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Conserved domains on  [gi|568959006|ref|XP_006510152|]
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proprotein convertase subtilisin/kexin type 7 isoform X3 [Mus musculus]

Protein Classification

S8_pro-domain and Peptidases_S8_Protein_convertases_Kexins_Furin-lik domain-containing protein( domain architecture ID 11242975)

S8_pro-domain and Peptidases_S8_Protein_convertases_Kexins_Furin-lik domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
144-377 1.86e-118

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


:

Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 346.08  E-value: 1.86e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 144 FNDPKYPQQWHLNNRRS----PGRDINVTGVWERNVTGRGVTVVVVDDGVEHTVQDIAPNYSPEGSYDLNSNDPDPMPHP 219
Cdd:cd04059    1 PNDPLFPYQWYLKNTGQaggtPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 220 DEENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGP 299
Cdd:cd04059   81 DDDNS--HGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959006 300 HQLGKAALQHGVMAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGG 377
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGG 236
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
52-140 2.64e-14

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


:

Pssm-ID: 465126  Cd Length: 77  Bit Score: 67.63  E-value: 2.64e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006   52 SWAVHLDSLEGE-----RKeesltqqadavaqaAGLVNAGRIGELQGHYLFVQP-TGHRQAMEVEAMrqqaEAVLARHEA 125
Cdd:pfam16470   1 EWAVHLEGGPEEadriaEK--------------HGFINLGQIGGLEDYYHFRHRrVSKRSKRSLRHK----HSRLKKDPK 62
                          90
                  ....*....|....*
gi 568959006  126 VRWHSEQTLLKRAKR 140
Cdd:pfam16470  63 VKWAEQQRGKKRVKR 77
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
144-377 1.86e-118

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 346.08  E-value: 1.86e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 144 FNDPKYPQQWHLNNRRS----PGRDINVTGVWERNVTGRGVTVVVVDDGVEHTVQDIAPNYSPEGSYDLNSNDPDPMPHP 219
Cdd:cd04059    1 PNDPLFPYQWYLKNTGQaggtPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 220 DEENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGP 299
Cdd:cd04059   81 DDDNS--HGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959006 300 HQLGKAALQHGVMAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGG 377
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGG 236
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
195-355 1.37e-25

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 104.85  E-value: 1.37e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  195 DIAPNYSPEGSYDLNSNDPDPmpHPDEENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGP---LTDSMEAV 271
Cdd:pfam00082  25 DNDPSDDPEASVDFNNEWDDP--RDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGAKILGVRVFGDGggtDAITAQAI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  272 AFNKHyQINDIYSCSWGPDddgKTVDGPHQLGKAALQHGvmaGRQGFGSIFVVASGNGGQhNDNCNYDGY--ANSIYTVT 349
Cdd:pfam00082 103 SWAIP-QGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGSP-GGNNGSSVGypAQYKNVIA 174

                  ....*.
gi 568959006  350 IGAVDE 355
Cdd:pfam00082 175 VGAVDE 180
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
204-362 1.30e-16

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 81.30  E-value: 1.30e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 204 GSYDLNSNDPDPMphpdeeNGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD----GPLTDSMEAVAFNKHYQI 279
Cdd:COG1404  133 GGYDFVDGDGDPS------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdngsGTTSDIAAAIDWAADNGA 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 280 nDIYSCSWGPDDDGKTvdgphQLGKAALQHGVMAgrqgfGSIFVVASGNGGQHNDNCNYdgYANSIYTVTIGAVDEEGRM 359
Cdd:COG1404  207 -DVINLSLGGPADGYS-----DALAAAVDYAVDK-----GVLVVAAAGNSGSDDATVSY--PAAYPNVIAVGAVDANGQL 273

                 ...
gi 568959006 360 PFY 362
Cdd:COG1404  274 ASF 276
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
52-140 2.64e-14

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 67.63  E-value: 2.64e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006   52 SWAVHLDSLEGE-----RKeesltqqadavaqaAGLVNAGRIGELQGHYLFVQP-TGHRQAMEVEAMrqqaEAVLARHEA 125
Cdd:pfam16470   1 EWAVHLEGGPEEadriaEK--------------HGFINLGQIGGLEDYYHFRHRrVSKRSKRSLRHK----HSRLKKDPK 62
                          90
                  ....*....|....*
gi 568959006  126 VRWHSEQTLLKRAKR 140
Cdd:pfam16470  63 VKWAEQQRGKKRVKR 77
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
227-357 3.34e-04

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 42.31  E-value: 3.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  227 HGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD--------GPLTDSMEAVAFNKHYQIN---DIYSCSWGpddDGKT 295
Cdd:TIGR03921  53 HGTLVAGIIAGRPGEGDGFSGVAPDARILPIRQTSaafepdegTSGVGDLGTLAKAIRRAADlgaDVINISLV---ACLP 129
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959006  296 VDGPHQ---LGKA---ALQHGVmagrqgfgsIFVVASGNGGQhNDNCNYDGY-ANSIYTVTIGAVDEEG 357
Cdd:TIGR03921 130 AGSGADdpeLGAAvryALDKGV---------VVVAAAGNTGG-DGQKTTVVYpAWYPGVLAVGSIDRDG 188
 
Name Accession Description Interval E-value
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
144-377 1.86e-118

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 346.08  E-value: 1.86e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 144 FNDPKYPQQWHLNNRRS----PGRDINVTGVWERNVTGRGVTVVVVDDGVEHTVQDIAPNYSPEGSYDLNSNDPDPMPHP 219
Cdd:cd04059    1 PNDPLFPYQWYLKNTGQaggtPGLDLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 220 DEENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAFNKHYQINDIYSCSWGPDDDGKTVDGP 299
Cdd:cd04059   81 DDDNS--HGTRCAGEIAAVGNNGICGVGVAPGAKLGGIRMLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGP 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568959006 300 HQLGKAALQHGVMAGRQGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDEEGRMPFYAEECASMLAVTFSGG 377
Cdd:cd04059  159 GPLAQRALENGVTNGRNGKGSIFVWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSSVLASAPSGG 236
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
195-355 1.37e-25

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 104.85  E-value: 1.37e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  195 DIAPNYSPEGSYDLNSNDPDPmpHPDEENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGP---LTDSMEAV 271
Cdd:pfam00082  25 DNDPSDDPEASVDFNNEWDDP--RDDIDDKNGHGTHVAGIIAAGGNNSIGVSGVAPGAKILGVRVFGDGggtDAITAQAI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  272 AFNKHyQINDIYSCSWGPDddgKTVDGPHQLGKAALQHGvmaGRQGFGSIFVVASGNGGQhNDNCNYDGY--ANSIYTVT 349
Cdd:pfam00082 103 SWAIP-QGADVINMSWGSD---KTDGGPGSWSAAVDQLG---GAEAAGSLFVWAAGNGSP-GGNNGSSVGypAQYKNVIA 174

                  ....*.
gi 568959006  350 IGAVDE 355
Cdd:pfam00082 175 VGAVDE 180
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
198-362 6.98e-19

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 85.09  E-value: 6.98e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 198 PNYSPEGSYDLNSNDPDPMPHPDEENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD--GPLTDSMEAVAFNK 275
Cdd:cd07498   15 PDLSGKPKLVPGWNFVSNNDPTSDIDG--HGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRIADslGYAYWSDIAQAITW 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 276 HYQIN-DIYSCSWGPDDDGKTVdgphqlgKAALQHGVMAGRQGFGSIFVVASGNGGQHNDNcnydGYANSIYTVTIGAVD 354
Cdd:cd07498   93 AADNGaDVISNSWGGSDSTESI-------SSAIDNAATYGRNGKGGVVLFAAGNSGRSVSS----GYAANPSVIAVAATD 161

                 ....*...
gi 568959006 355 EEGRMPFY 362
Cdd:cd07498  162 SNDARASY 169
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
206-360 6.81e-18

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 82.63  E-value: 6.81e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 206 YDLNSNDPDPMPhpdeENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD----GPLTDSMEAVAFNKHYQInD 281
Cdd:cd07473   50 WNFVNNDNDPMD----DNG--HGTHVAGIIGAVGNNGIGIAGVAWNVKIMPLKFLGadgsGTTSDAIKAIDYAVDMGA-K 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 282 IYSCSWGPdddgktvDGPHQLGKAALQHgvmAGRQgfGSIFVVASGNGGQHNDN-----CNYDgYANSIytvTIGAVDEE 356
Cdd:cd07473  123 IINNSWGG-------GGPSQALRDAIAR---AIDA--GILFVAAAGNDGTNNDKtptypASYD-LDNII---SVAATDSN 186

                 ....
gi 568959006 357 GRMP 360
Cdd:cd07473  187 DALA 190
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
204-362 1.30e-16

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 81.30  E-value: 1.30e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 204 GSYDLNSNDPDPMphpdeeNGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD----GPLTDSMEAVAFNKHYQI 279
Cdd:COG1404  133 GGYDFVDGDGDPS------DDNGHGTHVAGIIAANGNNGGGVAGVAPGAKLLPVRVLDdngsGTTSDIAAAIDWAADNGA 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 280 nDIYSCSWGPDDDGKTvdgphQLGKAALQHGVMAgrqgfGSIFVVASGNGGQHNDNCNYdgYANSIYTVTIGAVDEEGRM 359
Cdd:COG1404  207 -DVINLSLGGPADGYS-----DALAAAVDYAVDK-----GVLVVAAAGNSGSDDATVSY--PAAYPNVIAVGAVDANGQL 273

                 ...
gi 568959006 360 PFY 362
Cdd:COG1404  274 ASF 276
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
202-362 4.50e-16

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 77.24  E-value: 4.50e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 202 PEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCaVGVAYGSRIAGIRVLD----GPLTDSMEAVAFNKHY 277
Cdd:cd00306   21 FGGGDGGNDDDDNENGPTDPDDGNGHGTHVAGIIAASANNGGG-VGVAPGAKLIPVKVLDgdgsGSSSDIAAAIDYAAAD 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 278 QINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVmagrqgfgsIFVVASGNGGQHNDNcNYDGYANSIYTVTIGAVDEEG 357
Cdd:cd00306  100 QGADVINLSLGGPGSPPSSALSEAIDYALAKLGV---------LVVAAAGNDGPDGGT-NIGYPAASPNVIAVGAVDRDG 169

                 ....*
gi 568959006 358 RMPFY 362
Cdd:cd00306  170 TPASP 174
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
145-362 1.18e-14

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 73.45  E-value: 1.18e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 145 NDPKYPQQWHLNNrrspgrdINVTGVWERNVTGRGVTvvvvddgvehTVQD--IAPNYsPE-------GSYDLNSNDPDP 215
Cdd:cd07484    3 NDPYYSYQWNLDQ-------IGAPKAWDITGGSGVTV----------AVVDtgVDPTH-PDllkvkfvLGYDFVDNDSDA 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 216 MPhpdeENGnhHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLDGPLTDSMEAVAfnkhyqiNDIYscsWGPDDDGKT 295
Cdd:cd07484   65 MD----DNG--HGTHVAGIIAAATNNGTGVAGVAPKAKIMPVKVLDANGSGSLADIA-------NGIR---YAADKGAKV 128
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568959006 296 VD----GPhqLGKAALQHGVM-AGRQgfGSIFVVASGNGGQhnDNCNYDgyANSIYTVTIGAVDEEGRMPFY 362
Cdd:cd07484  129 INlslgGG--LGSTALQEAINyAWNK--GVVVVAAAGNEGV--SSVSYP--AAYPGAIAVAATDQDDKRASF 192
S8_pro-domain pfam16470
Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to ...
52-140 2.64e-14

Peptidase S8 pro-domain; This domain is the pro-domain of several peptidases belonging to family S8.


Pssm-ID: 465126  Cd Length: 77  Bit Score: 67.63  E-value: 2.64e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006   52 SWAVHLDSLEGE-----RKeesltqqadavaqaAGLVNAGRIGELQGHYLFVQP-TGHRQAMEVEAMrqqaEAVLARHEA 125
Cdd:pfam16470   1 EWAVHLEGGPEEadriaEK--------------HGFINLGQIGGLEDYYHFRHRrVSKRSKRSLRHK----HSRLKKDPK 62
                          90
                  ....*....|....*
gi 568959006  126 VRWHSEQTLLKRAKR 140
Cdd:pfam16470  63 VKWAEQQRGKKRVKR 77
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
193-362 2.86e-10

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 60.42  E-value: 2.86e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 193 V----QDIAPNYSP------EGSYDLNSNDPDPMPHPDEENgnhHGTRCAGEIAAVPNNSFcAVGVAYGSRIAGIRVLDG 262
Cdd:cd04848    7 VgvidSGIDLSHPEfagrvsEASYYVAVNDAGYASNGDGDS---HGTHVAGVIAAARDGGG-MHGVAPDATLYSARASAS 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 263 PLTDSMEAVAFNKHYQIND----IYSCSWGPDDDGKTVDGPHQLGKAALQHGVMAGRQGF---GSIFVVASGNGGQHNDN 335
Cdd:cd04848   83 AGSTFSDADIAAAYDFLAAsgvrIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAanaGGLFVFAAGNDGQANPS 162
                        170       180       190
                 ....*....|....*....|....*....|....
gi 568959006 336 CN-------YDGYANSIYTVtiGAVDEEGRMPFY 362
Cdd:cd04848  163 LAaaalpylEPELEGGWIAV--VAVDPNGTIASY 194
Peptidases_S8_Fervidolysin_like cd07485
Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans ...
192-340 4.29e-09

Peptidase S8 family domain in Fervidolysin; Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173811 [Multi-domain]  Cd Length: 273  Bit Score: 57.11  E-value: 4.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 192 TVQDIAPNYSPEGsYDLNSNDPDPMPHP-----DEENGNHHGTRCAGEIAAVPNNSF------CAVGVAYGSRIAGIRVL 260
Cdd:cd07485   24 THPDLQGNGDGDG-YDPAVNGYNFVPNVgdidnDVSVGGGHGTHVAGTIAAVNNNGGgvggiaGAGGVAPGVKIMSIQIF 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 261 DG--PLTDSMEAVAFnkhYQIND----IYSCSWGpdddGKTVDGPHQLGKAALQHGVMAGRQGF--GSIFVVASGN--GG 330
Cdd:cd07485  103 AGryYVGDDAVAAAI---VYAADngavILQNSWG----GTGGGIYSPLLKDAFDYFIENAGGSPldGGIVVFSAGNsyTD 175
                        170
                 ....*....|
gi 568959006 331 QHNDNCNYDG 340
Cdd:cd07485  176 EHRFPAAYPG 185
Peptidases_S8_13 cd07496
Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the ...
198-363 9.18e-08

Peptidase S8 family domain, uncharacterized subfamily 13; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173820 [Multi-domain]  Cd Length: 285  Bit Score: 53.07  E-value: 9.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 198 PNYSPEGSYDLNSNDPDPMPHPDE-ENGNHHGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVL---DGPLTDSMEAVAF 273
Cdd:cd07496   43 SDPTDPGDWVTGDDVPPGGFCGSGvSPSSWHGTHVAGTIAAVTNNGVGVAGVAWGARILPVRVLgkcGGTLSDIVDGMRW 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 274 nkhyqindiyscSWGPDDDGKTVD-----------GPHQLGKAALQHGVMAGRQGfGSIFVVASGNGGQHNDN---CNYD 339
Cdd:cd07496  123 ------------AAGLPVPGVPVNpnpakvinlslGGDGACSATMQNAINDVRAR-GVLVVVAAGNEGSSASVdapANCR 189
                        170       180
                 ....*....|....*....|....
gi 568959006 340 GyansiyTVTIGAVDEEGRMPFYA 363
Cdd:cd07496  190 G------VIAVGATDLRGQRASYS 207
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
195-357 1.48e-07

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 51.76  E-value: 1.48e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 195 DIAPNYspEGSYDLNSNDPDpmphpDEENGNHHGTRCAGEIAAVPNNsFCAVGVAYGSRIAGIRVLD----GPLTDSMEA 270
Cdd:cd07477   17 DLKLNI--VGGANFTGDDNN-----DYQDGNGHGTHVAGIIAALDNG-VGVVGVAPEADLYAVKVLNddgsGTYSDIIAG 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 271 V--AFNKHYqinDIYSCSWGPDDDGKTVdgpHQLGKAALQHGVmagrqgfgsIFVVASGNGGQHNDNCNYDGYANSiyTV 348
Cdd:cd07477   89 IewAIENGM---DIINMSLGGPSDSPAL---REAIKKAYAAGI---------LVVAAAGNSGNGDSSYDYPAKYPS--VI 151

                 ....*....
gi 568959006 349 TIGAVDEEG 357
Cdd:cd07477  152 AVGAVDSNN 160
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
211-368 2.63e-06

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 48.35  E-value: 2.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 211 NDPDPMPHPDEENGnhHGTRCAGEIA---AVPNNSFCavGVAYGSRIAGIRVLD----GPLTDSMEA----VAFNKHYQI 279
Cdd:cd07487   32 NTVNGRTTPYDDNG--HGTHVAGIIAgsgRASNGKYK--GVAPGANLVGVKVLDdsgsGSESDIIAGidwvVENNEKYNI 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 280 nDIYSCSWGPDDDGKTVDGPhqlgkaaLQHGVMAGRQGfGSIFVVASGNGGQHNDNCNYDGyaNSIYTVTIGAVDEEGRM 359
Cdd:cd07487  108 -RVVNLSLGAPPDPSYGEDP-------LCQAVERLWDA-GIVVVVAAGNSGPGPGTITSPG--NSPKVITVGAVDDNGPH 176

                 ....*....
gi 568959006 360 PFYAEECAS 368
Cdd:cd07487  177 DDGISYFSS 185
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
220-362 7.48e-06

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 47.13  E-value: 7.48e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 220 DEENGNHHGTRCAGEIAAVpnnsfcAVGVAYGSRIAGIRVLD----GPLTDSMEAVAfnkhYQINDIYSC--------SW 287
Cdd:cd04077   58 PDSDCNGHGTHVAGTVGGK------TYGVAKKANLVAVKVLDcngsGTLSGIIAGLE----WVANDATKRgkpavanmSL 127
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568959006 288 GPDDDgKTVDgphqlgkAALQHGVMAgrqgfGSIFVVASGNGGQhnDNCNYDGyANSIYTVTIGAVDEEGRMPFY 362
Cdd:cd04077  128 GGGAS-TALD-------AAVAAAVNA-----GVVVVVAAGNSNQ--DACNYSP-ASAPEAITVGATDSDDARASF 186
Peptidases_S8_subtilisin_Vpr-like cd07474
Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic ...
204-387 3.03e-05

Peptidase S8 family domain in Vpr-like proteins; The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173800 [Multi-domain]  Cd Length: 295  Bit Score: 45.40  E-value: 3.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 204 GSYDLNSNDPDPM---PHPDEENGNH------HGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD----GPLTDSMEA 270
Cdd:cd07474   32 GGYDFVDDDYDPMdtrPYPSPLGDASagdatgHGTHVAGIIAGNGVNVGTIKGVAPKADLYAYKVLGpggsGTTDVIIAA 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 271 V--AFNKHYQINDIYScswgpdddGKTVDGPHQLGKAALQHGVMAGrqgfgsIFVVAS-GNGGqhNDNCNYDGYANSIYT 347
Cdd:cd07474  112 IeqAVDDGMDVINLSL--------GSSVNGPDDPDAIAINNAVKAG------VVVVAAaGNSG--PAPYTIGSPATAPSA 175
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 568959006 348 VTIGAVDEEGRMPfyaeecASMLAVTFSGGDKMLRSILCP 387
Cdd:cd07474  176 ITVGASTVADVAE------ADTVGPSSSRGPPTSDSAIKP 209
T7SS_mycosin TIGR03921
type VII secretion-associated serine protease mycosin; Members of this family are ...
227-357 3.34e-04

type VII secretion-associated serine protease mycosin; Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair]


Pssm-ID: 274856 [Multi-domain]  Cd Length: 350  Bit Score: 42.31  E-value: 3.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006  227 HGTRCAGEIAAVPNNSFCAVGVAYGSRIAGIRVLD--------GPLTDSMEAVAFNKHYQIN---DIYSCSWGpddDGKT 295
Cdd:TIGR03921  53 HGTLVAGIIAGRPGEGDGFSGVAPDARILPIRQTSaafepdegTSGVGDLGTLAKAIRRAADlgaDVINISLV---ACLP 129
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568959006  296 VDGPHQ---LGKA---ALQHGVmagrqgfgsIFVVASGNGGQhNDNCNYDGY-ANSIYTVTIGAVDEEG 357
Cdd:TIGR03921 130 AGSGADdpeLGAAvryALDKGV---------VVVAAAGNTGG-DGQKTTVVYpAWYPGVLAVGSIDRDG 188
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
205-357 6.29e-04

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 40.99  E-value: 6.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 205 SYDLNSNDPDPMPHpdeeNGNHHGTRCAGEIAaVPNNSFCAVGVAYGSRIAGIRVLDG------PLTDSME-AVAfnkhy 277
Cdd:cd07490   27 DFDENRRISATEVF----DAGGHGTHVSGTIG-GGGAKGVYIGVAPEADLLHGKVLDDgggslsQIIAGMEwAVE----- 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 278 QINDIYSCSWGPDDdgkTVDGPhqlgkaaLQHGVMAGRQGFGSIFVVASGNGGQHNDNCNYDGYAnsiyTVTIGAVDEEG 357
Cdd:cd07490   97 KDADVVSMSLGGTY---YSEDP-------LEEAVEALSNQTGALFVVSAGNEGHGTSGSPGSAYA----ALSVGAVDRDD 162
Peptidases_S8_Lantibiotic_specific_protease cd07482
Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific ...
199-330 2.57e-03

Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases; Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173808 [Multi-domain]  Cd Length: 294  Bit Score: 39.27  E-value: 2.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568959006 199 NYSPEGSYDLNSNDpDPMPHPDEENGNHHGTRCAGEIAAVPNNSfcavGVAYGSRIAGIRVLD----GPLTDSMEAV--A 272
Cdd:cd07482   28 NLVPKGGYDGKEAG-ETGDINDIVDKLGHGTAVAGQIAANGNIK----GVAPGIGIVSYRVFGscgsAESSWIIKAIidA 102
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568959006 273 FNKHyqiNDIYSCSWG-----PDDDGKTVDGPHQLGKA---ALQHgvmagrqgfGSIFVVASGNGG 330
Cdd:cd07482  103 ADDG---VDVINLSLGgyliiGGEYEDDDVEYNAYKKAinyAKSK---------GSIVVAAAGNDG 156
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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