|
Name |
Accession |
Description |
Interval |
E-value |
| Rabaptin |
pfam03528 |
Rabaptin; |
9-495 |
0e+00 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 758.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 9 QPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI 88
Cdd:pfam03528 1 QPDEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 89 KAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEE 168
Cdd:pfam03528 81 KAVATVSENTKQEAIDEVKSQWQEEVASLQAIMKETVREYEVQFHRRLEQERAQWNQYRESAEREIADLRRRLSEGQEEE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 169 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 248
Cdd:pfam03528 161 NLEDEMKKAQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 249 QEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQR 328
Cdd:pfam03528 241 QEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMESVLTSEQLRQVEEIKKKDQEEHKRAR 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 329 INKGKDNKKIDTEEEVKIPVVCALTQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKEGLRRAQST 408
Cdd:pfam03528 321 THKEKETLKSDREHTVSIHAVFSPAGVETSAPLSNVEEQINSAHGSVHSLDTDVVLGAGDSFNKQE-DPFKEGLRRAQST 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 409 DSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTVSLGSLQMPSGFMLTKDQERAIKAMTPEQEETAS 488
Cdd:pfam03528 400 DSLGSSSSLQHKFLGHNQKAKSAGNLDESDFGPLVGADSVSENFDTSSLGSLKMPSGFMLTKDQEKAIKAMTPEQEETAS 479
|
....*..
gi 564372936 489 LLSSVTQ 495
Cdd:pfam03528 480 LLSSVTQ 486
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
518-804 |
8.32e-108 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 333.09 E-value: 8.32e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 518 LQKEVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLM 597
Cdd:pfam09311 21 TRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSETLLDELQQAFSQAKRNFQDQLAVLM 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 598 QSREQVSEELVRLQKDNDSLQGKHSLHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQ 677
Cdd:pfam09311 101 DSREQVSDELVRLQKDNESLQGKHSLHVSLQQAEKFDMPDTVQELQELVLKYREELIEVRTAADHMEEKLKAEILFLKEQ 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 678 IQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKAT 757
Cdd:pfam09311 181 IQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRQLEDLQTTKGSLETQLKKETNEKAA 260
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 564372936 758 VEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 804
Cdd:pfam09311 261 VEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 307
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
13-803 |
2.45e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 2.45e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELylakeEDLKRQNAVLQAAQDdlghlrtqlwEAQAEMENIKAia 92
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKL-----EELRLEVSELEEEIE----------ELQKELYALAN-- 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 93 tvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFH--LRLEQERAQWAQYRESADREIADLRRRLSEGQEE-EN 169
Cdd:TIGR02168 296 ------EISRLEQQKQILRERLANLERQLEELEAQLEELESklDELAEELAELEEKLEELKEELESLEAELEELEAElEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 170 LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQ 249
Cdd:TIGR02168 370 LESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 250 EDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRI 329
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 330 nkgKDNKKIDTEEEVKIPVVC-----ALTQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSksdndmfkEGLRR 404
Cdd:TIGR02168 526 ---SELISVDEGYEAAIEAALggrlqAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGN--------DREIL 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 405 AQSTDSLGTSSSLQSKALGYnykaksagnldESDFGPLVGADSVSENFDT--------------VSLGSLQMPSGFMLTK 470
Cdd:TIGR02168 595 KNIEGFLGVAKDLVKFDPKL-----------RKALSYLLGGVLVVDDLDNalelakklrpgyriVTLDGDLVRPGGVITG 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 471 DQERAIKAMTPEQEETASLLSSVTQgMESAYVSPSGYLLVSETEWNLLQKEVKKLQLMLRQANDQLEKTMKEKQELEDFL 550
Cdd:TIGR02168 664 GSAKTNSSILERRREIEELEEKIEE-LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 551 RQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRdVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhvslqla 630
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-AEAEIEELEAQIEQLKEELKALREALDELRAELTL------- 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 631 edfiLPDTVQVLRELVLKYRENIVHVRTAADHME---EKLKAEILFLKEQIQAEQCLKENLEETLqleiencKEEIASIS 707
Cdd:TIGR02168 815 ----LNEEAANLRERLESLERRIAATERRLEDLEeqiEELSEDIESLAAEIEELEELIEELESEL-------EALLNERA 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 708 SLKAELERIKVEKGQLESTLREKSQQlesLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRL----QTELDVSEQVQ 783
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESK---RSELRRELEELREKLAQLELRLEGLEVRIDNLQERLseeySLTLEEAEALE 960
|
810 820
....*....|....*....|
gi 564372936 784 RDFVKLSQTLQVQLERIRQA 803
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
134-803 |
4.41e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 70.09 E-value: 4.41e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 134 LRLEQERAQWAQYRESADREIadlrrrlsegQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 213
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAE----------EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 214 ASKV-------------KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 280
Cdd:TIGR02168 302 QQKQilrerlanlerqlEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 281 QKAND---QFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCAL----T 353
Cdd:TIGR02168 382 ETLRSkvaQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELerleE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 354 QEESSTPLSNE-EEHLDSTHGSVHSLDADL-----LLPSGDPFSKSDNDMFKEGLRRAQSTDSLGTSSSLQSK------- 420
Cdd:TIGR02168 462 ALEELREELEEaEQALDAAERELAQLQARLdslerLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaaiea 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 421 ALGYNYKA----------KSAGNLDESDFGPLV--GADSVSENFDTVSLG-SLQMPSGFMLTKDqeRAIKAMTPEQEETA 487
Cdd:TIGR02168 542 ALGGRLQAvvvenlnaakKAIAFLKQNELGRVTflPLDSIKGTEIQGNDReILKNIEGFLGVAK--DLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 488 SLLS------SVTQGMESAYVSPSGYLLVSE------TEWNLLQKEVKKLQLML--RQANDQLEKTMKEKQELEDFLRQS 553
Cdd:TIGR02168 620 YLLGgvlvvdDLDNALELAKKLRPGYRIVTLdgdlvrPGGVITGGSAKTNSSILerRREIEELEEKIEELEEKIAELEKA 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 554 AEDSSHQISALVLRAQASEVLLEELQQSFSQAKrdvqEQMAVLMQSREQVSEELVRLQKDNDSLQgkhslhvslqlAEDF 633
Cdd:TIGR02168 700 LAELRKELEELEEELEQLRKELEELSRQISALR----KDLARLEAEVEQLEERIAQLSKELTELE-----------AEIE 764
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 634 ILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAeilfLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAEL 713
Cdd:TIGR02168 765 ELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA----LREALDELRAELTLLNEEAANLRERLESLERRIAATERRL 840
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 714 ERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL 793
Cdd:TIGR02168 841 EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEEL 920
|
730
....*....|
gi 564372936 794 QVQLERIRQA 803
Cdd:TIGR02168 921 REKLAQLELR 930
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
37-805 |
6.60e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.69 E-value: 6.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 37 QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAiATVSENTKQEAIDEVKRQWREEVAS 116
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-ELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 117 LQAVMKETVRDYEHQFH--LRLEQERAQWAQYRESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEK 193
Cdd:TIGR02168 314 LERQLEELEAQLEELESklDELAEELAELEEKLEELKEELESLEAELEELEAElEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 194 EIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH 273
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 274 NQLKHTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRInkgKDNKKIDTEEEVKIPVVC--- 350
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVL---SELISVDEGYEAAIEAALggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 351 --ALTQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSksdndmfkEGLRRAQSTDSLGTSSSLQSKALGYnyka 428
Cdd:TIGR02168 547 lqAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGN--------DREILKNIEGFLGVAKDLVKFDPKL---- 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 429 ksagnldESDFGPLVGADSVSENFDTVSLGSLQMPSGFML-TKDQERAIK--AMTPEQEETASLLSSVTQGMESayvsps 505
Cdd:TIGR02168 615 -------RKALSYLLGGVLVVDDLDNALELAKKLRPGYRIvTLDGDLVRPggVITGGSAKTNSSILERRREIEE------ 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 506 gyllvsetewnlLQKEVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDsshqisalvlraqasevlLEELQQSFSQA 585
Cdd:TIGR02168 682 ------------LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKE------------------LEELSRQISAL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 586 KrdvqEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhvslqlaedfilpdtvqvlrelvlkyrenivhvRTAADHMEE 665
Cdd:TIGR02168 732 R----KDLARLEAEVEQLEERIAQLSKELTELEAE------------------------------------IEELEERLE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 666 KLKAEILFLKEQIqaeqclkENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLE 745
Cdd:TIGR02168 772 EAEEELAEAEAEI-------EELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLE 844
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564372936 746 EQLKKETAAKATVEQLMFEEKNKAQRLQTELDV----SEQVQRDFVKLSQTLQVQLERIRQADS 805
Cdd:TIGR02168 845 EQIEELSEDIESLAAEIEELEELIEELESELEAllneRASLEEALALLRSELEELSEELRELES 908
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
514-817 |
1.21e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 1.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 514 EWNLLQKEVKKLQLMLRQANDQLEKTMKEKQELEDfLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQM 593
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEA-ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 594 AVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQLAEDFIlpDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAEIL 672
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEElEELEEELEEAEEEL--EEAEAELAEAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 673 FLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLKKET 752
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELL 469
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 564372936 753 AAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTK 817
Cdd:COG1196 470 EEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA 534
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-330 |
1.42e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.53 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 14 LQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYL---AKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKA 90
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRqisALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 91 IATVSENTKQEAIDEVKRQwREEVASLQAVMKETVRDYE--HQFHLRLEQERAQWAQYRESADREIADLRRRLsegqeeE 168
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDelRAELTLLNEEAANLRERLESLERRIAATERRL------E 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 169 NLENEMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 248
Cdd:TIGR02168 842 DLEEQIEELSEDIESL-------AAEIEELEELIEELESELEALLNER-ASLEEALALLRSELEELSEELRELESKRSEL 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 249 QEDAEKLRKELHEVCHLLEQERQQHNQLKhtwqkanDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQR 328
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRIDNLQ-------ERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGP 986
|
..
gi 564372936 329 IN 330
Cdd:TIGR02168 987 VN 988
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
13-259 |
1.81e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 1.81e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAia 92
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYEL----LAELARLEQDIARLEERRRELEERLEELEEELAELEE-- 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 93 tvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQwAQYRESADREIADLRRRLSEGQEEENLEN 172
Cdd:COG1196 331 ------ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL-AEAEEELEELAEELLEALRAAAELAAQLE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 173 EMKKAQEDAEKLRSVvmpMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDA 252
Cdd:COG1196 404 ELEEAEEALLERLER---LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
....*..
gi 564372936 253 EKLRKEL 259
Cdd:COG1196 481 ELLEELA 487
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
13-345 |
7.57e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 7.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQ---AAQDDLGHLRTQLWEAQAEMENIK 89
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQeeeKLKERLEELEEDLSSLEQEIENVK 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 90 AiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRL-SEGQEEE 168
Cdd:TIGR02169 758 S--------ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLnRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 169 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQKSVL 248
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA-ALRDLESRLGDLKKERDELE-------AQLREL 901
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 249 QEDAEKLRKElhevchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLrqVEELKKKDQEEDEQQR 328
Cdd:TIGR02169 902 ERKIEELEAQ-------IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV--QAELQRVEEEIRALEP 972
|
330
....*....|....*..
gi 564372936 329 INkgkdNKKIDTEEEVK 345
Cdd:TIGR02169 973 VN----MLAIQEYEEVL 985
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
135-329 |
2.05e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 2.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 135 RLEQERAQWAQYRESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 213
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 214 ASKVKELNHYLEAEKScrtdlemyVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRL 293
Cdd:COG1196 323 EELAELEEELEELEEE--------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190
....*....|....*....|....*....|....*.
gi 564372936 294 LMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRI 329
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEAL 430
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
520-805 |
3.78e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 3.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 520 KEVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRdVQEQMAVLMQS 599
Cdd:TIGR02169 184 ENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-ELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 600 REQVSEELVRLQK----------DNDSLQGK---HSLHVSLQLAEDFI--LPDTVQVLRELVLKYRENIVHVRTAADHME 664
Cdd:TIGR02169 263 LEKRLEEIEQLLEelnkkikdlgEEEQLRVKekiGELEAEIASLERSIaeKERELEDAEERLAKLEAEIDKLLAEIEELE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 665 EKLKAEILfLKEQIQAEQCLKENLEETLQLEIENCKEEIAS----ISSLKAELERIKVEKGQLESTLREKSQQLESLQEI 740
Cdd:TIGR02169 343 REIEEERK-RRDKLTEEYAELKEELEDLRAELEEVDKEFAEtrdeLKDYREKLEKLKREINELKRELDRLQEELQRLSEE 421
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564372936 741 KVNLEEQLK----KETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 805
Cdd:TIGR02169 422 LADLNAAIAgieaKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
13-749 |
5.30e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.45 E-value: 5.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDL-------KRQNAVLQAAQDDLGHLRTQLWEAQAEM 85
Cdd:TIGR02169 252 ELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIgeleaeiASLERSIAEKERELEDAEERLAKLEAEI 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 86 ENIKAIATVSEnTKQEAIDEVKRQWREEVASLQAVMKETVRdyehqfhlRLEQERAQWAQYREsadrEIADLRRRLSEGQ 165
Cdd:TIGR02169 332 DKLLAEIEELE-REIEEERKRRDKLTEEYAELKEELEDLRA--------ELEEVDKEFAETRD----ELKDYREKLEKLK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 166 EEEN-LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQ 244
Cdd:TIGR02169 399 REINeLKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKAL-EIKKQEWKLEQLAADLSKYE-------QE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 245 KSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQrmEIVLTSEQLRQVEELKKKDQEED 324
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSK----LQRELAEAEAQARASEERVRGGRAVEEVLKASIQ--GVHGTVAQLGSVGERYATAIEVA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 325 EQQRINkgkdNKKIDTEEEVKIPVvcALTQEESSTPLSneeehldsthgsvhsldadlLLPsgdpfsksdndmfkegLRR 404
Cdd:TIGR02169 545 AGNRLN----NVVVEDDAVAKEAI--ELLKRRKAGRAT--------------------FLP----------------LNK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 405 AQSTDSLGtSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTvslGSLQMPSGFMLTKDQEraikamtpeqe 484
Cdd:TIGR02169 583 MRDERRDL-SILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEA---ARRLMGKYRMVTLEGE----------- 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 485 etaslLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVKKLQLMLRQANDQLEKTMKEKQELeDFLRQSAEDSSHQISAL 564
Cdd:TIGR02169 648 -----LFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRL-DELSQELSDASRKIGEI 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 565 VLRAQasevLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQLAEDFILPDTVQVLR 643
Cdd:TIGR02169 722 EKEIE----QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDlHKLEEALNDLEARLSHSRIPEIQ 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 644 ELVLKYRENIVHVRTAADHMEEKLKA-----------------EILFLKEQIQAEQCLKENLE---ETLQLEIENCKEEI 703
Cdd:TIGR02169 798 AELSKLEEEVSRIEARLREIEQKLNRltlekeylekeiqelqeQRIDLKEQIKSIEKEIENLNgkkEELEEELEELEAAL 877
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 564372936 704 -----------ASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLEEQLK 749
Cdd:TIGR02169 878 rdlesrlgdlkKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELS 934
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-266 |
5.36e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.32 E-value: 5.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 14 LQQRVAELEKInaefLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT 93
Cdd:COG1196 293 LLAELARLEQD----IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 94 VSENTKQEAIDEVKRQWREEVASLQAvmketvrdyEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENE 173
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRA---------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 174 MKKAQEDAEKLRSVVmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAE 253
Cdd:COG1196 440 EEEALEEAAEEEAEL---EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
250
....*....|...
gi 564372936 254 KLRKELHEVCHLL 266
Cdd:COG1196 517 AGLRGLAGAVAVL 529
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
59-780 |
8.07e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.75 E-value: 8.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 59 RQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEhqfhlrl 136
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAE------- 1131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 137 EQERAQWAQYRESAdREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAalkDKLTEAEDKIKELEASK 216
Cdd:PTZ00121 1132 EARKAEDARKAEEA-RKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKA---EELRKAEDARKAEAARK 1207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 217 VKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMR 296
Cdd:PTZ00121 1208 AEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAE 1287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 297 DMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTE------EEVKIPVVCALTQEESST---PLSNEEEH 367
Cdd:PTZ00121 1288 EKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaakkkaEEAKKAAEAAKAEAEAAAdeaEAAEEKAE 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 368 LDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKEGLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDEsdfgplvgads 447
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE----------- 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 448 vsenfdtvslgslqmpsgfmLTKDQERAIKAmtPEQEETASLLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVKKLQL 527
Cdd:PTZ00121 1436 --------------------AKKKAEEAKKA--DEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE 1493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 528 MLRQANDQLEKTMKEKQELEDfLRQSAEdsshqisalvlRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQV--SE 605
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADE-AKKAEE-----------AKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELkkAE 1561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 606 ELVRLQKDNDSLQGKhslHVSLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAeilflkEQIQAEQCLK 685
Cdd:PTZ00121 1562 EKKKAEEAKKAEEDK---NMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA------EELKKAEEEK 1632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 686 ENLEETLQLEiencKEEIASISSLKAELERIKVEKGQLESTLRE---KSQQLESLQEIKVNLEEQLKKETAAKATVEQL- 761
Cdd:PTZ00121 1633 KKVEQLKKKE----AEEKKKAEELKKAEEENKIKAAEEAKKAEEdkkKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELk 1708
|
730 740
....*....|....*....|.
gi 564372936 762 --MFEEKNKAQRLQTELDVSE 780
Cdd:PTZ00121 1709 kkEAEEKKKAEELKKAEEENK 1729
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-312 |
8.56e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 8.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 14 LQQRVAELEKINAEFLRAQQQLEQ----EFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIK 89
Cdd:COG1196 222 LKELEAELLLLKLRELEAELEELEaeleELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 90 AIATVSENTKQEA---IDEVKRQWREEVASLQAVmKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQE 166
Cdd:COG1196 302 QDIARLEERRRELeerLEELEEELAELEEELEEL-EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 167 EENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKS 246
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564372936 247 VLQEDAEKLRKElhevchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQ 312
Cdd:COG1196 461 LLELLAELLEEA--------ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
48-343 |
1.63e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 48 ELYLAKEEDLKRQNAVLQAAQDDlgHLRTQLWEAQAEMENIKAiatvsentKQEAIDEVKRQWREEVASLQAVMKEtvrd 127
Cdd:COG1196 213 ERYRELKEELKELEAELLLLKLR--ELEAELEELEAELEELEA--------ELEELEAELAELEAELEELRLELEE---- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 128 yehqfhLRLEQERAQwAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAED 207
Cdd:COG1196 279 ------LELELEEAQ-AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL-------EEELEELEEELEELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 208 KIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQlkhtwQKANDQF 287
Cdd:COG1196 345 ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL-----LERLERL 419
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 564372936 288 LESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEE 343
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
16-345 |
2.80e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 16 QRVAELEKINAEFLRAQQQLE-QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLghlRTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1335 KKKAEEAKKAAEAAKAEAEAAaDEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK---KADEAKKKAEEDKKKADELK 1411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 95 SENTKQEAIDEVKRQWREEVASLQAVMK-ETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENE 173
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEKKKADEAKKKaEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 174 MKKAQEDAEKLRSvvmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScrtdlemyvavLNTQKSVLQEDAE 253
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA-----------EEKKKADELKKAE 1555
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 254 KLRKElhEVCHLLEQERQQHNQLKHTWQKAND--QFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINK 331
Cdd:PTZ00121 1556 ELKKA--EEKKKAEEAKKAEEDKNMALRKAEEakKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKK 1633
|
330
....*....|....
gi 564372936 332 GKDNKKIDTEEEVK 345
Cdd:PTZ00121 1634 KVEQLKKKEAEEKK 1647
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-345 |
4.10e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 4.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRaKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAtv 94
Cdd:PTZ00121 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAK-KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKA-- 1492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 95 sENTKQEAiDEVKRQWREEVASLQAVMKETVRDYEHqfhLRLEQERAQWAQYRESADREIADLRRRLSEGQ--EEENLEN 172
Cdd:PTZ00121 1493 -EEAKKKA-DEAKKAAEAKKKADEAKKAEEAKKADE---AKKAEEAKKADEAKKAEEKKKADELKKAEELKkaEEKKKAE 1567
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 173 EMKKAQED---AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScRTDLEMYVAVLNTQKSVLQ 249
Cdd:PTZ00121 1568 EAKKAEEDknmALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK-AEEEKKKVEQLKKKEAEEK 1646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 250 EDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEE---DEQ 326
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEElkkAEE 1726
|
330
....*....|....*....
gi 564372936 327 QRINKGKDNKKIDTEEEVK 345
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKK 1745
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
13-214 |
4.95e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 4.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLE---------QEFNQKRAKFKEL-YLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQ 82
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIEllepirelaERYAAARERLAELeYLRAALRLWFAQRRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 83 AEMENIKAiatvSENTKQEAIDEVKRQWRE----EVASLQAVMKetvrdyehqfhlRLEQERAQWAQYRESADREIADLr 158
Cdd:COG4913 309 AELERLEA----RLDALREELDELEAQIRGnggdRLEQLEREIE------------RLERELEERERRRARLEALLAAL- 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 564372936 159 rRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 214
Cdd:COG4913 372 -GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
20-788 |
5.60e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.89 E-value: 5.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 20 ELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTK 99
Cdd:pfam02463 184 NLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 100 QEAIDEVKRQWREEvaslQAVMKETVRDYEHQFHLRLEQERAQwaqyresadreIADLRRRLSEGQEEENLENEMKKAQE 179
Cdd:pfam02463 264 EEKLAQVLKENKEE----EKEKKLQEEELKLLAKEEEELKSEL-----------LKLERRKVDDEEKLKESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 180 DAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYV-------------------AV 240
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSsaaklkeeelelkseeekeAQ 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 241 LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKD 320
Cdd:pfam02463 409 LLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLEL 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 321 QEEDEQQRINKGKDNKKIDTEEEVKIPVVCALTQEESSTPLSNEEEHLDSTHGSVHSLDADlllPSGDPFSKSDNDMFKE 400
Cdd:pfam02463 489 LLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAV---IVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 401 GLRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTVSLGSLQMPSGFMLTKDQERAIKAMT 480
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 481 PEQEETASLLSSvtqGMESAYVSPSGYLLVSETEWNLLQKEVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQ 560
Cdd:pfam02463 646 SGLRKGVSLEEG---LAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEEL 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 561 ISALVLRAQA-SEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQLAEDfilpdtv 639
Cdd:pfam02463 723 LADRVQEAQDkINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEK------- 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 640 qvLRELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVE 719
Cdd:pfam02463 796 --LKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELL 873
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564372936 720 KGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVK 788
Cdd:pfam02463 874 LKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
22-335 |
7.11e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 7.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 22 EKINAEFLRAQQQLEQEFNQKRAKfkelYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQE 101
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 102 AIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQEDA 181
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 182 EKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMyvavlntqksvlQEDAEKLRKElhe 261
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED------------KKKAEEAKKD--- 1752
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564372936 262 vchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrmEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDN 335
Cdd:PTZ00121 1753 -----EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE----ELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEG 1817
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
529-757 |
7.40e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 7.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 529 LRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELV 608
Cdd:COG4942 32 LQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLR 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 609 RLQKdndslQGKHSLHVSLQLAEDFilpdtVQVLRELVLkYRENIVHVRTAADHMEEKLkAEILFLKEQIQAEQCLKENL 688
Cdd:COG4942 112 ALYR-----LGRQPPLALLLSPEDF-----LDAVRRLQY-LKYLAPARREQAEELRADL-AELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 564372936 689 EETLQLEIENCKEEIASISSLKAELERikvEKGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKAT 757
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEK---ELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
77-382 |
7.65e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 7.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 77 QLWEAQAEMENIKAIATVSEN---TKQEAIDEVKRQWREEVASLQAVMKETVRDYEhqfhlRLEQERAQWAQYRESADRE 153
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAelrKELEELEEELEQLRKELEELSRQISALRKDLA-----RLEAEVEQLEERIAQLSKE 755
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 154 IADLRRRLSEGQEEENLENEMKKAQED-AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRT 232
Cdd:TIGR02168 756 LTELEAEIEELEERLEEAEEELAEAEAeIEELEAQIEQLKEELKALREALDELRAELTLLNE-EAANLRERLESLERRIA 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 233 DLEMYVAVLNTQKSVLQEDAEKLRKE---LHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEivltsEQ 309
Cdd:TIGR02168 835 ATERRLEDLEEQIEELSEDIESLAAEieeLEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE-----SK 909
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564372936 310 LRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEvKIPVVCALTQEESSTPLSNEEEHLDSTHGSVHSLDADL 382
Cdd:TIGR02168 910 RSELRRELEELREKLAQLELRLEGLEVRIDNLQE-RLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-366 |
1.21e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRaKFKELYLAKEEDLKRQNAVLQAAQDdlghlRTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEA-----KKKADEAKKAEEAKKADEAK 1528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 95 SENTKQEAiDEVKRQwrEEVASLQAVMKETvrdyehqfHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEM 174
Cdd:PTZ00121 1529 KAEEAKKA-DEAKKA--EEKKKADELKKAE--------ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 175 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVavlntQKSVLQEDAEK 254
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI-----KAAEEAKKAEE 1672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 255 LRKELHEVCHLLEQERQQHNQLKHTWQkandqflESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKD 334
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAE-------EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
330 340 350
....*....|....*....|....*....|..
gi 564372936 335 NKKIDTEEEVKIPVVCALTQEESSTPLSNEEE 366
Cdd:PTZ00121 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
168-453 |
3.70e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 44.27 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 168 ENLENEMKKAQEDAEKLRSvvmpmeKEIAAL-KDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDlemyvaVLNTQKS 246
Cdd:PTZ00108 1105 EKLNAELEKKEKELEKLKN------TTPKDMwLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGK------ASKLRKP 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 247 VLQEDAEKLR-KELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDE 325
Cdd:PTZ00108 1173 KLKKKEKKKKkSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 326 QQRINKGKDNKKIDTEEEVKIPV----VCALTQEESSTPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSdNDMFKEG 401
Cdd:PTZ00108 1253 SSEDNDEFSSDDLSKEGKPKNAPkrvsAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKK-KKSEKKT 1331
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 564372936 402 LRRAQSTDSLGTSSSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFD 453
Cdd:PTZ00108 1332 ARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDED 1383
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
13-225 |
6.39e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 6.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEqefnQKRAKFKELYLAKEEdLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIA 92
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLE----ELEAELEELEEELDE-LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 93 TVSENTK---QEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLR--RRLSEGQEE 167
Cdd:COG4913 747 LRALLEErfaAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPeyLALLDRLEE 826
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564372936 168 ENL---ENEMKKAQEDAeklrsvvmpMEKEIAALKDKLTEAEDKIKEleasKVKELNHYLE 225
Cdd:COG4913 827 DGLpeyEERFKELLNEN---------SIEFVADLLSKLRRAIREIKE----RIDPLNDSLK 874
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
75-223 |
8.05e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.84 E-value: 8.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 75 RTQLWEAQAEMENIKAIATVS-ENTKQEAIDEVKRQWreevaslqavmketvrdyehqFHLRLEQERaqwaQYREsADRE 153
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI---------------------HKLRNEFEK----ELRE-RRNE 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 154 IADLRRRLSegQEEENLENEMkkaqEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHY 223
Cdd:PRK12704 84 LQKLEKRLL--QKEENLDRKL----ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-344 |
8.14e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDlKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1632 KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEED-KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKK 1710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 95 SENTKQEAiDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEM 174
Cdd:PTZ00121 1711 EAEEKKKA-EELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED 1789
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 175 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKElnhyleaekscrtdlemyvaVLNTQKSVLQEDAEk 254
Cdd:PTZ00121 1790 EKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKE--------------------VADSKNMQLEEADA- 1848
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 255 lrkelhevchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEivltseQLRQVEELKKKDQEEDEQQRINKGKD 334
Cdd:PTZ00121 1849 -----------FEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIE------EADEIEKIDKDDIEREIPNNNMAGKN 1911
|
330
....*....|
gi 564372936 335 NKKIDTEEEV 344
Cdd:PTZ00121 1912 NDIIDDKLDK 1921
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
657-824 |
8.83e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 8.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 657 RTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLES 736
Cdd:COG1196 255 LEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEE 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 737 LQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVK----LSQTLQVQLERIRQADSLERIRAI 812
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEelleALRAAAELAAQLEELEEAEEALLE 414
|
170
....*....|..
gi 564372936 813 LNDTKLTDINQL 824
Cdd:COG1196 415 RLERLEEELEEL 426
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
644-823 |
8.83e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 8.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 644 ELVLKYRENIVHVRTAADHMEEKLKAEIlflkEQIQAEQCLKENLEETLQLEIENCKEEI----ASISSLKAELERIKVE 719
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAEL----EELEAELAELEAELEELRLELEELELELeeaqAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 720 KGQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLER 799
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180
....*....|....*....|....
gi 564372936 800 IRQADSLERIRAILNDTKLTDINQ 823
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEE 407
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
151-280 |
9.58e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.92 E-value: 9.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 151 DREIADLRRRLSEGQEEENLENEMKKAQEDAE--KLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNhyLEAEK 228
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEirRLEEQVERLEAEVEELEAELEEKDERIERLER-ELSEAR--SEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 564372936 229 SCRTDLEMyvavlntqkSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 280
Cdd:COG2433 460 EIRKDREI---------SRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
19-117 |
1.03e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 42.46 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 19 AELEkINAEFLRAQQQLEQEFNQKRAKF---------KELYLAKE-EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI 88
Cdd:PRK12704 58 ALLE-AKEEIHKLRNEFEKELRERRNELqklekrllqKEENLDRKlELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
|
90 100 110
....*....|....*....|....*....|....*...
gi 564372936 89 KA--------IATVS-ENTKQEAIDEVKRQWREEVASL 117
Cdd:PRK12704 137 IEeqlqelerISGLTaEEAKEILLEKVEEEARHEAAVL 174
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
86-227 |
1.03e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 86 ENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQERAQWAQYRESADREIADLRRRLSEGQ 165
Cdd:COG2433 376 LSIEEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVE-RLEAEVEELEAELEEKDERIERLERELSEAR 454
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 564372936 166 EEENLEnemkkAQEDAEklrsvVMPMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAE 227
Cdd:COG2433 455 SEERRE-----IRKDRE-----ISRLDREIERLERELEEERERIEELK-RKLERLKELWKLE 505
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
138-331 |
1.15e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 138 QERAQWAQYRESADREIADLRRRLSEGQ-EEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASK 216
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 217 VKELNHYLE----AEKSCR-------------TDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHT 279
Cdd:COG4942 100 EAQKEELAEllraLYRLGRqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE----LAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 564372936 280 WQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRINK 331
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
668-800 |
1.27e-03 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 42.35 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 668 KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIA-------SISSLKAELERIKVEKGQLEStlreksqQLESLQEI 740
Cdd:pfam05911 680 TEENKRLKEEFEQLKSEKENLEVELASCTENLESTKSqlqeseqLIAELRSELASLKESNSLAET-------QLKCMAES 752
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 741 KVNLEEQLkkeTAAKATVEQLmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERI 800
Cdd:pfam05911 753 YEDLETRL---TELEAELNEL----RQKFEALEVELEEEKNCHEELEAKCLELQEQLERN 805
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
4-214 |
1.50e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 4 PGPAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAkEEDLKRQNAVLQAAQDDLGHLRTQLWEAQA 83
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAAL-ERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 84 EmenIKAIATVSENTKQEAIDEVKRQWR----------------EEVASLQAVMKETVRDYEHQFHlRLEQERAQWAQYR 147
Cdd:COG4942 91 E---IAELRAELEAQKEELAELLRALYRlgrqpplalllspedfLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 564372936 148 ESADREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 214
Cdd:COG4942 167 AELEAERAELEALLAELEEErAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
13-299 |
1.56e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.41 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAvLQAAQDDLghlrtqlweaqaEMENIKAIA 92
Cdd:pfam15921 573 NMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRE-LEARVSDL------------ELEKVKLVN 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 93 TVSENTKQ-EAIDEVKRQWREEVASLQAVMKETVRDYEhqfhlrleQERAQWAQYRESADREIADLRRRLSEGQEE-ENL 170
Cdd:pfam15921 640 AGSERLRAvKDIKQERDQLLNEVKTSRNELNSLSEDYE--------VLKRNFRNKSEEMETTTNKLKMQLKSAQSElEQT 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 171 ENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKScrtDLEMYVAVLNTQKSVL 248
Cdd:pfam15921 712 RNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEamTNANKEKHFLKEEKN---KLSQELSTVATEKNKM 788
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 564372936 249 QEDAEKLRKELHEVchlleqeRQQHNQLKHTWQKANDQFLESQRLLMRDMQ 299
Cdd:pfam15921 789 AGELEVLRSQERRL-------KEKVANMEVALDKASLQFAECQDIIQRQEQ 832
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
87-275 |
1.60e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 87 NIKAIATVSEntKQEAIDEVKRQWREEVASLQAVMKETVRdyehQFHLRLEQERAQWAQYR-ESADREIADL---RRRLS 162
Cdd:COG4913 608 NRAKLAALEA--ELAELEEELAEAEERLEALEAELDALQE----RREALQRLAEYSWDEIDvASAEREIAELeaeLERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 163 EGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELNHYLEAEKSCRTDLEM 236
Cdd:COG4913 682 ASSDDlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaAEDLARLELRALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|....*....
gi 564372936 237 yvAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQ 275
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
563-811 |
1.61e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 563 ALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhvslqlaedfiLPDTVQVL 642
Cdd:COG4942 6 LLALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA-----------LARRIRAL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 643 RELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQ 722
Cdd:COG4942 75 EQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 723 LESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQ 802
Cdd:COG4942 155 LRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*....
gi 564372936 803 ADSLERIRA 811
Cdd:COG4942 235 EAAAAAERT 243
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
658-823 |
1.64e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 658 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 737
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 738 QEIKVNLEEQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTK 817
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEAR 408
|
....*.
gi 564372936 818 LTDINQ 823
Cdd:TIGR02168 409 LERLED 414
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
15-160 |
1.85e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKElylAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT- 93
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDA---LREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRAr 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564372936 94 ---------VSENTKQEAIDEVKRQWREEVASLQAvMKETVRDYEHQFHLRLEQERAQwaqyRESADREIADLRRR 160
Cdd:COG4913 364 leallaalgLPLPASAEEFAALRAEAAALLEALEE-ELEALEEALAEAEAALRDLRRE----LRELEAEIASLERR 434
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
13-164 |
2.05e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 13 SLQQRVAELEKINAEFLRAQQQLEqEFNQKRAK-------FKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEM 85
Cdd:COG3096 516 QLRAQLAELEQRLRQQQNAERLLE-EFCQRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARI 594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 86 ENIKAIATVSEnTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEHQfhlrLEQERAQWAQYRESADREIadlrRRLSE 163
Cdd:COG3096 595 KELAARAPAWL-AAQDALERLREQSGEALADSQEVTAamQQLLERERE----ATVERDELAARKQALESQI----ERLSQ 665
|
.
gi 564372936 164 G 164
Cdd:COG3096 666 P 666
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
535-811 |
2.35e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 535 QLEKTMKEKQELEDFLRQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDN 614
Cdd:COG1196 201 QLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 615 DSLQgkhslhvSLQLAEdfilpdtvQVLRELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEE---- 690
Cdd:COG1196 281 LELE-------EAQAEE--------YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEleee 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 691 --TLQLEIENCKEEIASISSLKAELERIKVEkgQLESTLREKSQQLESLQEIKVNLEEQLKKETAAKATVEQLMFEEKNK 768
Cdd:COG1196 346 leEAEEELEEAEAELAEAEEALLEAEAELAE--AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 564372936 769 AQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRA 811
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLA 466
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
26-219 |
2.35e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 2.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 26 AEFLRA--QQQLEQEFNQ---KRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENtKQ 100
Cdd:COG4717 40 LAFIRAmlLERLEKEADElfkPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE-EL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 101 EAIDEVKRQWR--EEVASLQAVMKETVRDYEHqfHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENL--ENEMKK 176
Cdd:COG4717 119 EKLEKLLQLLPlyQELEALEAELAELPERLEE--LEERLEELRELEEELEELEAELAELQEELEELLEQLSLatEEELQD 196
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 564372936 177 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKE 219
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
519-739 |
2.67e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.43 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 519 QKEVKKLQLMLRQANDQLEKTMKEKQELEDFL--------RQSAEDSSHQISALVLRAQASEVLLEELQQSFSQAK---- 586
Cdd:PLN02939 48 KKRGKNIAPKQRSSNSKLQSNTDENGQLENTSlrtvmelpQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEqlsd 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 587 ----------RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhVSLQLAEDFILPDT-------VQVLRELVLKY 649
Cdd:PLN02939 128 fqledlvgmiQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINI-LEMRLSETDARIKLaaqekihVEILEEQLEKL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 650 RENIVHVRTAADHMEEKLKAEILFLKEqiqaeqclkENLeeTLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLRE 729
Cdd:PLN02939 207 RNELLIRGATEGLCVHSLSKELDVLKE---------ENM--LLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRE 275
|
250
....*....|
gi 564372936 730 KSQQLESLQE 739
Cdd:PLN02939 276 LESKFIVAQE 285
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
80-277 |
2.69e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 80 EAQAEMENIKAIATVSENTKQ-----EAIDEVKRQWREEVASLQAV--MKETVRDYEHQFHLRL-EQERAQWAQYRESAD 151
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREqiellEPIRELAERYAAARERLAELeyLRAALRLWFAQRRLELlEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 152 REIADLRRRLSEGQEE-ENLENEMKKAQEDAEKlrsvvmPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEksc 230
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEA-LLAALGLPLPAS--- 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 564372936 231 RTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLK 277
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE 425
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
151-272 |
2.76e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 151 DREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKE---LN 221
Cdd:COG1579 16 DSELDRLEHRLKELPAElAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlgnVRNNKEyeaLQ 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 564372936 222 HYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQ 272
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
12-326 |
2.80e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 12 VSLQQRVAELEKINAEFLRAQQQLEQEFN----------------QKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLR 75
Cdd:COG3096 302 AEEQYRLVEMARELEELSARESDLEQDYQaasdhlnlvqtalrqqEKIERYQEDLEELTERLEEQEEVVEEAAEQLAEAE 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 76 TQLWEAQAEMENIKA-IATVsentkQEAIDEVKR---QWREEVASLQAVMKETVRD--YEHQFHLRLEQERAQwaqyRES 149
Cdd:COG3096 382 ARLEAAEEEVDSLKSqLADY-----QQALDVQQTraiQYQQAVQALEKARALCGLPdlTPENAEDYLAAFRAK----EQQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 150 ADREIADLRRRLS-----EGQEEENLE------------NEMKKAQEDAEKLRSVVMPMEKEiAALKDKLTEAEDKIKEL 212
Cdd:COG3096 453 ATEEVLELEQKLSvadaaRRQFEKAYElvckiageversQAWQTARELLRRYRSQQALAQRL-QQLRAQLAELEQRLRQQ 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 213 EASK--VKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHT---WQKAND-- 285
Cdd:COG3096 532 QNAErlLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARapaWLAAQDal 611
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 564372936 286 --------QFLESQRLLMRDMQRmeivlTSEQLRQVEELKKKDQEEDEQ 326
Cdd:COG3096 612 erlreqsgEALADSQEVTAAMQQ-----LLEREREATVERDELAARKQA 655
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
158-345 |
6.06e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 158 RRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteAEDKIKELEASKVKELNHYLEAEKSCRTDLEM- 236
Cdd:pfam17380 298 QERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERM--AMERERELERIRQEERKRELERIRQEEIAMEIs 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 237 YVAVLNTQKSVLQEDAEKLRKELHEV--CHLLEQERQQHNQLKHT------WQKANDQFLESQRLLMRDMQRMEIVLTSE 308
Cdd:pfam17380 376 RMRELERLQMERQQKNERVRQELEAArkVKILEEERQRKIQQQKVemeqirAEQEEARQREVRRLEEERAREMERVRLEE 455
|
170 180 190
....*....|....*....|....*....|....*...
gi 564372936 309 QLRQVE-ELKKKDQEEDEQQRINKGKDNKKIDTEEEVK 345
Cdd:pfam17380 456 QERQQQvERLRQQEEERKRKKLELEKEKRDRKRAEEQR 493
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
664-817 |
7.61e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 39.89 E-value: 7.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 664 EEKLKAEILFLKEQIQAEQ---CLKENLEETLQLeienckeeIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEI 740
Cdd:PRK11281 38 EADVQAQLDALNKQKLLEAedkLVQQDLEQTLAL--------LDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDD 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564372936 741 KVnleeQLKKETAAKATVEQLMfeeknkaQRLQTELDVSEQVQRDFVKL-SQ--TLQVQLERIRQADS-----LERIRAI 812
Cdd:PRK11281 110 ND----EETRETLSTLSLRQLE-------SRLAQTLDQLQNAQNDLAEYnSQlvSLQTQPERAQAALYansqrLQQIRNL 178
|
....*
gi 564372936 813 LNDTK 817
Cdd:PRK11281 179 LKGGK 183
|
|
| |
