SURP and G-patch domain-containing protein 1 isoform X1 [Mus musculus]
Surp and G-patch domain-containing protein( domain architecture ID 10485244)
protein containing domains Surp, kgd, and G-patch
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
228-279 | 3.77e-18 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. : Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 78.33 E-value: 3.77e-18
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
303-354 | 1.10e-14 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. : Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 68.70 E-value: 1.10e-14
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G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
603-647 | 4.78e-14 | |||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. : Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 66.38 E-value: 4.78e-14
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kgd super family | cl39092 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
335-458 | 1.59e-04 | |||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; The actual alignment was detected with superfamily member PRK12270: Pssm-ID: 476867 [Multi-domain] Cd Length: 1228 Bit Score: 45.27 E-value: 1.59e-04
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Name | Accession | Description | Interval | E-value | |||
Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
228-279 | 3.77e-18 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 78.33 E-value: 3.77e-18
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
227-281 | 1.96e-15 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 70.69 E-value: 1.96e-15
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
303-354 | 1.10e-14 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 68.70 E-value: 1.10e-14
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G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
603-647 | 4.78e-14 | |||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 66.38 E-value: 4.78e-14
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G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
600-646 | 1.39e-13 | |||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 65.26 E-value: 1.39e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
302-356 | 3.84e-13 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 64.15 E-value: 3.84e-13
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
335-458 | 1.59e-04 | |||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.27 E-value: 1.59e-04
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Name | Accession | Description | Interval | E-value | |||
Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
228-279 | 3.77e-18 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 78.33 E-value: 3.77e-18
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
227-281 | 1.96e-15 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 70.69 E-value: 1.96e-15
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Surp | pfam01805 | Surp module; This domain is also known as the SWAP domain. SWAP stands for ... |
303-354 | 1.10e-14 | |||
Surp module; This domain is also known as the SWAP domain. SWAP stands for Suppressor-of-White-APricot. It has been suggested that these domains may be RNA binding. Pssm-ID: 460339 [Multi-domain] Cd Length: 52 Bit Score: 68.70 E-value: 1.10e-14
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G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
603-647 | 4.78e-14 | |||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 66.38 E-value: 4.78e-14
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G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
600-646 | 1.39e-13 | |||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 65.26 E-value: 1.39e-13
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SWAP | smart00648 | Suppressor-of-White-APricot splicing regulator; domain present in regulators which are ... |
302-356 | 3.84e-13 | |||
Suppressor-of-White-APricot splicing regulator; domain present in regulators which are responsible for pre-mRNA splicing processes Pssm-ID: 197818 [Multi-domain] Cd Length: 54 Bit Score: 64.15 E-value: 3.84e-13
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kgd | PRK12270 | multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
335-458 | 1.59e-04 | |||
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.27 E-value: 1.59e-04
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G-patch_2 | pfam12656 | G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ... |
602-632 | 2.07e-04 | |||
G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ATP-dependent DExH-box splicing factor Prp2. As this interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing, it is proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2. Pssm-ID: 432700 [Multi-domain] Cd Length: 61 Bit Score: 39.57 E-value: 2.07e-04
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PRK12323 | PRK12323 | DNA polymerase III subunit gamma/tau; |
355-452 | 1.68e-03 | |||
DNA polymerase III subunit gamma/tau; Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.79 E-value: 1.68e-03
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PRK14951 | PRK14951 | DNA polymerase III subunits gamma and tau; Provisional |
357-452 | 1.87e-03 | |||
DNA polymerase III subunits gamma and tau; Provisional Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 1.87e-03
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PHA03247 | PHA03247 | large tegument protein UL36; Provisional |
366-452 | 6.68e-03 | |||
large tegument protein UL36; Provisional Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.92 E-value: 6.68e-03
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Blast search parameters | ||||
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