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Conserved domains on  [gi|1720398803|ref|XP_030106373|]
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spermine oxidase isoform X17 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Amino_oxidase super family cl38049
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 45-193 1.92e-13

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


The actual alignment was detected with superfamily member pfam01593:

Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 69.06  E-value: 1.92e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  45 EQGFtDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHgNPIYQLAEANGLLEETTDGERSVGRIslyskngvacYL 124
Cdd:pfam01593  12 RAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYT----------VL 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720398803 125 TNRGCRIPKDvveeFSDLYNEVynmtQEFFRHGKPVNAES--QNSVGVFTREKVRNRIRDDPDDTEATKRL 193
Cdd:pfam01593  80 FAGGRRYPGD----FRRVPAGW----EGLLEFGRLLSIPEklRLGLAALASDALDEFDLDDFSLAESLLFL 142
 
Name Accession Description Interval E-value
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 45-193 1.92e-13

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 69.06  E-value: 1.92e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  45 EQGFtDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHgNPIYQLAEANGLLEETTDGERSVGRIslyskngvacYL 124
Cdd:pfam01593  12 RAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYT----------VL 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720398803 125 TNRGCRIPKDvveeFSDLYNEVynmtQEFFRHGKPVNAES--QNSVGVFTREKVRNRIRDDPDDTEATKRL 193
Cdd:pfam01593  80 FAGGRRYPGD----FRRVPAGW----EGLLEFGRLLSIPEklRLGLAALASDALDEFDLDDFSLAESLLFL 142
PLN02676 PLN02676
polyamine oxidase
 25-98 4.64e-11

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 62.04  E-value: 4.64e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720398803  25 PRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHG---NPIYQLAEANGL 98
Cdd:PLN02676   27 PSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAGVSVELGANWVEGVGGpesNPIWELANKLKL 103
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
20-98 1.32e-10

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 60.71  E-value: 1.32e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  20 RRRGQPRVVVIGAglaglaaaralleqGFT-------------DVTVLEASSHIGGRVQSVRLGDT--TFELGATWIHGS 84
Cdd:COG1231     3 RRARGKDVVIVGA--------------GLAglaaarelrkaglDVTVLEARDRVGGRVWTLRFGDDglYAELGAMRIPPS 68

                          90
                  ....*....|....
gi 1720398803  85 HGNpIYQLAEANGL 98
Cdd:COG1231    69 HTN-LLALARELGL 81
 
Name Accession Description Interval E-value
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 45-193 1.92e-13

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 69.06  E-value: 1.92e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  45 EQGFtDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHgNPIYQLAEANGLLEETTDGERSVGRIslyskngvacYL 124
Cdd:pfam01593  12 RAGH-DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQ-PPLLALLKELGLEDRLVLPDPAPFYT----------VL 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720398803 125 TNRGCRIPKDvveeFSDLYNEVynmtQEFFRHGKPVNAES--QNSVGVFTREKVRNRIRDDPDDTEATKRL 193
Cdd:pfam01593  80 FAGGRRYPGD----FRRVPAGW----EGLLEFGRLLSIPEklRLGLAALASDALDEFDLDDFSLAESLLFL 142
PLN02676 PLN02676
polyamine oxidase
 25-98 4.64e-11

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 62.04  E-value: 4.64e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720398803  25 PRVVVIGAGLAGLAAARALLEQGFTDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHG---NPIYQLAEANGL 98
Cdd:PLN02676   27 PSVIIVGAGMSGISAAKTLSEAGIEDILILEATDRIGGRMRKANFAGVSVELGANWVEGVGGpesNPIWELANKLKL 103
PLN02568 PLN02568
polyamine oxidase
 50-107 4.97e-11

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 62.15  E-value: 4.97e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720398803  50 DVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHGNPIYQLAEANGLLEETTDGER 107
Cdd:PLN02568   35 ELTVVEGGDRIGGRINTSEFGGERIEMGATWIHGIGGSPVYKIAQEAGSLESDEPWEC 92
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
20-98 1.32e-10

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 60.71  E-value: 1.32e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  20 RRRGQPRVVVIGAglaglaaaralleqGFT-------------DVTVLEASSHIGGRVQSVRLGDT--TFELGATWIHGS 84
Cdd:COG1231     3 RRARGKDVVIVGA--------------GLAglaaarelrkaglDVTVLEARDRVGGRVWTLRFGDDglYAELGAMRIPPS 68

                          90
                  ....*....|....
gi 1720398803  85 HGNpIYQLAEANGL 98
Cdd:COG1231    69 HTN-LLALARELGL 81
PLN02268 PLN02268
probable polyamine oxidase
 25-150 6.12e-08

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 52.77  E-value: 6.12e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398803  25 PRVVVIGAGLAGLAAARALLEQGFtDVTVLEASSHIGGRVQSvrlgDTTF----ELGATWIHG-SHGNPIYQLAEANGLL 99
Cdd:PLN02268    1 PSVIVIGGGIAGIAAARALHDASF-KVTLLESRDRIGGRVHT----DYSFgfpvDMGASWLHGvCNENPLAPLIGRLGLP 75

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1720398803 100 EETTDGERSVgrisLYSKNGVACYLTNR-GCRIPKDVVEEFSDLYNEVYNMT 150
Cdd:PLN02268   76 LYRTSGDNSV----LYDHDLESYALFDMdGNQVPQELVTKVGETFERILEET 123
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
45-94 6.23e-08

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 48.30  E-value: 6.23e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1720398803  45 EQGFtDVTVLEASSHIGGRVQSVRLGDTTFELGATWIHGSHGNPIYQLAE 94
Cdd:pfam13450  17 KRGF-RVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFHGSDEPNVRDLLD 65
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 50-100 8.97e-06

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 46.00  E-value: 8.97e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1720398803  50 DVTVLEASSHIGGRVQSVRLGDTTFELGATWI-HGSHGNPIYQLAEANGLLE 100
Cdd:COG1233    28 RVTVLEKNDTPGGRARTFERPGFRFDVGPSVLtMPGVLERLFRELGLEDYLE 79
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 50-78 5.98e-03

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 37.52  E-value: 5.98e-03
                          10        20
                  ....*....|....*....|....*....
gi 1720398803  50 DVTVLEASSHIGGRVQSVRLGDTTFELGA 78
Cdd:PRK11883   27 DITLLEASDRLGGKIQTVRKDGFPIELGP 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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