|
Name |
Accession |
Description |
Interval |
E-value |
| CHAT |
pfam12770 |
CHAT domain; These proteins appear to be related to peptidases in peptidase clan CD that ... |
1272-1595 |
1.97e-54 |
|
CHAT domain; These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.
Pssm-ID: 432771 [Multi-domain] Cd Length: 287 Bit Score: 192.59 E-value: 1.97e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1272 KPPLRALYDLLIAPMEGGLMHSSGPVgrhRQLVLVLEGELYFVPFALLKGSaSNEYLYERFTLIAVPAVRSLgphskchL 1351
Cdd:pfam12770 1 QKLARALYDLLIAPLLALLLADQQGI---RRLVIVPDGALNLLPFEALVDP-DGRYLLERYAISYAPSLRDL-------S 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1352 RKTPPTYSSSTTMAAVIGNPKLPsavmDRWLWGPMPSAEEEAFMVSELLGC---QPLVGSMATKERVMSAL-TQAECVHF 1427
Cdd:pfam12770 70 RTRRAAIQARRALQLVVGNPDFD----RALSFPPLPGAEAEAEAIAELLGAgglVVLLGEDATEEALKEALrQRYDVVHF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1428 ATHVSWKL-----SALVLTPNTEGNpagskssfghpytipeslrvqDDASDVESISDcpplrellltaadlldLRLS-VK 1501
Cdd:pfam12770 146 ATHGVFLPnpplrSGLALAPENSRE---------------------DGLLTARELAE----------------LNLTgAE 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1502 LVVLSSSQEANG-RVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASLGEAMKVVQSSKA 1580
Cdd:pfam12770 189 LVVLSACETGLGeISGGEGVIGLARAFLLAGAPSVIASLWPVDDRATALLMKAFYQNLLQGLSKAEALRQAQLALLRGKR 268
|
330
....*....|....*....
gi 568935438 1581 ----FSHPSNWAGFTLIGS 1595
Cdd:pfam12770 269 rekpRHHPYYWAGFVLVGD 287
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
829-1595 |
5.12e-36 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 148.19 E-value: 5.12e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 829 AHELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI 908
Cdd:COG4995 11 AALLAALALALLALALLLLLAALAAAALLLLALLALLLALAAAAAAALAAAALALALLAAAALALLLLALALAALALALL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 909 AEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRL 988
Cdd:COG4995 91 AAALALALAAAALAALALLAALLALAAAAALLALLAALALLALLAALAAALAAAAAAALAAALAAAAAAAAAAALLALAL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 989 AEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDlqtssYQALQRVLVSLGHHD 1068
Cdd:COG4995 171 ALAAAALALLALLLAALAAALAAAAAALALLLALLLLAALAAALAAALAALLLALLALAA-----ALLALLLLALLALAA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1069 EALAVAERGRTRAFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLG 1148
Cdd:COG4995 246 AAAALAAAAAALLALAAALLLLAALAALAAAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLAALLL 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1149 DNSVESSSDFQAGSSAALPVATNSTLEQHIASVREALGVESYYSRACASSETESEAGDIMEQQLEEMNKQLNSVTDPTGF 1228
Cdd:COG4995 326 LLAALALLALLLLLAAAALLAAALAAALALAAALALALLAALLLLLAALLALLLEALLLLLLALLAALLLLAAALLALAA 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1229 LRMVRHNNLLHRSCQSmTSLFSGTVSPSKDGTSSLPRRQNSLAkppLRALYDLLIAPMEGGLmhssgpvGRHRQLVLVLE 1308
Cdd:COG4995 406 AQLLRLLLAALALLLA-LAAYAAARLALLALIEYIILPDRLYA---FVQLYQLLIAPIEAEL-------PGIKRLVIVPD 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1309 GELYFVPFALLKgSASNEYLYERFTLIAVPAVRSLGPHSKCHLRKTPPtysssttmAAVIGNPKLPSAvmdrwlWGPMPS 1388
Cdd:COG4995 475 GALRLLPFAALP-DGKGQYLIERYAISYAPSLSLLRARPRPPLPAGLR--------VLAVGNPDFSRG------LPPLPG 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1389 AEEEAFMVSELL-GCQPLVGSMATKERVMSALTQAECVHFATHvswklsALVLtpntEGNPAGSkssfghpytipeSLRV 1467
Cdd:COG4995 540 AEAEVEAIAALLpGGTVLLGEEATEAALLAALPGYRILHLATH------GLFD----PDNPLRS------------GLLL 597
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1468 QDD---ASDVESISDCPPlrellltaadlldlrlsvKLVVLSSSQEANGRV-TADGLVALTRAFLAAGAQCVLVALWPVP 1543
Cdd:COG4995 598 ADGlltAYELAQLDLSPA------------------ELVVLSACETGLGDVrGGEGVLGLARAFLYAGARSVVASLWSVD 659
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 568935438 1544 VAASKMFVHAFYSSLLNGLKASASLGEAMKVVQSSKAFSHPSNWAGFTLIGS 1595
Cdd:COG4995 660 DEATAALMTEFYRNLAQGKSKAEALRQAQLALLKGSPYSHPYYWAAFVLIGN 711
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
397-656 |
1.03e-27 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 113.95 E-value: 1.03e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 397 RAYGNMGNAYNALGMYDQAVKYHRQELQISmevndrASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELrdiqseA 476
Cdd:COG0457 9 EAYNNLGLAYRRLGRYEEAIEDYEKALELD------PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD------A 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 477 RALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLhdklsqA 556
Cdd:COG0457 77 EALNNLGLALQALGRYEEALEDYDKALELDPDDAE------ALYNLGLALLELGRYDEAIEAYERALELDPDD------A 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 557 KAYCNLGLAFKALLNFAKAEEC-QKYLLSLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLSHHVKDRRLE 635
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELlEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLL 224
|
250 260
....*....|....*....|.
gi 568935438 636 ASAYAALGTAYRMVQKYDKAL 656
Cdd:COG0457 225 LALALLLALRLAALALYQYRA 245
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
757-1019 |
1.67e-25 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 107.79 E-value: 1.67e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 757 DRGRAYGNLGDCYEALGDYEEAIKYYEqylsvaQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHELgeAS 836
Cdd:COG0457 6 DDAEAYNNLGLAYRRLGRYEEAIEDYE------KALELDPDDAEALYNLGLAYLRLGRYEEALADYEQ----ALEL--DP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 837 NKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETdnpt 916
Cdd:COG0457 74 DDAEALNNLGLALQALGRYEEALEDYDKALELDPD------DAEALYNLGLALLELGRYDEAIEAYERALELDPDD---- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 917 cqGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRRE 996
Cdd:COG0457 144 --ADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAE 221
|
250 260
....*....|....*....|...
gi 568935438 997 DEAKIRHGLGLSLWASGNLEEAQ 1019
Cdd:COG0457 222 LLLLALALLLALRLAALALYQYR 244
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
673-882 |
1.22e-22 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 99.31 E-value: 1.22e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 673 PGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKlkepslEAQVYGNMGITKMNMNVMEDAIGYFEQQLAMlqqlsgn 752
Cdd:COG0457 5 PDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPD------DAEALYNLGLAYLRLGRYEEALADYEQALEL------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 753 esVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAqslnrmQDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHEL 832
Cdd:COG0457 72 --DPDDAEALNNLGLALQALGRYEEALEDYDKALELD------PDDAEALYNLGLALLELGRYDEAIEAYER----ALEL 139
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 568935438 833 geASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAA 882
Cdd:COG0457 140 --DPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAA 187
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
309-602 |
2.90e-22 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 98.16 E-value: 2.90e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 309 LMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQqlgiaedlkdraaegrassnlgiihqmkgdydtALKLHKTHlciaqe 388
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEK---------------------------------ALELDPDD------ 41
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 389 lsdyaaqGRAYGNMGNAYNALGMYDQAVKYHRQELQIsmevndRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARE 468
Cdd:COG0457 42 -------AEALYNLGLAYLRLGRYEEALADYEQALEL------DPDDAEALNNLGLALQALGRYEEALEDYDKALELDPD 108
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 469 LrdiqseARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD 548
Cdd:COG0457 109 D------AEALYNLGLALLELGRYDEAIEAYERALELDPDDAD------ALYNLGIALEKLGRYEEALELLEKLEAAALA 176
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 568935438 549 LHDKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALGNL 602
Cdd:COG0457 177 ALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALL 230
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
475-717 |
5.09e-22 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 97.38 E-value: 5.09e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 475 EARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDlqdmegEGKVCHNLGYAHYCLGNYQEAVKYYEQdlALAKDLHDkls 554
Cdd:COG0457 7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPD------DAEALYNLGLAYLRLGRYEEALADYEQ--ALELDPDD--- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 555 qAKAYCNLGLAFKALLNFAKAEECqkyllsLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLSHHVkdrrl 634
Cdd:COG0457 76 -AEALNNLGLALQALGRYEEALED------YDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDD----- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 635 eASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDLpgECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSL 714
Cdd:COG0457 144 -ADALYNLGIALEKLGRYEEALELLEKLEAAALAALLA--AALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALA 220
|
...
gi 568935438 715 EAQ 717
Cdd:COG0457 221 ELL 223
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
635-882 |
1.29e-21 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 96.23 E-value: 1.29e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 635 EASAYAALGTAYRMVQKYDKALGYHTQELEVYqelsdlPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLkepsl 714
Cdd:COG0457 7 DAEAYNNLGLAYRRLGRYEEAIEDYEKALELD------PDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD----- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 715 eAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQQLSgnesvldrgRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQslnr 794
Cdd:COG0457 76 -AEALNNLGLALQALGRYEEALEDYDKALELDPDDA---------EALYNLGLALLELGRYDEAIEAYERALELDP---- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 795 mqDQAKAYRGLGNGHRATGSLQQALVCFEKRLvvAHELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKD 874
Cdd:COG0457 142 --DDADALYNLGIALEKLGRYEEALELLEKLE--AAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLA 217
|
....*...
gi 568935438 875 RALESDAA 882
Cdd:COG0457 218 ALAELLLL 225
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
398-704 |
1.97e-21 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 96.72 E-value: 1.97e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 398 AYGNMGNAYNAL--GMYDQAVKYHRQELQISmevndrASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARElrdiqsE 475
Cdd:COG2956 8 ALGWYFKGLNYLlnGQPDKAIDLLEEALELD------PETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD------R 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 476 ARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQ 555
Cdd:COG2956 76 AEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAE------ALRLLAEIYEQEGDWEKAIEVLERLLKLGPE------N 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 556 AKAYCNLGLAFKALLNFAKAEECqkyllsLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlE 635
Cdd:COG2956 144 AHAYCELAELYLEQGDYDEAIEA------LEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPD------Y 211
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568935438 636 ASAYAALGTAYRMVQKYDKAlgyhtqeLEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLE 704
Cdd:COG2956 212 LPALPRLAELYEKLGDPEEA-------LELLRKALELDPSDDLLLALADLLERKEGLEAALALLERQLR 273
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
636-987 |
4.00e-21 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 95.57 E-value: 4.00e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 636 ASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDlpgecrAHGHLAAVYMALGKYTMAFKCYQEQLELGRklkepsle 715
Cdd:COG2956 8 ALGWYFKGLNYLLNGQPDKAIDLLEEALELDPETVE------AHLALGNLYRRRGEYDRAIRIHQKLLERDP-------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 716 aqvygnmgitkmnmnvmedaigyfeqqlamlqqlsgnesvlDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQslnrm 795
Cdd:COG2956 74 -----------------------------------------DRAEALLELAQDYLKAGLLDRAEELLEKLLELDP----- 107
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 796 qDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvahELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMkdr 875
Cdd:COG2956 108 -DDAEALRLLAEIYEQEGDWEKAIEVLER------LLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDC--- 177
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 876 aleSDAACGLGGVYQQMGEYDTALQYhqldLQIAEETDNPTCQgrAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDL 955
Cdd:COG2956 178 ---ARALLLLAELYLEQGDYEEAIAA----LERALEQDPDYLP--ALPRLAELYEKLGDPEEALELLRKALELDPSDDLL 248
|
330 340 350
....*....|....*....|....*....|..
gi 568935438 956 VAktvsyssLGRTHHALQNYSQAVMYLQEGLR 987
Cdd:COG2956 249 LA-------LADLLERKEGLEAALALLERQLR 273
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
232-479 |
4.25e-21 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 94.69 E-value: 4.25e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 232 DLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIakdlgsKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELaqelme 311
Cdd:COG0457 4 DPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALEL------DPDDAEALYNLGLAYLRLGRYEEALADYEQALEL------ 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 312 KPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLkdraaeGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSD 391
Cdd:COG0457 72 DPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDD------AEALYNLGLALLELGRYDEAIEAYERALELDPDDAD 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 392 yaaqgrAYGNMGNAYNALGMYDQAVKYHRQELQIsmEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRD 471
Cdd:COG0457 146 ------ALYNLGIALEKLGRYEEALELLEKLEAA--ALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLA 217
|
....*...
gi 568935438 472 IQSEARAL 479
Cdd:COG0457 218 ALAELLLL 225
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
522-819 |
8.04e-21 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 94.80 E-value: 8.04e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 522 LGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLGLAFKALLNFAKAEEcqkYLLSLaqsLDNSQAKFRALGN 601
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDPE------TVEAHLALGNLYRRRGEYDRAIR---IHQKL---LERDPDRAEALLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 602 LGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALgyhtqelEVYQELSDL-PGECRAHG 680
Cdd:COG2956 82 LAQDYLKAGLLDRAEELLEKLLELDPD------DAEALRLLAEIYEQEGDWEKAI-------EVLERLLKLgPENAHAYC 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 681 HLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLE-AQVYgnmgitkMNMNVMEDAIGYFEQqlaMLQQLSGNESVLDRg 759
Cdd:COG2956 149 ELAELYLEQGDYDEAIEALEKALKLDPDCARALLLlAELY-------LEQGDYEEAIAALER---ALEQDPDYLPALPR- 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 760 raygnLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQAL 819
Cdd:COG2956 218 -----LAELYEKLGDPEEALELLRKALELDPSDDLLLALADLLERKEGLEAALALLERQL 272
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
198-457 |
4.85e-20 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 91.61 E-value: 4.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 198 ALSSLGHVYTAIGDYPNALASHKQCVLLakqskdDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAKDLgskreeAR 277
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALEL------DPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDD------AE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 278 AYSNLGSAYHYRRNFDKAMSYHNCVLELaqelmeKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDraaegr 357
Cdd:COG0457 78 ALNNLGLALQALGRYEEALEDYDKALEL------DPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDAD------ 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 358 ASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQAS 437
Cdd:COG0457 146 ALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLL 225
|
250 260
....*....|....*....|
gi 568935438 438 THGNLAVAYQALGAHDRALQ 457
Cdd:COG0457 226 ALALLLALRLAALALYQYRA 245
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
765-1064 |
6.48e-20 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 92.10 E-value: 6.48e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 765 LGDCYEALGDYEEAIKYYEQYLSVAQslnrmqDQAKAYRGLGNGHRATGSLQQALVCFEKRLvvahelGEASNKAQAYGE 844
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDP------ETVEAHLALGNLYRRRGEYDRAIRIHQKLL------ERDPDRAEALLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 845 LGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQYHQldlQIAEETDNPTcqgRAYGN 924
Cdd:COG2956 82 LAQDYLKAGLLDRAEELLEKLLELDPD------DAEALRLLAEIYEQEGDWEKAIEVLE---RLLKLGPENA---HAYCE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 925 LGLTYESLGTFERAVVYQEQHLSIAAqmNDLVAktvsYSSLGRTHHALQNYSQAVMYLQEGLRLAeqlgrrEDEAKIRHG 1004
Cdd:COG2956 150 LAELYLEQGDYDEAIEALEKALKLDP--DCARA----LLLLAELYLEQGDYEEAIAALERALEQD------PDYLPALPR 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1005 LGLSLWASGNLEEAQHQLYRAsalfetIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSL 1064
Cdd:COG2956 218 LAELYEKLGDPEEALELLRKA------LELDPSDDLLLALADLLERKEGLEAALALLERQ 271
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
442-744 |
1.08e-19 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 91.71 E-value: 1.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 442 LAVAYQALGAHDRALQHYQNHLNIARElrdiqsEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDlqdmegEGKVCHN 521
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDPE------TVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 522 LGYAHYCLGNYQEAVKYYEQdlALAKDLHDklsqAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQslDNSQAKFRalgn 601
Cdd:COG2956 82 LAQDYLKAGLLDRAEELLEK--LLELDPDD----AEALRLLAEIYEQEGDWEKAIEVLERLLKLGP--ENAHAYCE---- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 602 LGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKAlgyhtqeLEVYQELSDL-PGECRAHG 680
Cdd:COG2956 150 LAELYLEQGDYDEAIEALEKALKLDPD------CARALLLLAELYLEQGDYEEA-------IAALERALEQdPDYLPALP 216
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 681 HLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYgnmgitkMNMNVMEDAIGYFEQQLA 744
Cdd:COG2956 217 RLAELYEKLGDPEEALELLRKALELDPSDDLLLALADLL-------ERKEGLEAALALLERQLR 273
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
157-415 |
1.27e-19 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 90.45 E-value: 1.27e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 157 RAHGNLGSAFFSKGNYREALTNHRHqlvlAMKLKDREAasSALSSLGHVYTAIGDYPNALASHKQCVLLakqskdDLSEA 236
Cdd:COG0457 9 EAYNNLGLAYRRLGRYEEAIEDYEK----ALELDPDDA--EALYNLGLAYLRLGRYEEALADYEQALEL------DPDDA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 237 RELGNMGAVYIAMGDFENAVQCHEQHLRIAKDLgskreeARAYSNLGSAYHYRRNFDKAMSYHNCVLELaqelmeKPIEM 316
Cdd:COG0457 77 EALNNLGLALQALGRYEEALEDYDKALELDPDD------AEALYNLGLALLELGRYDEAIEAYERALEL------DPDDA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 317 RAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQG 396
Cdd:COG0457 145 DALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLL 224
|
250
....*....|....*....
gi 568935438 397 RAYGNMGNAYNALGMYDQA 415
Cdd:COG0457 225 LALALLLALRLAALALYQY 243
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
602-901 |
3.10e-19 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 90.17 E-value: 3.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 602 LGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSdlpgecRAHGH 681
Cdd:COG2956 14 KGLNYLLNGQPDKAIDLLEEALELDPE------TVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRA------EALLE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 682 LAAVYMALGKYTMAFKCYQEQLELGRKlkepslEAQVYGNMGITKMNMNVMEDAIGYFEQqlamLQQLSGNESvldrgRA 761
Cdd:COG2956 82 LAQDYLKAGLLDRAEELLEKLLELDPD------DAEALRLLAEIYEQEGDWEKAIEVLER----LLKLGPENA-----HA 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 762 YGNLGDCYEALGDYEEAIKYYEQYLSVAQslnrmqDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHElgeasnKAQA 841
Cdd:COG2956 147 YCELAELYLEQGDYDEAIEALEKALKLDP------DCARALLLLAELYLEQGDYEEAIAALERALEQDPD------YLPA 214
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 842 YGELGSLHSQLGNYEQAISCLERQLNIARDmkdraleSDAACGLGGVYQQMGEYDTALQY 901
Cdd:COG2956 215 LPRLAELYEKLGDPEEALELLRKALELDPS-------DDLLLALADLLERKEGLEAALAL 267
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
9-819 |
3.12e-19 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 95.15 E-value: 3.12e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 9 KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQLQKmKLDKSPFvVVSVVGQEL 88
Cdd:TIGR02917 194 DALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHADALLK-KAPNSPL-AHYLKALVD 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 89 LTAGHHGASVVVLEAALKIGTCSLKlrgSVFSAlSSAHWSLGNTEKSTGYMQQ------DLDVAKTLgdqtgecrahgnL 162
Cdd:TIGR02917 272 FQKKNYEDARETLQDALKSAPEYLP---ALLLA-GASEYQLGNLEQAYQYLNQilkyapNSHQARRL------------L 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 163 GSAFFSKGNYREALTnhrhQLVLAMKLKDREAAssALSSLGHVYTAIGDYPNALAshkqcvLLAKQSKDDLSEARELGNM 242
Cdd:TIGR02917 336 ASIQLRLGRVDEAIA----TLSPALGLDPDDPA--ALSLLGEAYLALGDFEKAAE------YLAKATELDPENAAARTQL 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 243 GAVYIAMGDFENAVQCHEQHLRIAKDLGskreeaRAYSNLGSAYHYRRNFDKAMSyhncvleLAQELMEK------PIEM 316
Cdd:TIGR02917 404 GISKLSQGDPSEAIADLETAAQLDPELG------RADLLLILSYLRSGQFDKALA-------AAKKLEKKqpdnasLHNL 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 317 RAYAGLGHaarcmQDLERAKQYHEQQLGIAEDlkdraaEGRASSNLGIIHQMKGD-------YDTALKLHKTHLCIAQEL 389
Cdd:TIGR02917 471 LGAIYLGK-----GDLAKAREAFEKALSIEPD------FFPAAANLARIDIQEGNpddaiqrFEKVLTIDPKNLRAILAL 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 390 SDYAAQgraygnMGNAYNALGMYDQAVKYHRQELQISMevndrasqasthgNLAVAYQALGAHDRALQhyqnhlnIAREL 469
Cdd:TIGR02917 540 AGLYLR------TGNEEEAVAWLEKAAELNPQEIEPAL-------------ALAQYYLGKGQLKKALA-------ILNEA 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 470 RDIQ-SEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDlqdmegEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD 548
Cdd:TIGR02917 594 ADAApDSPEAWLMLGRAQLAAGDLNKAVSSFKKLLALQPD------SALALLLLADAYAVMKNYAKAITSLKRALELKPD 667
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 549 lHDKLSQAKAycnlglafkallNFAKAEECQKYLLSLAQSLDNSQAKfRALGN--LGDIFICKKDINGAIKFYEQQLgls 626
Cdd:TIGR02917 668 -NTEAQIGLA------------QLLLAAKRTESAKKIAKSLQKQHPK-AALGFelEGDLYLRQKDYPAAIQAYRKAL--- 730
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 627 hhvkdrRLEASAYAA--LGTAYRMVQKYDKALgyhtQELEVYqeLSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLE 704
Cdd:TIGR02917 731 ------KRAPSSQNAikLHRALLASGNTAEAV----KTLEAW--LKTHPNDAVLRTALAELYLAQKDYDKAIKHYQTVVK 798
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 705 lgrklKEPSlEAQVYGNMGITKMNMNVMEdAIGYFEQQlamLQQLSGNESVLDrgraygNLGDCYEALGDYEEAIKYYEQ 784
Cdd:TIGR02917 799 -----KAPD-NAVVLNNLAWLYLELKDPR-ALEYAERA---LKLAPNIPAILD------TLGWLLVEKGEADRALPLLRK 862
|
810 820 830
....*....|....*....|....*....|....*.
gi 568935438 785 YLSVAQSLNRMQ-DQAKAYRGLGNGHRATGSLQQAL 819
Cdd:TIGR02917 863 AVNIAPEAAAIRyHLALALLATGRKAEARKELDKLL 898
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
293-561 |
3.95e-19 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 94.29 E-value: 3.95e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 293 DKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLG----IAEDLKDRAAEGRASSNLGIIHQM 368
Cdd:COG3914 11 ALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALaageAAAAAAALLLLAALLELAALLLQA 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 369 KGDYDTALklhkTHLCIAQELS-DYAAqgrAYGNMGNAYNALGMYDQAVKYHRQELQIsmevndRASQASTHGNLAVAYQ 447
Cdd:COG3914 91 LGRYEEAL----ALYRRALALNpDNAE---ALFNLGNLLLALGRLEEALAALRRALAL------NPDFAEAYLNLGEALR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 448 ALGAHDRALQHYQNHLNIARELrdiqseARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHY 527
Cdd:COG3914 158 RLGRLEEAIAALRRALELDPDN------AEALNNLGNALQDLGRLEEAIAAYRRALELDPDNAD------AHSNLLFALR 225
|
250 260 270
....*....|....*....|....*....|....
gi 568935438 528 CLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCN 561
Cdd:COG3914 226 QACDWEVYDRFEELLAALARGPSELSPFALLYLP 259
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
166-1032 |
5.69e-18 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 91.30 E-value: 5.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 166 FFSKGNYREALTnhrhQLVLAMKLKDREAASSALssLGHVYTAIGDYPNALASHKQCVLL---AKQSKDDLSEArelgnm 242
Cdd:TIGR02917 32 YLQKNKYKAAII----QLKNALQKDPNDAEARFL--LGKIYLALGDYAAAEKELRKALSLgypKNQVLPLLARA------ 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 243 gavYIAMGDFENAVQCHEqhlriAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYhncvLELAQELMEKpiemRAYAGL 322
Cdd:TIGR02917 100 ---YLLQGKFQQVLDELP-----GKTLLDDEGAAELLALRGLAYLGLGQLELAQKS----YEQALAIDPR----SLYAKL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 323 GHAarcmQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKThlciAQELSDYAAQGRAygNM 402
Cdd:TIGR02917 164 GLA----QLALAENRFDEARALIDEVLTADPGNVDALLLKGDLLLSLGNIELALAAYRK----AIALRPNNIAVLL--AL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 403 GNAYNALGMYDQAVKYHRQELQISmevndrASQASTHGNLA-VAYQAlGAHDRALQHYQNHLNIARElrdiQSEARALSN 481
Cdd:TIGR02917 234 ATILIEAGEFEEAEKHADALLKKA------PNSPLAHYLKAlVDFQK-KNYEDARETLQDALKSAPE----YLPALLLAG 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 482 LGNFHcsRGEYVQAAPYYEQYLRLAPdlqdmegegkvchNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQ-AKAYC 560
Cdd:TIGR02917 303 ASEYQ--LGNLEQAYQYLNQILKYAP-------------NSHQARRLLASIQLRLGRVDEAIATLSPALGLDPDdPAALS 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 561 NLGLAFKALLNFAKAEEcqkyLLSLAQSLDNSQAKFRAlgNLGDIFICKKDINGAIKFYEQQLGLSHHVKDRRLeasaya 640
Cdd:TIGR02917 368 LLGEAYLALGDFEKAAE----YLAKATELDPENAAART--QLGISKLSQGDPSEAIADLETAAQLDPELGRADL------ 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 641 ALGTAYRMVQKYDKALGYHTQELEVYqelsdlPGECRAHGHLAAVYMALGKYTMAfkcyQEQLELGRKLKEPSLEAQVY- 719
Cdd:TIGR02917 436 LLILSYLRSGQFDKALAAAKKLEKKQ------PDNASLHNLLGAIYLGKGDLAKA----REAFEKALSIEPDFFPAAANl 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 720 GNMGITKMNmnvMEDAIGYFE-------------QQLAMLQQLSGNES--VLDRGRAYGNLGDCYE---ALGDYEEAIKY 781
Cdd:TIGR02917 506 ARIDIQEGN---PDDAIQRFEkvltidpknlraiLALAGLYLRTGNEEeaVAWLEKAAELNPQEIEpalALAQYYLGKGQ 582
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 782 YEQYLSVAQSLNRMQ-DQAKAYRGLGNGHRATGSLQQALVCFEKRlvvaheLGEASNKAQAYGELGSLHSQLGNYEQAIS 860
Cdd:TIGR02917 583 LKKALAILNEAADAApDSPEAWLMLGRAQLAAGDLNKAVSSFKKL------LALQPDSALALLLLADAYAVMKNYAKAIT 656
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 861 CLERQLNIARDMkdraleSDAACGLGGVYQQMGEYDTALQ-YHQLDLQIAEEtdnptcqgrAYGN--LGLTYESLGTFER 937
Cdd:TIGR02917 657 SLKRALELKPDN------TEAQIGLAQLLLAAKRTESAKKiAKSLQKQHPKA---------ALGFelEGDLYLRQKDYPA 721
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 938 AVVYQEQHLSIAAQmNDLVAKtvsyssLGRTHHALQNYSQAVMylqeglRLAEQLGRREDEAKIRHGLglslwasGNLEE 1017
Cdd:TIGR02917 722 AIQAYRKALKRAPS-SQNAIK------LHRALLASGNTAEAVK------TLEAWLKTHPNDAVLRTAL-------AELYL 781
|
890
....*....|....*
gi 568935438 1018 AQHQLYRASALFETI 1032
Cdd:TIGR02917 782 AQKDYDKAIKHYQTV 796
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
274-544 |
1.80e-17 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 85.17 E-value: 1.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 274 EEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQElmekpiEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDra 353
Cdd:COG2956 40 ETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAE-- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 354 aegrASSNLGIIHQMKGDYDTALKLHKThlciAQELSDYAAQgrAYGNMGNAYNALGMYDQAVKYhrqeLQISMEVNDRA 433
Cdd:COG2956 112 ----ALRLLAEIYEQEGDWEKAIEVLER----LLKLGPENAH--AYCELAELYLEQGDYDEAIEA----LEKALKLDPDC 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 434 SQASThgNLAVAYQALGAHDRALQHYQNHLNIARELrdiqseARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDME 513
Cdd:COG2956 178 ARALL--LLAELYLEQGDYEEAIAALERALEQDPDY------LPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLL 249
|
250 260 270
....*....|....*....|....*....|.
gi 568935438 514 gegkvchNLGYAHYCLGNYQEAVKYYEQDLA 544
Cdd:COG2956 250 -------ALADLLERKEGLEAALALLERQLR 273
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
241-504 |
2.41e-17 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 84.78 E-value: 2.41e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 241 NMGAVYIAMGDFENAVQCHEQHLRIAKDlgskreEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAqelmekPIEMRAYA 320
Cdd:COG2956 47 ALGNLYRRRGEYDRAIRIHQKLLERDPD------RAEALLELAQDYLKAGLLDRAEELLEKLLELD------PDDAEALR 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 321 GLGHAARCMQDLERAKQYHEQQLGIAEDlkdraaEGRASSNLGIIHQMKGDYDTALKLhkthlcIAQELSDYAAQGRAYG 400
Cdd:COG2956 115 LLAEIYEQEGDWEKAIEVLERLLKLGPE------NAHAYCELAELYLEQGDYDEAIEA------LEKALKLDPDCARALL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 401 NMGNAYNALGMYDQAVKYHRQELQISMEvndrasQASTHGNLAVAYQALGAHDRALQHYQNHLniarelrDIQSEARALS 480
Cdd:COG2956 183 LLAELYLEQGDYEEAIAALERALEQDPD------YLPALPRLAELYEKLGDPEEALELLRKAL-------ELDPSDDLLL 249
|
250 260
....*....|....*....|....
gi 568935438 481 NLGNFHCSRGEYVQAAPYYEQYLR 504
Cdd:COG2956 250 ALADLLERKEGLEAALALLERQLR 273
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
880-1150 |
1.85e-15 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 78.51 E-value: 1.85e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 880 DAACGLGGVYQQMGEYDTALQYHQLDLQIAEEtdnptcQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMndlvakT 959
Cdd:COG0457 9 EAYNNLGLAYRRLGRYEEAIEDYEKALELDPD------DAEALYNLGLAYLRLGRYEEALADYEQALELDPDD------A 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 960 VSYSSLGRTHHALQNYSQAVMYLQEGLRLaeqlgrREDEAKIRHGLGLSLWASGNLEEAQHQLYRAsalfetirheaqls 1039
Cdd:COG0457 77 EALNNLGLALQALGRYEEALEDYDKALEL------DPDDAEALYNLGLALLELGRYDEAIEAYERA-------------- 136
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1040 tdykLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVL 1119
Cdd:COG0457 137 ----LELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLA 212
|
250 260 270
....*....|....*....|....*....|.
gi 568935438 1120 YYSLAAGYLYSWLLAPGAGILKFHEHYLGDN 1150
Cdd:COG0457 213 ILTLAALAELLLLALALLLALRLAALALYQY 243
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
158-424 |
1.88e-15 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 79.00 E-value: 1.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 158 AHGNLGSAFFSKGNYREALTNHRHqlvlAMKLKDREAAssALSSLGHVYTAIGDYPNALASHKQCVllakQSKDDLSEAR 237
Cdd:COG2956 44 AHLALGNLYRRRGEYDRAIRIHQK----LLERDPDRAE--ALLELAQDYLKAGLLDRAEELLEKLL----ELDPDDAEAL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 238 ELgnMGAVYIAMGDFENAVQCHEQHLRIAKdlgskrEEARAYSNLGSAYHYRRNFDKAMSYhncvLELAQELmeKPIEMR 317
Cdd:COG2956 114 RL--LAEIYEQEGDWEKAIEVLERLLKLGP------ENAHAYCELAELYLEQGDYDEAIEA----LEKALKL--DPDCAR 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 318 AYAGLGHAARCMQDLERAKQYHEQQLGIAEDLkdraaeGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGR 397
Cdd:COG2956 180 ALLLLAELYLEQGDYEEAIAALERALEQDPDY------LPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALAD 253
|
250 260
....*....|....*....|....*..
gi 568935438 398 aygnmgnAYNALGMYDQAVKYHRQELQ 424
Cdd:COG2956 254 -------LLERKEGLEAALALLERQLR 273
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
186-869 |
4.23e-15 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 81.67 E-value: 4.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 186 AMKLKDR-----EAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSearelgNMGAVYIAMGDFENAvqchE 260
Cdd:TIGR02917 178 ARALIDEvltadPGNVDALLLKGDLLLSLGNIELALAAYRKAIALRPNNIAVLL------ALATILIEAGEFEEA----E 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 261 QHLRIAKdlgskreeARAYSNLGSAY-----HYRR-NFDKAMSYHNCVLELAQELMEkpieMRAYAGLGHAARcmQDLER 334
Cdd:TIGR02917 248 KHADALL--------KKAPNSPLAHYlkalvDFQKkNYEDARETLQDALKSAPEYLP----ALLLAGASEYQL--GNLEQ 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 335 AKQYHEQQLGIAEDLkDRAAEGRASSNLgiihqMKGDYDTALklhkTHLCIAQELSDYAAQgrAYGNMGNAYNALGMYDQ 414
Cdd:TIGR02917 314 AYQYLNQILKYAPNS-HQARRLLASIQL-----RLGRVDEAI----ATLSPALGLDPDDPA--ALSLLGEAYLALGDFEK 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 415 AVKY-------------HRQELQISMEVNDRASQASTHGNLAVAYQALGAHDR---ALQHYQNH-----LNIARELRDIQ 473
Cdd:TIGR02917 382 AAEYlakateldpenaaARTQLGISKLSQGDPSEAIADLETAAQLDPELGRADlllILSYLRSGqfdkaLAAAKKLEKKQ 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 474 SEARALSNL-GNFHCSRGEYVQAAPYYEQYLRLAPDlqdmegEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALA---KDL 549
Cdd:TIGR02917 462 PDNASLHNLlGAIYLGKGDLAKAREAFEKALSIEPD------FFPAAANLARIDIQEGNPDDAIQRFEKVLTIDpknLRA 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 550 HDKLSQAKAYCN--------LGLAFKA-------LLNFAKAEECQKYL---LSLAQS-LDNSQAKFRALGNLGDIFICKK 610
Cdd:TIGR02917 536 ILALAGLYLRTGneeeavawLEKAAELnpqeiepALALAQYYLGKGQLkkaLAILNEaADAAPDSPEAWLMLGRAQLAAG 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 611 DINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGYHTQELEVYqelsdlPGECRAHGHLAAVYMALG 690
Cdd:TIGR02917 616 DLNKAVSSFKKLLALQPD------SALALLLLADAYAVMKNYAKAITSLKRALELK------PDNTEAQIGLAQLLLAAK 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 691 KYTMAFKCYQEQLELGRKLKE-PSLEAQVYgnmgitkMNMNVMEDAIGYFEQ------------QLAMLQQLSGN----- 752
Cdd:TIGR02917 684 RTESAKKIAKSLQKQHPKAALgFELEGDLY-------LRQKDYPAAIQAYRKalkrapssqnaiKLHRALLASGNtaeav 756
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 753 ---ESVLDR----GRAYGNLGDCYEALGDYEEAIKYYEQYLSVAqslnrmQDQAKAYRGLgnghratgslqqALVCFEKR 825
Cdd:TIGR02917 757 ktlEAWLKThpndAVLRTALAELYLAQKDYDKAIKHYQTVVKKA------PDNAVVLNNL------------AWLYLELK 818
|
730 740 750 760
....*....|....*....|....*....|....*....|....*....
gi 568935438 826 LVVAHELGE-----ASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIA 869
Cdd:TIGR02917 819 DPRALEYAEralklAPNIPAILDTLGWLLVEKGEADRALPLLRKAVNIA 867
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
122-376 |
8.29e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 73.50 E-value: 8.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 122 LSSAHWSLGNTEKSTGYMQQDLDVAKTLGDqtgecrAHGNLGSAFFSKGNYREALTNHRHqlvlAMKLKDREAAssALSS 201
Cdd:COG0457 14 LGLAYRRLGRYEEAIEDYEKALELDPDDAE------ALYNLGLAYLRLGRYEEALADYEQ----ALELDPDDAE--ALNN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 202 LGHVYTAIGDYPNALASHKQcvllAKQSKDDLSEAreLGNMGAVYIAMGDFENAVQCHEQHLRIAKDLgskreeARAYSN 281
Cdd:COG0457 82 LGLALQALGRYEEALEDYDK----ALELDPDDAEA--LYNLGLALLELGRYDEAIEAYERALELDPDD------ADALYN 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 282 LGSAYHYRRNFDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSN 361
Cdd:COG0457 150 LGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALAL 229
|
250
....*....|....*
gi 568935438 362 LGIIHQMKGDYDTAL 376
Cdd:COG0457 230 LLALRLAALALYQYR 244
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
414-621 |
2.63e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 75.41 E-value: 2.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 414 QAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQ---SEARALSNLGNFHCSRG 490
Cdd:COG3914 13 AAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAallLLAALLELAALLLQALG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 491 EYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLhdklsqAKAYCNLGLAFKALL 570
Cdd:COG3914 93 RYEEALALYRRALALNPDNAE------ALFNLGNLLLALGRLEEALAALRRALALNPDF------AEAYLNLGEALRRLG 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568935438 571 NFAKAEECqkYLLSLAQSLDNSQakfrALGNLGDIFICKKDINGAIKFYEQ 621
Cdd:COG3914 161 RLEEAIAA--LRRALELDPDNAE----ALNNLGNALQDLGRLEEAIAAYRR 205
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
619-786 |
4.55e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 74.64 E-value: 4.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 619 YEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDL-PGECRAHGHLAAVYMALGKYTMAFK 697
Cdd:COG3914 54 AAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALnPDNAEALFNLGNLLLALGRLEEALA 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 698 CYQEQLELgrklkEPSLeAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLqqlsgnesvLDRGRAYGNLGDCYEALGDYEE 777
Cdd:COG3914 134 ALRRALAL-----NPDF-AEAYLNLGEALRRLGRLEEAIAALRRALELD---------PDNAEALNNLGNALQDLGRLEE 198
|
....*....
gi 568935438 778 AIKYYEQYL 786
Cdd:COG3914 199 AIAAYRRAL 207
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
631-922 |
5.68e-13 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 74.64 E-value: 5.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 631 DRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELgrklk 710
Cdd:COG3914 33 EAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALAL----- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 711 EPsleaqvygnmgitkmnmnvmedaigyfeqqlamlqqlsgnesvlDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAq 790
Cdd:COG3914 108 NP--------------------------------------------DNAEALFNLGNLLLALGRLEEALAALRRALALN- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 791 slnrmQDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHELgeASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAR 870
Cdd:COG3914 143 -----PDFAEAYLNLGEALRRLGRLEEAIAALRR----ALEL--DPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDP 211
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 568935438 871 DmkdralESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETDNPTCQGRAY 922
Cdd:COG3914 212 D------NADAHSNLLFALRQACDWEVYDRFEELLAALARGPSELSPFALLY 257
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
442-713 |
1.05e-12 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 73.49 E-value: 1.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 442 LAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHN 521
Cdd:COG3914 4 AALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLEL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 522 LGYAHYCLGNYQEAVKYYEQDLALAKDLHDklsqakAYCNLGLAFKALLNFAKAEECqkYLLSLAQSLDNSQakfrALGN 601
Cdd:COG3914 84 AALLLQALGRYEEALALYRRALALNPDNAE------ALFNLGNLLLALGRLEEALAA--LRRALALNPDFAE----AYLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 602 LGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKAlgyhtqeLEVYQELSDL-PGECRAHG 680
Cdd:COG3914 152 LGEALRRLGRLEEAIAALRRALELDPD------NAEALNNLGNALQDLGRLEEA-------IAAYRRALELdPDNADAHS 218
|
250 260 270
....*....|....*....|....*....|...
gi 568935438 681 HLAAVYMALGKYTMAFKCYQEQLELGRKLKEPS 713
Cdd:COG3914 219 NLLFALRQACDWEVYDRFEELLAALARGPSELS 251
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
636-787 |
1.66e-11 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 64.06 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 636 ASAYAALGTAYRMVQKYDKALgyhtqelEVYQELSDL-PGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKlkepsl 714
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAE-------ALLEKALELdPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPD------ 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 715 EAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQqlsgnesvlDRGRAYGNLGDCYEALGDYEEAIKYYEQYLS 787
Cdd:COG4783 71 EPEARLNLGLALLKAGDYDEALALLEKALKLDP---------EHPEAYLRLARAYRALGRPDEAIAALEKALE 134
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
386-548 |
1.04e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 61.75 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 386 AQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQIsmevndrasqastHGNLAVAYQALGAHDRALQHYQNhlni 465
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEA-------------FALLGEILLQLGDLDEAIVLLHE---- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 466 ARELRdiQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDlqdmegEGKVCHNLGYAHYCLGNYQEAVKYYEQDLAL 545
Cdd:COG4783 64 ALELD--PDEPEARLNLGLALLKAGDYDEALALLEKALKLDPE------HPEAYLRLARAYRALGRPDEAIAALEKALEL 135
|
...
gi 568935438 546 AKD 548
Cdd:COG4783 136 DPD 138
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
716-791 |
1.46e-10 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 59.32 E-value: 1.46e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 716 AQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQQLSGNESvLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQS 791
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDH-PLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
765-911 |
1.84e-10 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 60.98 E-value: 1.84e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 765 LGDCYEALGDYEEAIKYYEQYLSVAQslnrmqDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHELgeASNKAQAYGE 844
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDP------DNPEAFALLGEILLQLGDLDEAIVLLHE----ALEL--DPDEPEARLN 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 845 LGSLHSQLGNYEQAISCLERQLNIARDMkdraleSDAACGLGGVYQQMGEYDTALQYHQLDLQIAEE 911
Cdd:COG4783 78 LGLALLKAGDYDEALALLEKALKLDPEH------PEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
386-547 |
2.41e-10 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 61.13 E-value: 2.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 386 AQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNI 465
Cdd:COG5010 4 LEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 466 ARElrdiqsEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLAL 545
Cdd:COG5010 84 DPN------NPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPN------AYSNLAALLLSLGQDDEAKAALQRALGT 151
|
..
gi 568935438 546 AK 547
Cdd:COG5010 152 SP 153
|
|
| TPR_MalT |
pfam17874 |
MalT-like TPR region; This entry contains a series of TPR repeats. |
727-1030 |
2.56e-10 |
|
MalT-like TPR region; This entry contains a series of TPR repeats.
Pssm-ID: 436107 [Multi-domain] Cd Length: 336 Bit Score: 64.64 E-value: 2.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 727 MNMNVMEDAIGYFEQQLAMLQqlsgNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLG 806
Cdd:pfam17874 12 ISKGDAERALELAEQALALLP----EDDLLARGLATFVLGEAYLCLGDLDAALQAMREAEALARRADSPHVTLWALLQQG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 807 NGHRATGSLQQALVCFEKRLVVAHELGEASNKAQ--AYGELGSLHSQLGNYEQAISCLERQLNIARDMK-DRALESDAAc 883
Cdd:pfam17874 88 EILRAQGRLHQALETYQQALQLARDHGLQHLPLHgfLLVGLADLLYEWNDLEEAEQHAQQGIQLGRQWEpDAAVDAYVL- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 884 gLGGVYQQMGEYDTALQYhqldLQIAEETDNPT------------CQGRAY---GNLGLTYESLGTFERAV----VYQEQ 944
Cdd:pfam17874 167 -LARIALAQGELEEALTL----LRRAELLARQSffhvdwlanaerVRVRLWlarGDLRAAVRWLRAAEPPSdadnHFLER 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 945 HLSIAAqmndlvaktvsysslgRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYR 1024
Cdd:pfam17874 242 ELRNLA----------------RVLLALGRFDDALSLLERLQNLAEQLGRVRSLIENLILQALALLALGRPDEALQALLD 305
|
....*.
gi 568935438 1025 ASALFE 1030
Cdd:pfam17874 306 ALSLAE 311
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
757-879 |
4.48e-10 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 59.63 E-value: 4.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 757 DRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQslnrmqDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHelgeas 836
Cdd:COG4235 15 NDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDP------DNADALLDLAEALLAAGDTEEAEELLERALALDP------ 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 568935438 837 NKAQAYGELGSLHSQLGNYEQAISCLERQLNIA-RDMKDRALES 879
Cdd:COG4235 83 DNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLpADAPARLLEA 126
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
445-551 |
1.03e-09 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 57.49 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 445 AYQALGAHDRALQHYQNHLNIARElrdiqsEARALSNLGNFHCSRGEYVQAAPYyEQYLRLAPDlqdmegEGKVCHNLGY 524
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIAL-EKALKLDPN------NAEALLNLAE 67
|
90 100
....*....|....*....|....*..
gi 568935438 525 AHYCLGNYQEAVKYYEQDLALAKDLHD 551
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSALR 94
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
353-508 |
1.16e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 58.66 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 353 AAEGRASSNLGIIHQMKGDYDTALKLHKthlciaQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYhrqeLQISMEVNDR 432
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLE------KALELDPDNPEAFALLGEILLQLGDLDEAIVL----LHEALELDPD 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 433 ASQAstHGNLAVAYQALGAHDRALQHYQnhlniaRELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:COG4783 71 EPEA--RLNLGLALLKAGDYDEALALLE------KALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
687-1137 |
1.26e-09 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 64.11 E-value: 1.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 687 MALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMNMNVMEDAIGYFEQQL-AMLQQLSGNESVLDR---GRAY 762
Cdd:COG3899 716 LARGAYAEALRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALaARALAALAALRHGNPpasARAY 795
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 763 GNLGDCYeaLGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAY 842
Cdd:COG3899 796 ANLGLLL--LGDYEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLAL 873
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 843 GELGSLHSQLGNYEQAISCLERQLNIARDM------KDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETDNPT 916
Cdd:COG3899 874 AAAAAAAAAAAALAAAAAAAARLLAAAAAAlaaaaaAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAA 953
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 917 CQGRAYGNLGLTYESLgTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRRE 996
Cdd:COG3899 954 LAAALALAAAAAAAAA-AALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAA 1032
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 997 DEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAER 1076
Cdd:COG3899 1033 AAALLAAAAALALLAALAAAAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALA 1112
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568935438 1077 GRTRAFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGA 1137
Cdd:COG3899 1113 ALALAAALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALALLLLALAALALAA 1173
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
829-1028 |
1.46e-09 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 63.47 E-value: 1.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 829 AHELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI 908
Cdd:COG3914 28 LAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 909 aeetdNPTCqGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLvaktvsYSSLGRTHHALQNYSQAVMYLQEGLRL 988
Cdd:COG3914 108 -----NPDN-AEALFNLGNLLLALGRLEEALAALRRALALNPDFAEA------YLNLGEALRRLGRLEEAIAALRRALEL 175
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 568935438 989 AEqlgrreDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL 1028
Cdd:COG3914 176 DP------DNAEALNNLGNALQDLGRLEEAIAAYRRALEL 209
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
397-468 |
1.78e-09 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 56.24 E-value: 1.78e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 397 RAYGNMGNAYNALGMYDQAVKYHRQELQISMEV--NDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARE 468
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
839-911 |
2.85e-09 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 55.47 E-value: 2.85e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 839 AQAYGELGSLHSQLGNYEQAISCLERQLNIARD--MKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEE 911
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRllGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
133-382 |
3.08e-09 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 62.32 E-value: 3.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 133 EKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAmklkdrEAASSALSSLGHVYTAIGDY 212
Cdd:COG3914 55 AAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALN------PDNAEALFNLGNLLLALGRL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 213 PNALASHKQCVLLakqsKDDLSEAreLGNMGAVYIAMGDFENAVQCHEQHLRIAKDLgskreeARAYSNLGSAYHYRRNF 292
Cdd:COG3914 129 EEALAALRRALAL----NPDFAEA--YLNLGEALRRLGRLEEAIAALRRALELDPDN------AEALNNLGNALQDLGRL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 293 DKAMSYHNCVLELAQELmekpiemraYAGLGHAARCMQDLERAKQYHEQQlgiaEDLKDRAAEGRASSNLGIIHQMKGDY 372
Cdd:COG3914 197 EEAIAAYRRALELDPDN---------ADAHSNLLFALRQACDWEVYDRFE----ELLAALARGPSELSPFALLYLPDDDP 263
|
250
....*....|
gi 568935438 373 DTALKLHKTH 382
Cdd:COG3914 264 AELLALARAW 273
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
431-577 |
3.16e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 58.05 E-value: 3.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 431 DRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDlq 510
Cdd:COG5010 9 RLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPN-- 86
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 511 dmegEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLGLAFKALLNFAKAEE 577
Cdd:COG5010 87 ----NPELYYNLALLYSRSGDKDEAKEYYEKALALSPD------NPNAYSNLAALLLSLGQDDEAKA 143
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
431-1028 |
3.95e-09 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 62.18 E-value: 3.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 431 DRASQASTHGNLAVAYQALGAHDRALQHYQ--NHLNIARELRDIqseARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:COG3899 661 PPEERRALHRRIARALEARGPEPLEERLFElaHHLNRAGERDRA---ARLLLRAARRALARGAYAEALRYLERALELLPP 737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 509 LQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLAL-------AKDLHDKLSQAKAYCNLGLAFkaLLNFAKAEECQKY 581
Cdd:COG3899 738 DPEEEYRLALLLELAEALYLAGRFEEAEALLERALAAralaalaALRHGNPPASARAYANLGLLL--LGDYEEAYEFGEL 815
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 582 LLSLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQkyDKALGYHTQ 661
Cdd:COG3899 816 ALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAA--ALAAAAAAA 893
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 662 ELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQvygnmgitkmnmnvmEDAIGYFEQ 741
Cdd:COG3899 894 ARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAA---------------AAAALAAAL 958
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 742 QLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVC 821
Cdd:COG3899 959 ALAAAAAAAAAAALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLA 1038
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 822 FEKRLVVAHELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQY 901
Cdd:COG3899 1039 AAAALALLAALAAAAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAA 1118
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 902 HQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVyQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMY 981
Cdd:COG3899 1119 ALAALALAAAARAAAALLLLAAALALALAALLLLAALLL-ALALLLLALAALALAAALAALAAALLAAAAAAAAAAALLA 1197
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 568935438 982 LQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL 1028
Cdd:COG3899 1198 ALLALAARLAALLALALLALEAAALLLLLLLAALALAAALLALRLLA 1244
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
836-989 |
4.24e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 57.12 E-value: 4.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 836 SNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQ-YHQLdlqIAEETDN 914
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPD------NPEAFALLGEILLQLGDLDEAIVlLHEA---LELDPDE 71
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 915 PtcqgRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLvaktvsYSSLGRTHHALQNYSQAVMYLQEGLRLA 989
Cdd:COG4783 72 P----EARLNLGLALLKAGDYDEALALLEKALKLDPEHPEA------YLRLARAYRALGRPDEAIAALEKALELD 136
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
239-308 |
5.93e-09 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 54.70 E-value: 5.93e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568935438 239 LGNMGAVYIAMGDFENAVQCHEQHLRIAKDLGSKR--EEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE 308
Cdd:pfam13424 6 LNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDhpLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
434-508 |
6.94e-09 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 54.32 E-value: 6.94e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 434 SQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSE--ARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:pfam13424 1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPltATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
405-511 |
7.42e-09 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 54.79 E-value: 7.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 405 AYNALGMYDQAVKYHRQELQISmevndrASQASTHGNLAVAYQALGAHDRALQhYQNHLNIARElrdiqsEARALSNLGN 484
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELD------PDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPN------NAEALLNLAE 67
|
90 100
....*....|....*....|....*..
gi 568935438 485 FHCSRGEYVQAAPYYEQYLRLAPDLQD 511
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSALR 94
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
248-506 |
1.27e-08 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 60.64 E-value: 1.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 248 AMGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLEL-------AQELMEKPIEMRAYA 320
Cdd:COG3899 717 ARGAYAEALRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAAralaalaALRHGNPPASARAYA 796
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 321 GLGHAARcmQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYG 400
Cdd:COG3899 797 NLGLLLL--GDYEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALA 874
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 401 nMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALS 480
Cdd:COG3899 875 -AAAAAAAAAAALAAAAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAA 953
|
250 260
....*....|....*....|....*.
gi 568935438 481 NLGNFHCSRGEYVQAAPYYEQYLRLA 506
Cdd:COG3899 954 LAAALALAAAAAAAAAAALAAAAAAA 979
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
191-467 |
2.06e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 59.62 E-value: 2.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 191 DREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAKDlg 270
Cdd:COG3914 33 EAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPD-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 271 skreEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEkpiemrAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLk 350
Cdd:COG3914 111 ----NAEALFNLGNLLLALGRLEEALAALRRALALNPDFAE------AYLNLGEALRRLGRLEEAIAALRRALELDPDN- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 351 draAEgrASSNLGIIHQMKGDYDTALKlhktHLCIAQELSdyAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQIsmevn 430
Cdd:COG3914 180 ---AE--ALNNLGNALQDLGRLEEAIA----AYRRALELD--PDNADAHSNLLFALRQACDWEVYDRFEELLAAL----- 243
|
250 260 270
....*....|....*....|....*....|....*..
gi 568935438 431 drASQASTHGNLAVAYQalgAHDRALQHYQNHLNIAR 467
Cdd:COG3914 244 --ARGPSELSPFALLYL---PDDDPAELLALARAWAQ 275
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
11-283 |
2.14e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 57.82 E-value: 2.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 11 YFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQLqkMKLDKSPFVVVSVVGQELLT 90
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKL--LERDPDRAEALLELAQDYLK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 91 AGHHGASVVVLEAALKIGtcslKLRGSVFSALSSAHWSLGNTEKStgymqqdLDVAKTLGDQTGEC-RAHGNLGSAFFSK 169
Cdd:COG2956 89 AGLLDRAEELLEKLLELD----PDDAEALRLLAEIYEQEGDWEKA-------IEVLERLLKLGPENaHAYCELAELYLEQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 170 GNYREALTNhrhqlvLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQcvlLAKQSKDDLSEARELGNmgaVYIAM 249
Cdd:COG2956 158 GDYDEAIEA------LEKALKLDPDCARALLLLAELYLEQGDYEEAIAALER---ALEQDPDYLPALPRLAE---LYEKL 225
|
250 260 270
....*....|....*....|....*....|....
gi 568935438 250 GDFENAVQCHEQHLRIAKDLGSKREEARAYSNLG 283
Cdd:COG2956 226 GDPEEALELLRKALELDPSDDLLLALADLLERKE 259
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
262-556 |
2.21e-08 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 59.87 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 262 HLRIAKDlgskREEARAYsNLGSAYHYRRN--FDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYH 339
Cdd:COG3899 694 HLNRAGE----RDRAARL-LLRAARRALARgaYAEALRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALL 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 340 EQQLGI-------AEDLKDRAAEGRASSNLGIIhqMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMY 412
Cdd:COG3899 769 ERALAAralaalaALRHGNPPASARAYANLGLL--LLGDYEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPL 846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 413 DQAVKYHRQELQISMEVNDRA------SQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFH 486
Cdd:COG3899 847 REALELLREALEAGLETGDAAlallalAAAAAAAAAAAALAAAAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAA 926
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 487 CSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQA 556
Cdd:COG3899 927 AAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAAAAALEAAAA 996
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
195-268 |
2.31e-08 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 53.16 E-value: 2.31e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 195 ASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQS--KDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAKD 268
Cdd:pfam13424 2 VATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
274-428 |
2.33e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 54.81 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 274 EEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAqelmekPIEMRAYAGLGHAARCMQDLERA-KQYHEQqlgiaedLKDR 352
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELD------PDNPEAFALLGEILLQLGDLDEAiVLLHEA-------LELD 68
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 353 AAEGRASSNLGIIHQMKGDYDTALKLhkthlcIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME 428
Cdd:COG4783 69 PDEPEARLNLGLALLKAGDYDEALAL------LEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
768-871 |
2.74e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 53.25 E-value: 2.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 768 CYEALGDYEEAIKYYEQylsvaqSLNRMQDQAKAYRGLGNGHRATGSLQQALVcFEKrlvvAHELgeASNKAQAYGELGS 847
Cdd:COG3063 1 LYLKLGDLEEAEEYYEK------ALELDPDNADALNNLGLLLLEQGRYDEAIA-LEK----ALKL--DPNNAEALLNLAE 67
|
90 100
....*....|....*....|....
gi 568935438 848 LHSQLGNYEQAISCLERQLNIARD 871
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPS 91
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
716-872 |
3.06e-08 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 54.43 E-value: 3.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 716 AQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQqlsgnesvlDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQslnrm 795
Cdd:COG4783 4 AEALYALAQALLLAGDYDEAEALLEKALELDP---------DNPEAFALLGEILLQLGDLDEAIVLLHEALELDP----- 69
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 796 qDQAKAYRGLGNGHRATGSLQQALVCFEKRLvvahelGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDM 872
Cdd:COG4783 70 -DEPEARLNLGLALLKAGDYDEALALLEKAL------KLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
839-1076 |
4.28e-08 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 58.47 E-value: 4.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 839 AQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLggvYQQMGEYDTALQYHQLDLQIAEETDNPTCQ 918
Cdd:COG3914 1 AAAAALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLL---LAALAEAAAAALLALAAGEAAAAAAALLLL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 919 GRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDlvaktvSYSSLGRTHHALQNYSQAVMYLQEGLRLAEqlgrreDE 998
Cdd:COG3914 78 AALLELAALLLQALGRYEEALALYRRALALNPDNAE------ALFNLGNLLLALGRLEEALAALRRALALNP------DF 145
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568935438 999 AKIRHGLGLSLWASGNLEEAQHQLYRASALFETiRHEAqlstdyklslfdlqtssYQALQRVLVSLGHHDEALAVAER 1076
Cdd:COG3914 146 AEAYLNLGEALRRLGRLEEAIAALRRALELDPD-NAEA-----------------LNNLGNALQDLGRLEEAIAAYRR 205
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
357-425 |
9.35e-08 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 51.23 E-value: 9.35e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568935438 357 RASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL--SDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQI 425
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALAL 74
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
757-871 |
9.63e-08 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 51.23 E-value: 9.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 757 DRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLnrmqdqakayrgLGNGHRATgslqqalvcfekrlvvahelgeas 836
Cdd:pfam13424 1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRL------------LGPDHPLT------------------------ 44
|
90 100 110
....*....|....*....|....*....|....*
gi 568935438 837 nkAQAYGELGSLHSQLGNYEQAISCLERQLNIARD 871
Cdd:pfam13424 45 --ATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
667-789 |
1.09e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 52.70 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 667 QELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELgrklkEPSlEAQVYGNMGITKMNMNVMEDAIGYFEQqlaML 746
Cdd:COG4235 8 QALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRL-----DPD-NADALLDLAEALLAAGDTEEAEELLER---AL 78
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568935438 747 QQLSGNEsvldrgRAYGNLGDCYEALGDYEEAIKYYEQYLSVA 789
Cdd:COG4235 79 ALDPDNP------EALYLLGLAAFQQGDYAEAIAAWQKLLALL 115
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
396-508 |
1.26e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 52.70 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 396 GRAYGNMGNAYNALGMYDQAVKYHRQELQISmevndrASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARElrdiqsE 475
Cdd:COG4235 17 AEGWLLLGRAYLRLGRYDEALAAYEKALRLD------PDNADALLDLAEALLAAGDTEEAEELLERALALDPD------N 84
|
90 100 110
....*....|....*....|....*....|...
gi 568935438 476 ARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:COG4235 85 PEALYLLGLAAFQQGDYAEAIAAWQKLLALLPA 117
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
627-786 |
1.63e-07 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 53.04 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 627 HHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELG 706
Cdd:COG5010 5 EGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLD 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 707 RKlkepslEAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQQLSgnesvldrgRAYGNLGDCYEALGDYEEAIKYYEQYL 786
Cdd:COG5010 85 PN------NPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNP---------NAYSNLAALLLSLGQDDEAKAALQRAL 149
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
554-705 |
1.63e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.50 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 554 SQAKAYCNLGLAFKALLNFAKAEEcqkyllSLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLSHHvkdrr 633
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEA------LLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPD----- 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568935438 634 lEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDlpgecrAHGHLAAVYMALGKYTMAFKCYQEQLEL 705
Cdd:COG4783 71 -EPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPE------AYLRLARAYRALGRPDEAIAALEKALEL 135
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
682-826 |
2.27e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 52.12 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 682 LAAVYMALGKYTMAFKCYQEQLELgrklkEPSlEAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQqlsgnesvlDRGRA 761
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALEL-----DPD-NPEAFALLGEILLQLGDLDEAIVLLHEALELDP---------DEPEA 74
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 762 YGNLGDCYEALGDYEEAIKYYEQYLSvaqslnRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRL 826
Cdd:COG4783 75 RLNLGLALLKAGDYDEALALLEKALK------LDPEHPEAYLRLARAYRALGRPDEAIAALEKAL 133
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
414-546 |
2.94e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 51.55 E-value: 2.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 414 QAVKYHRQELQismevnDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARElrdiqsEARALSNLGNFHCSRGEYV 493
Cdd:COG4235 1 EAIARLRQALA------ANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPD------NADALLDLAEALLAAGDTE 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568935438 494 QAAPYYEQYLRLAPDlqdmegEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALA 546
Cdd:COG4235 69 EAEELLERALALDPD------NPEALYLLGLAAFQQGDYAEAIAAWQKLLALL 115
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
411-645 |
4.70e-07 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 53.00 E-value: 4.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 411 MYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSE-------ARALSNLG 483
Cdd:COG4785 1 LYALALALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRalalpdlAQLYYERG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 484 NFHCSRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLG 563
Cdd:COG4785 81 VAYDSLGDYDLAIADFDQALELDPDLAE------AYNNRGLAYLLLGDYDAALEDFDRALELDPD------YAYAYLNRG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 564 LAFKALLNFAKAEEcqkyLLSLAQSLDNSQAkFRALgnLGDIFICKKDINGAIKFYEQQLGLSHHVKDRRLEASAYAALG 643
Cdd:COG4785 149 IALYYLGRYELAIA----DLEKALELDPNDP-ERAL--WLYLAERKLDPEKALALLLEDWATAYLLQGDTEEARELFKLA 221
|
..
gi 568935438 644 TA 645
Cdd:COG4785 222 LA 223
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
522-668 |
4.90e-07 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 50.96 E-value: 4.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 522 LGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLGLAFKALLNFAKAEEcqkyllSLAQSLDNSQAKFRALGN 601
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDPD------NPEAFALLGEILLQLGDLDEAIV------LLHEALELDPDEPEARLN 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 602 LGDIFICKKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGYHTQELEVYQE 668
Cdd:COG4783 78 LGLALLKAGDYDEALALLEKALKLDPE------HPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
172-506 |
6.71e-07 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 54.86 E-value: 6.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 172 YREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYiaMGD 251
Cdd:COG3899 728 LERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLL--LGD 805
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 252 FENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQD 331
Cdd:COG3899 806 YEEAYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAA 885
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 332 LERAKQYHEQQLGIAE------DLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNA 405
Cdd:COG3899 886 LAAAAAAAARLLAAAAaalaaaAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAA 965
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 406 YNALGmYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNF 485
Cdd:COG3899 966 AAAAA-ALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALA 1044
|
330 340
....*....|....*....|.
gi 568935438 486 HCSRGEYVQAAPYYEQYLRLA 506
Cdd:COG3899 1045 LLAALAAAAAAAAAAAALAAA 1065
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
463-626 |
9.81e-07 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 50.73 E-value: 9.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 463 LNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQD 542
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 543 LALAKDlhdklsQAKAYCNLGLAFKALLNFAKAEEcqkyLLSLAQSLDNSQAkfRALGNLGDIFICKKDINGAIKFYEQQ 622
Cdd:COG5010 81 LQLDPN------NPELYYNLALLYSRSGDKDEAKE----YYEKALALSPDNP--NAYSNLAALLLSLGQDDEAKAALQRA 148
|
....
gi 568935438 623 LGLS 626
Cdd:COG5010 149 LGTS 152
|
|
| PRK02603 |
PRK02603 |
photosystem I assembly protein Ycf3; Provisional |
398-508 |
1.15e-06 |
|
photosystem I assembly protein Ycf3; Provisional
Pssm-ID: 179448 [Multi-domain] Cd Length: 172 Bit Score: 50.83 E-value: 1.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 398 AYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASqasTHGNLAVAYQALGAHDRALQHYQNHLNIARELrdiqseAR 477
Cdd:PRK02603 37 VYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSY---ILYNMGIIYASNGEHDKALEYYHQALELNPKQ------PS 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 568935438 478 ALSNLGNFHCSRGE--------------YVQAAPYYEQYLRLAPD 508
Cdd:PRK02603 108 ALNNIAVIYHKRGEkaeeagdqdeaealFDKAAEYWKQAIRLAPN 152
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
848-950 |
1.19e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 48.63 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 848 LHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQYHQLdlqIAEETDNPtcqgRAYGNLGL 927
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALEKA---LKLDPNNA----EALLNLAE 67
|
90 100
....*....|....*....|...
gi 568935438 928 TYESLGTFERAVVYQEQHLSIAA 950
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDP 90
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
183-346 |
1.26e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 50.34 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 183 LVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIAMGDFENAVQCHEQH 262
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 263 LRIAKDlgskreEARAYSNLGSAYHYRRNFDKAMSYhncvLELAQELmeKPIEMRAYAGLGHAARCMQDLERAKQYHEQQ 342
Cdd:COG5010 81 LQLDPN------NPELYYNLALLYSRSGDKDEAKEY----YEKALAL--SPDNPNAYSNLAALLLSLGQDDEAKAALQRA 148
|
....
gi 568935438 343 LGIA 346
Cdd:COG5010 149 LGTS 152
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
881-951 |
1.31e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 48.15 E-value: 1.31e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 881 AACGLGGVYQQMGEYDTALQYHQLDLQIAEETDNPT--CQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQ 951
Cdd:pfam13424 5 ALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDhpLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
1931-2315 |
1.70e-06 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 53.52 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1931 ASKEEEEYEGFSIISMEPLATYQ--GEGKTRFSPDPKQPCVKAPGgvrlsvsskgSVSTPNSPVKMTLIPSPNSPFQKVG 2008
Cdd:PHA03377 519 TTEEEESVTQPAKPHRKVQDGFQrsGRRQKRATPPKVSPSDRGPP----------KASPPVMAPPSTGPRVMATPSTGPR 588
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2009 KLASSDTGESDQSSTETDSTVKSQEESTPKldpqELAQRILEETKSHLLAVER-LQRSGGPagpdredsvvAPSSTTVFR 2087
Cdd:PHA03377 589 DMAPPSTGPRQQAKCKDGPPASGPHEKQPP----SSAPRDMAPSVVRMFLRERlLEQSTGP----------KPKSFWEMR 654
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2088 AS-ETSAFSKPILSHQRSQLSPLTVKPQPPARSSSLPKVSS--PATSEVSGKDGLSPPG--SSHPSPGRDTPVSPAD--- 2159
Cdd:PHA03377 655 AGrDGSGIQQEPSSRRQPATQSTPPRPSWLPSVFVLPSVDAgrAQPSEESHLSSMSPTQpiSHEEQPRYEDPDDPLDlsl 734
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2160 -PPLFRLKYPSSPYSAHisKSPrntsPACSAPSPalsyssaGSARSSPADAPDEKVQavhslkmlwqsTPQPPRGPRKTC 2238
Cdd:PHA03377 735 hPDQAPPPSHQAPYSGH--EEP----QAQQAPYP-------GYWEPRPPQAPYLGYQ-----------EPQAQGVQVSSY 790
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2239 RGAPGTLTSK------RDVLSLLNLSPRHGKEEGGADrlelkelsvQRHDEVPPK-VPTNGHWCTDTATLTTAggRSTTA 2311
Cdd:PHA03377 791 PGYAGPWGLRaqhpryRHSWAYWSQYPGHGHPQGPWA---------PRPPHLPPQwDGSAGHGQDQVSQFPHL--QSETG 859
|
....
gi 568935438 2312 APRP 2315
Cdd:PHA03377 860 PPRL 863
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
685-794 |
1.71e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 48.24 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 685 VYMALGKYTMAFKCYQEQLELGRKlkepslEAQVYGNMGITKMNMNVMEDAIGYfeQQLAMLQQlsgnesvlDRGRAYGN 764
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIAL--EKALKLDP--------NNAEALLN 64
|
90 100 110
....*....|....*....|....*....|
gi 568935438 765 LGDCYEALGDYEEAIKYYEQYLSVAQSLNR 794
Cdd:COG3063 65 LAELLLELGDYDEALAYLERALELDPSALR 94
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
961-1030 |
1.80e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 47.77 E-value: 1.80e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568935438 961 SYSSLGRTHHALQNYSQAVMYLQEGLRLAEQL--GRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFE 1030
Cdd:pfam13424 5 ALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAE 76
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
519-552 |
1.99e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 46.38 E-value: 1.99e-06
10 20 30
....*....|....*....|....*....|....
gi 568935438 519 CHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDK 552
Cdd:pfam13176 2 LLNLGRIYRKLGDYDEAISLYEQALALAKDPYDR 35
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
274-348 |
2.60e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 47.00 E-value: 2.60e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 274 EEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELM--EKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAED 348
Cdd:pfam13424 1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLgpDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
1913-2235 |
2.81e-06 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 53.00 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1913 PQRATLPRRQTSPqARRGASKEEEEyegfsIISMEPLATYQGEGKTRFSPDPKQPCVKAPGGVRLSVSSKGSVSTPN--S 1990
Cdd:pfam05109 449 PSSTHVPTNLTAP-ASTGPTVSTAD-----VTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNatS 522
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1991 PVKMTLIPSPNSPFQKVGKLA--SSDTGESDQSSTETDS-TVKSQEESTPKLDPQELAQRILEETKShllAVERLQRSGG 2067
Cdd:pfam05109 523 PTPAVTTPTPNATSPTLGKTSptSAVTTPTPNATSPTPAvTTPTPNATIPTLGKTSPTSAVTTPTPN---ATSPTVGETS 599
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2068 PAGPDREDSVVAPSSTTVFRA---SETSAFSKPILSHQRSQLSPLTVKPqpparsSSLPKVSSPATSEVSGKDGLSPPGS 2144
Cdd:pfam05109 600 PQANTTNHTLGGTSSTPVVTSppkNATSAVTTGQHNITSSSTSSMSLRP------SSISETLSPSTSDNSTSHMPLLTSA 673
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2145 SHPSPGRDTPVSPAdpplfrlkypsSPYSAHISKSprntSPacsAPSPALSYSSAGSARSSPADAPDEkVQAVHSLKMLW 2224
Cdd:pfam05109 674 HPTGGENITQVTPA-----------STSTHHVSTS----SP---APRPGTTSQASGPGNSSTSTKPGE-VNVTKGTPPKN 734
|
330
....*....|.
gi 568935438 2225 QSTPQPPRGPR 2235
Cdd:pfam05109 735 ATSPQAPSGQK 745
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
841-876 |
2.83e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 45.61 E-value: 2.83e-06
10 20 30
....*....|....*....|....*....|....*.
gi 568935438 841 AYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRA 876
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDRE 36
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
520-588 |
2.84e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 47.00 E-value: 2.84e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568935438 520 HNLGYAHYCLGNYQEAVKYYEQDLALAKDLH--DKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQS 588
Cdd:pfam13424 7 NNLAAVLRRLGRYDEALELLEKALEIARRLLgpDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| FxSxx_TPR |
NF040586 |
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
844-1080 |
2.93e-06 |
|
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids.
Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 52.61 E-value: 2.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 844 ELGSLHSQLGNYEQAiscleRQLNIA--RDMKDRALESD-------AACGLGGVYQQMGEYDTALQYHQLDLQIAEET-- 912
Cdd:NF040586 439 HLANALRSLGRYEEA-----RELDEDtlERQRRVLGLGEdhphtlmTAGGLGADLRALGRFREALELDEETLERHRRVfg 513
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 913 -DNPTCQgRAYGNLGLTYESLGTFERAVVYQEQHLsiaAQMNDLVAKT-----VSYSSLGRTHHALQNYSQAVMYLQEGL 986
Cdd:NF040586 514 eDHPRTL-RAANNLAVSLRLLGDYREALELDREVL---RRRRRVLGPDhprtlLSANNLARDLRELGRYAEALDLLEEAL 589
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 987 RLAEQLGRREDEA---KIRHGLGLSLWASGNLEEAqHQLyrASALFEtiRHEAQLSTDYKLSLfdLQTSSYQALQRVlvs 1063
Cdd:NF040586 590 ERYREVLGGPDHPdtlRAAKSLAVALRRAGRLEEA-LEL--AEDTYE--RYRRRFGPDHPDTL--AAALSLANDLRA--- 659
|
250
....*....|....*..
gi 568935438 1064 LGHHDEALAVAERGRTR 1080
Cdd:NF040586 660 LGDADEARELAREVLDR 676
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
303-466 |
3.46e-06 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 49.19 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 303 LELAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTH 382
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 383 LCIAQElsdyaaQGRAYGNMGNAYNALGMYDQAVKYHRQELQISmevndrASQASTHGNLAVAYQALGAHDRALQHYQNH 462
Cdd:COG5010 81 LQLDPN------NPELYYNLALLYSRSGDKDEAKEYYEKALALS------PDNPNAYSNLAALLLSLGQDDEAKAALQRA 148
|
....
gi 568935438 463 LNIA 466
Cdd:COG5010 149 LGTS 152
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1915-2250 |
3.49e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.87 E-value: 3.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1915 RATLPRRQTSPQARRGASKEEEEYEGFSII---SMEPLATYQGEGKTRFSPDPKQPCVKAPGGvrlSVSSKGSVSTPNSP 1991
Cdd:PHA03307 50 LAAVTVVAGAAACDRFEPPTGPPPGPGTEApanESRSTPTWSLSTLAPASPAREGSPTPPGPS---SPDPPPPTPPPASP 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1992 VkmtliPSPNSPFQKVGKLASSDTGESDQSSTETDStVKSQEESTPKLDPQ-ELAQRILEET--------KSHLLAVERL 2062
Cdd:PHA03307 127 P-----PSPAPDLSEMLRPVGSPGPPPAASPPAAGA-SPAAVASDAASSRQaALPLSSPEETarapssppAEPPPSTPPA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2063 QRSGGPAGPDREDSVVAPSST------TVFRASETSAFSKPILShQRSQLSPLTVKPQPPARSSSLPKVS-SPATSEVSG 2135
Cdd:PHA03307 201 AASPRPPRRSSPISASASSPApapgrsAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTRIwEASGWNGPS 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2136 KDGLSPPGSSHPSPGRDTPVS------PADPPLFRLKYPSSPYSAHISKSPR--NTSPACSAPSPALSYSSAGSARSSPA 2207
Cdd:PHA03307 280 SRPGPASSSSSPRERSPSPSPsspgsgPAPSSPRASSSSSSSRESSSSSTSSssESSRGAAVSPGPSPSRSPSPSRPPPP 359
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 568935438 2208 DAPDEKVQAVHSLKMLWQSTPQPPRGPRKTCRGAPGTLTSKRD 2250
Cdd:PHA03307 360 ADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
488-589 |
3.70e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 47.47 E-value: 3.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 488 SRGEYVQAAPYYEQYLRLAPDLQDmegegkVCHNLGYAHYCLGNYQEAVKYyeqDLALAKDLHDklsqAKAYCNLGLAFK 567
Cdd:COG3063 4 KLGDLEEAEEYYEKALELDPDNAD------ALNNLGLLLLEQGRYDEAIAL---EKALKLDPNN----AEALLNLAELLL 70
|
90 100
....*....|....*....|..
gi 568935438 568 ALLNFAKAEECQKYLLSLAQSL 589
Cdd:COG3063 71 ELGDYDEALAYLERALELDPSA 92
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
365-471 |
3.85e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 47.09 E-value: 3.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 365 IHQMKGDYDTALKLHKthlciaQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRqelqiSMEVNdrASQASTHGNLAV 444
Cdd:COG3063 1 LYLKLGDLEEAEEYYE------KALELDPDNADALNNLGLLLLEQGRYDEAIALEK-----ALKLD--PNNAEALLNLAE 67
|
90 100
....*....|....*....|....*..
gi 568935438 445 AYQALGAHDRALQHYQNHLNIARELRD 471
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSALR 94
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
761-793 |
3.91e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 45.22 E-value: 3.91e-06
10 20 30
....*....|....*....|....*....|...
gi 568935438 761 AYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLN 793
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPY 33
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
245-349 |
4.12e-06 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 47.09 E-value: 4.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 245 VYIAMGDFENAVQCHEQHLRIAKDlgskreEARAYSNLGSAYHYRRNFDKAMSYhncvlELAQELmeKPIEMRAYAGLGH 324
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIAL-----EKALKL--DPNNAEALLNLAE 67
|
90 100
....*....|....*....|....*
gi 568935438 325 AARCMQDLERAKQYHEQQLGIAEDL 349
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSA 92
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
193-348 |
5.53e-06 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 48.26 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 193 EAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSkddlSEARELgnMGAVYIAMGDFENAVQCHEQHLRIAKDlgsk 272
Cdd:COG4783 1 AACAEALYALAQALLLAGDYDEAEALLEKALELDPDN----PEAFAL--LGEILLQLGDLDEAIVLLHEALELDPD---- 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 273 reEARAYSNLGSAYHYRRNFDKAMSYhncvleLAQELMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAED 348
Cdd:COG4783 71 --EPEARLNLGLALLKAGDYDEALAL------LEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPD 138
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
760-791 |
5.64e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 44.72 E-value: 5.64e-06
10 20 30
....*....|....*....|....*....|..
gi 568935438 760 RAYGNLGDCYEALGDYEEAIKYYEQYLSVAQS 791
Cdd:pfam00515 2 KALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
316-388 |
6.93e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 45.84 E-value: 6.93e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 316 MRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDL--KDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQE 388
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
848-1072 |
7.00e-06 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 49.53 E-value: 7.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 848 LHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETD--NPTcQGRAYGNL 925
Cdd:COG4785 1 LYALALALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDRAlaLPD-LAQLYYER 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 926 GLTYESLGTFERAVvyqeQHLSIAAQMNDLVAKTvsYSSLGRTHHALQNYSQAVMYLQEGLRLaeqlgrREDEAKIRHGL 1005
Cdd:COG4785 80 GVAYDSLGDYDLAI----ADFDQALELDPDLAEA--YNNRGLAYLLLGDYDAALEDFDRALEL------DPDYAYAYLNR 147
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 1006 GLSLWASGNLEEAQHQLYRASALFET------IRHEAQLSTDYKLSLFDLQtssyQALQRVLVSLGHHDEALA 1072
Cdd:COG4785 148 GIALYYLGRYELAIADLEKALELDPNdperalWLYLAERKLDPEKALALLL----EDWATAYLLQGDTEEARE 216
|
|
| TPR_8 |
pfam13181 |
Tetratricopeptide repeat; |
760-791 |
8.66e-06 |
|
Tetratricopeptide repeat;
Pssm-ID: 404131 [Multi-domain] Cd Length: 33 Bit Score: 44.31 E-value: 8.66e-06
10 20 30
....*....|....*....|....*....|..
gi 568935438 760 RAYGNLGDCYEALGDYEEAIKYYEQYLSVAQS 791
Cdd:pfam13181 2 EAYYNLGLIYLKLGDYEEAKEYYEKALELDPD 33
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
10-264 |
9.63e-06 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 49.73 E-value: 9.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 10 AYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQLQKMKLDKSPfvVVSVVGQELL 89
Cdd:COG2956 44 AHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLEKLLELDPDDAE--ALRLLAEIYE 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 90 TAGHHGASVVVLEAALKIGTCSLKLRgsvfSALSSAHWSLGNTEKSTGYMQQDLDVAKTLGdqtgecRAHGNLGSAFFSK 169
Cdd:COG2956 122 QEGDWEKAIEVLERLLKLGPENAHAY----CELAELYLEQGDYDEAIEALEKALKLDPDCA------RALLLLAELYLEQ 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 170 GNYREALTnhrhqlVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARelgnmgaVYIAM 249
Cdd:COG2956 192 GDYEEAIA------ALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLALAD-------LLERK 258
|
250
....*....|....*
gi 568935438 250 GDFENAVQCHEQHLR 264
Cdd:COG2956 259 EGLEAALALLERQLR 273
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
837-939 |
1.01e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 49.14 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 837 NKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMkdraleSDAACGLGGVYQQMGEYDTALQyhqlDLQIAEETDnPT 916
Cdd:COG4785 71 DLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL------AEAYNNRGLAYLLLGDYDAALE----DFDRALELD-PD 139
|
90 100
....*....|....*....|...
gi 568935438 917 cQGRAYGNLGLTYESLGTFERAV 939
Cdd:COG4785 140 -YAYAYLNRGIALYYLGRYELAI 161
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
920-991 |
1.09e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 45.46 E-value: 1.09e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 920 RAYGNLGLTYESLGTFERAVVYQEQHLSIAAQ--MNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQ 991
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRllGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
832-949 |
1.38e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 47.26 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 832 LGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEe 911
Cdd:COG5010 47 RDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPN------NPELYYNLALLYSRSGDKDEAKEYYEKALALSP- 119
|
90 100 110
....*....|....*....|....*....|....*...
gi 568935438 912 tDNPtcqgRAYGNLGLTYESLGTFERAVVYQEQHLSIA 949
Cdd:COG5010 120 -DNP----NAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
817-949 |
1.42e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 46.54 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 817 QALVCFEKRLVvahelgEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYD 896
Cdd:COG4235 1 EAIARLRQALA------ANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPD------NADALLDLAEALLAAGDTE 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568935438 897 TALQYhqLDLQIAEETDNPtcqgRAYGNLGLTYESLGTFERAVVYQEQHLSIA 949
Cdd:COG4235 69 EAEEL--LERALALDPDNP----EALYLLGLAAFQQGDYAEAIAAWQKLLALL 115
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
156-228 |
1.67e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 45.07 E-value: 1.67e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 156 CRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKL--KDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQ 228
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
733-842 |
1.71e-05 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 46.14 E-value: 1.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 733 EDAIGYFEQqlaMLQQLSGNESvldRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDqakAYRGLGNGHRAT 812
Cdd:COG1729 10 DEAIAAFKA---FLKRYPNSPL---APDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKAPD---ALLKLGLSYLEL 80
|
90 100 110
....*....|....*....|....*....|
gi 568935438 813 GSLQQALVCFEKrLVVAHELGEASNKAQAY 842
Cdd:COG1729 81 GDYDKARATLEE-LIKKYPDSEAAKEARAR 109
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
333-565 |
1.74e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 48.37 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 333 ERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKThlciAQELSDYAaqgRAYGNMGNAYNALGMY 412
Cdd:COG4785 17 AAASKAAILLAALLFAAVLALAIALADLALALAAAALAAAALAAERIDR----ALALPDLA---QLYYERGVAYDSLGDY 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 413 DQAVKYHRQELQIsmevndRASQASTHGNLAVAYQALGAHDRALQHYqnhlNIARELRDiqSEARALSNLGNFHCSRGEY 492
Cdd:COG4785 90 DLAIADFDQALEL------DPDLAEAYNNRGLAYLLLGDYDAALEDF----DRALELDP--DYAYAYLNRGIALYYLGRY 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 493 VQAAPYYEQYLRLAPDLQDMegegkvcHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLA 565
Cdd:COG4785 158 ELAIADLEKALELDPNDPER-------ALWLYLAERKLDPEKALALLLEDWATAYLLQGDTEEARELFKLALA 223
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
760-784 |
1.87e-05 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 43.20 E-value: 1.87e-05
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
543-705 |
1.87e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 46.88 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 543 LALAKDLHDKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFICKKDINGAIKFYEQQ 622
Cdd:COG5010 1 ARALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 623 LGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGYhtqeLEVYQELSdlPGECRAHGHLAAVYMALGKYTMAFKCYQEQ 702
Cdd:COG5010 81 LQLDPN------NPELYYNLALLYSRSGDKDEAKEY----YEKALALS--PDNPNAYSNLAALLLSLGQDDEAKAALQRA 148
|
...
gi 568935438 703 LEL 705
Cdd:COG5010 149 LGT 151
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
241-354 |
1.89e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 46.15 E-value: 1.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 241 NMGAVYIAMGDFENAVQCHEQHLRIAKDlgskreEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAqelmekPIEMRAYA 320
Cdd:COG4235 22 LLGRAYLRLGRYDEALAAYEKALRLDPD------NADALLDLAEALLAAGDTEEAEELLERALALD------PDNPEALY 89
|
90 100 110
....*....|....*....|....*....|....
gi 568935438 321 GLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAA 354
Cdd:COG4235 90 LLGLAAFQQGDYAEAIAAWQKLLALLPADAPARL 123
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
636-708 |
2.06e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 44.69 E-value: 2.06e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 636 ASAYAALGTAYRMVQKYDKALGYHTQELEVYQEL--SDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRK 708
Cdd:pfam13424 3 ATALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
494-623 |
2.65e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 45.77 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 494 QAAPYYEQYLRLAPDlqdmEGEGKVchNLGYAHYCLGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLGLAFKALLNFA 573
Cdd:COG4235 1 EAIARLRQALAANPN----DAEGWL--LLGRAYLRLGRYDEALAAYEKALRLDPD------NADALLDLAEALLAAGDTE 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 568935438 574 KAEEcqkyLLSLAQSLDNSQAkfRALGNLGDIFICKKDINGAIKFYEQQL 623
Cdd:COG4235 69 EAEE----LLERALALDPDNP--EALYLLGLAAFQQGDYAEAIAAWQKLL 112
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1948-2247 |
2.69e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.94 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1948 PLATYQGEGKTRFSPDPKQPCVKA----PGGVRLSVSSKGSVSTPNSPvKMTLIPSPNSPfqkvgKLASSDTGESDQSST 2023
Cdd:PHA03247 2561 PAAPDRSVPPPRPAPRPSEPAVTSrarrPDAPPQSARPRAPVDDRGDP-RGPAPPSPLPP-----DTHAPDPPPPSPSPA 2634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2024 ETDSTVKSQEESTPKLDPQELAqrileetkshllAVERLQRSGGPAGPDREDSVVAPSSTTVFRASETSAfsKPILSHQR 2103
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDP------------APGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTV--GSLTSLAD 2700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2104 SQLSPLTVKPQPPARSSSLPKVSSPATSEVSGKDGLSPPGSSHPSPGRDTPVSPADPPlfRLKYPSSPYSAHISKSPRNT 2183
Cdd:PHA03247 2701 PPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPA--RPPTTAGPPAPAPPAAPAAG 2778
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 2184 SPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSLKML-WQSTPQPPRGPRKTCRGAPGTLTS 2247
Cdd:PHA03247 2779 PPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALpPAASPAGPLPPPTSAQPTAPPPPP 2843
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
529-626 |
2.74e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.78 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 529 LGNYQEAVKYYEQDLALAKDlhdklsQAKAYCNLGLAFKALLNFAKAEECQKyllslAQSLDNSQAkfRALGNLGDIFIC 608
Cdd:COG3063 5 LGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALEK-----ALKLDPNNA--EALLNLAELLLE 71
|
90
....*....|....*...
gi 568935438 609 KKDINGAIKFYEQQLGLS 626
Cdd:COG3063 72 LGDYDEALAYLERALELD 89
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
888-992 |
2.74e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.78 E-value: 2.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 888 VYQQMGEYDTALQYHQLDLQIAEEtdnptcQGRAYGNLGLTYESLGTFERAVVYQEqhlSIAAQMNDLVAktvsYSSLGR 967
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALEK---ALKLDPNNAEA----LLNLAE 67
|
90 100
....*....|....*....|....*
gi 568935438 968 THHALQNYSQAVMYLQEGLRLAEQL 992
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSA 92
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
755-909 |
3.10e-05 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 46.49 E-value: 3.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 755 VLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHELge 834
Cdd:COG5010 10 LPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQ----ALQL-- 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568935438 835 ASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDmkdralESDAACGLGGVYQQMGEYDTALQYHQLDLQIA 909
Cdd:COG5010 84 DPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPD------NPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
478-513 |
3.39e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 42.53 E-value: 3.39e-05
10 20 30
....*....|....*....|....*....|....*.
gi 568935438 478 ALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDME 513
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDRE 36
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1913-2318 |
3.79e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1913 PQRATLPRRQTSPQARRGASKEEEEYEGFSI-ISMEPLATYQGEGKTRFSPDPKqPCVKAPGGVRLSVSSKGSVSTPNSP 1991
Cdd:PHA03247 2658 PGRVSRPRRARRLGRAAQASSPPQRPRRRAArPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGPAAARQASPALP 2736
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1992 VKMTLIPSPNSPfqkvgklaSSDTGESDQSSTETDSTVKSqeeSTPKLDPQELAQRILEETKSHLLAVerlQRSGGPAGP 2071
Cdd:PHA03247 2737 AAPAPPAVPAGP--------ATPGGPARPARPPTTAGPPA---PAPPAAPAAGPPRRLTRPAVASLSE---SRESLPSPW 2802
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2072 DRED--SVVAPSSTTVFRASETSAFSKPilshqrsqlsPLTVKPQPPARSSSLPKVSSPATSEVSgkDGLSPPGSSHPSP 2149
Cdd:PHA03247 2803 DPADppAAVLAPAAALPPAASPAGPLPP----------PTSAQPTAPPPPPGPPPPSLPLGGSVA--PGGDVRRRPPSRS 2870
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2150 GRDTPVSPADPPLFRLKYPSSPYSAHISKSPRNTSPACSAPSPAlsyssagsarSSPADAPDEKVQAvhslkmlwQSTPQ 2229
Cdd:PHA03247 2871 PAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAP----------PPPQPQPQPPPPP--------QPQPP 2932
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2230 PPRGPRKTCRGAPGTLTSKRDVLSLLNLSPRHGKEEGG---ADRLELKELSVQRHDEVPPKVPTNGHWCTDTATLTTAGG 2306
Cdd:PHA03247 2933 PPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGrvaVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLA 3012
|
410
....*....|..
gi 568935438 2307 RSTTAAPRPLRL 2318
Cdd:PHA03247 3013 LHEETDPPPVSL 3024
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
609-709 |
4.55e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 44.39 E-value: 4.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 609 KKDINGAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGYHtqelevyQELSDLPGECRAHGHLAAVYMA 688
Cdd:COG3063 5 LGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALE-------KALKLDPNNAEALLNLAELLLE 71
|
90 100
....*....|....*....|.
gi 568935438 689 LGKYTMAFKCYQEQLELGRKL 709
Cdd:COG3063 72 LGDYDEALAYLERALELDPSA 92
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
597-668 |
4.55e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 43.53 E-value: 4.55e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 597 RALGNLGDIFICKKDINGAIKFYEQQLGLSHHV--KDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQE 668
Cdd:pfam13424 4 TALNNLAAVLRRLGRYDEALELLEKALEIARRLlgPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
757-927 |
4.61e-05 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 47.22 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 757 DRGRAYGNLGDCYEALGDYEEAIKYYEQylsvAQSLNrmQDQAKAYRGLGNGHRATGSLQQALVCFEKrlvvAHELgeAS 836
Cdd:COG4785 71 DLAQLYYERGVAYDSLGDYDLAIADFDQ----ALELD--PDLAEAYNNRGLAYLLLGDYDAALEDFDR----ALEL--DP 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 837 NKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALesdaacgLGGVYQQMGEYDTALQYHQLDLQIAEETDNPT 916
Cdd:COG4785 139 DYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERAL-------WLYLAERKLDPEKALALLLEDWATAYLLQGDT 211
|
170
....*....|.
gi 568935438 917 CQGRAYGNLGL 927
Cdd:COG4785 212 EEARELFKLAL 222
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
239-272 |
5.81e-05 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 42.14 E-value: 5.81e-05
10 20 30
....*....|....*....|....*....|....
gi 568935438 239 LGNMGAVYIAMGDFENAVQCHEQHLRIAKDLGSK 272
Cdd:pfam13176 2 LLNLGRIYRKLGDYDEAISLYEQALALAKDPYDR 35
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
827-1214 |
6.80e-05 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 48.32 E-value: 6.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 827 VVAHELGEASNKAQAYGEL---GSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYhq 903
Cdd:COG3899 690 ELAHHLNRAGERDRAARLLlraARRALARGAYAEALRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEAL-- 767
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 904 ldlqiaeetdnptcqgraygnlgltyeslgtFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHhaLQNYSQAVMYLQ 983
Cdd:COG3899 768 -------------------------------LERALAARALAALAALRHGNPPASARAYANLGLLL--LGDYEEAYEFGE 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 984 EGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVS 1063
Cdd:COG3899 815 LALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAALAAAAAAAA 894
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1064 LGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFH 1143
Cdd:COG3899 895 RLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAA 974
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568935438 1144 EHYLGDNSVESSSDFQAGSSAALPVATNSTLEQHIASVREALGVESYYSRACASSETESEAGDIMEQQLEE 1214
Cdd:COG3899 975 AAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALAL 1045
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
1992-2315 |
6.86e-05 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 48.52 E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1992 VKMTLIP-SPNSPfqKVGKLASSD-TGESDQSSTETDST--VKSQEESTPKLDPQELaQRILEETKSHLlaverlqRSGG 2067
Cdd:PHA03378 520 VMATLLPpSPPQP--RAGRRAPCVyTEDLDIESDEPASTepVHDQLLPAPGLGPLQI-QPLTSPTTSQL-------ASSA 589
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2068 PAGPDREDSVVAPSS-----TTVFRASETSA----------------------FSKPILS--HQRSQLSPLTVK------ 2112
Cdd:PHA03378 590 PSYAQTPWPVPHPSQtpeppTTQSHIPETSAprqwpmplrpipmrplrmqpitFNVLVFPtpHQPPQVEITPYKptwtqi 669
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2113 ------PQPPARSSSLPKVSSPATSEVSGKdglsppgsshpspgRDTPVSPADPPLFRLKYPSSPYSAH--ISKSPRNTS 2184
Cdd:PHA03378 670 ghipyqPSPTGANTMLPIQWAPGTMQPPPR--------------APTPMRPPAAPPGRAQRPAAATGRArpPAAAPGRAR 735
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2185 PACSAPSPALSYSSAGSARSSPADAPDE-KVQAVHSLKMLWQSTPQPPRGPRKTCRGAPGTLTSKRDVLSLLNLSPRHGK 2263
Cdd:PHA03378 736 PPAAAPGRARPPAAAPGRARPPAAAPGRaRPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAP 815
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 568935438 2264 EEGGADRLELKELSVQRHDEVPPkvptnghwctdTATLTTAGGRSTTAAPRP 2315
Cdd:PHA03378 816 GQQGPTKQILRQLLTGGVKRGRP-----------SLKKPAALERQAAAGPTP 856
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
733-819 |
1.38e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 44.57 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 733 EDAIGYFEQQLAMLQqlsgnesvlDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVA-QSLNRMQDQAKAYRGLGNGHRA 811
Cdd:COG5010 71 EESLALLEQALQLDP---------NNPELYYNLALLYSRSGDKDEAKEYYEKALALSpDNPNAYSNLAALLLSLGQDDEA 141
|
....*...
gi 568935438 812 TGSLQQAL 819
Cdd:COG5010 142 KAALQRAL 149
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
329-426 |
1.62e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.46 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 329 MQDLERAKQYHEQQLGIAEDlkdraaEGRASSNLGIIHQMKGDYDTALKLHKthlciAQELSDYAAQgrAYGNMGNAYNA 408
Cdd:COG3063 5 LGDLEEAEEYYEKALELDPD------NADALNNLGLLLLEQGRYDEAIALEK-----ALKLDPNNAE--ALLNLAELLLE 71
|
90
....*....|....*...
gi 568935438 409 LGMYDQAVKYHRQELQIS 426
Cdd:COG3063 72 LGDYDEALAYLERALELD 89
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
757-826 |
1.73e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.46 E-value: 1.73e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 757 DRGRAYGNLGDCYEALGDYEEAIKYyeqylsvAQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRL 826
Cdd:COG3063 24 DNADALNNLGLLLLEQGRYDEAIAL-------EKALKLDPNNAEALLNLAELLLELGDYDEALAYLERAL 86
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
1945-2321 |
1.75e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1945 SMEPLATyqGEGKTRFSPD----PKQPCVKAPGGVRLSVSSKGSVSTPNSPVKMTL------IPSPNSPFQKVGKLASSD 2014
Cdd:pfam03154 13 SMSTLRS--GRKKQTASPDgrasPTNEDLRSSGRNSPSAASTSSNDSKAESMKKSSkkikeeAPSPLKSAKRQREKGASD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2015 TGESDQSSTETDstvKSQEESTPKlDPQE------LAQRILEETKSHLLAVERLQRSGGPAGPDREDSVVAPSSTTVFRA 2088
Cdd:pfam03154 91 TEEPERATAKKS---KTQEISRPN-SPSEgegessDGRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2089 SETSafsKPILSHQrsqlSPLTVKPQPPARSSSLPKVSSPATSEVSgkdglsppgsshpspGRDTPVSPADPPLFRLKYP 2168
Cdd:pfam03154 167 LQTQ---PPVLQAQ----SGAASPPSPPPPGTTQAATAGPTPSAPS---------------VPPQGSPATSQPPNQTQST 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2169 SSPYSAhISKSPRNTSPACSAPSPALsyssagsaRSSPADAPDEKVQAvhslkmlwQSTPQPP-RGPrktcrGAPGTLTs 2247
Cdd:pfam03154 225 AAPHTL-IQQTPTLHPQRLPSPHPPL--------QPMTQPPPPSQVSP--------QPLPQPSlHGQ-----MPPMPHS- 281
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 2248 krdvlslLNLSPRHGKEEGGADRLELKELSVQRHDEVPPKVPTNGHwctDTATLTTAGGRSTTAAPRPLR---LPLA 2321
Cdd:pfam03154 282 -------LQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQ---SQQRIHTPPSQSQLQSQQPPReqpLPPA 348
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
898-1077 |
1.75e-04 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 46.91 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 898 ALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAktvsYSSLGRTHHALQNYSQ 977
Cdd:COG3914 21 AAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALLLLAAL----LELAALLLQALGRYEE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 978 AVMYLQEGLRLAEqlgrreDEAKIRHGLGLSLWASGNLEEAQHQLYRAsalfetirheAQLSTDYklslfdlqTSSYQAL 1057
Cdd:COG3914 97 ALALYRRALALNP------DNAEALFNLGNLLLALGRLEEALAALRRA----------LALNPDF--------AEAYLNL 152
|
170 180
....*....|....*....|
gi 568935438 1058 QRVLVSLGHHDEALAVAERG 1077
Cdd:COG3914 153 GEALRRLGRLEEAIAALRRA 172
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
198-298 |
1.89e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 43.46 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 198 ALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSearelgNMGAVYIAMGDFENAVQCHEQHLRIAKDlgskreEAR 277
Cdd:COG4235 19 GWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALL------DLAEALLAAGDTEEAEELLERALALDPD------NPE 86
|
90 100
....*....|....*....|.
gi 568935438 278 AYSNLGSAYHYRRNFDKAMSY 298
Cdd:COG4235 87 ALYLLGLAAFQQGDYAEAIAA 107
|
|
| TPR_2 |
pfam07719 |
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats ... |
517-548 |
2.00e-04 |
|
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by pfam00515.
Pssm-ID: 429619 [Multi-domain] Cd Length: 33 Bit Score: 40.58 E-value: 2.00e-04
10 20 30
....*....|....*....|....*....|..
gi 568935438 517 KVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD 548
Cdd:pfam07719 2 EALYNLGLAYYKLGDYEEALEAYEKALELDPN 33
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
773-864 |
2.51e-04 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 42.67 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 773 GDYEEAIKYYEQYLSVAQSLNRmqdQAKAYRGLGNGHRATGSLQQALVCFEKrlvVAHELGEASNKAQAYGELGSLHSQL 852
Cdd:COG1729 7 GDYDEAIAAFKAFLKRYPNSPL---APDALYWLGEAYYALGDYDEAAEAFEK---LLKRYPDSPKAPDALLKLGLSYLEL 80
|
90
....*....|..
gi 568935438 853 GNYEQAISCLER 864
Cdd:COG1729 81 GDYDKARATLEE 92
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
205-311 |
2.87e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.08 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 205 VYTAIGDYPNALASHKQCVLLAKqskdDLSEAreLGNMGAVYIAMGDFENAVQChEQHLRIAKDlgskreEARAYSNLGS 284
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDP----DNADA--LNNLGLLLLEQGRYDEAIAL-EKALKLDPN------NAEALLNLAE 67
|
90 100
....*....|....*....|....*..
gi 568935438 285 AYHYRRNFDKAMSYHNCVLELAQELME 311
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDPSALR 94
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
274-378 |
3.08e-04 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 42.69 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 274 EEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEkpiemrAYAGLGHAARCMQDLERAKQYHEQQLGIAEDlkdra 353
Cdd:COG4235 15 NDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNAD------ALLDLAEALLAAGDTEEAEELLERALALDPD----- 83
|
90 100
....*....|....*....|....*
gi 568935438 354 aEGRASSNLGIIHQMKGDYDTALKL 378
Cdd:COG4235 84 -NPEALYLLGLAAFQQGDYAEAIAA 107
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
398-433 |
3.47e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 39.83 E-value: 3.47e-04
10 20 30
....*....|....*....|....*....|....*.
gi 568935438 398 AYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRA 433
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYDRE 36
|
|
| TPR_8 |
pfam13181 |
Tetratricopeptide repeat; |
839-871 |
4.14e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 404131 [Multi-domain] Cd Length: 33 Bit Score: 39.69 E-value: 4.14e-04
10 20 30
....*....|....*....|....*....|...
gi 568935438 839 AQAYGELGSLHSQLGNYEQAISCLERQLNIARD 871
Cdd:pfam13181 1 AEAYYNLGLIYLKLGDYEEAKEYYEKALELDPD 33
|
|
| TPR_2 |
pfam07719 |
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats ... |
760-787 |
4.19e-04 |
|
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by pfam00515.
Pssm-ID: 429619 [Multi-domain] Cd Length: 33 Bit Score: 39.43 E-value: 4.19e-04
10 20
....*....|....*....|....*...
gi 568935438 760 RAYGNLGDCYEALGDYEEAIKYYEQYLS 787
Cdd:pfam07719 2 EALYNLGLAYYKLGDYEEALEAYEKALE 29
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
517-548 |
4.82e-04 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 39.35 E-value: 4.82e-04
10 20 30
....*....|....*....|....*....|..
gi 568935438 517 KVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD 548
Cdd:smart00028 2 EALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
276-308 |
5.02e-04 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 39.35 E-value: 5.02e-04
10 20 30
....*....|....*....|....*....|...
gi 568935438 276 ARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE 308
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| FxSxx_TPR |
NF040586 |
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
357-565 |
6.82e-04 |
|
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids.
Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 44.91 E-value: 6.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 357 RASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL--SDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEV---ND 431
Cdd:NF040586 521 RAANNLAVSLRLLGDYREALELDREVLRRRRRVlgPDHPRTLLSANNLARDLRELGRYAEALDLLEEALERYREVlggPD 600
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 432 RASQASTHGNLAVAYQALGAHDRALQHyqnHLNIARELRDIQSEA-----RALSNLGNFHCSRGEYVQAapyyeqyLRLA 506
Cdd:NF040586 601 HPDTLRAAKSLAVALRRAGRLEEALEL---AEDTYERYRRRFGPDhpdtlAAALSLANDLRALGDADEA-------RELA 670
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 507 PD----LQDMEGEGkvcH--------NLGYAHYCLGNYQEAVKYYEQDLALakdLHDKLSQAKAY---CNLGLA 565
Cdd:NF040586 671 REvldrYRRVLGED---HpftlacrnNLAVLLRALGDPEEARELAEAALEG---LRERLGPDHPYtlaAAVNLA 738
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
243-380 |
7.10e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 43.37 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 243 GAVYIAMGDFENAVQCHEQHLRIAKDLgskreeARAYSNLGSAYHYRRNFDKAMSYHNCVLELaqelmeKPIEMRAYAGL 322
Cdd:COG4785 80 GVAYDSLGDYDLAIADFDQALELDPDL------AEAYNNRGLAYLLLGDYDAALEDFDRALEL------DPDYAYAYLNR 147
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568935438 323 GHA-------ARCMQDLERAKQYHEQQ------LGIAE-DLKDRAAEGRASSNLGIIHQMKGDYDTALKLHK 380
Cdd:COG4785 148 GIAlyylgryELAIADLEKALELDPNDperalwLYLAErKLDPEKALALLLEDWATAYLLQGDTEEARELFK 219
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
733-869 |
7.60e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 42.25 E-value: 7.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 733 EDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEqylsvaqslnrmqDQAKAYRGLGNGHRAT 812
Cdd:COG5010 35 NNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDP-------------NNPELYYNLALLYSRS 101
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 568935438 813 GSLQQALVCFEKrlvvAHELgeASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIA 869
Cdd:COG5010 102 GDKDEAKEYYEK----ALAL--SPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTS 152
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
2065-2337 |
8.47e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.91 E-value: 8.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2065 SGGPAGPDREDSVVAPSST--TVFRASETSafskPILSHQRSQLSPLTVKPQP--PARSSSLPKVSSPaTSEVSgkdgLS 2140
Cdd:pfam05109 446 TGLPSSTHVPTNLTAPASTgpTVSTADVTS----PTPAGTTSGASPVTPSPSPrdNGTESKAPDMTSP-TSAVT----TP 516
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2141 PPGSSHPSPGRDTPVSPADPPLFRLKYPSS----PYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSP---ADAP--- 2210
Cdd:pfam05109 517 TPNATSPTPAVTTPTPNATSPTLGKTSPTSavttPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPtpnATSPtvg 596
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2211 DEKVQAVHSLKML--WQSTP---QPPRGPRKTCRGAPGTLTSKRDvlSLLNLSPRHGKEEGGAdrlELKELSVQRHDEVP 2285
Cdd:pfam05109 597 ETSPQANTTNHTLggTSSTPvvtSPPKNATSAVTTGQHNITSSST--SSMSLRPSSISETLSP---STSDNSTSHMPLLT 671
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 568935438 2286 PKVPTNGHWCTDTATLTTAGGRSTTA--APRPLRLPLANGykflsPGRLFPSSK 2337
Cdd:pfam05109 672 SAHPTGGENITQVTPASTSTHHVSTSspAPRPGTTSQASG-----PGNSSTSTK 720
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
839-872 |
9.69e-04 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 38.58 E-value: 9.69e-04
10 20 30
....*....|....*....|....*....|....
gi 568935438 839 AQAYGELGSLHSQLGNYEQAISCLERQLNIARDM 872
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPNN 34
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
898-1025 |
1.15e-03 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 41.87 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 898 ALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAqmNDLVAktvsYSSLGRTHHALQNYSQ 977
Cdd:COG5010 33 GANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDP--NNPEL----YYNLALLYSRSGDKDE 106
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568935438 978 AVMYLQEGLRLAEqlgrreDEAKIRHGLGLSLWASGNLEEAQHQLYRA 1025
Cdd:COG5010 107 AKEYYEKALALSP------DNPNAYSNLAALLLSLGQDDEAKAALQRA 148
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
349-482 |
1.42e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.76 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 349 LKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDyaaqgrAYGNMGNAYNALGMYDQAVKYHRQELQISme 428
Cdd:COG4235 10 LAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNAD------ALLDLAEALLAAGDTEEAEELLERALALD-- 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 568935438 429 vndrASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL 482
Cdd:COG4235 82 ----PDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASIAEA 131
|
|
| PRK02603 |
PRK02603 |
photosystem I assembly protein Ycf3; Provisional |
890-1022 |
1.58e-03 |
|
photosystem I assembly protein Ycf3; Provisional
Pssm-ID: 179448 [Multi-domain] Cd Length: 172 Bit Score: 41.58 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 890 QQMGEYDTALQYHQLDLQIAEetdNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLsiaaqmnDLVAKTVSysslgrth 969
Cdd:PRK02603 46 QADGEYAEALENYEEALKLEE---DPNDRSYILYNMGIIYASNGEHDKALEYYHQAL-------ELNPKQPS-------- 107
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 568935438 970 hALQNYsqAVMYLQEGlRLAEQLGrREDEAKIRHGLGLSLW------ASGNLEEAQHQL 1022
Cdd:PRK02603 108 -ALNNI--AVIYHKRG-EKAEEAG-DQDEAEALFDKAAEYWkqairlAPNNYIEAQNWL 161
|
|
| PRK11447 |
PRK11447 |
cellulose synthase subunit BcsC; Provisional |
387-508 |
1.64e-03 |
|
cellulose synthase subunit BcsC; Provisional
Pssm-ID: 183140 [Multi-domain] Cd Length: 1157 Bit Score: 43.92 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 387 QELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQAS----THGNLAVAY--QALGAHD--RALQH 458
Cdd:PRK11447 294 QAVRANPKDSEALGALGQAYSQQGDRARAVAQFEKALALDPHSSNRDKWESllkvNRYWLLIQQgdAALKANNlaQAERL 373
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 568935438 459 YQNhlniARELRDiqSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:PRK11447 374 YQQ----ARQVDN--TDSYAVLGLGDVAMARKDYAAAERYYQQALRMDPG 417
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
397-421 |
1.68e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.81 E-value: 1.68e-03
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
476-508 |
2.00e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 37.79 E-value: 2.00e-03
10 20 30
....*....|....*....|....*....|...
gi 568935438 476 ARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPD 508
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
839-901 |
2.08e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 39.97 E-value: 2.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 839 AQAYGELGSLHSQLGNYEQAISCLERqlnIARDMKDRALESDAACGLGGVYQQMGEYDTALQY 901
Cdd:COG1729 30 PDALYWLGEAYYALGDYDEAAEAFEK---LLKRYPDSPKAPDALLKLGLSYLELGDYDKARAT 89
|
|
| FxSxx_TPR |
NF040586 |
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
138-456 |
2.08e-03 |
|
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids.
Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 43.37 E-value: 2.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 138 YMQQDLDVAKTLGDQTGEC-------------RAHGNLGSAFFSKGNYREALTNHRHqlVLAMKLKDREAASS------A 198
Cdd:NF040586 403 YLRGDYESARDLAERALERwrerlgpddrqtlRLRFHLANALRSLGRYEEARELDED--TLERQRRVLGLGEDhphtlmT 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 199 LSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDlSEAREL---GNMGAVYIAMGDFENAVQCHEQHLRIAKDLGSKREE 275
Cdd:NF040586 481 AGGLGADLRALGRFREALELDEETLERHRRVFGE-DHPRTLraaNNLAVSLRLLGDYREALELDREVLRRRRRVLGPDHP 559
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 276 ARaysnLGSAYHYrrnfdkamsyhncvlelaqelmekpieMRAYAGLGHAARCMQDLERAKQYHEQQLGIAedlkDRAAE 355
Cdd:NF040586 560 RT----LLSANNL---------------------------ARDLRELGRYAEALDLLEEALERYREVLGGP----DHPDT 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 356 GRASSNLGIIHQMKGDYDTALKLHKthlciaqelSDYAAQGRAYG-----------NMGNAYNALGMYDQAvkyhrqeLQ 424
Cdd:NF040586 605 LRAAKSLAVALRRAGRLEEALELAE---------DTYERYRRRFGpdhpdtlaaalSLANDLRALGDADEA-------RE 668
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 568935438 425 ISMEVNDRASQA------STHG---NLAVAYQALGAHDRAL 456
Cdd:NF040586 669 LAREVLDRYRRVlgedhpFTLAcrnNLAVLLRALGDPEEAR 709
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
534-658 |
2.11e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 40.37 E-value: 2.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 534 EAVKYYEQdlALAKDLHDklsqAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQslDNSQAkfraLGNLGDIFICKKDIN 613
Cdd:COG4235 1 EAIARLRQ--ALAANPND----AEGWLLLGRAYLRLGRYDEALAAYEKALRLDP--DNADA----LLDLAEALLAAGDTE 68
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 568935438 614 GAIKFYEQQLGLSHHvkdrrlEASAYAALGTAYRMVQKYDKALGY 658
Cdd:COG4235 69 EAEELLERALALDPD------NPEALYLLGLAAFQQGDYAEAIAA 107
|
|
| ycf3 |
CHL00033 |
photosystem I assembly protein Ycf3 |
367-508 |
2.25e-03 |
|
photosystem I assembly protein Ycf3
Pssm-ID: 176974 [Multi-domain] Cd Length: 168 Bit Score: 41.15 E-value: 2.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 367 QMKGDYDTALKLHKTHLCIAQELSDyaaqgRAY--GNMGNAYNALGMYDQAVKYHRQELqismEVNDRASQASThgNLAV 444
Cdd:CHL00033 46 QSEGEYAEALQNYYEAMRLEIDPYD-----RSYilYNIGLIHTSNGEHTKALEYYFQAL----ERNPFLPQALN--NMAV 114
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568935438 445 AYQALGahDRALQhyQNHLNIARELRDiqsearalsnlgnfhcsrgeyvQAAPYYEQYLRLAPD 508
Cdd:CHL00033 115 ICHYRG--EQAIE--QGDSEIAEAWFD----------------------QAAEYWKQAIALAPG 152
|
|
| ycf3 |
CHL00033 |
photosystem I assembly protein Ycf3 |
432-546 |
2.49e-03 |
|
photosystem I assembly protein Ycf3
Pssm-ID: 176974 [Multi-domain] Cd Length: 168 Bit Score: 41.15 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 432 RASQASTHGNLAVAYQALGAHDRALQHYQNHLniaRELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDL-Q 510
Cdd:CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAM---RLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLpQ 107
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568935438 511 DMEGEGKVCHNLGYAHYCLGNYQ-------EAVKYYEQDLALA 546
Cdd:CHL00033 108 ALNNMAVICHYRGEQAIEQGDSEiaeawfdQAAEYWKQAIALA 150
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
397-425 |
2.61e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 37.40 E-value: 2.61e-03
10 20
....*....|....*....|....*....
gi 568935438 397 RAYGNMGNAYNALGMYDQAVKYHRQELQI 425
Cdd:pfam00515 2 KALYNLGNAYFKLGKYDEALEYYEKALEL 30
|
|
| COG4700 |
COG4700 |
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown]; |
401-506 |
2.66e-03 |
|
Uncharacterized conserved protein ECs_4300, contains TPR-like domain [Function unknown];
Pssm-ID: 443735 [Multi-domain] Cd Length: 249 Bit Score: 41.79 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 401 NMGNAYNALGMYDQAVKYHRQELQismevndRASQASTHG--NLAVAYQALGAHDRALQHyqnhlniARELRDIQSE--- 475
Cdd:COG4700 94 RLADALLELGRYDEAIELYEEALT-------GIFADDPHIllGLAQALFELGRYAEALET-------LEKLIAKNPDfks 159
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 568935438 476 -------ARALSNLGNFHCSRGEYVQAA---PYYEQYLRLA 506
Cdd:COG4700 160 sdahllyARALEALGDLEAAEAELEALArrySGPEARYRYA 200
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
444-541 |
2.86e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 39.59 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 444 VAYQALGAHDRALQHYQNhlnIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEgegKVCHNLG 523
Cdd:COG1729 1 KALLKAGDYDEAIAAFKA---FLKRYPNSPLAPDALYWLGEAYYALGDYDEAAEAFEKLLKRYPDSPKAP---DALLKLG 74
|
90
....*....|....*...
gi 568935438 524 YAHYCLGNYQEAVKYYEQ 541
Cdd:COG1729 75 LSYLELGDYDKARATLEE 92
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
85-497 |
3.42e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 42.92 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 85 GQELLTAGHHGASVVVLEAALKIGTCSL-------KLRGSVFSALSSAHWSLGNTEKSTGYMQQDLDVAKTLGDQTGECR 157
Cdd:COG3899 752 AEALYLAGRFEEAEALLERALAARALAAlaalrhgNPPASARAYANLGLLLLGDYEEAYEFGELALALAERLGDRRLEAR 831
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 158 AHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEAR 237
Cdd:COG3899 832 ALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAAALAAAAAAAARLLAAAAAALAAAAAAA 911
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 238 ELGnMGAVYIAMGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEKPIEMR 317
Cdd:COG3899 912 ALA-AAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAALAAALALAAAAAAAAAAALAAAAAAAAAAAAAAAAAA 990
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 318 AYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGR 397
Cdd:COG3899 991 LEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALLAAAAALALLAALAAAAAAAAAAAALAAAAALLA 1070
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 398 AYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEAR 477
Cdd:COG3899 1071 AAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALAAALAALALAAAARAAAALLLLAAALALALAALL 1150
|
410 420
....*....|....*....|
gi 568935438 478 ALSNLGNFHCSRGEYVQAAP 497
Cdd:COG3899 1151 LLAALLLALALLLLALAALA 1170
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
517-548 |
3.80e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 37.02 E-value: 3.80e-03
10 20 30
....*....|....*....|....*....|..
gi 568935438 517 KVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD 548
Cdd:pfam00515 2 KALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
676-705 |
3.80e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.04 E-value: 3.80e-03
10 20 30
....*....|....*....|....*....|
gi 568935438 676 CRAHGHLAAVYMALGKYTMAFKCYQEQLEL 705
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALEL 30
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
9-205 |
3.82e-03 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 42.29 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 9 KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMveaamkspmrdtleptyqqlqkmkldkspfvvvsvvGQEL 88
Cdd:COG3914 79 ALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNL------------------------------------GNLL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 89 LTAGHHGASVVVLEAALKIGtcslklrgsvfSALSSAHWSLGNTEKSTGYMQQDLDVAKT-LGDQTGECRAHGNLGSAFF 167
Cdd:COG3914 123 LALGRLEEALAALRRALALN-----------PDFAEAYLNLGEALRRLGRLEEAIAALRRaLELDPDNAEALNNLGNALQ 191
|
170 180 190
....*....|....*....|....*....|....*...
gi 568935438 168 SKGNYREALTNHRHqlVLAMKLKDREAASSALSSLGHV 205
Cdd:COG3914 192 DLGRLEEAIAAYRR--ALELDPDNADAHSNLLFALRQA 227
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
236-268 |
3.84e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.04 E-value: 3.84e-03
10 20 30
....*....|....*....|....*....|...
gi 568935438 236 ARELGNMGAVYIAMGDFENAVQCHEQHLRIAKD 268
Cdd:smart00028 1 AEALYNLGNAYLKLGDYDEALEYYEKALELDPN 33
|
|
| FxSxx_TPR |
NF040586 |
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about ... |
760-1088 |
3.99e-03 |
|
FxSxx-COOH system tetratricopeptide repeat protein; Members of this family are typically about 850 amino acids long, or 1300 long because of an additional N-terminal domain. Proteins have a P-loop motif, GxGGxGKT, near the N-terminus of the region covered by this HMM, and a region over 400 residues long of tetratricopeptide repeat sequence. The family is found regularly next to other components of FxSxx-COOH systems, which feature an FxsB family radical SAM protein and a protein modified by it, FxsA. Members of this FxsA family typically have an FxSxx motif as the final five amino acids.
Pssm-ID: 468560 [Multi-domain] Cd Length: 836 Bit Score: 42.60 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 760 RAYGNLGDCYEALGDYEEAikyYEqyLSVAqSLNRMQDQakayRGLGNGH--------------RATGSLQQALVCFEKR 825
Cdd:NF040586 435 RLRFHLANALRSLGRYEEA---RE--LDED-TLERQRRV----LGLGEDHphtlmtagglgadlRALGRFREALELDEET 504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 826 LVVAHEL-GE--------ASNKAQAYGELGSLHSQLGNYEQAiscLERQLNIARDMKDRALESdaACGLGGVYQQMGEYD 896
Cdd:NF040586 505 LERHRRVfGEdhprtlraANNLAVSLRLLGDYREALELDREV---LRRRRRVLGPDHPRTLLS--ANNLARDLRELGRYA 579
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 897 TALQY----HQLDLQIAEETDNPTcQGRAYGNLGLTYESLGTFERAV------------VYQEQH-LSIAAQMndlvakt 959
Cdd:NF040586 580 EALDLleeaLERYREVLGGPDHPD-TLRAAKSLAVALRRAGRLEEALelaedtyeryrrRFGPDHpDTLAAAL------- 651
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 960 vsysSLGRTHHALQNYSQAVMYLQEGL-RLAEQLGRRedeakirH--------GLGLSLWASGNLEEAQHQLYRASALFe 1030
Cdd:NF040586 652 ----SLANDLRALGDADEARELAREVLdRYRRVLGED-------HpftlacrnNLAVLLRALGDPEEARELAEAALEGL- 719
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 568935438 1031 tirhEAQLSTDYKLSLfdlqtSSYQALQRVLVSLGHHDEAL-AVAERGRTRAFADLLVE 1088
Cdd:NF040586 720 ----RERLGPDHPYTL-----AAAVNLANDLAALGDLDAALgEEALERLRRLLGEDLRA 769
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
2097-2235 |
5.18e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 41.98 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2097 PILSHQRSQLSPLTVKPQPPARSSSLPKVSSPATSEvsgkdglsppgsshpspgrdTPVSPADPplFRLKYPSSPYSAHI 2176
Cdd:PTZ00449 563 PAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPK--------------------RPRSAQRP--TRPKSPKLPELLDI 620
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568935438 2177 SKSPRN----TSPAcSAPSPalsyssagSARSSPadapdEKVQAVHSLKmlwqsTPQPPRGPR 2235
Cdd:PTZ00449 621 PKSPKRpespKSPK-RPPPP--------QRPSSP-----ERPEGPKIIK-----SPKPPKSPK 664
|
|
| TPR_7 |
pfam13176 |
Tetratricopeptide repeat; |
438-471 |
5.79e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 433012 [Multi-domain] Cd Length: 36 Bit Score: 36.36 E-value: 5.79e-03
10 20 30
....*....|....*....|....*....|....
gi 568935438 438 THGNLAVAYQALGAHDRALQHYQNHLNIARELRD 471
Cdd:pfam13176 1 ALLNLGRIYRKLGDYDEAISLYEQALALAKDPYD 34
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
276-308 |
5.85e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 36.24 E-value: 5.85e-03
10 20 30
....*....|....*....|....*....|...
gi 568935438 276 ARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE 308
Cdd:pfam00515 1 AKALYNLGNAYFKLGKYDEALEYYEKALELNPN 33
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1961-2233 |
6.17e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 6.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 1961 SPDPKQPCVKAPGGVRLSVSSKGSVSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVK--SQEESTPK 2038
Cdd:PHA03307 178 SPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCgwGPENECPL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2039 LDPQELAQRILEETKSHLLAVERLQRSGGPAGPDREDSVVAPSSTTVFRASETSAFSKPILShqrsqlspltvkpqpPAR 2118
Cdd:PHA03307 258 PRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSS---------------SSR 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 2119 SSSLPKVSSpaTSEVSGKDGLSPPGSSHPSPGRDTPVSPADPPLFR-----LKYPSSPYSAHISKSPRNTSPACSAPS-P 2192
Cdd:PHA03307 323 ESSSSSTSS--SSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRkrprpSRAPSSPAASAGRPTRRRARAAVAGRArR 400
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568935438 2193 ALSYSSAGSARSSP----ADAPDEKVQAVHSLKML----WQSTPQPPRG 2233
Cdd:PHA03307 401 RDATGRFPAGRPRPspldAGAASGAFYARYPLLTPsgepWPGSPPPPPG 449
|
|
| TPR_10 |
pfam13374 |
Tetratricopeptide repeat; |
520-550 |
6.55e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 463861 [Multi-domain] Cd Length: 42 Bit Score: 36.33 E-value: 6.55e-03
10 20 30
....*....|....*....|....*....|.
gi 568935438 520 HNLGYAHYCLGNYQEAVKYYEQDLALAKDLH 550
Cdd:pfam13374 6 NNLANALRAQGRYDEAEELLEEALAIRERVL 36
|
|
| TPR_MalT |
pfam17874 |
MalT-like TPR region; This entry contains a series of TPR repeats. |
191-470 |
7.46e-03 |
|
MalT-like TPR region; This entry contains a series of TPR repeats.
Pssm-ID: 436107 [Multi-domain] Cd Length: 336 Bit Score: 41.14 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 191 DREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAKDLG 270
Cdd:pfam17874 35 DLLARGLATFVLGEAYLCLGDLDAALQAMREAEALARRADSPHVTLWALLQQGEILRAQGRLHQALETYQQALQLARDHG 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 271 SKREEA--RAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEKpIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAE- 347
Cdd:pfam17874 115 LQHLPLhgFLLVGLADLLYEWNDLEEAEQHAQQGIQLGRQWEPD-AAVDAYVLLARIALAQGELEEALTLLRRAELLARq 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568935438 348 -----DLKDRAAEGRAssnlgIIHQMKGDYDTALK-LHKTHLciaQELSDYAAQGRAYGNMGNAYNALGMYDQAvkyhrq 421
Cdd:pfam17874 194 sffhvDWLANAERVRV-----RLWLARGDLRAAVRwLRAAEP---PSDADNHFLERELRNLARVLLALGRFDDA------ 259
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 568935438 422 eLQISMEVNDRA--SQASTHGN-----LAVAYQALGAHDRALQHYQNHLNIARELR 470
Cdd:pfam17874 260 -LSLLERLQNLAeqLGRVRSLIenlilQALALLALGRPDEALQALLDALSLAEPEG 314
|
|
| |
