U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

                           10        20        30
                   ....*....|....*....|....*....|....*
gi 568954134    86 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLL 120
Cdd:smart00451   1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVKKR 35

Splicing factor 3a, subunit 2 [RNA processing and modification];

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954134 179 EGKKHKKNAARVALLEQLGTSL--DLGELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTNLKNK 243
Cdd:COG5246   19 EIKKNKKRRSRQLLLEAYGQDLmdDPYLSKNHTGKYVCLLCKTKHLTEMSYVKHREGKKHKENSSRR 85

U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

                           10        20        30
                   ....*....|....*....|....*....|....*
gi 568954134    86 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLL 120
Cdd:smart00451   1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVKKR 35

Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localize in the nucleus, particularly the nucleolus. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localization.

                          10        20
                  ....*....|....*....|....*
gi 568954134  160 YCGLCAAWFNNPLMAQQHYEGKKHK 184
Cdd:pfam12171   3 YCVLCDKYFKSENALQNHLKSKKHK 27

U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

                           10        20        30
                   ....*....|....*....|....*....|.
gi 568954134    29 YCKVCSAQLISESQRVAHYESRKHASKVRLY 59
Cdd:smart00451   5 YCKLCNVTFTDEISVEAHLKGKKHKKNVKKR 35

Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding.

                          10        20
                  ....*....|....*....|....*
gi 568954134  212 YRCTTCSVSLNSIEQYHAHLQGSKH 236
Cdd:pfam12874   1 FYCELCNVTFNSESQLKSHLQGKKH 25

U1-like zinc finger; Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

                           10        20        30
                   ....*....|....*....|....*....|....*
gi 568954134    86 DKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLL 120
Cdd:smart00451   1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVKKR 35

Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localize in the nucleus, particularly the nucleolus. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localization.

                          10        20
                  ....*....|....*....|....*
gi 568954134  160 YCGLCAAWFNNPLMAQQHYEGKKHK 184
Cdd:pfam12171   3 YCVLCDKYFKSENALQNHLKSKKHK 27

Zinc-finger of C2H2 type; This is a zinc-finger domain with the CxxCx(12)Hx(6)H motif, found in multiple copies in a wide range of proteins from plants to metazoans. Some member proteins, particularly those from plants, are annotated as being RNA-binding.

                          10        20
                  ....*....|....*....|....
gi 568954134  160 YCGLCAAWFNNPLMAQQHYEGKKH 183
Cdd:pfam12874   2 YCELCNVTFNSESQLKSHLQGKKH 25

Splicing factor 3a, subunit 2 [RNA processing and modification];

                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954134 179 EGKKHKKNAARVALLEQLGTSL--DLGELRGLRRTYRCTTCSVSLNSIEQYHAHLQGSKHQTNLKNK 243
Cdd:COG5246   19 EIKKNKKRRSRQLLLEAYGQDLmdDPYLSKNHTGKYVCLLCKTKHLTEMSYVKHREGKKHKENSSRR 85

Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and is approximately 30 amino acids in length. The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localize in the nucleus, particularly the nucleolus. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localization.

                          10        20
                  ....*....|....*....|....
gi 568954134   29 YCKVCSAQLISESQRVAHYESRKH 52
Cdd:pfam12171   3 YCVLCDKYFKSENALQNHLKSKKH 26