDVPEYFRGGGIrieDD---------VLVTEDGPENLTR 243
PRK07281 PRK07281
methionyl aminopeptidase;
29-284 1.16e-06

methionyl aminopeptidase;


Pssm-ID: 180918  Cd Length: 286  Bit Score: 49.08  E-value: 1.16e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  29 FPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTV------------------------YYNGYHG---DTSETFLVGNV 81
Cdd:PRK07281   67 YPYATCCGLNDEVAHAFPRHYILKEGDLLKVDMVLsepldksivdvsklnfdnveqmkkYTESYRGglaDSCWAYAVGTP 146

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  82 DESGKKLVEVARRCRDEAIAACRAGAPFSVIGNTIRcrlvtlkphnssEWFASLStfcgtwdriilswtprnlascflpr 161
Cdd:PRK07281  147 SDEVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQ------------EYAESRG------------------------- 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213 162 lhldLGRPGEVASGGTGNSRCEEKELPvsedsncppawPWQTAqewvgsentdttkanDNDLPMEEGMAFTIEPIITEGS 241
Cdd:PRK07281  190 ----YGVVRDLVGHGVGPTMHEEPMVP-----------NYGTA---------------GRGLRLREGMVLTIEPMINTGT 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1720400213 242 PEFKV-LEDAWTVVSLDNQRSAQFEHTVLITPRGVEILTKLPQE 284
Cdd:PRK07281  240 WEIDTdMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEE 283
MetAP2 cd01088
Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and ...
 29-116 3.29e-06

Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.


Pssm-ID: 238521 [Multi-domain]  Cd Length: 291  Bit Score: 47.63  E-value: 3.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  29 FPKSVctSVNNVLCHGIP---DSRPLQDGDIINIDVTVYYNGYHGDTSETFlvgNVDESGKKLVEVARRCRDEAIAACRA 105
Cdd:cd01088    48 FPVNL--SINECAAHYTPnagDDTVLKEGDVVKLDFGAHVDGYIADSAFTV---DFDPKYDDLLEAAKEALNAAIKEAGP 122

                          90
                  ....*....|.
gi 1720400213 106 GAPFSVIGNTI 116
Cdd:cd01088   123 DVRLGEIGEAI 133
PA2G4-like cd01089
Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family ...
 29-106 7.09e-06

Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.


Pssm-ID: 238522  Cd Length: 228  Bit Score: 46.17  E-value: 7.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  29 FPksVCTSVNNVLCHGIP----DSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDES---GKK--LVEVARRCRDEA 99
Cdd:cd01089    59 FP--TCISVNNCVCHFSPlksdATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETpvtGKKadVIAAAHYALEAA 136


                  ....*..
gi 1720400213 100 IAACRAG 106
Cdd:cd01089   137 LRLLRPG 143
crvDNA_42K TIGR00495
42K curved DNA binding protein; Proteins identified by this model have been identified in a ...
 29-106 1.55e-05

42K curved DNA binding protein; Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. [Unknown function, General]


Pssm-ID: 273105  Cd Length: 390  Bit Score: 45.65  E-value: 1.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213  29 FPksVCTSVNNVLCHGIP----DSRPLQDGDIINIDVTVYYNGYHGDTSETFLVGNVDE---SGKK--LVEVARRCRDEA 99
Cdd:TIGR00495  78 FP--TCISVNNCVGHFSPlksdQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEepvTGRKadVIAAAHLAAEAA 155


                  ....*..
gi 1720400213 100 IAACRAG 106
Cdd:TIGR00495 156 LRLVKPG 162
PRK10879 PRK10879
proline aminopeptidase P II; Provisional
 1-79 1.18e-03

proline aminopeptidase P II; Provisional


Pssm-ID: 182804 [Multi-domain]  Cd Length: 438  Bit Score: 40.09  E-value: 1.18e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720400213   1 MTTEEIDALVHWEIIRHDA-YPSplgygrFPKSVCTSVNNVLCHGIPDSRPLQDGDIINIDVTVYYNGYHGDTSETFLVG 79
Cdd:PRK10879  204 MFEYQLEGEIHHEFNRHGArYPS------YNTIVGSGENGCILHYTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVN 277
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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