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Conserved domains on  [gi|568950169|ref|XP_006507669|]
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CREB/ATF bZIP transcription factor isoform X1 [Mus musculus]

Protein Classification

bZIP domain-containing protein( domain architecture ID 229439)

basic leucine zipper (bZIP) domain-containing protein is found in many DNA binding eukaryotic proteins such as Maf transcription factor, Caenorhabditis elegans skinhead-1, Drosophila melanogaster Mabiki, and Homo sapiens bZIP transcriptional factor ATF-like 3

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
bZIP super family cl21462
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and ...
223-264 8.58e-15

Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


The actual alignment was detected with superfamily member cd14706:

Pssm-ID: 473870 [Multi-domain]  Cd Length: 54  Bit Score: 68.05  E-value: 8.58e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 568950169 223 RLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQAL 264
Cdd:cd14706   13 RENRLKKKEYVENLEKSVDKLKSENKELKKANKKLQKLVEEL 54
 
Name Accession Description Interval E-value
bZIP_CREBZF cd14706
Basic leucine zipper (bZIP) domain of CREBZF/Zhangfei transcription factor and similar ...
223-264 8.58e-15

Basic leucine zipper (bZIP) domain of CREBZF/Zhangfei transcription factor and similar proteins: a DNA-binding and dimerization domain; CREBZF (also called Zhangfei, ZF, LAZip, or SMILE) is a neuronal bZIP transcription factor that is involved in the infection cycle of herpes simplex virus (HSV) and related cellular processes. It suppresses the ability of the HSV transactivator VP16 to initiate the viral replicative cycle. CREBZF has also been implicated in the regulation of the human nerve growth factor receptor trkA and the tumor suppressor p53. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269854 [Multi-domain]  Cd Length: 54  Bit Score: 68.05  E-value: 8.58e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 568950169 223 RLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQAL 264
Cdd:cd14706   13 RENRLKKKEYVENLEKSVDKLKSENKELKKANKKLQKLVEEL 54
BRLZ smart00338
basic region leucin zipper;
226-269 4.90e-05

basic region leucin zipper;


Pssm-ID: 197664 [Multi-domain]  Cd Length: 65  Bit Score: 40.63  E-value: 4.90e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 568950169   226 RLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESR 269
Cdd:smart00338  21 RERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKLKSELE 64
bZIP_1 pfam00170
bZIP transcription factor; The Pfam entry includes the basic region and the leucine zipper ...
226-269 2.47e-03

bZIP transcription factor; The Pfam entry includes the basic region and the leucine zipper region.


Pssm-ID: 395118 [Multi-domain]  Cd Length: 60  Bit Score: 35.82  E-value: 2.47e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 568950169  226 RLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESR 269
Cdd:pfam00170  17 RQRKQAYIEELERRVKALEGENKTLRSELEELKKEVEKLKSKNK 60
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
236-283 5.00e-03

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 36.01  E-value: 5.00e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 568950169 236 LESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGLAR 283
Cdd:COG2919   34 LRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEERAREELGMVK 81
 
Name Accession Description Interval E-value
bZIP_CREBZF cd14706
Basic leucine zipper (bZIP) domain of CREBZF/Zhangfei transcription factor and similar ...
223-264 8.58e-15

Basic leucine zipper (bZIP) domain of CREBZF/Zhangfei transcription factor and similar proteins: a DNA-binding and dimerization domain; CREBZF (also called Zhangfei, ZF, LAZip, or SMILE) is a neuronal bZIP transcription factor that is involved in the infection cycle of herpes simplex virus (HSV) and related cellular processes. It suppresses the ability of the HSV transactivator VP16 to initiate the viral replicative cycle. CREBZF has also been implicated in the regulation of the human nerve growth factor receptor trkA and the tumor suppressor p53. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269854 [Multi-domain]  Cd Length: 54  Bit Score: 68.05  E-value: 8.58e-15
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 568950169 223 RLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQAL 264
Cdd:cd14706   13 RENRLKKKEYVENLEKSVDKLKSENKELKKANKKLQKLVEEL 54
bZIP_ATF6 cd14700
Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar ...
224-262 1.22e-08

Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain; ATF-6 is a type I membrane-bound Basic leucine zipper (bZIP) transcription factor that binds to the consensus ER stress response element (ERSE) and enhances the transcription of genes encoding glucose-regulated proteins Grp78, Grp94, and calreticulum. ATF-6 is one of three sensors of the unfolded protein response (UPR) in metazoans; the others being the kinases Ire1 and PERK. It contains an ER-lumenal domain that detects unfolded proteins. In response to ER stress, ATF-6 translocates from the ER to the Golgi with simultaneous cleavage in a process called regulated intramembrane proteolysis (Rip) to its transcriptionally competent form, which enters the nucleus and upregulates target UPR genes. The three UPR sensor branches cross-communicate to form a signaling network. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269848 [Multi-domain]  Cd Length: 52  Bit Score: 50.74  E-value: 1.22e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 568950169 224 LNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQ 262
Cdd:cd14700   14 LSRKKKKEYVQSLETKLEQLKQENQKLKSENETLRERLS 52
bZIP_CREB3 cd14689
Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) ...
226-275 5.59e-07

Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain; This subfamily is composed of CREB3 (also called LZIP or Luman), and the CREB3-like proteins CREB3L1 (or OASIS), CREB3L2, CREB3L3 (or CREBH), and CREB3L4 (or AIbZIP). They are type II membrane-associated members of the Basic leucine zipper (bZIP) family of transcription factors, with their N-termini facing the cytoplasm and their C-termini penetrating through the ER membrane. They contain an N-terminal transcriptional activation domain followed bZIP and transmembrane domains, and a C-terminal tail. They play important roles in ER stress and the unfolded protein response (UPR), as well as in many other biological processes such as cell secretion, bone and cartilage formation, and carcinogenesis. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269837 [Multi-domain]  Cd Length: 61  Bit Score: 45.99  E-value: 5.59e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 568950169 226 RLKKKEYVMGLESRVRGLAAENQELRaenrelgKRVQALQEESRYLRAVL 275
Cdd:cd14689   18 RRRKKEYIDGLESRVAACTAENQELK-------KKVEELEKQNRSLLSQL 60
bZIP_ATF2 cd14687
Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar ...
226-277 3.81e-06

Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain; ATF-2 is a sequence-specific DNA-binding protein that belongs to the Basic leucine zipper (bZIP) family of transcription factors. In response to stress, it activates a variety of genes including cyclin A, cyclin D, and c-Jun. ATF-2 also plays a role in the DNA damage response that is independent of its transcriptional activity. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269835 [Multi-domain]  Cd Length: 61  Bit Score: 43.67  E-value: 3.81e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 568950169 226 RLKKKEYVMGLESRVRGLAAENQELRAEnrelgkrVQALQEESRYLRAVLAN 277
Cdd:cd14687   17 RQRKKQWVQQLEEKVRKLESENKALKAE-------VDKLREEVLDLKNLLLA 61
BRLZ smart00338
basic region leucin zipper;
226-269 4.90e-05

basic region leucin zipper;


Pssm-ID: 197664 [Multi-domain]  Cd Length: 65  Bit Score: 40.63  E-value: 4.90e-05
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 568950169   226 RLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESR 269
Cdd:smart00338  21 RERKKAEIEELERKVEQLEAENERLKKEIERLRRELEKLKSELE 64
bZIP cd14686
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and ...
223-262 1.04e-04

Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269834 [Multi-domain]  Cd Length: 52  Bit Score: 39.45  E-value: 1.04e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 568950169 223 RLNRLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQ 262
Cdd:cd14686   13 RRSRERKKERIEELEEEVEELEEENEELKAELEELRAEVE 52
bZIP_CREB1 cd14690
Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) ...
226-257 5.24e-04

Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain; CREB1 is a Basic leucine zipper (bZIP) transcription factor that plays a role in propagating signals initiated by receptor activation through the induction of cAMP-responsive genes. Because it responds to many signal transduction pathways, CREB1 is implicated to function in many processes including learning, memory, circadian rhythm, immune response, and reproduction, among others. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269838 [Multi-domain]  Cd Length: 55  Bit Score: 37.61  E-value: 5.24e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 568950169 226 RLKKKEYVMGLESRVRGLAAENQELRAENREL 257
Cdd:cd14690   17 RRKKKEYVKCLENRVAVLENENKELREELKIL 48
bZIP_1 pfam00170
bZIP transcription factor; The Pfam entry includes the basic region and the leucine zipper ...
226-269 2.47e-03

bZIP transcription factor; The Pfam entry includes the basic region and the leucine zipper region.


Pssm-ID: 395118 [Multi-domain]  Cd Length: 60  Bit Score: 35.82  E-value: 2.47e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 568950169  226 RLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQALQEESR 269
Cdd:pfam00170  17 RQRKQAYIEELERRVKALEGENKTLRSELEELKKEVEKLKSKNK 60
bZIP_XBP1 cd14691
Basic leucine zipper (bZIP) domain of X-box binding protein 1 (XBP1) and similar proteins: a ...
226-264 4.90e-03

Basic leucine zipper (bZIP) domain of X-box binding protein 1 (XBP1) and similar proteins: a DNA-binding and dimerization domain; XBP1, a member of the Basic leucine zipper (bZIP) family, is the key transcription factor that orchestrates the unfolded protein response (UPR). It is the most conserved component of the UPR and is critical for cell fate determination in response to ER stress. The inositol-requiring enzyme 1 (IRE1)-XBP1 pathway is one of the three major sensors at the ER membrane that initiates the UPR upon activation. IRE1, a type I transmembrane protein kinase and endoribonuclease, oligomerizes upon ER stress leading to its increased activity. It splices the XBP1 mRNA, producing a variant that translocates to the nucleus and activates its target genes, which are involved in protein folding, degradation, and trafficking. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.


Pssm-ID: 269839 [Multi-domain]  Cd Length: 58  Bit Score: 34.88  E-value: 4.90e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 568950169 226 RLKKKEYVMGLESRVRGLAAENQELRAENRELGKRVQAL 264
Cdd:cd14691   19 RDRKKARMDELEERVRELEEENQKLRAENESLRARNEDL 57
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
236-283 5.00e-03

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 36.01  E-value: 5.00e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 568950169 236 LESRVRGLAAENQELRAENRELGKRVQALQEESRYLRAVLANETGLAR 283
Cdd:COG2919   34 LRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEERAREELGMVK 81
ZapB pfam06005
Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is ...
236-273 6.58e-03

Cell division protein ZapB; ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation.


Pssm-ID: 428718 [Multi-domain]  Cd Length: 71  Bit Score: 34.93  E-value: 6.58e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 568950169  236 LESRVRGLAAENQELRAENRELGKRVQALQEESRYLRA 273
Cdd:pfam06005   9 LETKIQAAVDTIALLQMENEELKEENEELKEEANELEE 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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