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Conserved domains on  [gi|1207178090|ref|XP_021332573|]
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DBF4-type zinc finger-containing protein 2 isoform X1 [Danio rerio]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-DBF super family cl47977
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 41-64 1.72e-05

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


The actual alignment was detected with superfamily member pfam07535:

Pssm-ID: 462197  Cd Length: 42  Bit Score: 42.49  E-value: 1.72e-05
                          10        20
                  ....*....|....*....|....
gi 1207178090  41 GYCSCCQVLYNSVEQHILSAQHRE 64
Cdd:pfam07535   1 GYCENCRVKYEDLEEHIVSEKHRK 24
 
Name Accession Description Interval E-value
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 41-64 1.72e-05

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 42.49  E-value: 1.72e-05
                          10        20
                  ....*....|....*....|....
gi 1207178090  41 GYCSCCQVLYNSVEQHILSAQHRE 64
Cdd:pfam07535   1 GYCENCRVKYEDLEEHIVSEKHRK 24
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
41-63 4.21e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 39.00  E-value: 4.21e-04
                           10        20
                   ....*....|....*....|...
gi 1207178090   41 GYCSCCQVLYNSVEQHILSAQHR 63
Cdd:smart00586   6 GYCENCREKYDDLETHLLSEKHR 28
 
Name Accession Description Interval E-value
zf-DBF pfam07535
DBF zinc finger; This domain is predicted to bind metal ions and is often found associated ...
 41-64 1.72e-05

DBF zinc finger; This domain is predicted to bind metal ions and is often found associated with pfam00533 and pfam02178. It was first identified in the Drosophila chiffon gene product, and is associated with initiation of DNA replication.


Pssm-ID: 462197  Cd Length: 42  Bit Score: 42.49  E-value: 1.72e-05
                          10        20
                  ....*....|....*....|....
gi 1207178090  41 GYCSCCQVLYNSVEQHILSAQHRE 64
Cdd:pfam07535   1 GYCENCRVKYEDLEEHIVSEKHRK 24
ZnF_DBF smart00586
Zinc finger in DBF-like proteins;
41-63 4.21e-04

Zinc finger in DBF-like proteins;


Pssm-ID: 128854 [Multi-domain]  Cd Length: 49  Bit Score: 39.00  E-value: 4.21e-04
                           10        20
                   ....*....|....*....|...
gi 1207178090   41 GYCSCCQVLYNSVEQHILSAQHR 63
Cdd:smart00586   6 GYCENCREKYDDLETHLLSEKHR 28
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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