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calpain-15 isoform X4 [Mus musculus]
Protein Classification
ZnF_RBZ and CysPc domain-containing protein ( domain architecture ID 10650946 )
ZnF_RBZ and CysPc domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
486-801
1.18e-125
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 387.07
E-value: 1.18e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 486 NIVAF C RENS V N F V D DS FPP GPA S V GF P -- VGDSVQQR V KQ W L RP H EI NCSVFRDH gt P WSVFHTLR PSD IL QG L LG N CW 563
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSN -- P RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 564 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G F L LFSQAQ R KQ LWVAL I EKA L A 640
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 641 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QVSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dda A YES 720
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 721 L GL RPR HAYSVLDVR D VQ -- G S RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R AE L MPH G SSE G V FWM EYS DF I R Y FD S 796
Cdd:cd00044 231 N GL VKG HAYSVLDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 569000976 797 VDI C K 801
Cdd:cd00044 311 LYV C N 315
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
424-448
2.84e-05
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 41.92
E-value: 2.84e-05
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
1.01e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 40.38
E-value: 1.01e-04
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
153-175
4.35e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 35.76
E-value: 4.35e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
354-376
6.98e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 6.98e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
7.40e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 7.40e-03
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
486-801
1.18e-125
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 387.07
E-value: 1.18e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 486 NIVAF C RENS V N F V D DS FPP GPA S V GF P -- VGDSVQQR V KQ W L RP H EI NCSVFRDH gt P WSVFHTLR PSD IL QG L LG N CW 563
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSN -- P RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 564 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G F L LFSQAQ R KQ LWVAL I EKA L A 640
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 641 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QVSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dda A YES 720
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 721 L GL RPR HAYSVLDVR D VQ -- G S RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R AE L MPH G SSE G V FWM EYS DF I R Y FD S 796
Cdd:cd00044 231 N GL VKG HAYSVLDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 569000976 797 VDI C K 801
Cdd:cd00044 311 LYV C N 315
Peptidase_C2
pfam00648 Calpain family cysteine protease;
498-801
2.35e-116
Calpain family cysteine protease;
Pssm-ID: 459889 [Multi-domain]
Cd Length: 295
Bit Score: 361.82
E-value: 2.35e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 498 F V D DS FP PGPA S V G F P VGDSVQQR V k Q W L RP H EI NCS - V F RDH G T pwsvfhtl RPS DI L QG L LG N CW F L S A L A V L AER P D 576
Cdd:pfam00648 1 F E D PE FP ADDS S L G Y P PSPPPPRG V - E W K RP K EI CSN p Q F IVD G A -------- SRF DI C QG E LG D CW L L A A I A S L TLN P K 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 577 L V ERV MVTR --- SLCAE G AYQV R LCKD G T W TT V LV DD M LP C d EA G F LLF SQ - AQRKQL W V AL I EKA L AKLHGSY F AL QA G 652
Cdd:pfam00648 72 L L ERV VPPD qsf EENYA G IFHF R FWRF G E W VD V VI DD R LP T - RN G K LLF VH s RDKNEF W S AL L EKA Y AKLHGSY E AL KG G 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 653 RAI E G L ATL TG APC ES LA L QVSST N preepvdtdl IWAKM L SSK E A G F LMG A S CGGGNMK v DDA A YESL GL RPR HAYSV L 732
Cdd:pfam00648 151 STS E A L EDF TG GVA ES YD L KEPPP N ---------- LFEIL L KAL E R G S LMG C S IDATSAA - EEE A RTPN GL VKG HAYSV T 219
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569000976 733 D VR D V ---- QGS RL L RLRNPWG RFS WNG S WSD EW P H W --- PGHLRA EL MPHGSSE G V FWM EYS DF IR YF DSVD IC K 801
Cdd:pfam00648 220 G VR K V nlkg GKV RL I RLRNPWG EVE WNG A WSD GS P E W qtv SPEEKE EL GLTKKDD G E FWM SFE DF LK YF TDLE IC N 295
CysPc
smart00230 Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). ...
484-811
8.22e-115
Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Pssm-ID: 128526
Cd Length: 318
Bit Score: 358.56
E-value: 8.22e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 484 W E NIVAF C R E NSVN F V D DS FP PGPA S VG F pvg DSV Q QRVKQ W L RPHEI NC svfrdh GT P WS V F h TLRPS DI L QG L LG N CW 563
Cdd:smart00230 1 Y E ALRQY C K E SGTL F E D PL FP ANNG S LF F --- SQR Q RKFVV W K RPHEI FE ------ NP P FI V G - GASRT DI C QG V LG D CW 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 564 F L S ALA V L AE R PD L VE RV MV - TRSLCAE -- G AYQV R LCKD G T W TT V LV DD M LP CDEAGFLLFSQAQ R KQL W V AL I EKA L A 640
Cdd:smart00230 71 L L A ALA S L TL R EK L LD RV IP h DQEFSEN ya G IFHF R FWRF G K W VD V VI DD R LP TYNGELVFMHSNS R NEF W S AL L EKA Y A 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 641 KL H G S Y F AL QA G RAI E G L AT LTG APC ES LA L QVS S TN P RE epvdtdl IWAKMLSSK E A G F LMG A S C G G G N m K V DDAAYES 720
Cdd:smart00230 151 KL N G C Y E AL KG G STT E A L ED LTG GVA ES ID L KEA S KD P DN ------- LFEDLFKAF E R G S LMG C S I G A G T - A V EEEEQKD 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 721 L GL RPR HAYSV L DVR D VQG S R -- LLRLRNPWG RFS WNG S WSD EW P H W --- PGHLRAE L MPHGSSE G V FWM EYS DF I R Y FD 795
Cdd:smart00230 223 C GL VKG HAYSV T DVR E VQG R R qe LLRLRNPWG QVE WNG P WSD DS P E W rsv SASEKKN L GLTFDDD G E FWM SFE DF L R H FD 302
330
....*....|....*.
gi 569000976 796 S V D IC KVHS D WQ E A R V 811
Cdd:smart00230 303 K V E IC NLNP D SL E E R S 318
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
424-448
2.84e-05
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 41.92
E-value: 2.84e-05
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
1.01e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 40.38
E-value: 1.01e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
422-448
1.31e-04
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 40.03
E-value: 1.31e-04
10 20
....*....|....*....|....*..
gi 569000976 422 R P G Q W A C PA C TLI N TPRAKH C A AC HT P 448
Cdd:pfam00641 1 R E G D W D C SK C LVQ N FATSTK C V AC QA P 27
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
153-175
4.35e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 35.76
E-value: 4.35e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
354-376
6.98e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 6.98e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
7.40e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 7.40e-03
Name
Accession
Description
Interval
E-value
CysPc
cd00044 Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. ...
486-801
1.18e-125
Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Pssm-ID: 238004 [Multi-domain]
Cd Length: 315
Bit Score: 387.07
E-value: 1.18e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 486 NIVAF C RENS V N F V D DS FPP GPA S V GF P -- VGDSVQQR V KQ W L RP H EI NCSVFRDH gt P WSVFHTLR PSD IL QG L LG N CW 563
Cdd:cd00044 1 TLLQI C LLSG V L F E D PD FPP NDS S L GF D ds LSNGQPKK V IE W K RP S EI FADDGNSN -- P RLFVNGAS PSD VC QG I LG D CW 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 564 FL S ALA V LAERP D L VE RV MVTRSL --- CAE G A Y QV R LC K D G T W TT V LV DD M LP CDEA G F L LFSQAQ R KQ LWVAL I EKA L A 640
Cdd:cd00044 79 FL A ALA A LAERP E L LK RV IPPDQS fee NYA G I Y HF R FW K N G E W VE V VI DD R LP TSNG G L L FMHSRD R NE LWVAL L EKA Y A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 641 KLHGSY F AL QA G RAI E G L AT LTG A P C E SLA L QVSST npree PVDTDLIW A KM LS SKEA G F L M G A S C G GGNMKV dda A YES 720
Cdd:cd00044 159 KLHGSY E AL VG G NTA E A L ED LTG G P T E RID L KSADA ----- SSGDNDLF A LL LS FLQG G S L I G C S T G SRSEEE --- A RTA 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 721 L GL RPR HAYSVLDVR D VQ -- G S RLLRLRNPWG RFS W N G S WSD EWPH W -- PGHL R AE L MPH G SSE G V FWM EYS DF I R Y FD S 796
Cdd:cd00044 231 N GL VKG HAYSVLDVR E VQ ee G L RLLRLRNPWG VGE W W G G WSD DSSE W wv IDAE R KK L LLS G KDD G E FWM SFE DF L R N FD G 310
....*
gi 569000976 797 VDI C K 801
Cdd:cd00044 311 LYV C N 315
Peptidase_C2
pfam00648 Calpain family cysteine protease;
498-801
2.35e-116
Calpain family cysteine protease;
Pssm-ID: 459889 [Multi-domain]
Cd Length: 295
Bit Score: 361.82
E-value: 2.35e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 498 F V D DS FP PGPA S V G F P VGDSVQQR V k Q W L RP H EI NCS - V F RDH G T pwsvfhtl RPS DI L QG L LG N CW F L S A L A V L AER P D 576
Cdd:pfam00648 1 F E D PE FP ADDS S L G Y P PSPPPPRG V - E W K RP K EI CSN p Q F IVD G A -------- SRF DI C QG E LG D CW L L A A I A S L TLN P K 71
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 577 L V ERV MVTR --- SLCAE G AYQV R LCKD G T W TT V LV DD M LP C d EA G F LLF SQ - AQRKQL W V AL I EKA L AKLHGSY F AL QA G 652
Cdd:pfam00648 72 L L ERV VPPD qsf EENYA G IFHF R FWRF G E W VD V VI DD R LP T - RN G K LLF VH s RDKNEF W S AL L EKA Y AKLHGSY E AL KG G 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 653 RAI E G L ATL TG APC ES LA L QVSST N preepvdtdl IWAKM L SSK E A G F LMG A S CGGGNMK v DDA A YESL GL RPR HAYSV L 732
Cdd:pfam00648 151 STS E A L EDF TG GVA ES YD L KEPPP N ---------- LFEIL L KAL E R G S LMG C S IDATSAA - EEE A RTPN GL VKG HAYSV T 219
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569000976 733 D VR D V ---- QGS RL L RLRNPWG RFS WNG S WSD EW P H W --- PGHLRA EL MPHGSSE G V FWM EYS DF IR YF DSVD IC K 801
Cdd:pfam00648 220 G VR K V nlkg GKV RL I RLRNPWG EVE WNG A WSD GS P E W qtv SPEEKE EL GLTKKDD G E FWM SFE DF LK YF TDLE IC N 295
CysPc
smart00230 Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). ...
484-811
8.22e-115
Calpain-like thiol protease family; Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Pssm-ID: 128526
Cd Length: 318
Bit Score: 358.56
E-value: 8.22e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 484 W E NIVAF C R E NSVN F V D DS FP PGPA S VG F pvg DSV Q QRVKQ W L RPHEI NC svfrdh GT P WS V F h TLRPS DI L QG L LG N CW 563
Cdd:smart00230 1 Y E ALRQY C K E SGTL F E D PL FP ANNG S LF F --- SQR Q RKFVV W K RPHEI FE ------ NP P FI V G - GASRT DI C QG V LG D CW 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 564 F L S ALA V L AE R PD L VE RV MV - TRSLCAE -- G AYQV R LCKD G T W TT V LV DD M LP CDEAGFLLFSQAQ R KQL W V AL I EKA L A 640
Cdd:smart00230 71 L L A ALA S L TL R EK L LD RV IP h DQEFSEN ya G IFHF R FWRF G K W VD V VI DD R LP TYNGELVFMHSNS R NEF W S AL L EKA Y A 150
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 641 KL H G S Y F AL QA G RAI E G L AT LTG APC ES LA L QVS S TN P RE epvdtdl IWAKMLSSK E A G F LMG A S C G G G N m K V DDAAYES 720
Cdd:smart00230 151 KL N G C Y E AL KG G STT E A L ED LTG GVA ES ID L KEA S KD P DN ------- LFEDLFKAF E R G S LMG C S I G A G T - A V EEEEQKD 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569000976 721 L GL RPR HAYSV L DVR D VQG S R -- LLRLRNPWG RFS WNG S WSD EW P H W --- PGHLRAE L MPHGSSE G V FWM EYS DF I R Y FD 795
Cdd:smart00230 223 C GL VKG HAYSV T DVR E VQG R R qe LLRLRNPWG QVE WNG P WSD DS P E W rsv SASEKKN L GLTFDDD G E FWM SFE DF L R H FD 302
330
....*....|....*.
gi 569000976 796 S V D IC KVHS D WQ E A R V 811
Cdd:smart00230 303 K V E IC NLNP D SL E E R S 318
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
424-448
2.84e-05
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 41.92
E-value: 2.84e-05
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
5-29
1.01e-04
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 40.38
E-value: 1.01e-04
zf-RanBP
pfam00641 Zn-finger in Ran binding protein and others;
422-448
1.31e-04
Zn-finger in Ran binding protein and others;
Pssm-ID: 395516 [Multi-domain]
Cd Length: 30
Bit Score: 40.03
E-value: 1.31e-04
10 20
....*....|....*....|....*..
gi 569000976 422 R P G Q W A C PA C TLI N TPRAKH C A AC HT P 448
Cdd:pfam00641 1 R E G D W D C SK C LVQ N FATSTK C V AC QA P 27
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
153-175
4.35e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 35.76
E-value: 4.35e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
354-376
6.98e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 6.98e-03
ZnF_RBZ
smart00547 Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
47-69
7.40e-03
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Pssm-ID: 197784 [Multi-domain]
Cd Length: 25
Bit Score: 34.99
E-value: 7.40e-03
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
