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Conserved domains on  [gi|672044781|ref|XP_008759842|]
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G-protein-signaling modulator 1 isoform X3 [Rattus norvegicus]

Protein Classification

GoLoco domain-containing protein( domain architecture ID 10490271)

GoLoco domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GoLoco pfam02188
GoLoco motif;
48-69 1.16e-06

GoLoco motif;


:

Pssm-ID: 460481  Cd Length: 22  Bit Score: 43.56  E-value: 1.16e-06
                          10        20
                  ....*....|....*....|..
gi 672044781   48 ECFFDLLSKFQSSRMDDQRCPL 69
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
101-121 6.07e-05

GoLoco motif;


:

Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.07e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  101 EEFFDLIASSQSRRLDDQRAS 121
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
GoLoco pfam02188
GoLoco motif;
183-204 6.38e-05

GoLoco motif;


:

Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.38e-05
                          10        20
                  ....*....|....*....|..
gi 672044781  183 EDFFSLIQRVQAKRMDEQRVDL 204
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
149-169 6.91e-05

GoLoco motif;


:

Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.56  E-value: 6.91e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  149 DEFFNMLIKYQSSRIDDQRCP 169
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
 
Name Accession Description Interval E-value
GoLoco pfam02188
GoLoco motif;
48-69 1.16e-06

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 43.56  E-value: 1.16e-06
                          10        20
                  ....*....|....*....|..
gi 672044781   48 ECFFDLLSKFQSSRMDDQRCPL 69
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
101-121 6.07e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.07e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  101 EEFFDLIASSQSRRLDDQRAS 121
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
GoLoco pfam02188
GoLoco motif;
183-204 6.38e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.38e-05
                          10        20
                  ....*....|....*....|..
gi 672044781  183 EDFFSLIQRVQAKRMDEQRVDL 204
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
149-169 6.91e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.56  E-value: 6.91e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  149 DEFFNMLIKYQSSRIDDQRCP 169
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 47-69 7.54e-05

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 38.64  E-value: 7.54e-05
                           10        20
                   ....*....|....*....|...
gi 672044781    47 EECFFDLLSKFQSSRMDDQRCPL 69
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 148-170 7.85e-05

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 38.64  E-value: 7.85e-05
                           10        20
                   ....*....|....*....|...
gi 672044781   148 GDEFFNMLIKYQSSRIDDQRCPP 170
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 100-122 1.45e-04

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 37.87  E-value: 1.45e-04
                           10        20
                   ....*....|....*....|...
gi 672044781   100 TEEFFDLIASSQSRRLDDQRASV 122
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 182-204 4.26e-04

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 36.71  E-value: 4.26e-04
                           10        20
                   ....*....|....*....|...
gi 672044781   182 DEDFFSLIQRVQAKRMDEQRVDL 204
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
 
Name Accession Description Interval E-value
GoLoco pfam02188
GoLoco motif;
48-69 1.16e-06

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 43.56  E-value: 1.16e-06
                          10        20
                  ....*....|....*....|..
gi 672044781   48 ECFFDLLSKFQSSRMDDQRCPL 69
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
101-121 6.07e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.07e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  101 EEFFDLIASSQSRRLDDQRAS 121
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
GoLoco pfam02188
GoLoco motif;
183-204 6.38e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.94  E-value: 6.38e-05
                          10        20
                  ....*....|....*....|..
gi 672044781  183 EDFFSLIQRVQAKRMDEQRVDL 204
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCSL 22
GoLoco pfam02188
GoLoco motif;
149-169 6.91e-05

GoLoco motif;


Pssm-ID: 460481  Cd Length: 22  Bit Score: 38.56  E-value: 6.91e-05
                          10        20
                  ....*....|....*....|.
gi 672044781  149 DEFFNMLIKYQSSRIDDQRCP 169
Cdd:pfam02188   1 EDFFDLLARVQSSRLDDQRCS 21
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 47-69 7.54e-05

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 38.64  E-value: 7.54e-05
                           10        20
                   ....*....|....*....|...
gi 672044781    47 EECFFDLLSKFQSSRMDDQRCPL 69
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 148-170 7.85e-05

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 38.64  E-value: 7.85e-05
                           10        20
                   ....*....|....*....|...
gi 672044781   148 GDEFFNMLIKYQSSRIDDQRCPP 170
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 100-122 1.45e-04

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 37.87  E-value: 1.45e-04
                           10        20
                   ....*....|....*....|...
gi 672044781   100 TEEFFDLIASSQSRRLDDQRASV 122
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
GoLoco smart00390
LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins
 182-204 4.26e-04

LGN motif, putative GEFs specific for G-alpha GTPases; GEF specific for Galpha_i proteins


Pssm-ID: 214645  Cd Length: 23  Bit Score: 36.71  E-value: 4.26e-04
                           10        20
                   ....*....|....*....|...
gi 672044781   182 DEDFFSLIQRVQAKRMDEQRVDL 204
Cdd:smart00390   1 DEDLFDLLLRMQSSRMDDQRCEL 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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