|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
38-212 |
1.75e-44 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 160.21 E-value: 1.75e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 38 WRKLKNSQEAQKRQATLVRKLQAKVLQYRSWCQDLEKRLEA---------------TGGLIPQRWESVEEPNLEQLLIRL 102
Cdd:pfam15035 1 RRKLQAYQEAQQRQAQLVQKLQAKVLQYKKRCSELEQQLLEktselektelllrklTLEPRLQRLEREHSADLEEALIRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 103 EEEQQRCESLVEVNTELRLHMEKADVVNKALQEDVEKLTVDWSRARDELVRKESQWRMEQEFFKGYLRGEHGRLLNLWRE 182
Cdd:pfam15035 81 EEERQRSESLSQVNSLLREQLEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWRE 160
|
170 180 190
....*....|....*....|....*....|
gi 189458802 183 VVTFRRHFLKMKSATDRDLTELKAEHARLS 212
Cdd:pfam15035 161 VVAVRRQFTELKTATERDLSELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
455-1032 |
3.56e-24 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 111.57 E-value: 3.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 455 LQGEVDSLSRERELLQKARgELQQQLEVLEQEAWRLRRmnmelqlqgDSAQGEKLEQQEELHLAVRERERLQETLVGLEA 534
Cdd:COG1196 198 LERQLEPLERQAEKAERYR-ELKEELKELEAELLLLKL---------RELEAELEELEAELEELEAELEELEAELAELEA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 535 kqseslsELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKV 614
Cdd:COG1196 268 -------ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 615 ELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELK 694
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 695 DKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNl 774
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA- 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 775 fEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQ----EWDAVARQLAQAEQEGQAS------ 844
Cdd:COG1196 500 -EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQnivvEDDEVAAAAIEYLKAAKAGratflp 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 845 LERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIR-----AQREEERSQADSALYQ 919
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRravtlAGRLREVTLEGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 920 MQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAfQKDK 999
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE-REEL 737
|
570 580 590
....*....|....*....|....*....|...
gi 189458802 1000 LDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVK 1032
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1780-2297 |
6.84e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 107.33 E-value: 6.84e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1780 QEAKEQGELREQVLQG-QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHRE 1858
Cdd:COG1196 216 RELKEELKELEAELLLlKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1859 QVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALR 1938
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1939 AENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRiREGEI 2018
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE-EEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2019 QAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAqreeeilmL 2098
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA--------V 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2099 REASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERE 2178
Cdd:COG1196 527 AVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2179 SEQQRLQEELVLSRQALEEQQ-SGGPHSTSRADQGPKVGQGSQSGEVETEPSPGVEEKERLTQRLERLQQAVAELEVDRS 2257
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 189458802 2258 KLQCHNAQLRTALEQVERERRKLKRDSVRASRAGSLEARE 2297
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEAL 726
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1570-2101 |
5.96e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 104.25 E-value: 5.96e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1570 ELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1649
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1650 QELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKE 1729
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1730 VEcQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgELREQVLQGQLEEAQRDLAQRDH 1809
Cdd:COG1196 396 AE-LAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE-EAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1810 ELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGeLEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESR 1889
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL-LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1890 EHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAAL 1969
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1970 QEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEK 2049
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEA 712
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 189458802 2050 AGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREA 2101
Cdd:COG1196 713 EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1726-2283 |
8.16e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 103.86 E-value: 8.16e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1726 KEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA 1805
Cdd:COG1196 223 KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1806 QRDHELETLRQEKQQTQDQEESMKlktsALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLR 1885
Cdd:COG1196 303 DIARLEERRRELEERLEELEEELA----ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1886 AESREHEKAVLALQQRCAEQAQEHEAEARTLQDswlqAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKA 1965
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1966 QAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQ----QELCQKKE 2041
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLagavAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2042 ELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLT-VAQREEEILMLREASSPRHRALPAEKPALQPLP 2120
Cdd:COG1196 535 AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDkIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2121 AQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQS 2200
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2201 GGPHSTSRADQGPKVGQGSQSGEVETEPSpgVEEKERLTQRLERLQQAVAELEVDRSKLQCHNAQLRTALEQVERERRKL 2280
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEE--EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERL 772
|
...
gi 189458802 2281 KRD 2283
Cdd:COG1196 773 ERE 775
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1673-2253 |
2.27e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 99.24 E-value: 2.27e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1673 LEEDLEQIKHSLRERS-QELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQL 1751
Cdd:COG1196 218 LKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1752 QGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQvlqgQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLK 1831
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE----ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1832 TSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEA 1911
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1912 EARTLQdswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQE-KEQSLLEQAELSHTLEAST 1990
Cdd:COG1196 454 LEEEEE----ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVL 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1991 AALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHL--QQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQ 2068
Cdd:COG1196 530 IGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAgrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2069 ERQEETRRLLESLKELQLTVAQREEEILMLREASSpRHRALPAEKPALQPLPA---QQELERLQTALRQTEAREIEWREK 2145
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAG-RLREVTLEGEGGSAGGSltgGSRRELLAALLEAEAELEELAERL 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2146 AQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQsggphstsradqgpkvGQGSQSGEVE 2225
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELL----------------EEEELLEEEA 752
|
570 580
....*....|....*....|....*...
gi 189458802 2226 TEPSPGVEEKERLTQRLERLQQAVAELE 2253
Cdd:COG1196 753 LEELPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1247-2049 |
6.70e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.82 E-value: 6.70e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1247 ARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAEL 1326
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1327 QKMEAQNDRELLQASKEKLSAQVEHLQAcvaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVA 1406
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEE----------KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRS 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1407 QGKALQENLALLAQTLSNREREVETLQAEVQELekQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPM 1486
Cdd:TIGR02168 387 KVAQLELQIASLNNEIERLEARLERLEDRRERL--QQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1487 AVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLE----------QKAQVIESQRGQIQDL---KKQLGTLECLALE 1553
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegvkallKNQSGLSGILGVLSELisvDEGYEAAIEAALG 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1554 LEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEeRSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDE 1633
Cdd:TIGR02168 545 GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSI-KGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLG 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1634 LQKQQEQLAQALERKGQELvlQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspskgqr 1713
Cdd:TIGR02168 624 GVLVVDDLDNALELAKKLR--PGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEK--------- 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1714 gslehlkliLRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHL-QEAKEQGELREQ- 1791
Cdd:TIGR02168 693 ---------IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIaQLSKELTELEAEi 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1792 -VLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVE 1870
Cdd:TIGR02168 764 eELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1871 GRQVRALEEVLGDLRAESREHEKAVLALQqrcaEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEA 1950
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELE----SELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEE 919
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1951 AVSQAEALQEALSKAQAALQEKEQSLLEQAELS-HTLEASTAALQATLDTCQASARQLEEALrIREGEIQAQALQHHEVT 2029
Cdd:TIGR02168 920 LREKLAQLELRLEGLEVRIDNLQERLSEEYSLTlEEAEALENKIEDDEEEARRRLKRLENKI-KELGPVNLAAIEEYEEL 998
|
810 820
....*....|....*....|
gi 189458802 2030 QHLQQELCQKKEELRQLLEK 2049
Cdd:TIGR02168 999 KERYDFLTAQKEDLTEAKET 1018
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
420-952 |
7.13e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 97.31 E-value: 7.13e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 420 LQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQL 499
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEE 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 500 QGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIV 579
Cdd:COG1196 324 ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 580 ELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALW 659
Cdd:COG1196 404 ELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 660 EKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRER 739
Cdd:COG1196 484 EELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAI 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 740 AALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAE 819
Cdd:COG1196 564 EYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLA 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 820 RTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEM 899
Cdd:COG1196 644 GRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEE 723
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 900 EAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRT---QKELADASQQLERL 952
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLeelERELERLEREIEAL 779
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
844-1526 |
1.13e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.05 E-value: 1.13e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 844 SLERQKVAHEEEVNRLQEKWEKERSwLQQELDKTLETLERERAELETKLREQQTEMEAIRA------QREEERSQADSAL 917
Cdd:TIGR02168 236 ELREELEELQEELKEAEEELEELTA-ELQELEEKLEELRLEVSELEEEIEELQKELYALANeisrleQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 918 YQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQK 997
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE-AELEELEAELEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 998 DKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQ-----ECSRIQKELEKENASLALSLVEKEKRLLILQEADSVR 1072
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEeaelkELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1073 QQELSSLRQDIQEAQEGQRELGVQVELLRQE---------VKEKEADFVAREAQLLE-ELEASRVAEQQLRASL------ 1136
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFsegvkallkNQSGLSGILGVLSELISvDEGYEAAIEAALGGRLqavvve 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1137 -------------WAQEAKATQLQL--------------QLRSTESQLEALVAEQQPENQAQAQLASLCS--VLQQALGS 1187
Cdd:TIGR02168 554 nlnaakkaiaflkQNELGRVTFLPLdsikgteiqgndreILKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvLVVDDLDN 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1188 ACESRPELRGGGdsapTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTD 1267
Cdd:TIGR02168 634 ALELAKKLRPGY----RIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEE 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1268 TEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSA 1347
Cdd:TIGR02168 710 LEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEA 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1348 QVEHLQACVAEAQAQADAaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNRER 1427
Cdd:TIGR02168 790 QIEQLKEELKALREALDE---LRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEE 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1428 EVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRE--- 1504
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQErls 946
|
730 740 750
....*....|....*....|....*....|....
gi 189458802 1505 ------------LENDREAQRSVLEHQLLDLEQK 1526
Cdd:TIGR02168 947 eeysltleeaeaLENKIEDDEEEARRRLKRLENK 980
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
872-1444 |
3.60e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 95.00 E-value: 3.60e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 872 QELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSalyqmqletekervsLLETLLRTQKELADASQQLER 951
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE---------------LELELEEAQAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 952 LRQDMKIQKLKEQettgmlqaQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKV 1031
Cdd:COG1196 300 LEQDIARLEERRR--------ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1032 KVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADf 1111
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE- 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1112 VAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQA--QAQLASLCSVLQQALGSAC 1189
Cdd:COG1196 451 EAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvkAALLLAGLRGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1190 ESRPELRGGGDSAPTLWG-PDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDT 1268
Cdd:COG1196 531 GVEAAYEAALEAALAAALqNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1269 EAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQ 1348
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAE 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1349 VEHLQAcvaeaqaqADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSnRERE 1428
Cdd:COG1196 691 EELELE--------EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELP-EPPD 761
|
570
....*....|....*.
gi 189458802 1429 VETLQAEVQELEKQRE 1444
Cdd:COG1196 762 LEELERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
565-1354 |
6.84e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 6.84e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 565 VEVAAALARAEQSIVELSGSENSLKAEVAdlraAAVKLGALNEAL-ALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSA 643
Cdd:TIGR02168 182 ERTRENLDRLEDILNELERQLKSLERQAE----KAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEE 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 644 LQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEE 723
Cdd:TIGR02168 258 LTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 724 TLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKE 803
Cdd:TIGR02168 338 ELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 804 viqgevkclklELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLER 883
Cdd:TIGR02168 418 -----------RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 884 ERAE---LETKLREQQTEMEAIRAQ-REEERSQADSALYQMQLETEKERVSLLETLLR------TQKELADASQQLERLR 953
Cdd:TIGR02168 487 LQARldsLERLQENLEGFSEGVKALlKNQSGLSGILGVLSELISVDEGYEAAIEAALGgrlqavVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 954 QDmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDD---SQRLVKEEIEEK 1030
Cdd:TIGR02168 567 QN-ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDldnALELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1031 VKVAQECSRIQKE--LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1108
Cdd:TIGR02168 646 RIVTLDGDLVRPGgvITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1109 ADFVAREAQLLEELEASRVAEQ---QLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1185
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEEriaQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1186 GSACESRPELRGggdsaptlwgpdpdqngasrlfkrwslptalspeavalALQKLHQDVWKARQARDDLRDQVQKLVQRL 1265
Cdd:TIGR02168 806 DELRAELTLLNE--------------------------------------EAANLRERLESLERRIAATERRLEDLEEQI 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1266 TDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKL 1345
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
....*....
gi 189458802 1346 SAQVEHLQA 1354
Cdd:TIGR02168 928 ELRLEGLEV 936
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1279-2048 |
3.11e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 3.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1279 LQDLQRQLSQSQEEKS-KWEGRQNSLESELRDLHEtaasLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAcva 1357
Cdd:TIGR02168 202 LKSLERQAEKAERYKElKAELRELELALLVLRLEE----LREELEELQEELKEAEEELEELTAELQELEEKLEELRL--- 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1358 eaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQ 1437
Cdd:TIGR02168 275 -------EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1438 ELEKQREMQKAALEllsldlkkrsREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENdrEAQRSVLE 1517
Cdd:TIGR02168 348 ELKEELESLEAELE----------ELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEA--RLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1518 HQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKmitELEGQREMQRVALTHLTLDLEERSQELQ 1597
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE---ELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1598 AQSSQLHELENHSTHLAKELQERDQeVTSQRQQIDELQKQQEQLAQALERKGQELVL---------QKERIQVLEDQRTL 1668
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSG-LSGILGVLSELISVDEGYEAAIEAALGGRLQavvvenlnaAKKAIAFLKQNELG 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1669 QTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQR--GSLEHLKLILRDKEKEVECQ-----QERIQELQ 1741
Cdd:TIGR02168 572 RVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKalSYLLGGVLVVDDLDNALELAkklrpGYRIVTLD 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1742 GHM-----------GQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQV---LQGQLEEAQRDLAQR 1807
Cdd:TIGR02168 652 GDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEleqLRKELEELSRQISAL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1808 DHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAE 1887
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAE 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1888 SREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAqATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQA 1967
Cdd:TIGR02168 812 LTLLNEEAANLRERLESLERRIAATERRLEDLEEQI-EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALA 890
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1968 ALQEKEQSL-LEQAELSHTLEASTAALQAtLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQL 2046
Cdd:TIGR02168 891 LLRSELEELsEELRELESKRSELRRELEE-LREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEE 969
|
..
gi 189458802 2047 LE 2048
Cdd:TIGR02168 970 AR 971
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
844-1647 |
3.13e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 3.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 844 SLERQKvaheEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADsalyqmqlE 923
Cdd:TIGR02168 204 SLERQA----EKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE--------E 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 924 TEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQ 1003
Cdd:TIGR02168 272 LRLEVSELEEEIEELQKELYALANEISRLEQQKQILR-ERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1004 KQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDI 1083
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1084 QEAQegQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASlwaqEAKATQLQLQLRSTESQLE----- 1158
Cdd:TIGR02168 431 EEAE--LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA----ERELAQLQARLDSLERLQEnlegf 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1159 -----ALVAEQQPENQAQAQLASLCSV-------LQQALGS---------------ACESRPELRGGGDSAPTLWGPDPD 1211
Cdd:TIGR02168 505 segvkALLKNQSGLSGILGVLSELISVdegyeaaIEAALGGrlqavvvenlnaakkAIAFLKQNELGRVTFLPLDSIKGT 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1212 QNGASRLFKRWSLPTALS--------PEAVALALQKLHQDVWKARQARDDLRDQVQK-------------------LVQR 1264
Cdd:TIGR02168 585 EIQGNDREILKNIEGFLGvakdlvkfDPKLRKALSYLLGGVLVVDDLDNALELAKKLrpgyrivtldgdlvrpggvITGG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1265 LTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEK 1344
Cdd:TIGR02168 665 SAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQ 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1345 LSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSN 1424
Cdd:TIGR02168 745 LEERIAQLSK---ELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAAN 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1425 REREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLqqeqiqeleqcrsvLEHLPMAVQEREQKLSVQRDQIRE 1504
Cdd:TIGR02168 822 LRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE--------------LEELIEELESELEALLNERASLEE 887
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1505 LENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALEleeshhKVESQQKMITElEGQREMQRVALTH 1584
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEV------RIDNLQERLSE-EYSLTLEEAEALE 960
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189458802 1585 LTLDLEERSQElqaqsSQLHELENHSTHL----------AKELQERDQEVTsqrQQIDELQKQQEQLAQALER 1647
Cdd:TIGR02168 961 NKIEDDEEEAR-----RRLKRLENKIKELgpvnlaaieeYEELKERYDFLT---AQKEDLTEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1371-2132 |
2.40e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.35 E-value: 2.40e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1371 EDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLsnrEREVETLQAEVQELEKQREMQKAAL 1450
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEEL---QKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1451 ELLSLDLKKRSREVDLQQEQiqeleqcrsvLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVI 1530
Cdd:TIGR02168 312 ANLERQLEELEAQLEELESK----------LDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1531 ESQRGQIQDLKKQLgtleclaleleeshhkvESQQKMITELEGQREMQRVALTHLTLDLEERSQELQaqSSQLHELENHS 1610
Cdd:TIGR02168 382 ETLRSKVAQLELQI-----------------ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE--EAELKELQAEL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1611 THLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKiLEEDLEQIKHSLRERSQE 1690
Cdd:TIGR02168 443 EELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG-FSEGVKALLKNQSGLSGI 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1691 LASQWQLVHERADDGKSPSKGQRGSLEHLklILRDKEKEVECQQERIQELQGHMGQLE--------------QQLQGLHR 1756
Cdd:TIGR02168 522 LGVLSELISVDEGYEAAIEAALGGRLQAV--VVENLNAAKKAIAFLKQNELGRVTFLPldsikgteiqgndrEILKNIEG 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1757 KVGETSLLLTHREQETATLQ---------QHLQEAKEQ-----GELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQ 1822
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNALELakklrPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREI 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1823 DQEESmklKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAEsrehekavlalQQRC 1902
Cdd:TIGR02168 680 EELEE---KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE-----------VEQL 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1903 AEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAEL 1982
Cdd:TIGR02168 746 EERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1983 SHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQE 2062
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRE 905
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 2063 KQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPL------PAQQELERLQTAL 2132
Cdd:TIGR02168 906 LESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKieddeeEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
425-1139 |
2.77e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.35 E-value: 2.77e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 425 DQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSA 504
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 505 QGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGS 584
Cdd:TIGR02168 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQ 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 585 ENSLKAEVADLRAaavKLGALNEALA-LDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKT 663
Cdd:TIGR02168 395 IASLNNEIERLEA---RLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 664 QLETQLQKAEEAGAELQAELRGTreekEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLAraVQEKEALVRErAALE 743
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSL----ERLQENLEGFSEGVKALLKNQSGLSGILGVLSELIS--VDEGYEAAIE-AALG 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 744 VRLQAVErdrqdltehVLGLRSAKEqlesnLFEAQQQNSVIQVTKGQLEVQIQTIIQAK--EVIQGEVKCLKLELDAERT 821
Cdd:TIGR02168 545 GRLQAVV---------VENLNAAKK-----AIAFLKQNELGRVTFLPLDSIKGTEIQGNdrEILKNIEGFLGVAKDLVKF 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 822 RAEQEWD--------AVARQLAQAEQEGQASLERQKV----------------AHEEEVNRLQEKwEKERSWLQQELDKT 877
Cdd:TIGR02168 611 DPKLRKAlsyllggvLVVDDLDNALELAKKLRPGYRIvtldgdlvrpggvitgGSAKTNSSILER-RREIEELEEKIEEL 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 878 LET---LERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERvSLLETLLRTQKELADASQQLERLRQ 954
Cdd:TIGR02168 690 EEKiaeLEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE-QLEERIAQLSKELTELEAEIEELEE 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 955 DMKIQKLKEQETTGmLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVA 1034
Cdd:TIGR02168 769 RLEEAEEELAEAEA-EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI 847
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1035 QECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEadfvAR 1114
Cdd:TIGR02168 848 EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELR----EK 923
|
730 740
....*....|....*....|....*
gi 189458802 1115 EAQLLEELEASRVAEQQLRASLWAQ 1139
Cdd:TIGR02168 924 LAQLELRLEGLEVRIDNLQERLSEE 948
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1231-1874 |
3.35e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.84 E-value: 3.35e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1231 EAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDL 1310
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1311 HETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESE 1390
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE---ELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1391 RERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALEllsldlkkrsrevdlqqeq 1470
Cdd:COG1196 385 AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE------------------- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1471 iqeleqcrsvlehlpmAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECL 1550
Cdd:COG1196 446 ----------------EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1551 ALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHElenhstHLAKELQERDQEVtsQRQQ 1630
Cdd:COG1196 510 VKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIE------YLKAAKAGRATFL--PLDK 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1631 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSK 1710
Cdd:COG1196 582 IRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGS 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1711 GQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE 1790
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEEL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1791 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESM-KLKTSALQ--AALEQAHATLKERQGELEEHREQVRRLQEEL 1867
Cdd:COG1196 742 LEEEELLEEEALEELPEPPDLEELERELERLEREIEALgPVNLLAIEeyEELEERYDFLSEQREDLEEARETLEEAIEEI 821
|
....*..
gi 189458802 1868 EVEGRQV 1874
Cdd:COG1196 822 DRETRER 828
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
796-1352 |
3.50e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 3.50e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 796 QTIIQAKEVIQGEVKCLKLE-LDAERTRAEQEWDAVARQLAQAE---QEGQASLERQKVAHEE---EVNRLQEKWEKERS 868
Cdd:COG1196 216 RELKEELKELEAELLLLKLReLEAELEELEAELEELEAELEELEaelAELEAELEELRLELEElelELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 869 WLQQE------LDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQlETEKERVSLLETLLRTQKEL 942
Cdd:COG1196 296 ELARLeqdiarLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE-EAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 943 ADASQQLERLRQDmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRL 1022
Cdd:COG1196 375 AEAEEELEELAEE-LLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1023 VKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQdiQEAQEGQRELGVQVELLRQ 1102
Cdd:COG1196 454 LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA--ALLLAGLRGLAGAVAVLIG 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1103 EVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKAtqlqlqlRSTESQLEALVAEQQPENQAQAQLASLCSVLQ 1182
Cdd:COG1196 532 VEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAG-------RATFLPLDKIRARAALAAALARGAIGAAVDLV 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1183 QALGSACESRPELRGGGDSAPTLWGPDPDQNGASR-----LFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQ 1257
Cdd:COG1196 605 ASDLREADARYYVLGDTLLGRTLVAARLEAALRRAvtlagRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1258 VQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDREL 1337
Cdd:COG1196 685 AERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
570
....*....|....*
gi 189458802 1338 LQASKEKLSAQVEHL 1352
Cdd:COG1196 765 LERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
386-894 |
5.87e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.60 E-value: 5.87e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 386 DRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRE 465
Cdd:COG1196 280 ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 466 RELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLT 545
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 546 LREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQ 625
Cdd:COG1196 440 EEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 626 ENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEElkdkLSEAHHQQE 705
Cdd:COG1196 520 RGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARA----ALAAALARG 595
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 706 TATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQ 785
Cdd:COG1196 596 AIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALL 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 786 VTKGQLEVQIQTIIQAKEviqgevkclKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEK 865
Cdd:COG1196 676 EAEAELEELAERLAEEEL---------ELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEE 746
|
490 500 510
....*....|....*....|....*....|..
gi 189458802 866 ERSWLQQE---LDKTLETLERERAELETKLRE 894
Cdd:COG1196 747 LLEEEALEelpEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
441-756 |
6.69e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.72 E-value: 6.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 441 LTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVR 520
Cdd:TIGR02168 661 ITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEA 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 521 ERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAV 600
Cdd:TIGR02168 741 EVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 601 KLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQ 680
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELS 900
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 681 AELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLAR--------AVQEKEALVRERAALEVRLQAVERD 752
Cdd:TIGR02168 901 EELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEeysltleeAEALENKIEDDEEEARRRLKRLENK 980
|
....
gi 189458802 753 RQDL 756
Cdd:TIGR02168 981 IKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1412-2252 |
1.45e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 1.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1412 QENLALLAQTLSNREREVETLQAEVQELEKQREMQK----AALELLSLDLKKRSREVDLQQEQIQELeqcRSVLEHLPMA 1487
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERQAEKAERYKELKAelreLELALLVLRLEELREELEELQEELKEA---EEELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1488 VQEREQKLSVQRDQIRELEND-REAQRSVLEHQLL--DLEQKAQVIESQRGQIQDLKKQLGTLECLALEleeshhKVESQ 1564
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEiEELQKELYALANEisRLEQQKQILRERLANLERQLEELEAQLEELES------KLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1565 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQA 1644
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1645 LERKGQELVLQKERIQVLE----DQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLK 1720
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAElkelQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1721 LILRDKEKEVECQQERIQE---LQGHMGQLEQQL-------QGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGelRE 1790
Cdd:TIGR02168 496 RLQENLEGFSEGVKALLKNqsgLSGILGVLSELIsvdegyeAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELG--RV 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1791 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAH--ATLKERQGELEEHREQVRRLQEELE 1868
Cdd:TIGR02168 574 TFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLvvDDLDNALELAKKLRPGYRIVTLDGD 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1869 VEGR------QVRALEEVLGDLRAESREHEKAVLALQQRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA 1939
Cdd:TIGR02168 654 LVRPggvitgGSAKTNSSILERRREIEELEEKIEELEEKIAElekALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1940 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQ 2019
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELT 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2020 AQALQHHEVTQHLQQELcQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLES-LKELQLTVAQREEEILML 2098
Cdd:TIGR02168 814 LLNEEAANLRERLESLE-RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESeLEALLNERASLEEALALL 892
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2099 REassprhralpaekpalqplpaqqELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQeitmflqasvLERE 2178
Cdd:TIGR02168 893 RS-----------------------ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLE----------VRID 939
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189458802 2179 SEQQRLQEELVLSRQaleeqqsggphstsradqgpkvgqgsqsgEVETEPSPGVEEKERLTQRLERLQQAVAEL 2252
Cdd:TIGR02168 940 NLQERLSEEYSLTLE-----------------------------EAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
243-888 |
1.59e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 1.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 243 ARLLLLVAKTQALEKEAHEKSQELMQLKSHGDlekaELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAEL 322
Cdd:TIGR02168 302 QQKQILRERLANLERQLEELEAQLEELESKLD----ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 323 MEHEASLSRNAQEEKLSLQQVIKAITQALASVEE-----EDTVTQSSGHEDSLQSDCNGLSQFDPQDPDRALTLVQSVLT 397
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERLEARLERledrrERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 398 RRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALA---------GQTVGLQGEVDSLSREREL 468
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKallknqsglSGILGVLSELISVDEGYEA 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 469 -LQKARGELQQQLEVLEQEAWRL-----------RRMNMEL-QLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAK 535
Cdd:TIGR02168 538 aIEAALGGRLQAVVVENLNAAKKaiaflkqnelgRVTFLPLdSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 536 QSESLSELL---TLREALESSR----------LEGELLK-------------QERVEVAAALARAEQSIVELSGSENSLK 589
Cdd:TIGR02168 618 LSYLLGGVLvvdDLDNALELAKklrpgyrivtLDGDLVRpggvitggsaktnSSILERRREIEELEEKIEELEEKIAELE 697
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 590 AEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQL 669
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 670 QKAEEAGAELQAELRGTREEKEELKDKLSEahhqqetatahleqLHQDAERQEETLARAVQEKEALVRERAALEVRLQAV 749
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDE--------------LRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 750 ERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCL---KLELDAERTRAEQE 826
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELeskRSELRRELEELREK 923
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 827 WDAVARQLAQAEQEGQASLERQKVAHE---EEVNRLQEKWEKERSWLQQELDKtletLERERAEL 888
Cdd:TIGR02168 924 LAQLELRLEGLEVRIDNLQERLSEEYSltlEEAEALENKIEDDEEEARRRLKR----LENKIKEL 984
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1482-2281 |
2.20e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 76.31 E-value: 2.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1482 EHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLG-TLECLALELEESHHK 1560
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESqSQEDLRNQLQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1561 VESQQKMITELEGQREMQRVALTHLTLDLEERSQEL--------QAQSSQLHELENHST--------HLAKELQERDQEV 1624
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIrsilvdfeEASGKKIYEHDSMSTmhfrslgsAISKILRELDTEI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1625 TSQRQQIDELQKQQEQLAQALERKGQELVLQ-KERIQVLEDQRTLQTKILEEDleqiKHSLRERSQELASQWQLVHERAD 1703
Cdd:pfam15921 234 SYLKGRIFPVEDQLEALKSESQNKIELLLQQhQDRIEQLISEHEVEITGLTEK----ASSARSQANSIQSQLEIIQEQAR 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1704 DGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQElqghmgQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAK 1783
Cdd:pfam15921 310 NQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIE------ELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1784 EQGELREQVLQGQLEEAQR-------DLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQ------ 1850
Cdd:pfam15921 384 ADLHKREKELSLEKEQNKRlwdrdtgNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNeslekv 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1851 ----GELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVlalqqrcaeqaqeheaEARTLQDSWLQAQAT 1926
Cdd:pfam15921 464 ssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAI----------------EATNAEITKLRSRVD 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1927 LteQEQELAALRAENQYSRRQEeaavSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqatldtcQASARQ 2006
Cdd:pfam15921 528 L--KLQELQHLKNEGDHLRNVQ----TECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAM-------QVEKAQ 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2007 LEEALRIREGEIQAQALQHHEVTQHLqQELCQKKEELRqlLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQl 2086
Cdd:pfam15921 595 LEKEINDRRLELQEFKILKDKKDAKI-RELEARVSDLE--LEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELN- 670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2087 tVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEI 2166
Cdd:pfam15921 671 -SLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSK 749
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2167 TMFLQASVLERESEQQRLQEElvlsRQALEEQQSggphstsradqgpkvgqgsqsgEVETEPSPGVEEKERLTQRLERLQ 2246
Cdd:pfam15921 750 IQFLEEAMTNANKEKHFLKEE----KNKLSQELS----------------------TVATEKNKMAGELEVLRSQERRLK 803
|
810 820 830
....*....|....*....|....*....|....*
gi 189458802 2247 QAVAELEVDRSKLQCHNAQLRTALEQVERERRKLK 2281
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1560-2281 |
2.23e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.25 E-value: 2.23e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1560 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1639
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1640 QLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKhSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHL 1719
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE-SLEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1720 KLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHRE-QETATLQQHLQEAKEQGELREQVLQGQLE 1798
Cdd:TIGR02168 392 ELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1799 EAQRDLAQRDHELETLRQEKQQTQDQEEsmklktsalqaALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALE 1878
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSLERLQE-----------NLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1879 EVLGdlraesrEHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTeqeqelAALRAENQYSRRQEEAAVSQAEAL 1958
Cdd:TIGR02168 541 AALG-------GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKG------TEIQGNDREILKNIEGFLGVAKDL 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1959 QEALSKAQAALQ---------EKEQSLLEQAELSH------TLEASTAALQATL----DTCQASARQLEEALRIREGEIQ 2019
Cdd:TIGR02168 608 VKFDPKLRKALSyllggvlvvDDLDNALELAKKLRpgyrivTLDGDLVRPGGVItggsAKTNSSILERRREIEELEEKIE 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2020 AQALQHHEVTQHLQ---QELCQKKEELRQLL-EKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2095
Cdd:TIGR02168 688 ELEEKIAELEKALAelrKELEELEEELEQLRkELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELE 767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2096 LMLREASSPRHRALpAEKPALQplpaqQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVL 2175
Cdd:TIGR02168 768 ERLEEAEEELAEAE-AEIEELE-----AQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2176 ERESEQQRLQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQsgevetepspgvEEKERLTQRLERLQQAVAELEVD 2255
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLE------------EALALLRSELEELSEELRELESK 909
|
730 740
....*....|....*....|....*.
gi 189458802 2256 RSKLQCHNAQLRTALEQVERERRKLK 2281
Cdd:TIGR02168 910 RSELRRELEELREKLAQLELRLEGLE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1027-1900 |
2.78e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.86 E-value: 2.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1027 IEEKVKVAQECSRIQKEL-EKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVK 1105
Cdd:TIGR02168 205 LERQAEKAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEEL----RLEVSELE 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1106 EKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1185
Cdd:TIGR02168 281 EEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEL 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1186 GSACESRPELRGGgdsaptlwgpdpdqngasrlfkrwslptalsPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRL 1265
Cdd:TIGR02168 361 EELEAELEELESR-------------------------------LEELEEQLETLRSKVAQLELQIASLNNEIERLEARL 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1266 TDTEAQKSQVHSELQDLQRQLSQSQEEKSkwEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKL 1345
Cdd:TIGR02168 410 ERLEDRRERLQQEIEELLKKLEEAELKEL--QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1346 SAQVEHLQACVAEAqaqadaaavleEDLRTARSALKLKNEELESERERAQALQE-QGELKVAQGKALQENLALLAqtlsn 1424
Cdd:TIGR02168 488 QARLDSLERLQENL-----------EGFSEGVKALLKNQSGLSGILGVLSELISvDEGYEAAIEAALGGRLQAVV----- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1425 rereVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRE 1504
Cdd:TIGR02168 552 ----VENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLV 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1505 LENDREA--QRSVLEHQLL------DL-----------EQKAQVIESQRGQIQDLKKQLGTLEClaleleeshhKVESQQ 1565
Cdd:TIGR02168 628 VDDLDNAleLAKKLRPGYRivtldgDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEE----------KIAELE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1566 KMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQAL 1645
Cdd:TIGR02168 698 KALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEEL 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1646 ERKGQELVLQKERIQVLEDQRTLQTKILEEdLEQIKHSLRERSQELASQWQLVHERADDgkspskgQRGSLEHLKLILRD 1725
Cdd:TIGR02168 778 AEAEAEIEELEAQIEQLKEELKALREALDE-LRAELTLLNEEAANLRERLESLERRIAA-------TERRLEDLEEQIEE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1726 KEKEVECQQERIQELQGHMGQLEQQLQGLhrkvgetslllthrEQETATLQQHLQEAKEQGELREQVLQ---GQLEEAQR 1802
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEAL--------------LNERASLEEALALLRSELEELSEELReleSKRSELRR 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1803 DLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKE-RQGELEEHREQVRRLQEELEVEGR-------QV 1874
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENkIEDDEEEARRRLKRLENKIKELGPvnlaaieEY 995
|
890 900
....*....|....*....|....*.
gi 189458802 1875 RALEEVLGDLRAESREHEKAVLALQQ 1900
Cdd:TIGR02168 996 EELKERYDFLTAQKEDLTEAKETLEE 1021
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
489-1196 |
3.70e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.48 E-value: 3.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 489 RLRRMNMELQLQGDsAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSE-SLSELLTLREALESSRLEGELLKQERVEV 567
Cdd:TIGR02168 180 KLERTRENLDRLED-ILNELERQLKSLERQAEKAERYKELKAELRELELAlLVLRLEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 568 AAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVD 647
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 648 LAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLAR 727
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 728 AVQEKEALvrERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQg 807
Cdd:TIGR02168 419 LQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE- 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 808 evkclkleldAERTRAEQEWDAVARQLAQAEQEGQAslerqkVAHEEEVNRLQEKWEKE-----RSWLQQELDKTLE--- 879
Cdd:TIGR02168 496 ----------RLQENLEGFSEGVKALLKNQSGLSGI------LGVLSELISVDEGYEAAieaalGGRLQAVVVENLNaak 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 880 ----TLERERAELETKLREQQTEMEAIRAQREEERSQADSAL-YQMQLETEKERVS-LLETLL---RTQKELADASQQLE 950
Cdd:TIGR02168 560 kaiaFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLgVAKDLVKFDPKLRkALSYLLggvLVVDDLDNALELAK 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 951 RLRQDMKIQKLK--------------EQETTGMLQ-----AQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMS 1011
Cdd:TIGR02168 640 KLRPGYRIVTLDgdlvrpggvitggsAKTNSSILErrreiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRK 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1012 QLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEgqr 1091
Cdd:TIGR02168 720 ELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE--- 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1092 elgvQVELLRQEVKEKEADFvareAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQ 1171
Cdd:TIGR02168 797 ----ELKALREALDELRAEL----TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI 868
|
730 740
....*....|....*....|....*
gi 189458802 1172 AQLASLCSVLQQALGSACESRPELR 1196
Cdd:TIGR02168 869 EELESELEALLNERASLEEALALLR 893
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
829-1544 |
5.39e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 5.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 829 AVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQqELDKTLETLERERAELEtKLREQQTEMEAIRAQree 908
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIID-EKRQQLERLRREREKAE-RYQALLKEKREYEGY--- 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 909 ERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQH 988
Cdd:TIGR02169 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASL 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 989 RDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEA 1068
Cdd:TIGR02169 307 ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1069 DSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLeELEASRvaeQQLRASLWAQEAKATQLQL 1148
Cdd:TIGR02169 387 LKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN-ELEEEK---EDKALEIKKQEWKLEQLAA 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1149 QLRSTESQLEALVAEQqpeNQAQAQLASLCSVLQQALGSACESRPELRGG-------GDSAPTLWG-------------- 1207
Cdd:TIGR02169 463 DLSKYEQELYDLKEEY---DRVEKELSKLQRELAEAEAQARASEERVRGGraveevlKASIQGVHGtvaqlgsvgeryat 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1208 ----------------PDPDQNGASRLFKR-----------------WSLPTALSPE------------------AVALA 1236
Cdd:TIGR02169 540 aievaagnrlnnvvveDDAVAKEAIELLKRrkagratflplnkmrdeRRDLSILSEDgvigfavdlvefdpkyepAFKYV 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1237 LQK--LHQDVWKARQARDDLR-------------------DQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSK 1295
Cdd:TIGR02169 620 FGDtlVVEDIEAARRLMGKYRmvtlegelfeksgamtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRR 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1296 WEGRQNSLESELRDLHETAASLQSRLRQAElqkMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRT 1375
Cdd:TIGR02169 700 IENRLDELSQELSDASRKIGEIEKEIEQLE---QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1376 ARSAL-----KLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAAL 1450
Cdd:TIGR02169 777 LEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1451 ELLSLDLKKRSREVdlqQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELendrEAQRSVLEHQLLDLEQKAQVI 1530
Cdd:TIGR02169 857 ENLNGKKEELEEEL---EELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL----EAQIEKKRKRLSELKAKLEAL 929
|
810
....*....|....
gi 189458802 1531 ESQRGQIQDLKKQL 1544
Cdd:TIGR02169 930 EEELSEIEDPKGED 943
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
458-1171 |
7.52e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.79 E-value: 7.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 458 EVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNmELQLQGDSAQGEKLEQQEELHLAVREReRLQETLVGLEAKQS 537
Cdd:PTZ00121 1095 EAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAE-EARKAEDARKAEEARKAEDAKRVEIAR-KAEDARKAEEARKA 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 538 ESLSELLTLREALESSRLEgELLKQERVEVAAALARAEQ--SIVELSGSENSLKAEvADLRAAAVKLGAlNEALALDKVE 615
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAE-ELRKAEDARKAEAARKAEEerKAEEARKAEDAKKAE-AVKKAEEAKKDA-EEAKKAEEER 1249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 616 LNQQLLQLEQENQSLCSRVEA---AEQLRSALQVDLAEAERRREAL--WEKKTQLETQLQKAEEA--GAELQAELRGTRE 688
Cdd:PTZ00121 1250 NNEEIRKFEEARMAHFARRQAaikAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAEEAkkADEAKKKAEEAKK 1329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 689 EKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETlARAVQEKEALVRERAAlEVRLQAVERDRQDltehvlglrSAKE 768
Cdd:PTZ00121 1330 KADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK-AEAAEKKKEEAKKKAD-AAKKKAEEKKKAD---------EAKK 1398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 769 QLESNLFEAQQQNSVIQVTKGQLEVQIQtiiqAKEVIQGEvkclKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQ 848
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKK----AEEKKKAD----EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK 1470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 849 KVaheeevNRLQEKWEKERSwlQQELDKTLETLERERAELETKLREQQTEMEAIRAqreEERSQADsalyqmQLETEKER 928
Cdd:PTZ00121 1471 KA------DEAKKKAEEAKK--ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKA---EEAKKAD------EAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 929 VSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQkqVED 1008
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK--AEE 1611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1009 LMSQLVAHDDSQRLVKEEiEEKVKVAQECSRIQKELEKenaslALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQE 1088
Cdd:PTZ00121 1612 AKKAEEAKIKAEELKKAE-EEKKKVEQLKKKEAEEKKK-----AEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEE 1685
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1089 GQRElgvqvellRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPEN 1168
Cdd:PTZ00121 1686 DEKK--------AAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK 1757
|
...
gi 189458802 1169 QAQ 1171
Cdd:PTZ00121 1758 KIA 1760
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
938-1700 |
9.52e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 9.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 938 TQKELADASQQLERLrQDMkIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLD-----LQKQVEDLMSQ 1012
Cdd:TIGR02168 177 TERKLERTRENLDRL-EDI-LNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELReeleeLQEELKEAEEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1013 LVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE 1092
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1093 LGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAS---LWAQEAKATQLQLQLRSTESQLEALVAEQQPENQ 1169
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELeeqLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1170 AQAQLASLCSVLQQALGSACESRPELRGGGdsaptlwgpdpdqngasrlFKRWSLPTALSPEAVALALQKLHQDVWKARQ 1249
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAELEE-------------------LEEELEELQEELERLEEALEELREELEEAEQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1250 ARDDLRDQVQKLVQRLTDTEAQKSQvHSELQDLQRQLSQSQEEKSKWEGR-------------------QNSLESELRDL 1310
Cdd:TIGR02168 476 ALDAAERELAQLQARLDSLERLQEN-LEGFSEGVKALLKNQSGLSGILGVlselisvdegyeaaieaalGGRLQAVVVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1311 HETAASLQSRLRQAELQK-----MEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLE---------EDLRTA 1376
Cdd:TIGR02168 555 LNAAKKAIAFLKQNELGRvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1377 rsalklkNEELESERERAQALQEQGEL----KVAQGKALQENLALLAQT--LSNREREVETLQAEVQELEKQREMQKAAL 1450
Cdd:TIGR02168 635 -------LELAKKLRPGYRIVTLDGDLvrpgGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRKEL 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1451 ELLSLDLKKRSREVDLQQEQIQELeqcRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVI 1530
Cdd:TIGR02168 708 EELEEELEQLRKELEELSRQISAL---RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEI 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1531 ESQRGQIQDLKKQLGTLECLALELEESHH----KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHEL 1606
Cdd:TIGR02168 785 EELEAQIEQLKEELKALREALDELRAELTllneEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEL 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1607 ENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELvlqKERIQVLEDQRTLQTKIlEEDLEQIKHSLRE 1686
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKR---SELRRELEELREKLAQL-ELRLEGLEVRIDN 940
|
810
....*....|....
gi 189458802 1687 RSQELASQWQLVHE 1700
Cdd:TIGR02168 941 LQERLSEEYSLTLE 954
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
491-1048 |
2.26e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 73.25 E-value: 2.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 491 RRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQ--SESLSELLTLREALESSRLEGELLKQERVEVA 568
Cdd:PTZ00121 1277 ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKkaEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 569 AALARAEQ--SIVELSGSENSLKAEVADLRAAAVKLG------ALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQL 640
Cdd:PTZ00121 1357 DEAEAAEEkaEAAEKKKEEAKKKADAAKKKAEEKKKAdeakkkAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 641 RSALQVDLAEAERRREAlwEKKTQLETQLQKAEEAGAELQAELRGTREEK-EELKDKLSEAHHQQETATAHLEQLHQDAE 719
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKA--EEAKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 720 RQEETLARAVQEKEALVRERAALEVRlQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQtii 799
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAK-KAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAE--- 1590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 800 QAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRlqekwekerswlQQELDKTLE 879
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEE-KKKVEQLKKKEAEEKKK------------AEELKKAEE 1657
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 880 TLERERAELETKLREQQTEMEAIRAQREEERSQADsalyqmQLETEKERVSLLETLLRTQKELADASQQLERLRQD--MK 957
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE------ALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEEnkIK 1731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 958 IQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLaafQKDKLDLQKQVEDLMSQLVAHDDSQRlvKEEIEEKVKVAQEC 1037
Cdd:PTZ00121 1732 AEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEE---EKKAEEIRKEKEAVIEEELDEEDEKR--RMEVDKKIKDIFDN 1806
|
570
....*....|.
gi 189458802 1038 SRIQKELEKEN 1048
Cdd:PTZ00121 1807 FANIIEGGKEG 1817
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
256-963 |
2.52e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.79 E-value: 2.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 256 EKEAHEKSQELMQLKSHgDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEA-SLSRNAQ 334
Cdd:TIGR02169 219 EKREYEGYELLKEKEAL-ERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIG 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 335 EEKLSLQQVIKAITQALASVEE-EDTVTQSSGHEDSLQSDCNGLSQfDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGC 413
Cdd:TIGR02169 298 ELEAEIASLERSIAEKERELEDaEERLAKLEAEIDKLLAEIEELER-EIEEERKRRDKLTEEYAELKEELEDLRAELEEV 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 414 QEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRM 493
Cdd:TIGR02169 377 DKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWK 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 494 NMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALE--SSRLEG------ELLKQER- 564
Cdd:TIGR02169 457 LEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEvlKASIQGvhgtvaQLGSVGEr 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 565 ----VEVAAAlARAEQSIVELSGSE--------------------NSLKAEVADLRAAAVKlGALNEALALDKVELNQQL 620
Cdd:TIGR02169 537 yataIEVAAG-NRLNNVVVEDDAVAkeaiellkrrkagratflplNKMRDERRDLSILSED-GVIGFAVDLVEFDPKYEP 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 621 LQLEQENQSLC-SRVEAAEQL---------------RSALQVDLAEAERRRE----ALWEKKTQLETQLQKAEEAGAELQ 680
Cdd:TIGR02169 615 AFKYVFGDTLVvEDIEAARRLmgkyrmvtlegelfeKSGAMTGGSRAPRGGIlfsrSEPAELQRLRERLEGLKRELSSLQ 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 681 AELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHV 760
Cdd:TIGR02169 695 SELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDL 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 761 LGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQ-IQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQ 839
Cdd:TIGR02169 775 HKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSrIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEK 854
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 840 EgQASLERQKVAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQAdsALYQ 919
Cdd:TIGR02169 855 E-IENLNGKKEELEEELEELEAALR--------DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRL--SELK 923
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 189458802 920 MQLETEKERVSLLETLLRTQKELADASQQLERLRqdMKIQKLKE 963
Cdd:TIGR02169 924 AKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQ--AELQRVEE 965
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1735-1940 |
2.83e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 72.64 E-value: 2.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1735 ERIQELQGHMGQLEqqlqGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETL 1814
Cdd:COG4913 225 EAADALVEHFDDLE----RAHEALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1815 RQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGE-LEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1893
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNGGDrLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAE 380
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 189458802 1894 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE 1940
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAE 427
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1372-1890 |
5.34e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.61 E-value: 5.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1372 DLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQ-------TLSNREREVETLQAEVQELEKQRE 1444
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAeiedlreTIAETEREREELAEEVRDLRERLE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1445 MQKAALE--LLSLDLKKRSREV--DLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQL 1520
Cdd:PRK02224 290 ELEEERDdlLAEAGLDDADAEAveARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1521 LDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITE----LEGQREMQRVALTHLTLDLEERSQEL 1596
Cdd:PRK02224 370 SELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREerdeLREREAELEATLRTARERVEEAEALL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1597 QAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERkGQELVLQKERIQVLEDQRTLQTKILEED 1676
Cdd:PRK02224 450 EAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLER-AEDLVEAEDRIERLEERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1677 LEQIKH------SLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVEcQQERIQELQGHMGQLEQQ 1750
Cdd:PRK02224 529 RETIEEkreraeELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1751 LQGLHRKVGETSLLLTHReqetatlQQHLQEAKEQ-GELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMK 1829
Cdd:PRK02224 608 IERLREKREALAELNDER-------RERLAEKRERkRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189458802 1830 LKTSALQAALEQAhATLKERQGELEEHREQVRRLQEElevegrqVRALEEVLGDLRAESRE 1890
Cdd:PRK02224 681 AEIGAVENELEEL-EELRERREALENRVEALEALYDE-------AEELESMYGDLRAELRQ 733
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
469-1185 |
6.02e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 71.64 E-value: 6.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 469 LQKARGELqqqlEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVG----LEAKQSESLSELL 544
Cdd:TIGR02169 172 KEKALEEL----EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKekeaLERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 545 TLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSEN--------SLKAEVADLRAAAVKLGALNEALALDKVEL 616
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlrvkekigELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 617 NQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDK 696
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 697 LSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFE 776
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 777 AQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLkLELDAERTRAEQEW-------------------DAVAR---QL 834
Cdd:TIGR02169 488 LQRELAEAEAQARASEERVRGGRAVEEVLKASIQGV-HGTVAQLGSVGERYataievaagnrlnnvvvedDAVAKeaiEL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 835 AQAEQEGQAS---LERQKVAHEE--------------EVNRLQEKWEKERSWLQQ--------ELDKTL----------- 878
Cdd:TIGR02169 567 LKRRKAGRATflpLNKMRDERRDlsilsedgvigfavDLVEFDPKYEPAFKYVFGdtlvvediEAARRLmgkyrmvtleg 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 879 ETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLL-RTQKELADASQQLERLRQDMK 957
Cdd:TIGR02169 647 ELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLdELSQELSDASRKIGEIEKEIE 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 958 iQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLvaHDDSQRLVKEEIEEKVKVAQec 1037
Cdd:TIGR02169 727 -QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL--NDLEARLSHSRIPEIQAELS-- 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1038 sriqkELEKENASLALSLVEKEKRLlilqeadSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVKEKEADFVAREAQ 1117
Cdd:TIGR02169 802 -----KLEEEVSRIEARLREIEQKL-------NRLTLEKEYLEKEIQELQEQRIDL----KEQIKSIEKEIENLNGKKEE 865
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 1118 LLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQAL 1185
Cdd:TIGR02169 866 LEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL 933
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1255-1823 |
6.28e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 71.22 E-value: 6.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1255 RDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRqaelqkmEAQND 1334
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERD-------DLLAE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1335 RELLQASKEKLSAQVEHLQAcvaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGelkvaqgKALQEN 1414
Cdd:PRK02224 302 AGLDDADAEAVEARREELED----------RDEELRDRLEECRVAAQAHNEEAESLREDADDLEERA-------EELREE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1415 LALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQqeqiqeleqcRSVLEHLPMAVQEREQK 1494
Cdd:PRK02224 365 AAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEEL----------REERDELREREAELEAT 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1495 LSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITELEGQ 1574
Cdd:PRK02224 435 LRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1575 REmQRVALTHLtldLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQkqqeQLAQALERKGQELvl 1654
Cdd:PRK02224 515 EE-RREDLEEL---IAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAR----EEVAELNSKLAEL-- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1655 qKERIQVLEDQRTLQTKIleEDLEQIKHSLRERSQELASQWQLVHERADDGKSpskgqrgslehlklilRDKEKEVECQQ 1734
Cdd:PRK02224 585 -KERIESLERIRTLLAAI--ADAEDEIERLREKREALAELNDERRERLAEKRE----------------RKRELEAEFDE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1735 ERIQELQGHMGQLEQQLQGLHRKvgetsllLTHREQETATLQQHLQEAKEQGELREqvlqgQLEEAQRDLAQRDHELETL 1814
Cdd:PRK02224 646 ARIEEAREDKERAEEYLEQVEEK-------LDELREERDDLQAEIGAVENELEELE-----ELRERREALENRVEALEAL 713
|
....*....
gi 189458802 1815 RQEKQQTQD 1823
Cdd:PRK02224 714 YDEAEELES 722
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
507-1029 |
1.11e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.45 E-value: 1.11e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 507 EKLEQQEELHLAVRERER--LQETLVGLEAKQSESLSELLTL----------REALESSRLEGELLKQERVEVAAALARA 574
Cdd:PRK02224 184 DQRGSLDQLKAQIEEKEEkdLHERLNGLESELAELDEEIERYeeqreqaretRDEADEVLEEHEERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 575 EQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERR 654
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 655 REALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEA 734
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 735 LVRERAALEVRLQAVERDRQDLTEhvlglrsakeqlesnLFEAQQQNSVIQVTKGQLEVqiQTIIQAKEVIQgevkclkl 814
Cdd:PRK02224 424 LREREAELEATLRTARERVEEAEA---------------LLEAGKCPECGQPVEGSPHV--ETIEEDRERVE-------- 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 815 ELDAERTRAEQEWDAVARQLAQAEQegQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKtLETLERERAELETKLRE 894
Cdd:PRK02224 479 ELEAELEDLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEELIAERRETIEEKRER-AEELRERAAELEAEAEE 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 895 QQTEMEAIRAQREEERSQADSalYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAqL 974
Cdd:PRK02224 556 KREAAAEAEEEAEEAREEVAE--LNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAE-K 632
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 975 QETQQELKEAAQQHRDDLAAFQKDKL-DLQKQVEDLMSQLVAHDDSQR----LVKEEIEE 1029
Cdd:PRK02224 633 RERKRELEAEFDEARIEEAREDKERAeEYLEQVEEKLDELREERDDLQaeigAVENELEE 692
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
484-1108 |
2.34e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.78 E-value: 2.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 484 EQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQE 563
Cdd:PTZ00121 1239 AEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAD 1318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 564 RVEVAAALARAEQSIVELSGSENSLKAEVA--DLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSlCSRVEAAEQLR 641
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAkaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK-AEEKKKADEAK 1397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 642 SALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAElqaELRGTREEK---EELKDKLSEAHHQQEtatahLEQLHQDA 718
Cdd:PTZ00121 1398 KKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD---EAKKKAEEAkkaDEAKKKAEEAKKAEE-----AKKKAEEA 1469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 719 ERQEETLARAVQEKEALVRERAALEVRLQAVE-RDRQDLTEHVLGLRSAKEQLESN-LFEAQQQNSVIQVTKGQLEVQIQ 796
Cdd:PTZ00121 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADEaKKAAEAKKKADEAKKAEEAKKADeAKKAEEAKKADEAKKAEEKKKAD 1549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 797 TIIQAKEVIQGEVKcLKLEldaERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEK-ERSWLQQELD 875
Cdd:PTZ00121 1550 ELKKAEELKKAEEK-KKAE---EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKaEEAKIKAEEL 1625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 876 KTLETLERERAELETKLREQQTEMEAIRaqREEERSQADSALYQMQLETEKERVsllETLLRTQKELADASQQLERLRQD 955
Cdd:PTZ00121 1626 KKAEEEKKKVEQLKKKEAEEKKKAEELK--KAEEENKIKAAEEAKKAEEDKKKA---EEAKKAEEDEKKAAEALKKEAEE 1700
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 956 M-KIQKLKEQEttgmlqAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLmsqlvahddsqrlvKEEIEEKVKVA 1034
Cdd:PTZ00121 1701 AkKAEELKKKE------AEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA--------------KKDEEEKKKIA 1760
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 1035 QECSRIQKELEKenaslalslVEKEKRLLI---LQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1108
Cdd:PTZ00121 1761 HLKKEEEKKAEE---------IRKEKEAVIeeeLDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEME 1828
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
815-1663 |
4.09e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.94 E-value: 4.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 815 ELDAERTRAEQEWDAVARQLAQAEQ-EGQASLERQKVAHE-EEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKL 892
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLiIDEKRQQLERLRRErEKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 893 REQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRqdmKIQKLKEQEttgmlQA 972
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLE---RSIAEKERE-----LE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 973 QLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLA 1052
Cdd:TIGR02169 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1053 LSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEadfvareaQLLEELEASRVAEQQl 1132
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE--------WKLEQLAADLSKYEQ- 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1133 raSLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQA----------LGSACESRP---ELRGGG 1199
Cdd:TIGR02169 470 --ELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASiqgvhgtvaqLGSVGERYAtaiEVAAGN 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1200 DSAPTLWGPDPDQNGASRLFKRWSLPtalspEAVALALQKLHQdvwKARQARDDLRDQVQKLVQRLTDTEAQ-KSQVHSE 1278
Cdd:TIGR02169 548 RLNNVVVEDDAVAKEAIELLKRRKAG-----RATFLPLNKMRD---ERRDLSILSEDGVIGFAVDLVEFDPKyEPAFKYV 619
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1279 LQDlqRQLSQSQEEKSKWEG--RQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACV 1356
Cdd:TIGR02169 620 FGD--TLVVEDIEAARRLMGkyRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1357 AEaqaqadaaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEV 1436
Cdd:TIGR02169 698 RR----------IENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARI 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1437 QELEKQREMQKAALELL--SLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDR---EA 1511
Cdd:TIGR02169 768 EELEEDLHKLEEALNDLeaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRidlKE 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1512 QRSVLEHQL----LDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEEshhKVESQQKMITELEGQREMQRVALTHLTL 1587
Cdd:TIGR02169 848 QIKSIEKEIenlnGKKEELEEELEELEAALRDLESRLGDLKKERDELEA---QLRELERKIEELEAQIEKKRKRLSELKA 924
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1588 DLEERSQELQAQSSQLHELENHSTHLAKE--LQERDQEVTSQRQQIDE-----LQKQQEQLAQALERKGQELVLQKERIQ 1660
Cdd:TIGR02169 925 KLEALEEELSEIEDPKGEDEEIPEEELSLedVQAELQRVEEEIRALEPvnmlaIQEYEEVLKRLDELKEKRAKLEEERKA 1004
|
...
gi 189458802 1661 VLE 1663
Cdd:TIGR02169 1005 ILE 1007
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1252-2043 |
1.03e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.40 E-value: 1.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1252 DDLRDQVQK-----LVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHEtaaslqsrlrqael 1326
Cdd:TIGR02169 214 QALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNK-------------- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1327 qKMEAQNDRELLQASKE--KLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQgelk 1404
Cdd:TIGR02169 280 -KIKDLGEEEQLRVKEKigELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDK---- 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1405 vaqgkalqenlalLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQcrsVLEHL 1484
Cdd:TIGR02169 355 -------------LTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQE---ELQRL 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1485 PMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQ 1564
Cdd:TIGR02169 419 SEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQ 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1565 QKMITELEGQREMQRvalthltLDLEERSQELQAQSSQLHEL-ENHSTHLAKELQERDQEVTSQRqqiDELQKQQEQLAQ 1643
Cdd:TIGR02169 499 ARASEERVRGGRAVE-------EVLKASIQGVHGTVAQLGSVgERYATAIEVAAGNRLNNVVVED---DAVAKEAIELLK 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1644 AlERKGQELVLQKERIQvleDQRTLQTKILEEDLEQIKHSLRERSQELAS------QWQLVHERADDGKSPSKGQR---- 1713
Cdd:TIGR02169 569 R-RKAGRATFLPLNKMR---DERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvfGDTLVVEDIEAARRLMGKYRmvtl 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1714 -------------GSLEHLKLILRDKEKEVECQQ--ERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQH 1778
Cdd:TIGR02169 645 egelfeksgamtgGSRAPRGGILFSRSEPAELQRlrERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1779 LQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ-----AHATLKERQGEL 1853
Cdd:TIGR02169 725 IEQLEQE----EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAEL 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1854 EEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHE---AEARTLQDSWLQAQATLTEQ 1930
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEnlnGKKEELEEELEELEAALRDL 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1931 EQELAAL-----RAENQYS--RRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqATLDTCQAS 2003
Cdd:TIGR02169 881 ESRLGDLkkerdELEAQLRelERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAE 959
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 189458802 2004 ARQLEEALRiREGEIQAQALQHHEVTQHLQQELCQKKEEL 2043
Cdd:TIGR02169 960 LQRVEEEIR-ALEPVNMLAIQEYEEVLKRLDELKEKRAKL 998
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
398-929 |
1.11e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 67.63 E-value: 1.11e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 398 RRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVG-LQGEVDSLSRERELLQKARGEL 476
Cdd:COG4913 285 FAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEqLEREIERLERELEERERRRARL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 477 QQQLEVL-------EQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAV----RERERLQETLVGLEAKQSESLSELLT 545
Cdd:COG4913 365 EALLAALglplpasAEEFAALRAEAAALLEALEEELEALEEALAEAEAALrdlrRELRELEAEIASLERRKSNIPARLLA 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 546 LREALESS--------RLEGELLkqervEVAAALARAEQSI-VELSGSENSLKAEVADLRAAAVKLGALNEALALD--KV 614
Cdd:COG4913 445 LRDALAEAlgldeaelPFVGELI-----EVRPEEERWRGAIeRVLGGFALTLLVPPEHYAAALRWVNRLHLRGRLVyeRV 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 615 ELNQQLLQLEQ-ENQSLCSRVEAAE------------QLRSALQVDLAEAERR-------------REALWEKKTQLETQ 668
Cdd:COG4913 520 RTGLPDPERPRlDPDSLAGKLDFKPhpfrawleaelgRRFDYVCVDSPEELRRhpraitragqvkgNGTRHEKDDRRRIR 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 669 LQ-----KAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAvqekeALVRERAALE 743
Cdd:COG4913 600 SRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVA-----SAEREIAELE 674
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 744 VRLQAVERDRQDLTEhvlgLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTI------IQAKEVIQGEVKCLKLELD 817
Cdd:COG4913 675 AELERLDASSDDLAA----LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAeeeldeLQDRLEAAEDLARLELRAL 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 818 AERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQT 897
Cdd:COG4913 751 LEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDGLP 830
|
570 580 590
....*....|....*....|....*....|..
gi 189458802 898 EMEAIRAQREEERSQADSALYQMQLETEKERV 929
Cdd:COG4913 831 EYEERFKELLNENSIEFVADLLSKLRRAIREI 862
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1763-2206 |
1.31e-10 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 67.28 E-value: 1.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1763 LLLTHREQETATLQQHLQEAKEQGELREQVlqGQLEEAQRDLAQ-----RDHEleTLRQEKQQTQDQEESMKLKTSALQA 1837
Cdd:COG3096 286 RALELRRELFGARRQLAEEQYRLVEMAREL--EELSARESDLEQdyqaaSDHL--NLVQTALRQQEKIERYQEDLEELTE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1838 ALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAEsrehekavlALQQRCAEQAQEheaeartlq 1917
Cdd:COG3096 362 RLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTR---------AIQYQQAVQALE--------- 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1918 dswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATl 1997
Cdd:COG3096 424 ----KARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQTAR- 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1998 dtcqasarqleEALRiREGEIQAQALQhhevTQHLQQELcqkkEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRL 2077
Cdd:COG3096 499 -----------ELLR-RYRSQQALAQR----LQQLRAQL----AELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEEL 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2078 LESLKelqltvAQREEEILMLREASSPRHRAlpaekpalqplpaQQELERLQTALRQTEAREIEWREKAQDLALSLAQSK 2157
Cdd:COG3096 559 LAELE------AQLEELEEQAAEAVEQRSEL-------------RQQLEQLRARIKELAARAPAWLAAQDALERLREQSG 619
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 189458802 2158 ASISSLQEITMFLQaSVLERESEQQRLQEELVLSRQALEEQ-----QSGGPHST 2206
Cdd:COG3096 620 EALADSQEVTAAMQ-QLLEREREATVERDELAARKQALESQierlsQPGGAEDP 672
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
196-772 |
1.55e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.88 E-value: 1.55e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 196 ATDRDLTELKAEHARLSGSLLTCCLRLTLRAQSRESSGSGRTE-ESEPARLLLLVAKTQALEKEAHEKSQELMQLKSHGD 274
Cdd:COG1196 250 ELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYElLAELARLEQDIARLEERRRELEERLEELEEELAELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 275 LEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEKLSLQQVIKAITQAlasv 354
Cdd:COG1196 330 EELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEEL---- 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 355 eeedtvtqssghedslqsdcnglsqfdpqdpdraltlvqsvltrrQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRAL 434
Cdd:COG1196 406 ---------------------------------------------EEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 435 REKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEE 514
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 515 LHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVAD 594
Cdd:COG1196 521 GLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 595 LRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEE 674
Cdd:COG1196 601 VDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 675 AGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQ 754
Cdd:COG1196 681 LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPP 760
|
570
....*....|....*...
gi 189458802 755 DLTEHVLGLRSAKEQLES 772
Cdd:COG1196 761 DLEELERELERLEREIEA 778
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
513-1111 |
6.30e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.94 E-value: 6.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 513 EELHLAVRERERLQETLVGLEA------KQSESLSELLTLREALES--SRLEGELLKQERVEVAAALARAEQSIVELSGS 584
Cdd:COG4913 238 ERAHEALEDAREQIELLEPIRElaeryaAARERLAELEYLRAALRLwfAQRRLELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 585 ENSLKAEVADLRAAAVKLGAlnealaldkvelnqqllqleqenqslcSRVEAAEQLRSALQVDLAEAERRREALWEKKTQ 664
Cdd:COG4913 318 LDALREELDELEAQIRGNGG---------------------------DRLEQLEREIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 665 LETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETAtahleqlHQDAERQEETLAravQEKEALVRERAALEV 744
Cdd:COG4913 371 LGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAA-------LRDLRRELRELE---AEIASLERRKSNIPA 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 745 RLQAVerdRQDLTEHvLGLRSAK-----EQLESNLFEAQQQNSVIQVTKGQ---LEVQIQTIIQAKEVIQGEVKCLKLEL 816
Cdd:COG4913 441 RLLAL---RDALAEA-LGLDEAElpfvgELIEVRPEEERWRGAIERVLGGFaltLLVPPEHYAAALRWVNRLHLRGRLVY 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 817 DAERTRAEQEW------DAVARQLAQAEQEGQASLERQ--------KVAHEEEVNRLQ--------------------EK 862
Cdd:COG4913 517 ERVRTGLPDPErprldpDSLAGKLDFKPHPFRAWLEAElgrrfdyvCVDSPEELRRHPraitragqvkgngtrhekddRR 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 863 WEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADsaLYQMQLETEKERVSLLEtllrTQKEL 942
Cdd:COG4913 597 RIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERRE--ALQRLAEYSWDEIDVAS----AEREI 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 943 ADASQQLERLRQDM-KIQKLKEQETTgmLQAQLQETQQELKEAaqqhRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQR 1021
Cdd:COG4913 671 AELEAELERLDASSdDLAALEEQLEE--LEAELEELEEELDEL----KGEIGRLEKELEQAEEELDELQDRLEAAEDLAR 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1022 L-VKEEIEEKVKVAQEC---SRIQKELEKENASLALSLVEKEKRLL-ILQEADSVRQQELSSLRQDIQEAQEGQRELGvq 1096
Cdd:COG4913 745 LeLRALLEERFAAALGDaveRELRENLEERIDALRARLNRAEEELErAMRAFNREWPAETADLDADLESLPEYLALLD-- 822
|
650
....*....|....*
gi 189458802 1097 vELLRQEVKEKEADF 1111
Cdd:COG4913 823 -RLEEDGLPEYEERF 836
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
429-1051 |
7.91e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 64.70 E-value: 7.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 429 EEGRALREKLQK-----LTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLE----VLEQEAWRLRRMNMELQL 499
Cdd:TIGR02169 211 ERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEeieqLLEELNKKIKDLGEEEQL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 500 QGDSAQGEKLEQQEELHLAV----RERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAE 575
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIaekeRELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLR 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 576 QSIVELSGSENSLKAEVADLRaaaVKLGALNEALAldkvELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRR 655
Cdd:TIGR02169 371 AELEEVDKEFAETRDELKDYR---EKLEKLKREIN----ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 656 EALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQ---DAERQEETLARAVQEK 732
Cdd:TIGR02169 444 EDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEErvrGGRAVEEVLKASIQGV 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 733 EALVRE--------RAALEV----RLQAV--------ERDRQDLTEHVLG---------LRSAKEQLESNL--------- 774
Cdd:TIGR02169 524 HGTVAQlgsvgeryATAIEVaagnRLNNVvveddavaKEAIELLKRRKAGratflplnkMRDERRDLSILSedgvigfav 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 775 ----FEAQQQNSVIQV------------------------------------TKGQLEVQIQTIIQAKE-----VIQGEV 809
Cdd:TIGR02169 604 dlveFDPKYEPAFKYVfgdtlvvedieaarrlmgkyrmvtlegelfeksgamTGGSRAPRGGILFSRSEpaelqRLRERL 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 810 KCLKLELD---AERTRAEQEWDAvARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQqELDKTLETLERERA 886
Cdd:TIGR02169 684 EGLKRELSslqSELRRIENRLDE-LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS-SLEQEIENVKSELK 761
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 887 ELETKLREQQTEMEAIRAQREE-ERSQADSALYQMQLET---EKERVSLLETLLRTQKELA----------DASQQLERL 952
Cdd:TIGR02169 762 ELEARIEELEEDLHKLEEALNDlEARLSHSRIPEIQAELsklEEEVSRIEARLREIEQKLNrltlekeyleKEIQELQEQ 841
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 953 RQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDdlaaFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVK 1032
Cdd:TIGR02169 842 RIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRD----LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK 917
|
730
....*....|....*....
gi 189458802 1033 VAQECSRIQKELEKENASL 1051
Cdd:TIGR02169 918 RLSELKAKLEALEEELSEI 936
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-1089 |
1.30e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 401 QAVQDLRQQLSGCQEAMSFLQQQHDQWEEEgRALREKLQKLTGERDAL-----AGQTVGLQGEVDSLSRERELLQKARGE 475
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLEPI-RELAERYAAARERLAELeylraALRLWFAQRRLELLEAELEELRAELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 476 LQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQ--------QEELHLAVRERERLQETLVGLEAKQSESLSELLTLR 547
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQIRGNGGDRLEQlereierlERELEERERRRARLEALLAALGLPLPASAEEFAALR 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 548 EALESSRlegELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKL--------GALNEALALDKVELNQq 619
Cdd:COG4913 387 AEAAALL---EALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEALGLDEAELPF- 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 620 llqleqenqsLCSRVE----------AAEQL----RSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAElrg 685
Cdd:COG4913 463 ----------VGELIEvrpeeerwrgAIERVlggfALTLLVPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERP--- 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 686 tREEKEELKDKLS-EAHHQQETATAHLEQLHQ----DAERQEETLARAVQeKEALVRERAalevRLQAVERDRQDLTEHV 760
Cdd:COG4913 530 -RLDPDSLAGKLDfKPHPFRAWLEAELGRRFDyvcvDSPEELRRHPRAIT-RAGQVKGNG----TRHEKDDRRRIRSRYV 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 761 LGL--RSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEvkclkleldAERTRAEQEWDAVARQLAQAE 838
Cdd:COG4913 604 LGFdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL---------AEYSWDEIDVASAEREIAELE 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 839 QEgQASLErqkvAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSAly 918
Cdd:COG4913 675 AE-LERLD----ASSDDLAALEEQLE--------ELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAA-- 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 919 qmQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQkD 998
Cdd:COG4913 740 --EDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLP-E 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 999 KLDLQKQVEDlmSQLVAH-DDSQRLVKEEIEEKV-----KVAQECSRIQKELEKENASLALSLVEKEKRLLIlqEADSVR 1072
Cdd:COG4913 817 YLALLDRLEE--DGLPEYeERFKELLNENSIEFVadllsKLRRAIREIKERIDPLNDSLKRIPFGPGRYLRL--EARPRP 892
|
730
....*....|....*..
gi 189458802 1073 QQELSSLRQDIQEAQEG 1089
Cdd:COG4913 893 DPEVREFRQELRAVTSG 909
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
695-1170 |
1.46e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.78 E-value: 1.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 695 DKLSEAHHQQETATAHLEQLhQDAERQEETLARAVQEKEALVRERAALevRLQAVERDRQDLTEHVLGLRSAKEQLESNL 774
Cdd:COG4913 235 DDLERAHEALEDAREQIELL-EPIRELAERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 775 FEAQQQNSVIQVTKGQLEVQIQTI-IQAKEVIQGEVKCLKLELDaERTRAEQEWDAVARQLAQAEQEGQASLERQKvahe 853
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELE-ERERRRARLEALLAALGLPLPASAEEFAALR---- 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 854 EEVNRLQEKWEKERSWLQQELDKT---LETLERERAELETKLREQQT-------EMEAIRAQREEERSQADSALY----- 918
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAeaaLRDLRRELRELEAEIASLERrksnipaRLLALRDALAEALGLDEAELPfvgel 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 919 -QMQLETEK-----ERV------SLL------------------ETLLRTQK-ELADASQQLERLRQDMKIQKL--KEQE 965
Cdd:COG4913 467 iEVRPEEERwrgaiERVlggfalTLLvppehyaaalrwvnrlhlRGRLVYERvRTGLPDPERPRLDPDSLAGKLdfKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 966 TTGMLQAQLQ--------ETQQELKEAAQ------QHRDDLAAFQKD-----------------KLD-LQKQVEDLMSQL 1013
Cdd:COG4913 547 FRAWLEAELGrrfdyvcvDSPEELRRHPRaitragQVKGNGTRHEKDdrrrirsryvlgfdnraKLAaLEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1014 VAHDDSQRLVKEEIEEKVKVAQECSRIQK--ELEKENASLALSLVEKEKRLLILQEADSV---RQQELSSLRQDIQEAQE 1088
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQRLAEysWDEIDVASAEREIAELEAELERLDASSDDlaaLEEQLEELEAELEELEE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1089 GQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPEN 1168
Cdd:COG4913 707 ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAE 786
|
..
gi 189458802 1169 QA 1170
Cdd:COG4913 787 EE 788
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
649-1374 |
3.68e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.47 E-value: 3.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 649 AEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEEtlARA 728
Cdd:PTZ00121 1094 EEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEE--ARK 1171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 729 VQEKEALVRERAALEVRLQAVERDRQDltehvlgLRSAKEQLesnlfEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGE 808
Cdd:PTZ00121 1172 AEDAKKAEAARKAEEVRKAEELRKAED-------ARKAEAAR-----KAEEERKAEEARKAEDAKKAEAVKKAEEAKKDA 1239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 809 VKCLKLEldAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHE----EEVNRLQEKWEKERSWLQQELDKTLETlERE 884
Cdd:PTZ00121 1240 EEAKKAE--EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADElkkaEEKKKADEAKKAEEKKKADEAKKKAEE-AKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 885 RAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSlletllRTQKELADASQQLERLRQDMKIQKLKEQ 964
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA------EEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 965 ETTGMLQAQLQETQQELKEAAQQhrddlAAFQKDKLDLQKQVEDLMSqlvahddsqrlvKEEIEEKVKVAQECSRIQKEL 1044
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKA-----AAAKKKADEAKKKAEEKKK------------ADEAKKKAEEAKKADEAKKKA 1453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1045 EKENASLALSLVEKEKRllilqEADSVRQQELSSLRQDiqEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEA 1124
Cdd:PTZ00121 1454 EEAKKAEEAKKKAEEAK-----KADEAKKKAEEAKKAD--EAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADE 1526
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1125 SRVAEQQLRASlWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPT 1204
Cdd:PTZ00121 1527 AKKAEEAKKAD-EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1205 LWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLH-QDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQV------HS 1277
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEaEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAeeakkaEE 1685
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1278 ELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDR----ELLQASKEKLSAQVEHLQ 1353
Cdd:PTZ00121 1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKkkaeEAKKDEEEKKKIAHLKKE 1765
|
730 740
....*....|....*....|.
gi 189458802 1354 ACVAEAQAQADAAAVLEEDLR 1374
Cdd:PTZ00121 1766 EEKKAEEIRKEKEAVIEEELD 1786
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
388-739 |
4.32e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 4.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 388 ALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERE 467
Cdd:TIGR02168 706 ELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE 785
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 468 LLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLR 547
Cdd:TIGR02168 786 ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELE 865
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 548 EALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLqleqen 627
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRID------ 939
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 628 qslcsrvEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQEta 707
Cdd:TIGR02168 940 -------NLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE-- 1010
|
330 340 350
....*....|....*....|....*....|..
gi 189458802 708 tahleqlhqDAERQEETLARAVQEKEALVRER 739
Cdd:TIGR02168 1011 ---------DLTEAKETLEEAIEEIDREARER 1033
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1852-2046 |
6.87e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 6.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1852 ELEEHREQVRRLQEELEVEGRQVRALEEVLGD------LRAESREHEKAVLALQQRCAEQAQEH-EAEARTLQDSWLQAQ 1924
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIELLEPIRELaeryaaARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1925 ATLTEQEQELAALRAE-NQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQAS 2003
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE 388
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 189458802 2004 ARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQL 2046
Cdd:COG4913 389 AAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1237-2006 |
9.93e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 9.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1237 LQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLhetaas 1316
Cdd:TIGR02169 296 IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL------ 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1317 lqsrlrQAELQKMEAQNdrellQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQA 1396
Cdd:TIGR02169 370 ------RAELEEVDKEF-----AETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1397 LQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKqrEMQKAALELLSLDLKKR---SREVDLQQEQIQE 1473
Cdd:TIGR02169 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK--ELSKLQRELAEAEAQARaseERVRGGRAVEEVL 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1474 LEQCRSVLEHLPMAVQEREQKLSV------QRDQIRELENDREAQRSVlehQLLDLEQKAQVIESQRGQIQDLKKQLGtL 1547
Cdd:TIGR02169 517 KASIQGVHGTVAQLGSVGERYATAievaagNRLNNVVVEDDAVAKEAI---ELLKRRKAGRATFLPLNKMRDERRDLS-I 592
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1548 ECLALELEESHHKVESQQK-------------MITELE-GQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHST-- 1611
Cdd:TIGR02169 593 LSEDGVIGFAVDLVEFDPKyepafkyvfgdtlVVEDIEaARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRse 672
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1612 -----HLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELV-LQKERIQVLEDQRTLQtkileEDLEQIKHSLR 1685
Cdd:TIGR02169 673 paelqRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGeIEKEIEQLEQEEEKLK-----ERLEELEEDLS 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1686 ERSQELAsqwqlvheraddgkspskgqrgslehlklilrDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVgetslll 1765
Cdd:TIGR02169 748 SLEQEIE--------------------------------NVKSELKELEARIEELEEDLHKLEEALNDLEARL------- 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1766 thREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHAT 1845
Cdd:TIGR02169 789 --SHSRIPEIQAELSKLEEE----VSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGK 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1846 LKERQGELEEHREQVRRLQEElevegrqvraleevLGDLRAESREHEKAVLALQQRcaEQAQEHEAEARTLQDSWLQAQA 1925
Cdd:TIGR02169 863 KEELEEELEELEAALRDLESR--------------LGDLKKERDELEAQLRELERK--IEELEAQIEKKRKRLSELKAKL 926
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1926 -TLTEQEQELAALRAENQYSRRQE---EAAVSQAEALQEALSKAQ----AALQEKEQSLLEQAELS---HTLEASTAALQ 1994
Cdd:TIGR02169 927 eALEEELSEIEDPKGEDEEIPEEElslEDVQAELQRVEEEIRALEpvnmLAIQEYEEVLKRLDELKekrAKLEEERKAIL 1006
|
810
....*....|..
gi 189458802 1995 ATLDTCQASARQ 2006
Cdd:TIGR02169 1007 ERIEEYEKKKRE 1018
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1796-2022 |
1.02e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.78 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1796 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVR 1875
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1876 ALEEVLGDLRAE---SREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAV 1952
Cdd:COG4942 101 AQKEELAELLRAlyrLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1953 SQAEALQEALSKAQAalqekeqsllEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQA 2022
Cdd:COG4942 181 AELEEERAALEALKA----------ERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1796-2100 |
1.12e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1796 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlKTSALQAALEQAHATL-----KERQGELEEHREQVRRLQEELEVE 1870
Cdd:TIGR02168 180 KLERTRENLDRLEDILNELERQLKSLERQAEKAE-RYKELKAELRELELALlvlrlEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1871 GRQVRALEEVLGDLRAESREHEKAVLALQQRcaeqAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEA 1950
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKE----LYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1951 AVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQ 2030
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2031 HLQQELCQKKEELRQLLEKAGARRSQEngIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLRE 2100
Cdd:TIGR02168 415 RRERLQQEIEELLKKLEEAELKELQAE--LEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
955-1874 |
1.43e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.47 E-value: 1.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 955 DMKIQKLKEQ-----ETTGMLQAQLQETQQELkEAAQQHRDDLAAFQKDKLDLQK-QVEDLMSQLVAHDDSQRLVKEEIE 1028
Cdd:TIGR02169 169 DRKKEKALEEleeveENIERLDLIIDEKRQQL-ERLRREREKAERYQALLKEKREyEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1029 EKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRqqelssLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1108
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLR------VKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1109 AdfvaREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSA 1188
Cdd:TIGR02169 322 E----RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1189 CESRPELRGGGDsaptlwgpdpdqngasRLFKRwslptalspeavalaLQKLHQDVWKARQARDDLRDQVQKLVQRLTDT 1268
Cdd:TIGR02169 398 KREINELKRELD----------------RLQEE---------------LQRLSEELADLNAAIAGIEAKINELEEEKEDK 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1269 EAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQ 1348
Cdd:TIGR02169 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGT 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1349 VEHL-------QACVAEAQAQADAAAVLEEDLRTARSALKLKNE-----------ELESERERAQALQEQGELKVAQgka 1410
Cdd:TIGR02169 527 VAQLgsvgeryATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRkagratflplnKMRDERRDLSILSEDGVIGFAV--- 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1411 lqeNLALLAQTLSNREREVETLQAEVQELEKQRE-MQKAALELLSLDLKKRSREVDLQQEQIQELEQcrsvlehlpMAVQ 1489
Cdd:TIGR02169 604 ---DLVEFDPKYEPAFKYVFGDTLVVEDIEAARRlMGKYRMVTLEGELFEKSGAMTGGSRAPRGGIL---------FSRS 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1490 EREQKLSVqRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLgtlECLALELEESHHKVESQQKMIT 1569
Cdd:TIGR02169 672 EPAELQRL-RERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEI---EQLEQEEEKLKERLEELEEDLS 747
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1570 ELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHlaKELQERDQEVTSQRQQIDELQKQQEQLAQALERKG 1649
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSH--SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLT 825
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1650 QELVLQKERIQVLEDQRtlqtkileEDLEQIKHSLRERSQELasqwqlvheraddgkspskgqRGSLEHLKLILRDKEKE 1729
Cdd:TIGR02169 826 LEKEYLEKEIQELQEQR--------IDLKEQIKSIEKEIENL---------------------NGKKEELEEELEELEAA 876
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1730 VECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDH 1809
Cdd:TIGR02169 877 LRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDV 956
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1810 ELEtlRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQV 1874
Cdd:TIGR02169 957 QAE--LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
502-1171 |
1.94e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.15 E-value: 1.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 502 DSAQGEKLEQQEELHLAVRERE--RLQETLVGLEA-KQSESLSELLTLREALESSRLEgELLKQERVEVAAALARAEqsi 578
Cdd:PTZ00121 1086 DNRADEATEEAFGKAEEAKKTEtgKAEEARKAEEAkKKAEDARKAEEARKAEDARKAE-EARKAEDAKRVEIARKAE--- 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 579 vELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQenqslcsrveaAEQLRSALQVDLAEAERRREAL 658
Cdd:PTZ00121 1162 -DARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARK-----------AEEERKAEEARKAEDAKKAEAV 1229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 659 wekktqletqlQKAEEAGAELQAELRGTREEKEELKDKLSEA---HHQQETATAHLEQLHQDAERQEETLARAVQEKEAL 735
Cdd:PTZ00121 1230 -----------KKAEEAKKDAEEAKKAEEERNNEEIRKFEEArmaHFARRQAAIKAEEARKADELKKAEEKKKADEAKKA 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 736 VRERAALEVRLQAVERDRQDltEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEviqgEVKCLKLE 815
Cdd:PTZ00121 1299 EEKKKADEAKKKAEEAKKAD--EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE----KAEAAEKK 1372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 816 LDAERTRAEqEWDAVARQLAQAEQEGQASLERQKVAheEEVNRLQEKWEKerswlQQELDKTLEtlERERAELETKLREQ 895
Cdd:PTZ00121 1373 KEEAKKKAD-AAKKKAEEKKKADEAKKKAEEDKKKA--DELKKAAAAKKK-----ADEAKKKAE--EKKKADEAKKKAEE 1442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 896 QTEMEAIRAQREEERsQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQ 975
Cdd:PTZ00121 1443 AKKADEAKKKAEEAK-KAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 976 ETQQELKEAAQQHRDDLA--AFQKDKLDLQKQVEDLMSqlvAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLAL 1053
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEAkkAEEKKKADELKKAEELKK---AEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1054 SLVEKEKRLlilqEADSVRQQELSSLR-QDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQL 1132
Cdd:PTZ00121 1599 KLYEEEKKM----KAEEAKKAEEAKIKaEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
650 660 670
....*....|....*....|....*....|....*....
gi 189458802 1133 RASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQ 1171
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAE 1713
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
663-1131 |
2.13e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.67 E-value: 2.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 663 TQLETQLQKAEEAgaELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLaravQEKEALVRERAAL 742
Cdd:PRK02224 190 DQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR----EELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 743 EVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTR 822
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 823 AEQEWDAVARQLAQAE--QEGQASLERQKVAHEEEVNRLQEKWEkerswlqqELDKTLETLERERAELETKLREQQTEME 900
Cdd:PRK02224 344 AESLREDADDLEERAEelREEAAELESELEEAREAVEDRREEIE--------ELEEEIEELRERFGDAPVDLGNAEDFLE 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 901 AIRAQREEERSqaDSALYQMQLETEKERVSLLETLLRTQK-----------------------------ELADASQQLER 951
Cdd:PRK02224 416 ELREERDELRE--REAELEATLRTARERVEEAEALLEAGKcpecgqpvegsphvetieedrerveeleaELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 952 LrqDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKV 1031
Cdd:PRK02224 494 V--EERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1032 KVAQECSRIQKELEKENASLAlslvekekrllilqeadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADF 1111
Cdd:PRK02224 572 EEVAELNSKLAELKERIESLE-------------------RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEK 632
|
490 500
....*....|....*....|
gi 189458802 1112 VAREAQLLEELEASRVAEQQ 1131
Cdd:PRK02224 633 RERKRELEAEFDEARIEEAR 652
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1428-1979 |
3.44e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.16 E-value: 3.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1428 EVETLQAEVQELEK-QREMQKAA--LELLSlDLKKRSREVDLQQEQIQELEQCRSVLEHlpmavQEREQKLSVQRDQIRE 1504
Cdd:COG4913 226 AADALVEHFDDLERaHEALEDAReqIELLE-PIRELAERYAAARERLAELEYLRAALRL-----WFAQRRLELLEAELEE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1505 LENDR---EAQRSVLEHQLLDLEQKAQVIESQR-----GQIQDLKKQLGTLECLALELEESHHKVESQQKMIT-ELEGQR 1575
Cdd:COG4913 300 LRAELarlEAELERLEARLDALREELDELEAQIrgnggDRLEQLEREIERLERELEERERRRARLEALLAALGlPLPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1576 EMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQID----ELQKQQEQLAQALERKGQE 1651
Cdd:COG4913 380 EEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSnipaRLLALRDALAEALGLDEAE 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1652 LVLQKERIQVLEDQ-----------RTLQTKIL--EEDLEQIKHSLRERSQELASQWQLVHERADDGKSPsKGQRGSLEH 1718
Cdd:COG4913 460 LPFVGELIEVRPEEerwrgaiervlGGFALTLLvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERP-RLDPDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1719 lKLILRDKEKEvecqqeriQELQGHMGQleqqlQGLHRKVGETSLLLTHREQETATLQ----QHLQEAKEQGELREQVLQ 1794
Cdd:COG4913 539 -KLDFKPHPFR--------AWLEAELGR-----RFDYVCVDSPEELRRHPRAITRAGQvkgnGTRHEKDDRRRIRSRYVL 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1795 GQleEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALE--QAHATLKERQGELEEHREQVRRLQEE---LEV 1869
Cdd:COG4913 605 GF--DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAELEAElerLDA 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1870 EGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEaEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEE 1949
Cdd:COG4913 683 SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELE-QAEEELDELQDRLEAAEDLARLELRALLEERFAAALGD 761
|
570 580 590
....*....|....*....|....*....|.
gi 189458802 1950 AAVSQ-AEALQEALSKAQAALQEKEQSLLEQ 1979
Cdd:COG4913 762 AVERElRENLEERIDALRARLNRAEEELERA 792
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
291-1097 |
3.55e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 3.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 291 LTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEE-------KLSLQQVIKAITQALASVEEEdtVTQS 363
Cdd:TIGR02169 179 LEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEgyellkeKEALERQKEAIERQLASLEEE--LEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 364 SGHEDSLQSDCNGLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTG 443
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 444 ERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERE 523
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 524 RLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLR----AAA 599
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQrelaEAE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 600 VKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQV------------DLAEAERRREALWEKKTQLET 667
Cdd:TIGR02169 497 AQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVaagnrlnnvvveDDAVAKEAIELLKRRKAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 668 QL------QKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEE----TLARAVQEK----- 732
Cdd:TIGR02169 577 FLplnkmrDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMGKyrmvTLEGELFEKsgamt 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 733 ------EALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQ 806
Cdd:TIGR02169 657 ggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLK 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 807 GEVKCLKLELDA---ERTRAEQEWDAVARQLAQ------AEQEGQASLERQKVAHE-EEVNRLQEKWEKERSWLQ---QE 873
Cdd:TIGR02169 737 ERLEELEEDLSSleqEIENVKSELKELEARIEEleedlhKLEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEarlRE 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 874 LDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSalyqmqLETEKErvSLLETLLRTQKELADASQQLERLR 953
Cdd:TIGR02169 817 IEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEN------LNGKKE--ELEEELEELEAALRDLESRLGDLK 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 954 QDmkIQKLKEQettgmlQAQLQETQQELKEAAQQHRDDLAafqkdklDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKV-- 1031
Cdd:TIGR02169 889 KE--RDELEAQ------LRELERKIEELEAQIEKKRKRLS-------ELKAKLEALEEELSEIEDPKGEDEEIPEEELsl 953
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1032 -KVAQECSRIQKE---LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQV 1097
Cdd:TIGR02169 954 eDVQAELQRVEEEiraLEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEA 1023
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
503-741 |
4.17e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 4.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 503 SAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELS 582
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 583 GSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLqleqenqslcSRVEAAEQLRSALQVDLAEAERRREALWEKK 662
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAV----------RRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 663 TQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAA 741
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1629-2240 |
4.25e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.00 E-value: 4.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1629 QQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSP 1708
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKK 1291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1709 SKGQRGSLEHLKLilrDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGEL 1788
Cdd:PTZ00121 1292 ADEAKKAEEKKKA---DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1789 REQvlqgQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlKTSALQAALEQahatlKERQGELEEHREQVRRlQEELE 1868
Cdd:PTZ00121 1369 AEK----KKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKK-KADELKKAAAA-----KKKADEAKKKAEEKKK-ADEAK 1437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1869 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQatltEQEQELAALRAENQYSRRQE 1948
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAE----EAKKKADEAKKAAEAKKKAD 1513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1949 EAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEE----ALRIREGEIQAQALQ 2024
Cdd:PTZ00121 1514 EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEdknmALRKAEEAKKAEEAR 1593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2025 HHEVTQHLQQELCQKKEELRQLLE---KAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEilmLREA 2101
Cdd:PTZ00121 1594 IEEVMKLYEEEKKMKAEEAKKAEEakiKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE---AKKA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2102 SSPRHRALPAEKPALQPLPAQQELERLQTALRQTE---AREIEWREKAQDLALSLAQSKASISSLQeitmflqasvlERE 2178
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEelkKKEAEEKKKAEELKKAEEENKIKAEEAK-----------KEA 1739
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189458802 2179 SEQQRLQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQSGEVETEPSPGVEEKERLTQ 2240
Cdd:PTZ00121 1740 EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1233-1449 |
7.51e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.08 E-value: 7.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1233 VALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHE 1312
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1313 TAASLQSRLRQ---------AELQKMEAQNDRELLQASK---------EKLSAQVEHLQACVAEAQAQADAAAVLEEDLR 1374
Cdd:COG4942 91 EIAELRAELEAqkeelaellRALYRLGRQPPLALLLSPEdfldavrrlQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1375 TARSALKLKNEELESERERAQALQEQGELKVAQgkaLQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAA 1449
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
652-1333 |
8.45e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.82 E-value: 8.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 652 ERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQE 731
Cdd:pfam15921 102 EKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLS 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 732 KEALVRERAALEVRLQavERDRQDLTEH----VLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIiqaKEVIQG 807
Cdd:pfam15921 182 HEGVLQEIRSILVDFE--EASGKKIYEHdsmsTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEAL---KSESQN 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 808 EVKCLkleLDAERTRAEQ-------------EWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQEL 874
Cdd:pfam15921 257 KIELL---LQQHQDRIEQliseheveitgltEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSEL 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 875 DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQletekervSLLETLLRTQKELADASQQLERL-- 952
Cdd:pfam15921 334 REAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ--------KLLADLHKREKELSLEKEQNKRLwd 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 953 ------------RQDMKIQKLKEQETTGMLQAQLQETQQELKEaaqqhrdDLAAFQKDKLDLQKqVEDLMSQLVAHDDSQ 1020
Cdd:pfam15921 406 rdtgnsitidhlRRELDDRNMEVQRLEALLKAMKSECQGQMER-------QMAAIQGKNESLEK-VSSLTAQLESTKEML 477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1021 RLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE---LGVQ- 1096
Cdd:pfam15921 478 RKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTEceaLKLQm 557
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1097 ------VELLRQEVK----------EKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEAL 1160
Cdd:pfam15921 558 aekdkvIEILRQQIEnmtqlvgqhgRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKL 637
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1161 VAEQQPE-------NQAQAQLASLCSVLQQALGSACES----RPELRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALS 1229
Cdd:pfam15921 638 VNAGSERlravkdiKQERDQLLNEVKTSRNELNSLSEDyevlKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKS 717
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1230 PEA-------VALALQKlhqDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNS 1302
Cdd:pfam15921 718 MEGsdghamkVAMGMQK---QITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEV 794
|
730 740 750
....*....|....*....|....*....|.
gi 189458802 1303 LESELRDLHETAASLQSRLRQAELQKMEAQN 1333
Cdd:pfam15921 795 LRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
510-1413 |
1.04e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.77 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 510 EQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLR----EALESSRLEGELLKQERVEVAAALARAEQSIVELSGSE 585
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRrereKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 586 NSLKAEVADLRAAAVKLGALNEALAldkvelnqqllqleQENQSLCSRVEA-AEQLRSALQVDLAEAERRREALWEKKTQ 664
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIE--------------QLLEELNKKIKDlGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 665 LETQLQKAEEAGAELQAELRGTREEKEELKDKLseahhqqetatahleqlhQDAERQEETLARAVQEKEAlvrERAALEV 744
Cdd:TIGR02169 313 KERELEDAEERLAKLEAEIDKLLAEIEELEREI------------------EEERKRRDKLTEEYAELKE---ELEDLRA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 745 RLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKclklELDAERtrae 824
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN----ELEEEK---- 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 825 qewDAVARQLAQAEQEGQaSLERQKVAHEEEVNRLQEKwekerswlQQELDKTLETLERERAELETKLREQQTEMEAIRA 904
Cdd:TIGR02169 444 ---EDKALEIKKQEWKLE-QLAADLSKYEQELYDLKEE--------YDRVEKELSKLQRELAEAEAQARASEERVRGGRA 511
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 905 QREEERSQADSALYQM-QLETEKER-VSLLETLL--RTQKELADASQQLERLrqdmkIQKLKEQETTGMLQAQLQETQQE 980
Cdd:TIGR02169 512 VEEVLKASIQGVHGTVaQLGSVGERyATAIEVAAgnRLNNVVVEDDAVAKEA-----IELLKRRKAGRATFLPLNKMRDE 586
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 981 LKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLV-------------AHDDSQRLV--KEEIEEKVKVAQECSR------ 1039
Cdd:TIGR02169 587 RRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFgdtlvvedieaarRLMGKYRMVtlEGELFEKSGAMTGGSRaprggi 666
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1040 -IQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELgvqvELLRQEVKEKEADFVAREAQL 1118
Cdd:TIGR02169 667 lFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEI----EKEIEQLEQEEEKLKERLEEL 742
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1119 LEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQaqlaslcsvLQQALGSACESRPELRGG 1198
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE---------IQAELSKLEEEVSRIEAR 813
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1199 GDSAptlwgpdpDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQarDDLRDQVQKLVQRLTDTEAQKSQVHSE 1278
Cdd:TIGR02169 814 LREI--------EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI--ENLNGKKEELEEELEELEAALRDLESR 883
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1279 LQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLrqaelqkmEAQNDREllqASKEKLSAQVEHLQACVAE 1358
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKL--------EALEEEL---SEIEDPKGEDEEIPEEELS 952
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1359 AQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQE 1413
Cdd:TIGR02169 953 LEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
399-899 |
1.47e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.97 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 399 RQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQ 478
Cdd:PRK02224 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRD 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 479 QLEVLEQEAWRLRRmnmelqlQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGE 558
Cdd:PRK02224 329 RLEECRVAAQAHNE-------EAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFG 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 559 LLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEA-------LALDKVELNQQLLQLEQENQSLC 631
Cdd:PRK02224 402 DAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAgkcpecgQPVEGSPHVETIEEDRERVEELE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 632 SRVEAAEQLRSALQ------VDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKdklSEAHHQQE 705
Cdd:PRK02224 482 AELEDLEEEVEEVEerleraEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELE---AEAEEKRE 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 706 TATAhleqLHQDAERQEETLARAVQEKEALVRERAALEvRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQ 785
Cdd:PRK02224 559 AAAE----AEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKR 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 786 VTKGQLEVQIQtiiqaKEVIQgevkclklELDAERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRLQEKWEk 865
Cdd:PRK02224 634 ERKRELEAEFD-----EARIE--------EAREDKERAEEYLEQVEEKLDELREE-RDDLQAEIGAVENELEELEELRE- 698
|
490 500 510
....*....|....*....|....*....|....
gi 189458802 866 ERSWLQQELDKtLETLERERAELETKLREQQTEM 899
Cdd:PRK02224 699 RREALENRVEA-LEALYDEAEELESMYGDLRAEL 731
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
884-1117 |
1.99e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 1.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 884 ERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQlETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKE 963
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-ALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 964 QETTGMLQAQLQETQQelkeAAQQHRDDLAAFQKDKLDLQKQVEdLMSQLVAHDdsqrlvKEEIEEKVKVAQECSRIQKE 1043
Cdd:COG4942 100 EAQKEELAELLRALYR----LGRQPPLALLLSPEDFLDAVRRLQ-YLKYLAPAR------REQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189458802 1044 LEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQ 1117
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1075-1880 |
2.14e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.61 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1075 ELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEA-DFVAREAQ------LLEELEASRVAEQQLRASLWAQEAKATQLQ 1147
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERyQALLKEKReyegyeLLKEKEALERQKEAIERQLASLEEELEKLT 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1148 LQLRSTESQLEALVAEQQPEN------------QAQAQLASLCSVLQQALGSACESRPELRgggDSAPTLwgpdpdQNGA 1215
Cdd:TIGR02169 258 EEISELEKRLEEIEQLLEELNkkikdlgeeeqlRVKEKIGELEAEIASLERSIAEKERELE---DAEERL------AKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1216 SRLFKRWSLPTALSPEAVALALQK--LHQDVWKARQARDDLRDQVQKL-------VQRLTDTEAQKSQVHSELQDLQRQL 1286
Cdd:TIGR02169 329 AEIDKLLAEIEELEREIEEERKRRdkLTEEYAELKEELEDLRAELEEVdkefaetRDELKDYREKLEKLKREINELKREL 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1287 SQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQacvaeaqaqadaa 1366
Cdd:TIGR02169 409 DRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLK------------- 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1367 avleEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENL----ALLAQTLSNRERE-------------- 1428
Cdd:TIGR02169 476 ----EEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIqgvhGTVAQLGSVGERYataievaagnrlnn 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1429 --VETLQAEVQELEKQREMQKAALELLSLDlKKRSREVDLQQEQIQeleqcrSVLEHLPMAVQEREQKLSVQRDQIRE-- 1504
Cdd:TIGR02169 552 vvVEDDAVAKEAIELLKRRKAGRATFLPLN-KMRDERRDLSILSED------GVIGFAVDLVEFDPKYEPAFKYVFGDtl 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1505 -LENDREAQRSVLEHQLLDLE----QKAQVI----ESQRGQIQDLKKQLGtleclaleleeshhKVESQQKMITELEGQR 1575
Cdd:TIGR02169 625 vVEDIEAARRLMGKYRMVTLEgelfEKSGAMtggsRAPRGGILFSRSEPA--------------ELQRLRERLEGLKREL 690
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1576 EMQRVALTHLTLDLEERSQELQAQSSQLHELEnhsthlaKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQ 1655
Cdd:TIGR02169 691 SSLQSELRRIENRLDELSQELSDASRKIGEIE-------KEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEL 763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1656 KERIQvledQRTLQTKILEEDLEQIKHSLRErsqelaSQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQE 1735
Cdd:TIGR02169 764 EARIE----ELEEDLHKLEEALNDLEARLSH------SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEK 833
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1736 RIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQEtatlqqhlqEAKEQGELREqvLQGQLEEAQRDLAQRDHELETLR 1815
Cdd:TIGR02169 834 EIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE---------LEELEAALRD--LESRLGDLKKERDELEAQLRELE 902
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189458802 1816 QEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQV------RRLQEELEVEGRQVRALEEV 1880
Cdd:TIGR02169 903 RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPeeelslEDVQAELQRVEEEIRALEPV 973
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
651-1030 |
3.30e-07 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 56.12 E-value: 3.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 651 AERRREALwEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLeQLHQDAERQEETLARAVQ 730
Cdd:PRK04863 278 ANERRVHL-EEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIERYQA 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 731 EKEALVrerAALEVRLQAVErdrqDLTEHVLGLRSAKEQLESNLFEAQ------QQNSVIQVTKGqleVQIQTIIQAKEV 804
Cdd:PRK04863 356 DLEELE---ERLEEQNEVVE----EADEQQEENEARAEAAEEEVDELKsqladyQQALDVQQTRA---IQYQQAVQALER 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 805 IQGEVKCLKLELD------AERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHE------EEVNRlQEKWEKERSWL-- 870
Cdd:PRK04863 426 AKQLCGLPDLTADnaedwlEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiaGEVSR-SEAWDVARELLrr 504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 871 ---QQELDKTLETLERERAELETKLREQQTemeAIRAQREeersqadsalYQMQLETEKERVSLLETLLrtqkeladasQ 947
Cdd:PRK04863 505 lreQRHLAEQLQQLRMRLSELEQRLRQQQR---AERLLAE----------FCKRLGKNLDDEDELEQLQ----------E 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 948 QLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQK---------DKLDLQKQVEDLMSQLVAHDD 1018
Cdd:PRK04863 562 ELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDAlarlreqsgEEFEDSQDVTEYMQQLLERER 641
|
410
....*....|..
gi 189458802 1019 SQRLVKEEIEEK 1030
Cdd:PRK04863 642 ELTVERDELAAR 653
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
523-1046 |
3.98e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.84 E-value: 3.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 523 ERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKL 602
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERI 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 603 GALNEalaldKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEagaeLQAE 682
Cdd:PRK03918 269 EELKK-----EIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE----KEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 683 LRGTREEKEELKDKLSE---AHHQQETATAHLEQLHQDAERqeetlaRAVQEKEALVRERAALEVRLQAVERDRQDLTEH 759
Cdd:PRK03918 340 LEELKKKLKELEKRLEEleeRHELYEEAKAKKEELERLKKR------LTGLTPEKLEKELEELEKAKEEIEEEISKITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 760 VLGLRSAKEQLESNLFEAQQQNSVIQVTKGQL-------------------EVQIQTIIQAKEVIQGEVKCLKLELDAER 820
Cdd:PRK03918 414 IGELKKEIKELKKAIEELKKAKGKCPVCGRELteehrkelleeytaelkriEKELKEIEEKERKLRKELRELEKVLKKES 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 821 TRAEQEwdAVARQLAQAEQE-GQASLERQKVAHE--EEVNRLQEKWEKERSWLQQELDKtLETLERERAELETKLREQQT 897
Cdd:PRK03918 494 ELIKLK--ELAEQLKELEEKlKKYNLEELEKKAEeyEKLKEKLIKLKGEIKSLKKELEK-LEELKKKLAELEKKLDELEE 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 898 EMEAIRAQREEERSQAdsalyqmqLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQ---AQL 974
Cdd:PRK03918 571 ELAELLKELEELGFES--------VEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAeteKRL 642
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189458802 975 QETQQELKEAAQQH-RDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEK 1046
Cdd:PRK03918 643 EELRKELEELEKKYsEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEK 715
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
795-1648 |
4.46e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 55.75 E-value: 4.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 795 IQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERswlQQEL 874
Cdd:pfam02463 186 AELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQ---EIEK 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 875 DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQ 954
Cdd:pfam02463 263 EEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEK 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 955 DMKIQKLKEQEttgmLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLmsqlvahdDSQRLVKEEIEEKVKVA 1034
Cdd:pfam02463 343 ELKELEIKREA----EEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK--------EEELELKSEEEKEAQLL 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1035 QECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAR 1114
Cdd:pfam02463 411 LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLL 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1115 EAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRStESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPE 1194
Cdd:pfam02463 491 SRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH-GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRA 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1195 LRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQ 1274
Cdd:pfam02463 570 LTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLR 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1275 VHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEaqndrELLQASKEKLSAQVEHLQA 1354
Cdd:pfam02463 650 KGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKE-----QREKEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1355 CVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQA 1434
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELR 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1435 EVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCR--SVLEHLPMAVQEREQKLSVQRDQIRELENDREAQ 1512
Cdd:pfam02463 805 ALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLekLAEEELERLEEEITKEELLQELLLKEEELEEQKL 884
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1513 RSVLEHQLLDLEQKAQVIESQRGQIQDLKKQlgtLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEER 1592
Cdd:pfam02463 885 KDELESKEEKEKEEKKELEEESQKLNLLEEK---ENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEER 961
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 1593 SQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERK 1648
Cdd:pfam02463 962 NKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1431-1867 |
6.35e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 6.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1431 TLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEqcrSVLEHLPMAVQEREQKLSVQRDQIRELENdre 1510
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLK---DEQNKIKKQLSEKQKELEQNNKKIKELEK--- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1511 aQRSVLEHQLLDLE-QKAQVIESQ-RGQIQDLKKQLgtleclalelEESHHKVESQQKMITELEGQREMQRVALTHLTLD 1588
Cdd:TIGR04523 289 -QLNQLKSEISDLNnQKEQDWNKElKSELKNQEKKL----------EEIQNQISQNNKIISQLNEQISQLKKELTNSESE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1589 LEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTL 1668
Cdd:TIGR04523 358 NSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIK 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1669 QTKILeEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLE 1748
Cdd:TIGR04523 438 NNSEI-KDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLT 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1749 QQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEqgELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESM 1828
Cdd:TIGR04523 517 KKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF--ELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQK 594
|
410 420 430
....*....|....*....|....*....|....*....
gi 189458802 1829 KLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEEL 1867
Cdd:TIGR04523 595 EKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
548-1175 |
7.38e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.84 E-value: 7.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 548 EALESSRLE--GELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQ 625
Cdd:pfam12128 271 ETLIASRQEerQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 626 ENQSLCSRVEAAEQLRSALQVDLAEAERRREALW-------------EKKTQLETQLQKAEEAGAELQAELRGTREEKEE 692
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIkeqnnrdiagikdKLAKIREARDRQLAVAEDDLQALESELREQLEA 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 693 LKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLES 772
Cdd:pfam12128 431 GKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQ 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 773 NLFEAQQQNSVIQVTKGQLEVQIQTIIQ--AKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKV 850
Cdd:pfam12128 511 ASRRLEERQSALDELELQLFPQAGTLLHflRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRI 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 851 AHEEevnrlqekwekersWLQQEldktlETLERERAELETKLREQQTEMEAIraqrEEERSQADSALYQMQLETEKERVS 930
Cdd:pfam12128 591 DVPE--------------WAASE-----EELRERLDKAEEALQSAREKQAAA----EEQLVQANGELEKASREETFARTA 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 931 LLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDlm 1010
Cdd:pfam12128 648 LKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEG-- 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1011 sqlvAHDDSQRLVKEEIE-EKVKVAQECSRIQKELEKENASLA-----LSLVEKEKRLLILQEAD-SVRQQELSSLRQDI 1083
Cdd:pfam12128 726 ----ALDAQLALLKAAIAaRRSGAKAELKALETWYKRDLASLGvdpdvIAKLKREIRTLERKIERiAVRRQEVLRYFDWY 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1084 QEAQEGQRE-LGVQVELLRQEVKEKEADFvareAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLeALVA 1162
Cdd:pfam12128 802 QETWLQRRPrLATQLSNIERAISELQQQL----ARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKL-ATLK 876
|
650
....*....|...
gi 189458802 1163 EQQPENQAQAQLA 1175
Cdd:pfam12128 877 EDANSEQAQGSIG 889
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
855-1703 |
8.77e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 54.59 E-value: 8.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 855 EVNRLQEKWEKERSWLQQELDKTLETlERERAELETKLREQQTEMEAIRAQREEERSQADSALyqMQLETEKERVSLLET 934
Cdd:pfam02463 143 KIEIIAMMKPERRLEIEEEAAGSRLK-RKKKEALKKLIEETENLAELIIDLEELKLQELKLKE--QAKKALEYYQLKEKL 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 935 LLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLV 1014
Cdd:pfam02463 220 ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELK 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1015 AHDDSQRLVKEEIEEKVKVAQ-ECSRIQKELEKE-----NASLALSLVEKEKRLLILQEADSVRQQELSSLRQD------ 1082
Cdd:pfam02463 300 SELLKLERRKVDDEEKLKESEkEKKKAEKELKKEkeeieELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEellakk 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1083 -IQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEEL-------EASRVAEQQLRASLWAQEAKATQLQLQLRSTE 1154
Cdd:pfam02463 380 kLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLlkeekkeELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1155 SQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVA 1234
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVE 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1235 LALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLesELRDLHETA 1314
Cdd:pfam02463 540 NYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL--DKATLEADE 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1315 ASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERA 1394
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRR 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1395 QALQEQGELKVAQgkALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQEL 1474
Cdd:pfam02463 698 QLEIKKKEQREKE--ELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKE 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1475 EQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALEL 1554
Cdd:pfam02463 776 LAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1555 EESHHKVESQQKMI-TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDE 1633
Cdd:pfam02463 856 LERLEEEITKEELLqELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEE 935
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189458802 1634 LQKQQEQLAQALERKGQE-LVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERAD 1703
Cdd:pfam02463 936 EPEELLLEEADEKEKEENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKK 1006
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1251-2022 |
1.00e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.57 E-value: 1.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1251 RDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEekskwegRQNSLESELRDLHETAASLQSRLRQAElqkmE 1330
Cdd:COG3096 280 RRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSA-------RESDLEQDYQAASDHLNLVQTALRQQE----K 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1331 AQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERA----QALQeqgelkvA 1406
Cdd:COG3096 349 IERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAiqyqQAVQ-------A 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1407 QGKAlQENLALLAQTLSNREREVETLQAEVQELEKQRemqkaalellsLDLKKRSREVDLQQEQIQELEQcrsVLEHLPM 1486
Cdd:COG3096 422 LEKA-RALCGLPDLTPENAEDYLAAFRAKEQQATEEV-----------LELEQKLSVADAARRQFEKAYE---LVCKIAG 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1487 AVqEREQKLSVQRDQIRELENDRE--AQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQ 1564
Cdd:COG3096 487 EV-ERSQAWQTARELLRRYRSQQAlaQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQ 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1565 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQER---DQEVTSQRQQIDELQKQQEQL 1641
Cdd:COG3096 566 LEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQSGEAladSQEVTAAMQQLLEREREATVE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1642 AQALERKGQELVLQKERIQVL---EDQRTLQTK---------------------------------ILEEDLEQIKHSLR 1685
Cdd:COG3096 646 RDELAARKQALESQIERLSQPggaEDPRLLALAerlggvllseiyddvtledapyfsalygparhaIVVPDLSAVKEQLA 725
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1686 ER-----------------------SQELA-------SQWQLVHERADdgKSPSKGQRGSLEHLKLILRDKEKEVE---- 1731
Cdd:COG3096 726 GLedcpedlyliegdpdsfddsvfdAEELEdavvvklSDRQWRYSRFP--EVPLFGRAAREKRLEELRAERDELAEqyak 803
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1732 --CQQERIQELQGHMGQL-------------EQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQ 1796
Cdd:COG3096 804 asFDVQKLQRLHQAFSQFvgghlavafapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQA 883
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1797 LEEAQRDLAQRdheLETLRQEKQQTQDQEESMKLKTSALqAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRA 1876
Cdd:COG3096 884 NLLADETLADR---LEELREELDAAQEAQAFIQQHGKAL-AQLEPLVAVLQSDPEQFEQLQADYLQAKEQQRRLKQQIFA 959
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1877 LEEVLGDLRAESREHEKAVL----ALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAV 1952
Cdd:COG3096 960 LSEVVQRRPHFSYEDAVGLLgensDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELE 1039
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 1953 SQAEAL-----QEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALR-IREGEIQAQA 2022
Cdd:COG3096 1040 QELEELgvqadAEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKqEREQVVQAKA 1115
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
405-1197 |
1.12e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 54.58 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 405 DLRQQLSGCQEAMSFLQQQHdqweeegRALREKLQKLTGERDALagqTVGLQGEVDSLSRERELLQKARGELQQQLEVLE 484
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRL-------VEMARELAELNEAESDL---EQDYQAASDHLNLVQTALRQQEKIERYQADLEE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 485 QEAwRLRRMNMELQLqgdsAQGEKLEQQEELHLAVRERERLQETLV----GLEAKQSESLS---ELLTLREALESSRLEG 557
Cdd:PRK04863 360 LEE-RLEEQNEVVEE----ADEQQEENEARAEAAEEEVDELKSQLAdyqqALDVQQTRAIQyqqAVQALERAKQLCGLPD 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 558 ELLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALalDKVELNQQLLQLEQENQSLCSRVEAA 637
Cdd:PRK04863 435 LTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIA--GEVSRSEAWDVARELLRRLREQRHLA 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 638 EQLrSALQVDLAEAERRRE---ALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQL 714
Cdd:PRK04863 513 EQL-QQLRMRLSELEQRLRqqqRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQL 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 715 HQDAERQEETLARAVQEKEALVRER----AALEVRlQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQ 790
Cdd:PRK04863 592 QARIQRLAARAPAWLAAQDALARLReqsgEEFEDS-QDVTEYMQQLLERERELTVERDELAARKQALDEEIERLSQPGGS 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 791 LEVQIQTIIQ----------------------------------------AKEVIQGEVKCLKL---------ELDAERT 821
Cdd:PRK04863 671 EDPRLNALAErfggvllseiyddvsledapyfsalygparhaivvpdlsdAAEQLAGLEDCPEDlyliegdpdSFDDSVF 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 822 RAEQEWDAVARQLAQAEQE----------GQASLERQKVAHEEEVNRLQEKWEKeRSWLQQELDKTLETLER-------- 883
Cdd:PRK04863 751 SVEELEKAVVVKIADRQWRysrfpevplfGRAAREKRIEQLRAEREELAERYAT-LSFDVQKLQRLHQAFSRfigshlav 829
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 884 --------ERAELETKLREQQTEMEAIRAQREEERSQADSAlyqmqleteKERVSLLETLLRTQKELADAS--QQLERLR 953
Cdd:PRK04863 830 afeadpeaELRQLNRRRVELERALADHESQEQQQRSQLEQA---------KEGLSALNRLLPRLNLLADETlaDRVEEIR 900
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 954 QDMKIQKLKEQ--ETTGMLQAQLQETQQELKEAAQQH---RDDLAAFQKDKLDLQKQVEDLMS--QLVAH---DDSQRLV 1023
Cdd:PRK04863 901 EQLDEAEEAKRfvQQHGNALAQLEPIVSVLQSDPEQFeqlKQDYQQAQQTQRDAKQQAFALTEvvQRRAHfsyEDAAEML 980
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1024 KEE------IEEKVKVA-QECSRIQKELEKENASLAlslvEKEKRLLILQEADSVRQQELSSLRQDIQeaqegqrELGVQ 1096
Cdd:PRK04863 981 AKNsdlnekLRQRLEQAeQERTRAREQLRQAQAQLA----QYNQVLASLKSSYDAKRQMLQELKQELQ-------DLGVP 1049
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1097 VEllrqevKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLealvaeQQPENQAQAQLAS 1176
Cdd:PRK04863 1050 AD------SGAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDY------HEMREQVVNAKAG 1117
|
890 900
....*....|....*....|.
gi 189458802 1177 LCSVLQQALGSACESRPELRG 1197
Cdd:PRK04863 1118 WCAVLRLVKDNGVERRLHRRE 1138
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1383-1976 |
1.32e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1383 KNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSR 1462
Cdd:TIGR04523 31 QDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1463 EVDLqqeqiqeleqcrsvlehlpmavqeREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKK 1542
Cdd:TIGR04523 111 EIKN------------------------DKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1543 QLGTLECLALELEESHHKVESQQKMItelegqrEMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQ 1622
Cdd:TIGR04523 167 QKEELENELNLLEKEKLNIQKNIDKI-------KNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1623 EVTSQRQQIDELQKQQEQLAQALERKGQELvlqKERIQVLEDQRTLqTKILEEDLEQIKHSLRERSQELASQWqlvhera 1702
Cdd:TIGR04523 240 EINEKTTEISNTQTQLNQLKDEQNKIKKQL---SEKQKELEQNNKK-IKELEKQLNQLKSEISDLNNQKEQDW------- 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1703 ddgkspskgqrgsLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKvgetsllLTHREQETATLQQHLQEA 1782
Cdd:TIGR04523 309 -------------NKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKE-------LTNSESENSEKQRELEEK 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1783 KEqgelreqvlqgqleeaqrdlaqrdhELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRR 1862
Cdd:TIGR04523 369 QN-------------------------EIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKEL 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1863 LQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQ---EHEAEARTLQDSWLQAQATLTEQEQELAALRA 1939
Cdd:TIGR04523 424 LEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETqlkVLSRSINKIKQNLEQKQKELKSKEKELKKLNE 503
|
570 580 590
....*....|....*....|....*....|....*..
gi 189458802 1940 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSL 1976
Cdd:TIGR04523 504 EKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1773-2089 |
1.34e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 54.15 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1773 ATLQQHLQEAKEQGELREQ--VLQGQLEEAQRDLAQRD---HELETLRQE-----KQQTQDQEESMKLKTSALQAALEQ- 1841
Cdd:PRK11281 39 ADVQAQLDALNKQKLLEAEdkLVQQDLEQTLALLDKIDrqkEETEQLKQQlaqapAKLRQAQAELEALKDDNDEETRETl 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1842 AHATLKERQGELEEHREQVRRLQEEL-------------------EVEGRQVRALEevLGDLRAESREHEKAVLALQQ-- 1900
Cdd:PRK11281 119 STLSLRQLESRLAQTLDQLQNAQNDLaeynsqlvslqtqperaqaALYANSQRLQQ--IRNLLKGGKVGGKALRPSQRvl 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1901 RCAEQA--------QEHEAEARTLQDSWLQAQ-----ATLTEQEQELAALRAE-NQYSRRQEEAAVSQAEALQEALSKAQ 1966
Cdd:PRK11281 197 LQAEQAllnaqndlQRKSLEGNTQLQDLLQKQrdyltARIQRLEHQLQLLQEAiNSKRLTLSEKTVQEAQSQDEAARIQA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1967 AALQEKE--------QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI--------QAQALQHHEVTQ 2030
Cdd:PRK11281 277 NPLVAQEleinlqlsQRLLKATEKLNTLTQQNLRVKNWLDRLTQSERNIKEQISVLKGSLllsrilyqQQQALPSADLIE 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 2031 HL----------QQELCQKKEELRQL---LEKAGARRSQENGIQEKQSLEQ---ERQEetrrLLESL-KEL--QLTVA 2089
Cdd:PRK11281 357 GLadriadlrleQFEINQQRDALFQPdayIDKLEAGHKSEVTDEVRDALLQlldERRE----LLDQLnKQLnnQLNLA 430
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
243-780 |
1.55e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 243 ARLLLLVAKTQ--ALE--KEAHEKSQELMQLKSHGD--LEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILE 316
Cdd:COG4913 240 AHEALEDAREQieLLEpiRELAERYAAARERLAELEylRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 317 TNHAELMEHEASLSRNAQEEKLSLQQVIKAITQALASVEEEdtvtqssghEDSLQSDCNGLSQFDPQDPDraltlvqsVL 396
Cdd:COG4913 320 ALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERR---------RARLEALLAALGLPLPASAE--------EF 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 397 TRRQQAVQDLRQQLSGCQEAmsfLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLsreRELLQKARGEL 476
Cdd:COG4913 383 AALRAEAAALLEALEEELEA---LEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL---RDALAEALGLD 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 477 QQQLEVL--------EQEAWRlrrMNMELQLQG--------DSAQGEKLEQQEELHLAVR---ERERLQETLVGLEAKQS 537
Cdd:COG4913 457 EAELPFVgelievrpEEERWR---GAIERVLGGfaltllvpPEHYAAALRWVNRLHLRGRlvyERVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 538 ESLSELLTLREALESSRLEGELLKQ---ERVEVAAALARAEQSI-----VELSGSENSLKAEVADLRA------AAVKLG 603
Cdd:COG4913 534 DSLAGKLDFKPHPFRAWLEAELGRRfdyVCVDSPEELRRHPRAItragqVKGNGTRHEKDDRRRIRSRyvlgfdNRAKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 604 ALNE---ALALDKVELNQQLLQLEQENQSLCSRVEAAEQLR--SALQVDLAEAERRREALWEKKTQLET---QLQKAEEA 675
Cdd:COG4913 614 ALEAelaELEEELAEAEERLEALEAELDALQERREALQRLAeySWDEIDVASAEREIAELEAELERLDAssdDLAALEEQ 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 676 GAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLhqdAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQD 755
Cdd:COG4913 694 LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDEL---QDRLEAAEDLARLELRALLEERFAAALGDAVERELREN 770
|
570 580
....*....|....*....|....*
gi 189458802 756 LTEHVLGLRSAKEQLESNLFEAQQQ 780
Cdd:COG4913 771 LEERIDALRARLNRAEEELERAMRA 795
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1237-1870 |
1.60e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 1.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1237 LQKLHQDVWKARQARDDLR------DQVQKLVQRLTDTEAQKSQVhsELQDLQRQLSQSQEEKSKWEGRQNSLESELRDL 1310
Cdd:COG4913 237 LERAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAELERL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1311 HETAASLQSRLRQAELQKMEAQNDRellqasKEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTARSALKLKNEELESE 1390
Cdd:COG4913 315 EARLDALREELDELEAQIRGNGGDR------LEQLEREIERLER---ELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1391 RERAQALQEQGElkvAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR----EMQKAALELLSLDLKKRSRE--- 1463
Cdd:COG4913 386 RAEAAALLEALE---EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEAElpf 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1464 ----VDLQQEQIQELEQCRSVL-----------EHLPMA---VQEREQKLSVQRDQIREleNDREAQRSVLEHQLLdleq 1525
Cdd:COG4913 463 vgelIEVRPEEERWRGAIERVLggfaltllvppEHYAAAlrwVNRLHLRGRLVYERVRT--GLPDPERPRLDPDSL---- 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1526 kAQVIESQRGQIQD-LKKQLGtleclaleLEESHHKVESQQkmitelegqremqrvalthlTLDLEERSQELQAQSSQLH 1604
Cdd:COG4913 537 -AGKLDFKPHPFRAwLEAELG--------RRFDYVCVDSPE--------------------ELRRHPRAITRAGQVKGNG 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1605 ELENHSTHlaKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKhsL 1684
Cdd:COG4913 588 TRHEKDDR--RRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEID--V 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1685 RERSQELAsQWQLVHERADDGKSpskgqrgSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLL 1764
Cdd:COG4913 664 ASAEREIA-ELEAELERLDASSD-------DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDR 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1765 LTHREQE-----TATLQQHLQEAKEQGELRE--QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEesmklkTSALQA 1837
Cdd:COG4913 736 LEAAEDLarlelRALLEERFAAALGDAVERElrENLEERIDALRARLNRAEEELERAMRAFNREWPAE------TADLDA 809
|
650 660 670
....*....|....*....|....*....|....*..
gi 189458802 1838 ALEQAHATLKERQG----ELEEHREQVRRLQEELEVE 1870
Cdd:COG4913 810 DLESLPEYLALLDRleedGLPEYEERFKELLNENSIE 846
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1281-2095 |
1.69e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.81 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1281 DLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAE--LQKMEA----QNDRELLQASKEKLSAQVEHLQA 1354
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASdhLNLVQTalrqQEKIERYQADLEELEERLEEQNE 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1355 CVAeaqaqadaaavlEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLA-----QTLSNREREV 1429
Cdd:PRK04863 370 VVE------------EADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQAlerakQLCGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1430 ETLQAEVQELekQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEhlpmavQEREQKLSVQRDQIRELENDR 1509
Cdd:PRK04863 438 DNAEDWLEEF--QAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGE------VSRSEAWDVARELLRRLREQR 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1510 --EAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTL 1587
Cdd:PRK04863 510 hlAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLE 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1588 DLEERSQELQAQSSQLHELENHSTHlakeLQERDQEVTSQRQQIDELQKQQeqlaqaLERkgqELVLQKERIQVLEDQRT 1667
Cdd:PRK04863 590 QLQARIQRLAARAPAWLAAQDALAR----LREQSGEEFEDSQDVTEYMQQL------LER---ERELTVERDELAARKQA 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1668 LQTKIleEDLEQIKHSLRERSQELASQW--QLVHERADD---GKSPSKGQR-GSLEHlkLILRDKEKEVECQQERIQELQ 1741
Cdd:PRK04863 657 LDEEI--ERLSQPGGSEDPRLNALAERFggVLLSEIYDDvslEDAPYFSALyGPARH--AIVVPDLSDAAEQLAGLEDCP 732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1742 GHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQ----QHLQEAKEQGELREQVLqgQLEEAQRDLAQRDHELETLRQE 1817
Cdd:PRK04863 733 EDLYLIEGDPDSFDDSVFSVEELEKAVVVKIADRQwrysRFPEVPLFGRAAREKRI--EQLRAEREELAERYATLSFDVQ 810
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1818 KQQTQDQEESMKLKTSAL-------QAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESRE 1890
Cdd:PRK04863 811 KLQRLHQAFSRFIGSHLAvafeadpEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLADE 890
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1891 HekavlaLQQRCAEqAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQySRRQEEAAVSQAEALQEALSKAQAALQ 1970
Cdd:PRK04863 891 T------LADRVEE-IREQLDEAEEAKRFVQQHGNALAQLEPIVSVLQSDPE-QFEQLKQDYQQAQQTQRDAKQQAFALT 962
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1971 EKEQSLLEQA-ELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLlek 2049
Cdd:PRK04863 963 EVVQRRAHFSyEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQEL--- 1039
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 189458802 2050 agARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2095
Cdd:PRK04863 1040 --KQELQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQL 1083
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1631-1966 |
1.78e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.53 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1631 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspsk 1710
Cdd:TIGR02169 193 IDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKR------ 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1711 gqrgsLEHLKLILRDKEKEVE-CQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGElr 1789
Cdd:TIGR02169 267 -----LEEIEQLLEELNKKIKdLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE-- 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1790 eqVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEV 1869
Cdd:TIGR02169 340 --ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQR 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1870 EGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEaeartlqdswlQAQATLTEQEQELAALRAE-NQYSRRQE 1948
Cdd:TIGR02169 418 LSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE-----------QLAADLSKYEQELYDLKEEyDRVEKELS 486
|
330 340
....*....|....*....|
gi 189458802 1949 EAA--VSQAEALQEALSKAQ 1966
Cdd:TIGR02169 487 KLQreLAEAEAQARASEERV 506
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1569-1936 |
2.00e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1569 TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQeRDQEVTSQRQQIDELQKQQEQLAQALERk 1648
Cdd:PRK04863 289 LELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLN-LVQTALRQQEKIERYQADLEELEERLEE- 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1649 gQELVLQKERIQVLEDQRtlQTKILEEDLEQIKHSLRERSQEL------ASQWQLVHERADDGKSPSKGQRGSLEHLKL- 1721
Cdd:PRK04863 367 -QNEVVEEADEQQEENEA--RAEAAEEEVDELKSQLADYQQALdvqqtrAIQYQQAVQALERAKQLCGLPDLTADNAEDw 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1722 --ILRDKEKEVECQ----QERIQELQGHMGQLEQQLQGLHRKVGETSlllthREQETATLQQHLQEAKEQGELREQV--L 1793
Cdd:PRK04863 444 leEFQAKEQEATEEllslEQKLSVAQAAHSQFEQAYQLVRKIAGEVS-----RSEAWDVARELLRRLREQRHLAEQLqqL 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1794 QGQLEEAQRDLAQRdHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQ 1873
Cdd:PRK04863 519 RMRLSELEQRLRQQ-QRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQR 597
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 1874 VRALEEV---LGDLRAESREHEKAVLALQQRCAEQAQ---EHEAEARTLQDSWLQAQATLTEQEQELAA 1936
Cdd:PRK04863 598 LAARAPAwlaAQDALARLREQSGEEFEDSQDVTEYMQqllERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1781-2294 |
2.16e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1781 EAKEQGELREQvlqgqLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSA----------LQAALEQAHATLKERQ 1850
Cdd:PRK02224 197 EEKEEKDLHER-----LNGLESELAELDEEIERYEEQREQARETRDEADEVLEEheerreeletLEAEIEDLRETIAETE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1851 GELEEHREQVRRLQEEL-EVEGRQVRALEEV-LGDLRAESREHEKAVLALQ--------QRCAEQAQEHEAEARTLQDSW 1920
Cdd:PRK02224 272 REREELAEEVRDLRERLeELEEERDDLLAEAgLDDADAEAVEARREELEDRdeelrdrlEECRVAAQAHNEEAESLREDA 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1921 LQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTC 2000
Cdd:PRK02224 352 DDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2001 QASARQLEEalRIREGEIQAQALQHHEVTQHLQ--------QELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQE 2072
Cdd:PRK02224 432 EATLRTARE--RVEEAEALLEAGKCPECGQPVEgsphvetiEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAED 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2073 ETRRLLESLKELQLTVAQREEEILMLRE-ASSPRHRAlpaekpalQPLPAQQELERLQTALRQTEAREIewREKAQDLAL 2151
Cdd:PRK02224 510 RIERLEERREDLEELIAERRETIEEKRErAEELRERA--------AELEAEAEEKREAAAEAEEEAEEA--REEVAELNS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2152 SLAQSKASISSLQEITMfLQASVLERESEQQRLQEElvlsRQALEEQQSggphstsradqgpkvgqgsqsgevetepspg 2231
Cdd:PRK02224 580 KLAELKERIESLERIRT-LLAAIADAEDEIERLREK----REALAELND------------------------------- 623
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 2232 vEEKERLTQRLERLQQAVAELEVDR-SKLQCHNAQLRTALEQVERERRKL--KRDSVRaSRAGSLE 2294
Cdd:PRK02224 624 -ERRERLAEKRERKRELEAEFDEARiEEAREDKERAEEYLEQVEEKLDELreERDDLQ-AEIGAVE 687
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
245-492 |
2.25e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 245 LLLLVAKTQALEKEAHEKSQELMQLKSHGDLEKAELQDRVTELSALLTQSQKQNE---DYEKMVKALRETMEILETNHAE 321
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 322 LMEHEASLSRNAQEEKLSLQQVIKAItqalasveeedtvtQSSGHEDSLQSdcnGLSQFDPQDPDRALTLVQSVLTRRQQ 401
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRAL--------------YRLGRQPPLAL---LLSPEDFLDAVRRLQYLKYLAPARRE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 402 AVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLE 481
Cdd:COG4942 151 QAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
250
....*....|.
gi 189458802 482 VLEQEAWRLRR 492
Cdd:COG4942 231 RLEAEAAAAAE 241
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
921-1451 |
3.02e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.00 E-value: 3.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 921 QLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTgmlQAQLQETQQELKEAAQQHRDDLAAFQKDKL 1000
Cdd:COG4913 243 ALEDAREQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRR---LELLEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1001 DLQKQVEDLMSQLVAHDDSQR-LVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSL 1079
Cdd:COG4913 320 ALREELDELEAQIRGNGGDRLeQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1080 RQDIQEAQegqRELGVQVELLRQEVKEKEADFV----------AREAQLLEEL-EASRVAEQQLR-----------ASLW 1137
Cdd:COG4913 400 LEALEEAL---AEAEAALRDLRRELRELEAEIAslerrksnipARLLALRDALaEALGLDEAELPfvgelievrpeEERW 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1138 -------------------AQEAKAT----QLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSV--------LQQALG 1186
Cdd:COG4913 477 rgaiervlggfaltllvppEHYAAALrwvnRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELG 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1187 SA-----CESRPELRGGGDS---------APTLWgpdpDQNGASRLFKRWSLptalspeavalalqklhqdVWKARQARD 1252
Cdd:COG4913 557 RRfdyvcVDSPEELRRHPRAitragqvkgNGTRH----EKDDRRRIRSRYVL-------------------GFDNRAKLA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1253 DLRDQVQKLVQRLTDTEAQksqvhseLQDLQRQLSQSQEEKSKWEGRQNSLESELRdlhetAASLQSRLRQAELQKMEAQ 1332
Cdd:COG4913 614 ALEAELAELEEELAEAEER-------LEALEAELDALQERREALQRLAEYSWDEID-----VASAEREIAELEAELERLD 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1333 NDRELLQASKEKLSAQVEHLQACVAEAqaqadaaavleEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQ 1412
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEEL-----------DELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL 750
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 189458802 1413 ENLALLAQTLSNREREV-ETLQAEVQELEKQREMQKAALE 1451
Cdd:COG4913 751 LEERFAAALGDAVERELrENLEERIDALRARLNRAEEELE 790
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
276-917 |
3.04e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 52.92 E-value: 3.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 276 EKAELQDRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQEEKLSLQQVIKAITQALASVE 355
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDR 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 356 EE----------------DTVTQSSGHEDSLQSDCNGLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSF 419
Cdd:pfam12128 322 SElealedqhgafldadiETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAK 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 420 LQQQHDQWEEEGRALREKLQkltgerdalagqtvglqgevdslsrerellQKARGELQQQLEVLEQEAWRLRRMNMELQL 499
Cdd:pfam12128 402 IREARDRQLAVAEDDLQALE------------------------------SELREQLEAGKLEFNEEEYRLKSRLGELKL 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 500 QGDSAQGEKlEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVAAALARAEQSIV 579
Cdd:pfam12128 452 RLNQATATP-ELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLF 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 580 ELSGS-ENSLKAEVADLRAAAVKLGALNEALALDKV-ELNQQLLQLEQENQSLCSRVEaaeqlrsalQVDLAEAERRREA 657
Cdd:pfam12128 531 PQAGTlLHFLRKEAPDWEQSIGKVISPELLHRTDLDpEVWDGSVGGELNLYGVKLDLK---------RIDVPEWAASEEE 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 658 LWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDAERQEETLARAVQEKEALVR 737
Cdd:pfam12128 602 LRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSAN 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 738 ER-AALEVRLQAVERDRQDLTEHVLGlrsakEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLEL 816
Cdd:pfam12128 682 ERlNSLEAQLKQLDKKHQAWLEEQKE-----QKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWY 756
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 817 DAERTRAEQEWDAVARqLAQAEQEGQASLERQKVaHEEEVNR----LQEKWEKERswlqQELDKTLETLERERAELETKL 892
Cdd:pfam12128 757 KRDLASLGVDPDVIAK-LKREIRTLERKIERIAV-RRQEVLRyfdwYQETWLQRR----PRLATQLSNIERAISELQQQL 830
|
650 660
....*....|....*....|....*
gi 189458802 893 REQQTEMEAIRAQREEERSQADSAL 917
Cdd:pfam12128 831 ARLIADTKLRRAKLEMERKASEKQQ 855
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
786-1135 |
3.34e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.43 E-value: 3.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 786 VTKGQLEVQIQTIIQAKEVIQGEVKCLKLE-LDAERTRAEQEWDAVA----RQLAQAEQEGQASLERQKVAHEEEVNRLQ 860
Cdd:pfam17380 265 MTENEFLNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREverrRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 861 EKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEE-RSQADSALYQMQLETEKERvslleTLLRTQ 939
Cdd:pfam17380 345 ERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERvRQELEAARKVKILEEERQR-----KIQQQK 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 940 KELADASQQLERLRQDmKIQKLKEQETTGMLQAQLQEtqQELKEAAQQHRDDLAAFQKDKLDLQKQVEDlmsQLVAHDDS 1019
Cdd:pfam17380 420 VEMEQIRAEQEEARQR-EVRRLEEERAREMERVRLEE--QERQQQVERLRQQEEERKRKKLELEKEKRD---RKRAEEQR 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1020 QRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRllilQEADSVRQQElsslrqdiQEAQEGQRelgVQVEL 1099
Cdd:pfam17380 494 RKILEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERR----REAEEERRKQ--------QEMEERRR---IQEQM 558
|
330 340 350
....*....|....*....|....*....|....*.
gi 189458802 1100 LRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAS 1135
Cdd:pfam17380 559 RKATEERSRLEAMEREREMMRQIVESEKARAEYEAT 594
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
648-1003 |
3.46e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.65 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 648 LAEAERRREALwEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLeQLHQDAERQEETLAR 727
Cdd:COG3096 274 MRHANERRELS-ERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHL-NLVQTALRQQEKIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 728 AVQEKEAL-VRERAALEVRLQAVERdRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQ 806
Cdd:COG3096 352 YQEDLEELtERLEEQEEVVEEAAEQ-LAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARALCG 430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 807 G---EVKCLKLELDAERTRaEQEWDAVARQLAQAEQEGQASLERQKVAHE------EEVNRlQEKWEKERSWL-----QQ 872
Cdd:COG3096 431 LpdlTPENAEDYLAAFRAK-EQQATEEVLELEQKLSVADAARRQFEKAYElvckiaGEVER-SQAWQTARELLrryrsQQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 873 ELDKTLETLERERAELETKLREQQtemEAIR-----AQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQ 947
Cdd:COG3096 509 ALAQRLQQLRAQLAELEQRLRQQQ---NAERlleefCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQ 585
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 948 QLERLRQDMK---------------IQKLKEQ-----ETTGMLQAQLQETQQELKEaAQQHRDDLAAfQKDKLDLQ 1003
Cdd:COG3096 586 QLEQLRARIKelaarapawlaaqdaLERLREQsgealADSQEVTAAMQQLLERERE-ATVERDELAA-RKQALESQ 659
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1590-2283 |
4.20e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.38 E-value: 4.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1590 EERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVlqkERIQVLEDQRTLQ 1669
Cdd:TIGR02169 205 REREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLE---EIEQLLEELNKKI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1670 TKILEEDLEQIKHSLRERSQELASQwqlvheraddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQ 1749
Cdd:TIGR02169 282 KDLGEEEQLRVKEKIGELEAEIASL------------------ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELER 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1750 QLQGLHRKVGETSLLLTHREQETATLQQHLQE-AKEQGELREQV--LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEE 1826
Cdd:TIGR02169 344 EIEEERKRRDKLTEEYAELKEELEDLRAELEEvDKEFAETRDELkdYREKLEKLKREINELKRELDRLQEELQRLSEELA 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1827 SMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDL--RAESREHEKAVLALQQRCAE 1904
Cdd:TIGR02169 424 DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVekELSKLQRELAEAEAQARASE 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1905 QAQEHEAEARTLQDSWLQAQATLTEQeqelaALRAENQYSRRQEEAAVSQAEALQ-EALSKAQAALQekeqsLLEQAELS 1983
Cdd:TIGR02169 504 ERVRGGRAVEEVLKASIQGVHGTVAQ-----LGSVGERYATAIEVAAGNRLNNVVvEDDAVAKEAIE-----LLKRRKAG 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1984 HTLEASTAALQATLDTCQASARQ--LEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELR----------QLLEKAG 2051
Cdd:TIGR02169 574 RATFLPLNKMRDERRDLSILSEDgvIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMgkyrmvtlegELFEKSG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2052 A--------RRSQENGIQEKQSLEQ--ERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPLPA 2121
Cdd:TIGR02169 654 AmtggsrapRGGILFSRSEPAELQRlrERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2122 Q--QELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQAS-----VLERESEQQRLQEELVLSRQA 2194
Cdd:TIGR02169 734 KlkERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARlshsrIPEIQAELSKLEEEVSRIEAR 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2195 LEEQQSGGPHSTSRADQGPKVGQGSQSGEVETEpspgvEEKERLTQRLERLQQAVAELEVDRSKLQCHNAQLRTALEQVE 2274
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK-----EQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLK 888
|
....*....
gi 189458802 2275 RERRKLKRD 2283
Cdd:TIGR02169 889 KERDELEAQ 897
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
632-851 |
5.48e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 5.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 632 SRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHL 711
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 712 EQLHQDAERQEETLARAVQEKEALV----RERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVT 787
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 788 KGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAE---QEWDAVARQLAQAEQEGQASLERQKVA 851
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAelqQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
276-772 |
5.72e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.96 E-value: 5.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 276 EKAELQDRVTELSALLTQSQKQNEDYEK--------------MVKALRETMEILETNHAELMEHEASLSrNAQEEKLSLQ 341
Cdd:PRK02224 200 EEKDLHERLNGLESELAELDEEIERYEEqreqaretrdeadeVLEEHEERREELETLEAEIEDLRETIA-ETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 342 QVIKAITQALASVEEEDTVTQSSGHEDSLQSDCNGLSQfdpQDPDRALTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQ 421
Cdd:PRK02224 279 EEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR---EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 422 QQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEQEAWRLRRMNMELQLQG 501
Cdd:PRK02224 356 ERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 502 DSAQgEKLEQQEELHLAVR----------------------ERERLQETLVGLEAKQSESLSELLTLREALESSRlEGEL 559
Cdd:PRK02224 436 RTAR-ERVEEAEALLEAGKcpecgqpvegsphvetieedreRVEELEAELEDLEEEVEEVEERLERAEDLVEAED-RIER 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 560 LKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQ 639
Cdd:PRK02224 514 LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLER 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 640 LRSaLQVDLAEAERRREALWEKKTQLetqlqkaeeagAELQAELRGTREEKEELKDKLSEAHHQqetatAHLEQLHQDAE 719
Cdd:PRK02224 594 IRT-LLAAIADAEDEIERLREKREAL-----------AELNDERRERLAEKRERKRELEAEFDE-----ARIEEAREDKE 656
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 189458802 720 RQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTEhvlgLRSAKEQLES 772
Cdd:PRK02224 657 RAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE----LRERREALEN 705
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
1560-1867 |
6.06e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 51.75 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1560 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1639
Cdd:pfam10174 241 KISSLERNIRDLEDEVQMLKTNGLLHTEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNS 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1640 QLAQALERKGQELVLQKERiqvledqrtlqTKILEEDLEQIKHSLRERSQELASQWQLVHERADDgkspSKGQRGSLEHL 1719
Cdd:pfam10174 321 DCKQHIEVLKESLTAKEQR-----------AAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEE----KSTLAGEIRDL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1720 KLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEA-------KEQGELREQV 1792
Cdd:pfam10174 386 KDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKeriierlKEQREREDRE 465
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1793 LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEEL 1867
Cdd:pfam10174 466 RLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQL 540
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
739-1177 |
6.19e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 6.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 739 RAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLK----- 813
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEkllql 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 814 LELDAERTRAEQEWDAVARQLAQAEQEGQ--ASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETK 891
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEelRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 892 LREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQ 971
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 972 AQLQETQQELKEAAQQHRDDLAAFQKDKLdlqkQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASL 1051
Cdd:COG4717 288 LLFLLLAREKASLGKEAEELQALPALEEL----EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1052 ALSLVEKEKRLLiLQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAR-EAQLLEELEASRVAEQ 1130
Cdd:COG4717 364 QLEELEQEIAAL-LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALdEEELEEELEELEEELE 442
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 189458802 1131 QLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQpENQAQAQLASL 1177
Cdd:COG4717 443 ELEEELEELREELAELEAELEQLEEDGELAELLQE-LEELKAELREL 488
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1857-2136 |
7.31e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1857 REQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRcaeqaqeheAEARTLQDSWLQAQATLTEQEQELAA 1936
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL---------AEYSWDEIDVASAEREIAELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1937 LRAENQYSRRQEEaAVSQAEALQEALSKAQAALQEKEQSL-LEQAELSHTLEASTAALQATLDTCQASARQLEEALRIRE 2015
Cdd:COG4913 680 LDASSDDLAALEE-QLEELEAELEELEEELDELKGEIGRLeKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAA 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2016 GEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLtvAQREEEI 2095
Cdd:COG4913 759 LGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDGL--PEYEERF 836
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 189458802 2096 LMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTE 2136
Cdd:COG4913 837 KELLNENSIEFVADLLSKLRRAIREIKERIDPLNDSLKRIP 877
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
393-610 |
7.76e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.92 E-value: 7.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 393 QSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKA 472
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 473 RGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALES 552
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 553 SRLEgelLKQERVEVAAALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALA 610
Cdd:COG4942 179 LLAE---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1762-1981 |
9.08e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 9.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1762 SLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ 1841
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1842 AHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQdswl 1921
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA---- 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1922 QAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAE 1981
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAE 223
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
634-1106 |
1.18e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.88 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 634 VEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEelkDKLSEAHHQQETATAHLEQ 713
Cdd:pfam05483 196 ILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKE---NKMKDLTFLLEESRDKANQ 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 714 LHQDAERQEETLARAVQEKEALVRERAALEVRLQ-------AVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVI-- 784
Cdd:pfam05483 273 LEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQrsmstqkALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVvt 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 785 --QVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEeevNRLQEK 862
Cdd:pfam05483 353 efEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDE---KKQFEK 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 863 WEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQkEL 942
Cdd:pfam05483 430 IAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQ-EA 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 943 ADASQQLERLRQDMKIQKLKE----------QETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQ 1012
Cdd:pfam05483 509 SDMTLELKKHQEDIINCKKQEermlkqienlEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQ 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1013 LVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEK----ENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQE 1088
Cdd:pfam05483 589 MKILENKCNNLKKQIENKNKNIEELHQENKALKKkgsaENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKI 668
|
490
....*....|....*...
gi 189458802 1089 GQRELGVQVELLRQEVKE 1106
Cdd:pfam05483 669 SEEKLLEEVEKAKAIADE 686
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1588-2154 |
1.23e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1588 DLEERSQELQAQSSQLHEL-ENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQR 1666
Cdd:COG4913 239 RAHEALEDAREQIELLEPIrELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1667 TLqtkiLEEDLEQIKHSLRErsqelasqwqlvheraddgkspSKGQRgsLEHLklilrdkEKEVECQQERIQELQGHMGQ 1746
Cdd:COG4913 319 DA----LREELDELEAQIRG----------------------NGGDR--LEQL-------EREIERLERELEERERRRAR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1747 LEQQLQGLHRKVGETslllthrEQETATLQQHLQEAKEQgelreqvLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEE 1826
Cdd:COG4913 364 LEALLAALGLPLPAS-------AEEFAALRAEAAALLEA-------LEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1827 SMKLKTSALQAALEQAHATLKErqgELEEHREQVRRLQEELEVEGRQVR---ALEEVLGDLRAE---SREHEKAVLA--- 1897
Cdd:COG4913 430 SLERRKSNIPARLLALRDALAE---ALGLDEAELPFVGELIEVRPEEERwrgAIERVLGGFALTllvPPEHYAAALRwvn 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1898 -------LQQRCAEQAQEHEAEARTLQDS--------------WLQAQ----------ATLTEQEQELAALRAENQYS-- 1944
Cdd:COG4913 507 rlhlrgrLVYERVRTGLPDPERPRLDPDSlagkldfkphpfraWLEAElgrrfdyvcvDSPEELRRHPRAITRAGQVKgn 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1945 ----------------------RRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTcqa 2002
Cdd:COG4913 587 gtrhekddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDV--- 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2003 saRQLEEALRIREGEIQAQALQHHEVTQhLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLK 2082
Cdd:COG4913 664 --ASAEREIAELEAELERLDASSDDLAA-LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAE 740
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189458802 2083 ELQlTVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAR-EIEWREKAQDLALSLA 2154
Cdd:COG4913 741 DLA-RLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLE 812
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1425-2095 |
1.25e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1425 REREVETLQAEV-QELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIR 1503
Cdd:TIGR02169 185 NIERLDLIIDEKrQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1504 ELENDREAQRSVLEHQLLDLEQKAQV------------IESQRGQIQDLKKQLGTLECLALELEESHHKVESQqkmITEL 1571
Cdd:TIGR02169 265 KRLEEIEQLLEELNKKIKDLGEEEQLrvkekigeleaeIASLERSIAEKERELEDAEERLAKLEAEIDKLLAE---IEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1572 EGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQE 1651
Cdd:TIGR02169 342 EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1652 LVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQeLASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVE 1731
Cdd:TIGR02169 422 LADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQ-LAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1732 CQQERIQELQGHMGQLEQQLQGLHRKVGE----------------------------------------------TSLLL 1765
Cdd:TIGR02169 501 ASEERVRGGRAVEEVLKASIQGVHGTVAQlgsvgeryataievaagnrlnnvvveddavakeaiellkrrkagraTFLPL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1766 THREQETATLQ-----------------------------------QHLQEAKEQ-GELREQVLQGQLEE---------- 1799
Cdd:TIGR02169 581 NKMRDERRDLSilsedgvigfavdlvefdpkyepafkyvfgdtlvvEDIEAARRLmGKYRMVTLEGELFEksgamtggsr 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1800 ----------AQRDLAQR-DHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1868
Cdd:TIGR02169 661 aprggilfsrSEPAELQRlRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLE 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1869 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAE-QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQ 1947
Cdd:TIGR02169 741 ELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKlEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQK 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1948 EEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI---QAQALQ 2024
Cdd:TIGR02169 821 LNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERdelEAQLRE 900
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189458802 2025 HHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETrrllESLKELQLTVAQREEEI 2095
Cdd:TIGR02169 901 LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE----LSLEDVQAELQRVEEEI 967
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
937-1176 |
1.45e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 937 RTQKELADASQQLERLRQDMKIQKLKEQEttgmLQAQLQETQQELKEAAQQhrddLAAFQKDKLDLQKQVEDLMSQLVAH 1016
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKA----LLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1017 DDSQRLVKEEIEEKVKVAQECSRIQKELEKENASlalSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQ 1096
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPE---DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1097 VELLRQEVKEKEadfvareaQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLAS 1176
Cdd:COG4942 173 RAELEALLAELE--------EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1578-2301 |
1.56e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.72 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1578 QRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQ------ERDQEVTSQRQQIDELQKQQEQLAQALERKGQE 1651
Cdd:COG3096 290 LRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQaasdhlNLVQTALRQQEKIERYQEDLEELTERLEEQEEV 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1652 LVLQKERIQVLEDQRTLQtkilEEDLEQIKHSLRERSQEL------ASQWQLVHERADDGKS----PSKGQRGSLEHLkL 1721
Cdd:COG3096 370 VEEAAEQLAEAEARLEAA----EEEVDSLKSQLADYQQALdvqqtrAIQYQQAVQALEKARAlcglPDLTPENAEDYL-A 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1722 ILRDKEKEVECQ----QERIQELQGHMGQLEQQLQGLHRKVGETSlllthREQETATLQQHLQEAKEQGEL--REQVLQG 1795
Cdd:COG3096 445 AFRAKEQQATEEvlelEQKLSVADAARRQFEKAYELVCKIAGEVE-----RSQAWQTARELLRRYRSQQALaqRLQQLRA 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1796 QLEEAQRDLAQRdHELETLRQEKQQTQDQE-------ESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1868
Cdd:COG3096 520 QLAELEQRLRQQ-QNAERLLEEFCQRIGQQldaaeelEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELA 598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1869 VEGRQVRALEEVLGDLRAESREHEKAVLALQQrCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAenqysrrqe 1948
Cdd:COG3096 599 ARAPAWLAAQDALERLREQSGEALADSQEVTA-AMQQLLEREREATVERDELAARKQALESQIERLSQPGG--------- 668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1949 eAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALqaTLDTCQASARQLE------EALRIREGEIQAQA 2022
Cdd:COG3096 669 -AEDPRLLALAERLGGVLLSEIYDDVTLEDAPYFSALYGPARHAI--VVPDLSAVKEQLAgledcpEDLYLIEGDPDSFD 745
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2023 LQHHEVTQhLQQELCQKKEElRQLL------EKAGARRSQENGIQEkqsLEQERQEETRRLLESLKELQLTvaQREEEIL 2096
Cdd:COG3096 746 DSVFDAEE-LEDAVVVKLSD-RQWRysrfpeVPLFGRAAREKRLEE---LRAERDELAEQYAKASFDVQKL--QRLHQAF 818
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2097 mlrEASSPRHRALpaekpALQPLPAQqELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEitMFLQASVLE 2176
Cdd:COG3096 819 ---SQFVGGHLAV-----AFAPDPEA-ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNK--LLPQANLLA 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2177 RESEQQR---LQEELVLSRQALEEQQSGGPHSTSRADQGPKVGQGSQSGE-VETEPSPGVEEKERLTQRLERLQQAVAEL 2252
Cdd:COG3096 888 DETLADRleeLREELDAAQEAQAFIQQHGKALAQLEPLVAVLQSDPEQFEqLQADYLQAKEQQRRLKQQIFALSEVVQRR 967
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 2253 E----VDRSKLQCHNA----QLRTALEQVERERRKLkRDSVRASRAGSLEARETMTS 2301
Cdd:COG3096 968 PhfsyEDAVGLLGENSdlneKLRARLEQAEEARREA-REQLRQAQAQYSQYNQVLAS 1023
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
639-1106 |
2.33e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 639 QLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQDa 718
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 719 ERQEETLARAVQEKEALVREraaLEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVI----QVTKGQLEVQ 794
Cdd:TIGR04523 196 LLKLELLLSNLKKKIQKNKS---LESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLkdeqNKIKKQLSEK 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 795 IQTIIQAKEVI---QGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQE---KWEKERS 868
Cdd:TIGR04523 273 QKELEQNNKKIkelEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEqisQLKKELT 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 869 WLQQELDKTLETLERERAELETKLREQQTEMEAIRA-------------QREEERSQADSALYQMQLET---EKERVSLL 932
Cdd:TIGR04523 353 NSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNlesqindleskiqNQEKLNQQKDEQIKKLQQEKellEKEIERLK 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 933 ETLLRTQKELADASQQ----------LERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQhrddLAAFQKDKLDL 1002
Cdd:TIGR04523 433 ETIIKNNSEIKDLTNQdsvkeliiknLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKE----LKKLNEEKKEL 508
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1003 QKQVEDLMSQLVAHDDSQRLVKEEIEEKvkvAQECSRIQKELEKENASLALSLVEKEKRLLilqeadsvrQQELSSLRQD 1082
Cdd:TIGR04523 509 EEKVKDLTKKISSLKEKIEKLESEKKEK---ESKISDLEDELNKDDFELKKENLEKEIDEK---------NKEIEELKQT 576
|
490 500
....*....|....*....|....
gi 189458802 1083 IQEAQEGQRELGVQVELLRQEVKE 1106
Cdd:TIGR04523 577 QKSLKKKQEEKQELIDQKEKEKKD 600
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
815-937 |
2.36e-05 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 49.69 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 815 ELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ--QELDKTLETLERERAELETKL 892
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEeiQELKEELEQRYGKIPELEKEL 494
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 893 REQQTEMEAIRAQREEERSQADSA----------LYQMqLETEKERVSLLETLLR 937
Cdd:COG0542 495 AELEEELAELAPLLREEVTEEDIAevvsrwtgipVGKL-LEGEREKLLNLEEELH 548
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
636-959 |
2.40e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 49.95 E-value: 2.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 636 AAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGT------REEKEELKDKL-------SEAHH 702
Cdd:COG3096 296 GARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQekieryQEDLEELTERLeeqeevvEEAAE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 703 QQETATAHLEQLHQDAERQEETLA-----------RAVQEKEALVRERAAlEVRLQAVERDRQDLTEHVLGLRSAKEQLE 771
Cdd:COG3096 376 QLAEAEARLEAAEEEVDSLKSQLAdyqqaldvqqtRAIQYQQAVQALEKA-RALCGLPDLTPENAEDYLAAFRAKEQQAT 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 772 SNLFEAQQQNSVIQVTKGQLEVQIQTIIQ-AKEVIQGEV----KCLKLELDAERTRAEQEwDAVARQLAQAEQEgqasLE 846
Cdd:COG3096 455 EEVLELEQKLSVADAARRQFEKAYELVCKiAGEVERSQAwqtaRELLRRYRSQQALAQRL-QQLRAQLAELEQR----LR 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 847 RQKVAhEEEVNRLQEKWEKERSW------LQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQA------D 914
Cdd:COG3096 530 QQQNA-ERLLEEFCQRIGQQLDAaeeleeLLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARApawlaaQ 608
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 189458802 915 SALYQMQ------LETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQ 959
Cdd:COG3096 609 DALERLReqsgeaLADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
846-1443 |
2.70e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 846 ERQKVAHEEEVNRLQEKWEKERSWLQQELDKtLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETE 925
Cdd:pfam12128 229 DIQAIAGIMKIRPEFTKLQQEFNTLESAELR-LSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELN 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 926 KERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1005
Cdd:pfam12128 308 GELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQ 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1006 VEDLMSQLVAHDDSQRlvkeeiEEKVKVAQECSRIQKELEKEnasLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQE 1085
Cdd:pfam12128 388 NNRDIAGIKDKLAKIR------EARDRQLAVAEDDLQALESE---LREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1086 AQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRAsLWAQEAKATQLQLQLRSTESQLEAlvaeqq 1165
Cdd:pfam12128 459 TPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEA-LRQASRRLEERQSALDELELQLFP------ 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1166 PENQAQAQLASLCSVLQQALGSACEsrPELRGGGDSAPTLWGPDPDQnGASRLFKRWSLPTALSPEAVALAlQKLHQDVW 1245
Cdd:pfam12128 532 QAGTLLHFLRKEAPDWEQSIGKVIS--PELLHRTDLDPEVWDGSVGG-ELNLYGVKLDLKRIDVPEWAASE-EELRERLD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1246 KARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESEL-RDLHETAASLQSRLRQA 1324
Cdd:pfam12128 608 KAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKnKALAERKDSANERLNSL 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1325 ELQKmeAQNDRELLQASKEKLSAQVEHlqacvaeAQAQADAAAVLEEDLRTARSALKlknEELESERERAQALQEQGELK 1404
Cdd:pfam12128 688 EAQL--KQLDKKHQAWLEEQKEQKREA-------RTEKQAYWQVVEGALDAQLALLK---AAIAARRSGAKAELKALETW 755
|
570 580 590
....*....|....*....|....*....|....*....
gi 189458802 1405 VAQGKAlqeNLALLAQTLSNREREVETLQAEVQELEKQR 1443
Cdd:pfam12128 756 YKRDLA---SLGVDPDVIAKLKREIRTLERKIERIAVRR 791
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
846-1134 |
3.01e-05 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 48.76 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 846 ERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREE----ERSQADSALYQMQ 921
Cdd:pfam13868 32 KRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEeklqEREQMDEIVERIQ 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 922 LETEKERVSLLETLLRTQKELADASQQLERLRQDMKIQKLKE-------QETTGMLQAQLQETQQELKEAAQQHRDDLAA 994
Cdd:pfam13868 112 EEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEderileyLKEKAEREEEREAEREEIEEEKEREIARLRA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 995 FQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLliLQEADSVRQQ 1074
Cdd:pfam13868 192 QQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAERE--EEEFERMLRK 269
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1075 ELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRA 1134
Cdd:pfam13868 270 QAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEAERRE 329
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1559-2279 |
3.70e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 3.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1559 HKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHEL--------ENHSTHLAKELQERDQEVTSQRQQ 1630
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkikdlgEEEQLRVKEKIGELEAEIASLERS 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1631 IDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTlQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSK 1710
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIE-EERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1711 GQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE 1790
Cdd:TIGR02169 389 DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1791 Q---VLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVR-----R 1862
Cdd:TIGR02169 469 QelyDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvaagnR 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1863 LQ----EELEVEGRQVRALEEV---------LGDLRAESRE----HEKAVL-----------------------ALQQRC 1902
Cdd:TIGR02169 549 LNnvvvEDDAVAKEAIELLKRRkagratflpLNKMRDERRDlsilSEDGVIgfavdlvefdpkyepafkyvfgdTLVVED 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1903 AEQAQEHEAEAR--TLQDSWLQAQATLT-------EQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1973
Cdd:TIGR02169 629 IEAARRLMGKYRmvTLEGELFEKSGAMTggsraprGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1974 QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQqELCQKKEELRQLLEKAGAR 2053
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIE-ELEEDLHKLEEALNDLEAR 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2054 RSQEnGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKpaLQPLPAQQELERLQTALR 2133
Cdd:TIGR02169 788 LSHS-RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK--EQIKSIEKEIENLNGKKE 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2134 QTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQSggphstSRADQGP 2213
Cdd:TIGR02169 865 ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEE------ELSEIED 938
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2214 KVGQGSQSGEVETEPSPGVEEKERLTQRLERL--------------QQAVAELEVDRSKLQCHNAQLRTALEQVERERRK 2279
Cdd:TIGR02169 939 PKGEDEEIPEEELSLEDVQAELQRVEEEIRALepvnmlaiqeyeevLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| MutS2 |
COG1193 |
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair]; |
843-983 |
4.25e-05 |
|
dsDNA-specific endonuclease/ATPase MutS2 [Replication, recombination and repair];
Pssm-ID: 440806 [Multi-domain] Cd Length: 784 Bit Score: 48.98 E-value: 4.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 843 ASLERQKVAHEEEvnrlqekwekerswlqqeldktLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQL 922
Cdd:COG1193 521 EELERERRELEEE----------------------REEAERLREELEKLREELEEKLEELEEEKEEILEKAREEAEEILR 578
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189458802 923 ETEKErvslLETLLRTQKELADASQQLERLRQDMK--IQKLKEQETTGMLQAQLQETQQELKE 983
Cdd:COG1193 579 EARKE----AEELIRELREAQAEEEELKEARKKLEelKQELEEKLEKPKKKAKPAKPPEELKV 637
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1858-2399 |
4.26e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.07 E-value: 4.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1858 EQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTeqeQELAAL 1937
Cdd:pfam12128 237 MKIRPEFTKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELN---GELSAA 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1938 RAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLleQAELShtleastaALQATLDTCQASARQLEEALRIREge 2017
Cdd:pfam12128 314 DAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSW--QSELE--------NLEERLKALTGKHQDVTAKYNRRR-- 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2018 iQAQALQHHEVTQHLQQELCQKKEEL-RQLLEKAGARRSQENGIQEK-QSLEQERQEETRRLLESLKEL--QLTVAQREE 2093
Cdd:pfam12128 382 -SKIKEQNNRDIAGIKDKLAKIREARdRQLAVAEDDLQALESELREQlEAGKLEFNEEEYRLKSRLGELklRLNQATATP 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2094 EILMLREASSPRHRALPAEKPAlqplpAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQAS 2173
Cdd:pfam12128 461 ELLLQLENFDERIERAREEQEA-----ANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGT 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2174 VLEreseqqrlqeelVLSRQALEEQQSGG----PHSTSRADQGPKVGQGSQSGE------------VETEPSPGVEE--K 2235
Cdd:pfam12128 536 LLH------------FLRKEAPDWEQSIGkvisPELLHRTDLDPEVWDGSVGGElnlygvkldlkrIDVPEWAASEEelR 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2236 ERLTQRLERLQQAVAELEVDRSKLQCHNAQLRTALEQVERERRKLKRDSVRASRAGSLEARETMTsspTQQDGRGSQRGS 2315
Cdd:pfam12128 604 ERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKDSA 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2316 SDSVLVVELQREVALLRAQLALERKQRQDYIARS--VQTSRELAGLHHSLSHSLLTvAQAPEATVLEAETRKLDESLNQS 2393
Cdd:pfam12128 681 NERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTekQAYWQVVEGALDAQLALLKA-AIAARRSGAKAELKALETWYKRD 759
|
....*.
gi 189458802 2394 LTSPGP 2399
Cdd:pfam12128 760 LASLGV 765
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1904-2200 |
5.00e-05 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 48.75 E-value: 5.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1904 EQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEaLQEALSKAQAALQEKEQSLLEQAELS 1983
Cdd:PRK11281 73 DKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQ-LESRLAQTLDQLQNAQNDLAEYNSQL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1984 HTLEASTAALQATLDTCQASARQLEEALriREGEIQAQALQHHEVTQHL--QQELCQKKEELRQLLEkagarrsqenGIQ 2061
Cdd:PRK11281 152 VSLQTQPERAQAALYANSQRLQQIRNLL--KGGKVGGKALRPSQRVLLQaeQALLNAQNDLQRKSLE----------GNT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2062 EKQSLEQERQEetrrlleslkELQLTVAQREEEILMLREASSPRHRALpAEKPAlqplpaqQELERLQTALRQTEAREIe 2141
Cdd:PRK11281 220 QLQDLLQKQRD----------YLTARIQRLEHQLQLLQEAINSKRLTL-SEKTV-------QEAQSQDEAARIQANPLV- 280
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189458802 2142 wrekAQDLALSLAQSKASISSLQEITMFLQAS-----VLERESEQQR--------LQEELVLSRQALEEQQS 2200
Cdd:PRK11281 281 ----AQELEINLQLSQRLLKATEKLNTLTQQNlrvknWLDRLTQSERnikeqisvLKGSLLLSRILYQQQQA 348
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
742-987 |
5.02e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 48.86 E-value: 5.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 742 LEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQvtkgqLEVQIQTIIQAKEVIQGEVkclkLELDAERT 821
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVD-----LSEEAKLLLQQLSELESQL----AEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 822 RAEQEWDAVARQLAQAEQEGQASLErqkvaheeevnrlqekwekerSWLQQELDKTLETLERERAELETKLREQQTEMEA 901
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQ---------------------SPVIQQLRAQLAELEAELAELSARYTPNHPDVIA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 902 IRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQQLERLRQDM-KIQKLK-EQETTGMLQAQLQETQQ 979
Cdd:COG3206 296 LRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEaELRRLErEVEVARELYESLLQRLE 375
|
....*...
gi 189458802 980 ELKEAAQQ 987
Cdd:COG3206 376 EARLAEAL 383
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1251-1873 |
5.10e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.96 E-value: 5.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1251 RDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELR----DLHETAASLQSRL----- 1321
Cdd:pfam15921 305 QEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARterdQFSQESGNLDDQLqklla 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1322 ----RQAELQKMEAQNDRelLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRT--------ARSALKLKNEELEs 1389
Cdd:pfam15921 385 dlhkREKELSLEKEQNKR--LWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgqmerQMAAIQGKNESLE- 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1390 ereRAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKqremqkaALELLSLDLKKRSREVDlqqe 1469
Cdd:pfam15921 462 ---KVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKER-------AIEATNAEITKLRSRVD---- 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1470 qiqeleqcrsvlehlpMAVQEReQKLSVQRDQIRELENDREAQRsvlehqlLDLEQKAQVIESQRGQIQDLKKQLGTLEC 1549
Cdd:pfam15921 528 ----------------LKLQEL-QHLKNEGDHLRNVQTECEALK-------LQMAEKDKVIEILRQQIENMTQLVGQHGR 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1550 LALELeeshhKVESQQkmiteLEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQ 1629
Cdd:pfam15921 584 TAGAM-----QVEKAQ-----LEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQ 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1630 qidelqkqqeqlaqalerkgqelvlqkERIQVLEDQRTLQTKI--LEEDLEQIKHSLRERSQELASqwqlvheraddgks 1707
Cdd:pfam15921 654 ---------------------------ERDQLLNEVKTSRNELnsLSEDYEVLKRNFRNKSEEMET-------------- 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1708 pskgqrgSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVgetslllTHREQETATLQ---QHLQEAKE 1784
Cdd:pfam15921 693 -------TTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQI-------TAKRGQIDALQskiQFLEEAMT 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1785 QGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELE-EHREQVR-R 1862
Cdd:pfam15921 759 NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQrQEQESVRlK 838
|
650
....*....|.
gi 189458802 1863 LQEELEVEGRQ 1873
Cdd:pfam15921 839 LQHTLDVKELQ 849
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1746-1974 |
5.39e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 5.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1746 QLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELRE---QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQ 1822
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALArriRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1823 DQEESMklkTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRC 1902
Cdd:COG4942 104 EELAEL---LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189458802 1903 AEQAQEHEaeartlqdswlQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQ 1974
Cdd:COG4942 181 AELEEERA-----------ALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1614-2063 |
7.77e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.41 E-value: 7.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1614 AKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERiqvledqrtlqTKILEEDLEQIKHSLRERSQELAS 1693
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEA-----------ESDLEQDYQAASDHLNLVQTALRQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1694 QWQLvhERAddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLThrEQETA 1773
Cdd:PRK04863 347 QEKI--ERY----------QADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALD--VQQTR 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1774 TLQ-QHLQEAKEQGelreqvlQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAAL---EQAHATLKER 1849
Cdd:PRK04863 413 AIQyQQAVQALERA-------KQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHsqfEQAYQLVRKI 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1850 QGELEehREQVRRLQEELEVEGRQVRALEEVLGDLRAESREhekavlaLQQRCAEQAQeheaeARTLQDSWLQAQATLTE 1929
Cdd:PRK04863 486 AGEVS--RSEAWDVARELLRRLREQRHLAEQLQQLRMRLSE-------LEQRLRQQQR-----AERLLAEFCKRLGKNLD 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1930 QEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEE 2009
Cdd:PRK04863 552 DEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTE 631
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 2010 AlriregeIQAQALQHHEVTQ---HLQQELCQKKEELRQLLEKAGARRSQENGIQEK 2063
Cdd:PRK04863 632 Y-------MQQLLERERELTVerdELAARKQALDEEIERLSQPGGSEDPRLNALAER 681
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1231-1443 |
9.27e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 9.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1231 EAVALALQKLHQDVWKARQARDDLRDQVQKLvqrltdteAQKSQVHSELQDLQRQLSQSQEEKSKW-----EGRQNSLES 1305
Cdd:COG4913 224 FEAADALVEHFDDLERAHEALEDAREQIELL--------EPIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1306 ELRDLHETAASLQSRLRQAELQKMEAQNDRELLQAS--------KEKLSAQVEHLQAcvaEAQAQADAAAVLEEDLRTAR 1377
Cdd:COG4913 296 ELEELRAELARLEAELERLEARLDALREELDELEAQirgnggdrLEQLEREIERLER---ELEERERRRARLEALLAALG 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 1378 SALKLKNEELESERERAQALQEQGElkvAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQR 1443
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALE---EELEALEEALAEAEAALRDLRRELRELEAEIASLERRK 435
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1791-2022 |
1.28e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1791 QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVE 1870
Cdd:COG3883 19 QAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1871 GRQVRALEEVLG-----------DLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA 1939
Cdd:COG3883 99 GGSVSYLDVLLGsesfsdfldrlSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1940 ENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQ 2019
Cdd:COG3883 179 EQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAA 258
|
...
gi 189458802 2020 AQA 2022
Cdd:COG3883 259 AGS 261
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
762-1188 |
1.29e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 762 GLRSAKEQLESNLFEAQQQNSVIQVTK------GQLEVQIQTIIQAKEVIQGEVKCLKLELDAErtrAEQEWDAVARQLA 835
Cdd:COG3096 226 GVRKAFQDMEAALRENRMTLEAIRVTQsdrdlfKHLITEATNYVAADYMRHANERRELSERALE---LRRELFGARRQLA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 836 qAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ--QELDKTLETLERERAELEtKLREQQTEMEAIRAQREEERSQA 913
Cdd:COG3096 303 -EEQYRLVEMARELEELSARESDLEQDYQAASDHLNlvQTALRQQEKIERYQEDLE-ELTERLEEQEEVVEEAAEQLAEA 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 914 DSALYQMQLETEKERVSL--LETLLRTQKELADASQQ----LERLRQ-----DMKIQKLKEQETTgmLQAQLQETQQELK 982
Cdd:COG3096 381 EARLEAAEEEVDSLKSQLadYQQALDVQQTRAIQYQQavqaLEKARAlcglpDLTPENAEDYLAA--FRAKEQQATEEVL 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 983 EAAQQHRD-DLAAFQKDK-LDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQEcsriqkelekenASLALSLVEKEK 1060
Cdd:COG3096 459 ELEQKLSVaDAARRQFEKaYELVCKIAGEVERSQAWQTARELLRRYRSQQALAQRL------------QQLRAQLAELEQ 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1061 RLLILQEADSVRQQELSSLRQDIQEAQEGQRELgVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQL--RASLW- 1137
Cdd:COG3096 527 RLRQQQNAERLLEEFCQRIGQQLDAAEELEELL-AELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELaaRAPAWl 605
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1138 AQEAKATQLQLQLRST-----------ESQLEALVAEQQPENQAQAQLASL---CSVLQQALGSA 1188
Cdd:COG3096 606 AAQDALERLREQSGEAladsqevtaamQQLLEREREATVERDELAARKQALesqIERLSQPGGAE 670
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
567-1003 |
1.40e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.64 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 567 VAAALARAEQSIVELSGSENSLKAEVADLRaaaVKLGALNEALaldkvelnqqllqleqenQSLCSRVEAAEQLRSALQV 646
Cdd:PRK04863 270 VAADYMRHANERRVHLEEALELRRELYTSR---RQLAAEQYRL------------------VEMARELAELNEAESDLEQ 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 647 DLaEAERRREALWEKKTQLETQLQKAEEAGAELQAELrgtrEEKEELkdkLSEAHHQQETATAHLEQLHQDAERQEETLA 726
Cdd:PRK04863 329 DY-QAASDHLNLVQTALRQQEKIERYQADLEELEERL----EEQNEV---VEEADEQQEENEARAEAAEEEVDELKSQLA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 727 RAVQEKEALVRERAALEVRLQAVERDRQ-----DLTEHVLG-----LRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQ 796
Cdd:PRK04863 401 DYQQALDVQQTRAIQYQQAVQALERAKQlcglpDLTADNAEdwleeFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQ 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 797 TIIQakevIQGEVkclkleldaERTRAEQEWDAVARQL----AQAEQEGQAsleRQKVAHEEEVNRLQEKWEKERSWLQQ 872
Cdd:PRK04863 481 LVRK----IAGEV---------SRSEAWDVARELLRRLreqrHLAEQLQQL---RMRLSELEQRLRQQQRAERLLAEFCK 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 873 ELDKTLET---LERERAELETKLREQQTEMEAIRAQREEERSQadsalyQMQLETEKERVSLLETLLRTqkeladASQQL 949
Cdd:PRK04863 545 RLGKNLDDedeLEQLQEELEARLESLSESVSEARERRMALRQQ------LEQLQARIQRLAARAPAWLA------AQDAL 612
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 189458802 950 ERLRQdmkiQKLKEQETTGMLQAQLQETQQELKEaAQQHRDDLAAfQKDKLDLQ 1003
Cdd:PRK04863 613 ARLRE----QSGEEFEDSQDVTEYMQQLLERERE-LTVERDELAA-RKQALDEE 660
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1281-1849 |
1.41e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1281 DLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQ 1360
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIE 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1361 AQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVaqgkaLQENLALLAQTLSNREREVETLQAEVQELE 1440
Cdd:PRK03918 270 ELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEK-----RLSRLEEEINGIEERIKELEEKEERLEELK 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1441 KQREMQKAALEllslDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQERE-QKLSVQRDQIRELENDREAQRSVLEHQ 1519
Cdd:PRK03918 345 KKLKELEKRLE----ELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKElEELEKAKEEIEEEISKITARIGELKKE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1520 LLDLEQKAQVIESQRGQIQDLKKQLgTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHL--TLDLEERSQELQ 1597
Cdd:PRK03918 421 IKELKKAIEELKKAKGKCPVCGREL-TEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELekVLKKESELIKLK 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1598 AQSSQLHELENH-STHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQ---ELVLQKERIQVLEDQRTLQTKIL 1673
Cdd:PRK03918 500 ELAEQLKELEEKlKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkkKLAELEKKLDELEEELAELLKEL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1674 EEDLEQIKHSLRERSQELasqwqlvhERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQG 1753
Cdd:PRK03918 580 EELGFESVEELEERLKEL--------EPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEE 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1754 LHRKVGETslllTHREQEtatlQQHLQEAKEQGELREQV--LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlK 1831
Cdd:PRK03918 652 LEKKYSEE----EYEELR----EEYLELSRELAGLRAELeeLEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALE-R 722
|
570
....*....|....*...
gi 189458802 1832 TSALQAALEQAHATLKER 1849
Cdd:PRK03918 723 VEELREKVKKYKALLKER 740
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
569-989 |
1.42e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 569 AALARAEQSIVELSGSENSLKAEVADLRAAAVKLGALNEALAldKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDL 648
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELE--ELREELEKLEKLLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 649 AEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEElkdklseahhQQETATAHLEQLHQDAERQEETLARA 728
Cdd:COG4717 149 EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEE----------ELQDLAEELEELQQRLAELEEELEEA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 729 VQEKEALVRERAALEVRLQAVERDRQDLTEH----VLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEV 804
Cdd:COG4717 219 QEELEELEEELEQLENELEAAALEERLKEARllllIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 805 IQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLE-- 882
Cdd:COG4717 299 SLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLae 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 883 ---------RERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLET-LLRTQKELADASQQLERL 952
Cdd:COG4717 379 agvedeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEeLEELEEELEELREELAEL 458
|
410 420 430
....*....|....*....|....*....|....*..
gi 189458802 953 RQdmKIQKLKEQETTGMLQAQLQETQQELKEAAQQHR 989
Cdd:COG4717 459 EA--ELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1369-1544 |
1.48e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1369 LEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKA 1448
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1449 ALELLSLDLKKRSR----EVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLE 1524
Cdd:COG4942 105 ELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180
....*....|....*....|
gi 189458802 1525 QKAQVIESQRGQIQDLKKQL 1544
Cdd:COG4942 185 EERAALEALKAERQKLLARL 204
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1234-1694 |
1.62e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1234 ALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQ-EEKSKWEGRQNSLESELRDLHE 1312
Cdd:COG4913 280 ALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERER 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1313 TAASLQSRLRQAELQkmeaqndrelLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERE 1392
Cdd:COG4913 360 RRARLEALLAALGLP----------LPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIA 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1393 RAQALqeqgelKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKA--------ALELL----------- 1453
Cdd:COG4913 430 SLERR------KSNIPARLLALRDALAEALGLDEAELPFVGELIEVRPEEERWRGAiervlggfALTLLvppehyaaalr 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1454 ---SLDLKKR--SREVDLQQEQIQELEQ--------------------------------CRSV--LEHLPMAV------ 1488
Cdd:COG4913 504 wvnRLHLRGRlvYERVRTGLPDPERPRLdpdslagkldfkphpfrawleaelgrrfdyvcVDSPeeLRRHPRAItragqv 583
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1489 ---QEREQKlsvqRDQIRELEN-----DREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHH- 1559
Cdd:COG4913 584 kgnGTRHEK----DDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWd 659
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1560 --KVESQQKMITELEGQREmqrvalthltlDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQ 1637
Cdd:COG4913 660 eiDVASAEREIAELEAELE-----------RLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 1638 QEQLAQALERKGQELVLqkERIQVLEDQrtLQTKILEEDLEQIKHSLRERSQELASQ 1694
Cdd:COG4913 729 LDELQDRLEAAEDLARL--ELRALLEER--FAAALGDAVERELRENLEERIDALRAR 781
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
879-1510 |
1.64e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.09 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 879 ETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLlrtQKELADASQQLERLRQDMKI 958
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEM---RARLAARKQELEEILHELES 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 959 QKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLqkqvedlmsqlVAHDDSQRLVKEEIEEKVKVAQECS 1038
Cdd:pfam01576 83 RLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEK-----------VTTEAKIKKLEEDILLLEDQNSKLS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1039 RIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGV---QVELLRQEVKEKEADFVARE 1115
Cdd:pfam01576 152 KERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKakrKLEGESTDLQEQIAELQAQI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1116 AQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSAcesRPEL 1195
Cdd:pfam01576 232 AELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEAL---KTEL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1196 RGGGDSAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQdvwkarQARDDLRDQVQKLVQRLTDTEAQKSQV 1275
Cdd:pfam01576 309 EDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHT------QALEELTEQLEQAKRNKANLEKAKQAL 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1276 HSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLhetaaslQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAc 1355
Cdd:pfam01576 383 ESENAELQAELRTLQQAKQDSEHKRKKLEGQLQEL-------QARLSESERQRAELAEKLSKLQSELESVSSLLNEAEG- 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1356 vaeaqaqadAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAE 1435
Cdd:pfam01576 455 ---------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQ 525
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1436 VQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDRE 1510
Cdd:pfam01576 526 LSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLE 600
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1775-2019 |
1.73e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.93 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1775 LQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEEsmklkTSALQAALEQAHATLKERQGELE 1854
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEE-----AKLLLQQLSELESQLAEARAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1855 EHREQVRRLQEELEVEGRQVRALEEvlgdlraesrehEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQEL 1934
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQ------------SPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALR 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1935 AALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIR 2014
Cdd:COG3206 305 AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALT 384
|
....*
gi 189458802 2015 EGEIQ 2019
Cdd:COG3206 385 VGNVR 389
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
670-1029 |
2.17e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 2.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 670 QKAEEAGAELQAELRGTREEKEELKDKLSEAHHQqetatahLEQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAV 749
Cdd:TIGR04523 303 QKEQDWNKELKSELKNQEKKLEEIQNQISQNNKI-------ISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKL 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 750 ERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSviqvtkgQLEVQIQTIIQAKEVIQGEVKCLKleldAERTRAEQEWDA 829
Cdd:TIGR04523 376 KKENQSYKQEIKNLESQINDLESKIQNQEKLNQ-------QKDEQIKKLQQEKELLEKEIERLK----ETIIKNNSEIKD 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 830 VARQLAQAEQEGQaSLERQKVAHEEEVNRLQEKWEKERS---WLQQELD---KTLETLERERAELETK---LREQQTEME 900
Cdd:TIGR04523 445 LTNQDSVKELIIK-NLDNTRESLETQLKVLSRSINKIKQnleQKQKELKskeKELKKLNEEKKELEEKvkdLTKKISSLK 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 901 AIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKeladasqqlerLRQDMKIQKLKEQettgmlQAQLQETQQE 980
Cdd:TIGR04523 524 EKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEI-----------DEKNKEIEELKQT------QKSLKKKQEE 586
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 189458802 981 LKEAAQQhrddlaaFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEE 1029
Cdd:TIGR04523 587 KQELIDQ-------KEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEK 628
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1796-2188 |
2.38e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1796 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLK--ERQGELEEHREQVRRLQEELEVEGRQ 1873
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1874 VRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVS 1953
Cdd:COG4717 155 LEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1954 QAEALQE---------------ALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEI 2018
Cdd:COG4717 235 ELEAAALeerlkearlllliaaALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALE 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2019 QAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGI--QEKQSLEQERQEETRRLLESLK----ELQLTVAQRE 2092
Cdd:COG4717 315 ELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAeeLEEELQLEELEQEIAALLAEAGvedeEELRAALEQA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2093 EEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEitmflQA 2172
Cdd:COG4717 395 EEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEE-----DG 469
|
410
....*....|....*.
gi 189458802 2173 SVLERESEQQRLQEEL 2188
Cdd:COG4717 470 ELAELLQELEELKAEL 485
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1254-1686 |
2.38e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.55 E-value: 2.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1254 LRDQVQKLVQRLTDTEAQKSQVHSELQDLqrqLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRlrQAELQKMEAQN 1333
Cdd:TIGR04523 230 LKDNIEKKQQEINEKTTEISNTQTQLNQL---KDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQL--KSEISDLNNQK 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1334 DRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALK-LKNEELESERERAQALQEQGELKVAQGKALQ 1412
Cdd:TIGR04523 305 EQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnSESENSEKQRELEEKQNEIEKLKKENQSYKQ 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1413 ENLALLAQTlSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEhlpMAVQERE 1492
Cdd:TIGR04523 385 EIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE---LIIKNLD 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1493 QKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQ----QKMI 1568
Cdd:TIGR04523 461 NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEkkekESKI 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1569 TELEGQREMQRVALTHLtlDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERK 1648
Cdd:TIGR04523 541 SDLEDELNKDDFELKKE--NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKE 618
|
410 420 430
....*....|....*....|....*....|....*...
gi 189458802 1649 GQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRE 1686
Cdd:TIGR04523 619 LEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1716-1936 |
2.59e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1716 LEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQG 1795
Cdd:COG4942 29 LEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1796 QLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQahatLKERQGELEEHREQVRRLQEELEVEGRQVR 1875
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEE----LRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189458802 1876 ALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAA 1936
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1229-1448 |
2.77e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.44 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1229 SPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQL-SQSQEEKSKWEGRQnsLESEL 1307
Cdd:PRK11281 53 LLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNdEETRETLSTLSLRQ--LESRL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1308 RDLHETAASLQSRLRQAELQKMEAQNDRELLQASkekLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSA----LKLK 1383
Cdd:PRK11281 131 AQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAA---LYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAeqalLNAQ 207
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 1384 NE----ELESERERAQALQEQGELKVAQGKALQENLALLaQTLSNREREVETlQAEVQELEKQREMQKA 1448
Cdd:PRK11281 208 NDlqrkSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLL-QEAINSKRLTLS-EKTVQEAQSQDEAARI 274
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1727-1981 |
3.04e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.49 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1727 EKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLL-THREQETATLQQHLQEAKEQGEL--REQVLQGQLEEAQRD 1803
Cdd:PRK04863 850 ERALADHESQEQQQRSQLEQAKEGLSALNRLLPRLNLLAdETLADRVEEIREQLDEAEEAKRFvqQHGNALAQLEPIVSV 929
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1804 LAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALE-QAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLG 1882
Cdd:PRK04863 930 LQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQrRAHFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLR 1009
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1883 DLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQ----EQELAALRAENQYSRRQEEAAVSQAEAL 1958
Cdd:PRK04863 1010 QAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERararRDELHARLSANRSRRNQLEKQLTFCEAE 1089
|
250 260
....*....|....*....|...
gi 189458802 1959 QEALSKAQAALQEKEQSLLEQAE 1981
Cdd:PRK04863 1090 MDNLTKKLRKLERDYHEMREQVV 1112
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1385-2087 |
3.15e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.12 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1385 EELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREM-----QKAALELLSLDLKK 1459
Cdd:TIGR00618 225 EKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERinrarKAAPLAAHIKAVTQ 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1460 RSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIEsqrgqiqd 1539
Cdd:TIGR00618 305 IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHT-------- 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1540 LKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQE 1619
Cdd:TIGR00618 377 LTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKL 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1620 RDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKILEEdLEQIKHSLRERSQELASQWQLVH 1699
Cdd:TIGR00618 457 EKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIH-PNPARQDIDNPGPLTRRMQRGEQ 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1700 ERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERI---QELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQ 1776
Cdd:TIGR00618 536 TYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSiltQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQH 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1777 QHLQEAKEQGELRE--QVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ--EESMKLKTSALQAALEQAHATLKERQGE 1852
Cdd:TIGR00618 616 ALLRKLQPEQDLQDvrLHLQQCSQELALKLTALHALQLTLTQERVREHALsiRVLPKELLASRQLALQKMQSEKEQLTYW 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1853 LEEHREQVRRLQEELEVEG---RQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTE 1929
Cdd:TIGR00618 696 KEMLAQCQTLLRELETHIEeydREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQ 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1930 QEQELAALRAENQYSRRQEEAAVSQaeaLQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLee 2009
Cdd:TIGR00618 776 TGAELSHLAAEIQFFNRLREEDTHL---LKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQ-- 850
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2010 alriregeiqaqaLQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEK--QSLEQERQEETRRLLESLKELQLT 2087
Cdd:TIGR00618 851 -------------LLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDalIKFLHEITLYANVRLANQSEGRFH 917
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1419-1658 |
3.28e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1419 AQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEqiqeleqcrsvlehlpmAVQEREQKLSVQ 1498
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-----------------RIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1499 RDQIRELENDREAQRSVLEHQLLDLEQKAQVIEsQRGQIQDLKKQLGTLECLALELEESHHK--VESQQKMITELEGQRE 1576
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQKEELAELLRALY-RLGRQPPLALLLSPEDFLDAVRRLQYLKylAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1577 MQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQK 1656
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
..
gi 189458802 1657 ER 1658
Cdd:COG4942 241 ER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1563-1791 |
3.30e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1563 SQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLA 1642
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1643 QALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLrersQELASQWQLVHERADDGKSPSKGQRGSLEHLKLI 1722
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL----QYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 1723 LRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQ 1791
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
772-1101 |
3.36e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 46.06 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 772 SNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEvIQGEVKCLK------LELDAERTRAEQEWDAVARQLAQAEQEGQASl 845
Cdd:PRK11281 22 LSSAFARAASNGDLPTEADVQAQLDALNKQKL-LEAEDKLVQqdleqtLALLDKIDRQKEETEQLKQQLAQAPAKLRQA- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 846 erqkvahEEEVNRLQEKwekerswLQQELDKTLETLERerAELETKLREQQTEMEaiRAQreEERSQADSALYQMQLETE 925
Cdd:PRK11281 100 -------QAELEALKDD-------NDEETRETLSTLSL--RQLESRLAQTLDQLQ--NAQ--NDLAEYNSQLVSLQTQPE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 926 kervslletllRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1005
Cdd:PRK11281 160 -----------RAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1006 VEDLMSQLVAHDDSQRLVKEEIEEK-VKVAQECSRIQKELEKENASLALSLVEKE--------KRLLI-LQEADSVRQQE 1075
Cdd:PRK11281 229 RDYLTARIQRLEHQLQLLQEAINSKrLTLSEKTVQEAQSQDEAARIQANPLVAQEleinlqlsQRLLKaTEKLNTLTQQN 308
|
330 340
....*....|....*....|....*.
gi 189458802 1076 LsSLRQDIQEAQEGQRELGVQVELLR 1101
Cdd:PRK11281 309 L-RVKNWLDRLTQSERNIKEQISVLK 333
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
673-1450 |
3.41e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.19 E-value: 3.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 673 EEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLH-QDAERQEETLARAVQEKEALVRERAALEVRLQ-AVE 750
Cdd:TIGR00606 318 ERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQeHIRARDSLIQSLATRLELDGFERGPFSERQIKnFHT 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 751 RDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELdaertraeQEWDAV 830
Cdd:TIGR00606 398 LVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL--------QQLEGS 469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 831 ARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELE-TKLREQQTEMEAIRAQREEE 909
Cdd:TIGR00606 470 SDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNhHTTTRTQMEMLTKDKMDKDE 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 910 R-------------SQADSALYQMQLET-----EKERVSLLETLLRTQKELADASQQLERLRQDMKI---------QKLK 962
Cdd:TIGR00606 550 QirkiksrhsdeltSLLGYFPNKKQLEDwlhskSKEINQTRDRLAKLNKELASLEQNKNHINNELESkeeqlssyeDKLF 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 963 EQETTGMLQAQLQETQQELKEAAQQhRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQK 1042
Cdd:TIGR00606 630 DVCGSQDEESDLERLKEEIEKSSKQ-RAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAP 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1043 ELEKENASLalsLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEadfvareaqlleEL 1122
Cdd:TIGR00606 709 DKLKSTESE---LKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQE------------TL 773
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1123 EASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPenqaqaqlASLCSVLQQALGSACESRPELRGGGDSA 1202
Cdd:TIGR00606 774 LGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQG--------SDLDRTVQQVNQEKQEKQHELDTVVSKI 845
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1203 PTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQdvwkARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDL 1282
Cdd:TIGR00606 846 ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQ----FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKD 921
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1283 QRQ----LSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQA-ELQKMEAQNDRELLQASKEKLSAQVEHLQACVA 1357
Cdd:TIGR00606 922 QQEkeelISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGkDDYLKQKETELNTVNAQLEECEKHQEKINEDMR 1001
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1358 EAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQaevQ 1437
Cdd:TIGR00606 1002 LMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQ---K 1078
|
810
....*....|...
gi 189458802 1438 ELEKQREMQKAAL 1450
Cdd:TIGR00606 1079 GYEKEIKHFKKEL 1091
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1585-1842 |
3.54e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1585 LTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLED 1664
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1665 QRtlqtKILEEDLEQIKHSLRERSQELAsqwqlvheraddgkspskgQRGSLEHLKLILRDkeKEVECQQERIQELQGHM 1744
Cdd:COG4942 91 EI----AELRAELEAQKEELAELLRALY-------------------RLGRQPPLALLLSP--EDFLDAVRRLQYLKYLA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1745 GQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ 1824
Cdd:COG4942 146 PARREQAEELRADLAELAALRAELEAERAELEALLAELEEE----RAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
250
....*....|....*...
gi 189458802 1825 EESMKLKTSALQAALEQA 1842
Cdd:COG4942 222 AEELEALIARLEAEAAAA 239
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
815-1638 |
3.56e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 3.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 815 ELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLRE 894
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 895 QQTEMEAIRAQREEERSQADSALYQMQLETEKErvslletlLRTQKEL--ADASQQLERLRQDMKIQKLKEQETTgmlqa 972
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAEEVRKAEE--------LRKAEDArkAEAARKAEEERKAEEARKAEDAKKA----- 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 973 qlqetqQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDdSQRLVKEEIEEKVKVAQecsrIQKELEKENASLA 1052
Cdd:PTZ00121 1227 ------EAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF-ARRQAAIKAEEARKADE----LKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1053 LSLVEKEKRLLILQEADSVRQQElsSLRQDIQEAQEGQRELGVQVEllrqEVKEKEADFVAREAQLLEELEASRvaEQQL 1132
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAKKAD--EAKKKAEEAKKKADAAKKKAE----EAKKAAEAAKAEAEAAADEAEAAE--EKAE 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1133 RASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDS---APTLWGPD 1209
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAkkkAEEAKKAD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1210 PDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQvhselqdlqRQLSQS 1289
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA---------DEAKKA 1518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1290 QEEKSKWEGRQnsleSELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVL 1369
Cdd:PTZ00121 1519 EEAKKADEAKK----AEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1370 EEDLRTARSALKLKNEEL---ESERERAQALQEQGELK--VAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQRE 1444
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAkkaEEAKIKAEELKKAEEEKkkVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1445 MQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEhqlldle 1524
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAE------- 1747
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1525 qKAQVIESQRGQIQDLKKQlgtleclaLELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLH 1604
Cdd:PTZ00121 1748 -EAKKDEEEKKKIAHLKKE--------EEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGN 1818
|
810 820 830
....*....|....*....|....*....|....*
gi 189458802 1605 ELENHSTHL-AKELQERDQEVTSQRQQIDELQKQQ 1638
Cdd:PTZ00121 1819 LVINDSKEMeDSAIKEVADSKNMQLEEADAFEKHK 1853
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1248-1848 |
3.79e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.78 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1248 RQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQ 1327
Cdd:TIGR04523 116 KEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1328 KMEAQNDRELLQASKEK---LSAQVEHLQacvaeaqaqaDAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELK 1404
Cdd:TIGR04523 196 LLKLELLLSNLKKKIQKnksLESQISELK----------KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1405 VAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREmqkaalELLSLDLKKRSREVDLQqeqiqeleqcrsvLEHL 1484
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE------QDWNKELKSELKNQEKK-------------LEEI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1485 PMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEEshhKVESQ 1564
Cdd:TIGR04523 327 QNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLES---KIQNQ 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1565 QKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQA 1644
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQN 483
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1645 LERKGQELVLQKERIQVLedqrTLQTKILEE---DLEQIKHSLRERSQELASQwqlvheraddgKSPSKGQRGSLEHlKL 1721
Cdd:TIGR04523 484 LEQKQKELKSKEKELKKL----NEEKKELEEkvkDLTKKISSLKEKIEKLESE-----------KKEKESKISDLED-EL 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1722 ILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKvgetslllthreqetatlQQHLQEAKEQGELREQVLQGQLEEAQ 1801
Cdd:TIGR04523 548 NKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKK------------------QEEKQELIDQKEKEKKDLIKEIEEKE 609
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 189458802 1802 RDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKE 1848
Cdd:TIGR04523 610 KKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1036-1785 |
3.93e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.90 E-value: 3.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1036 ECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEADFVARE 1115
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1116 AQLLEELEASRVAEQQLRASLwAQEAKATQLQLQLRSTESQLEALVAeQQPENQAQAQLASLCSVLQQAlgSACESRPEL 1195
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEA-ARKAEEVRKAEELRKAEDARKAEAA-RKAEEERKAEEARKAEDAKKA--EAVKKAEEA 1235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1196 RgggdsaptlwgpdPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDdlRDQVQKLVQRLTDTEAQKSqv 1275
Cdd:PTZ00121 1236 K-------------KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARK--ADELKKAEEKKKADEAKKA-- 1298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1276 hselqdlqrqlsqsqEEKSKWEgrqnslesELRDLHETAaslqsrlRQAELQKMEAQNDRELLQASKEKLSAQVEHLQAC 1355
Cdd:PTZ00121 1299 ---------------EEKKKAD--------EAKKKAEEA-------KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA 1348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1356 VAEAQAQADAAAVLEEDLRTAR----------SALKLKNEEL----------ESERERAQALQEQGELKV----AQGKAL 1411
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEAAEkkkeeakkkaDAAKKKAEEKkkadeakkkaEEDKKKADELKKAAAAKKkadeAKKKAE 1428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1412 QENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLD-LKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQE 1490
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEA 1508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1491 REQKlsvqrDQIRELENDREAQ--RSVLEHQLLDLEQKAQviesQRGQIQDLKKQLGTLECLALELEESHHKVESQQKMI 1568
Cdd:PTZ00121 1509 KKKA-----DEAKKAEEAKKADeaKKAEEAKKADEAKKAE----EKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMA 1579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1569 TELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERk 1648
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE- 1658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1649 gQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEK 1728
Cdd:PTZ00121 1659 -NKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKK 1737
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 1729 EVECQQERIQELQGHMGQlEQQLQglHRKVGETSLLLTHREQETATLQQHLQEAKEQ 1785
Cdd:PTZ00121 1738 EAEEDKKKAEEAKKDEEE-KKKIA--HLKKEEEKKAEEIRKEKEAVIEEELDEEDEK 1791
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1256-1962 |
4.63e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.60 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1256 DQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKwegRQNSLESELRDLHETAASLQSRLRQ-AELQKMEAQND 1334
Cdd:pfam12128 244 TKLQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQE---TSAELNQLLRTLDDQWKEKRDELNGeLSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1335 RELLQASKEKLSAqveHLQACVAEAQAQAdaaavleEDLRTARSALKLKNEELESERERAQALQEQGELKVAqgKALQEN 1414
Cdd:pfam12128 321 RSELEALEDQHGA---FLDADIETAAADQ-------EQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS--KIKEQN 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1415 LALLAQTLSNREREVET-----------LQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEH 1483
Cdd:pfam12128 389 NRDIAGIKDKLAKIREArdrqlavaeddLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLEN 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1484 LPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTL--------ECLALELE 1555
Cdd:pfam12128 469 FDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQagtllhflRKEAPDWE 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1556 ESHHKVESQQ-----KMITELEGQREMQRVALTHLTLDLEE-------------------RSQELQAQSSQLHELENHST 1611
Cdd:pfam12128 549 QSIGKVISPEllhrtDLDPEVWDGSVGGELNLYGVKLDLKRidvpewaaseeelrerldkAEEALQSAREKQAAAEEQLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1612 HLAKELQERDQEVT-----------SQRQQIDELQKQQEQLAQALERKGQELVlqkERIQVLEDQRTLQTKILEEDLEQI 1680
Cdd:pfam12128 629 QANGELEKASREETfartalknarlDLRRLFDEKQSEKDKKNKALAERKDSAN---ERLNSLEAQLKQLDKKHQAWLEEQ 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1681 KHSLRERSQELASQWQLVHERADDgkspskgQRGSLEHLKLILRD--KEKEVECQQERIQELQGhMGQLEQQLQGLHRKV 1758
Cdd:pfam12128 706 KEQKREARTEKQAYWQVVEGALDA-------QLALLKAAIAARRSgaKAELKALETWYKRDLAS-LGVDPDVIAKLKREI 777
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1759 GETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAA 1838
Cdd:pfam12128 778 RTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVR 857
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1839 LEQAHATLKERQGELEEHREQVRRLQEELEVeGRQVRALEEVLgdlraesREHEKAVLALQQRCAEQAQEHEAEART-LQ 1917
Cdd:pfam12128 858 LSENLRGLRCEMSKLATLKEDANSEQAQGSI-GERLAQLEDLK-------LKRDYLSESVKKYVEHFKNVIADHSGSgLA 929
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 189458802 1918 DSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEAL 1962
Cdd:pfam12128 930 ETWESLREEDHYQNDKGIRLLDYRKLVPYLEQWFDVRVPQSIMVL 974
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1673-1901 |
4.84e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1673 LEEDLEQIKHSLRERSQELASQwqlvheraddgkspskgqRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQ 1752
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAAL------------------KKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1753 GLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA-------QRDHELETLRQEKQQTQDQE 1825
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQylkylapARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 1826 ESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQR 1901
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
798-944 |
5.36e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 798 IIQAKEviqgEVKCLKLELDAERTRAEQEWDAVARQLAQAEQegqaSLERQKVAHEEEVNRLQEKwekerswlQQELDKT 877
Cdd:PRK12704 59 LLEAKE----EIHKLRNEFEKELRERRNELQKLEKRLLQKEE----NLDRKLELLEKREEELEKK--------EKELEQK 122
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 878 LETLERERAELETKLREQQTEMEAIRA-QREEERSQadsALYQMQLETEKERVSLLETLLRTQKELAD 944
Cdd:PRK12704 123 QQELEKKEEELEELIEEQLQELERISGlTAEEAKEI---LLEKVEEEARHEAAVLIKEIEEEAKEEAD 187
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1254-1822 |
5.58e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 45.34 E-value: 5.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1254 LRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQlSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQ--AELQKMEA 1331
Cdd:TIGR00618 305 IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQ-QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQqhTLTQHIHT 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1332 -QNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKA 1410
Cdd:TIGR00618 384 lQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQE 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1411 LQENLALLAQTLSNrereVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQE 1490
Cdd:TIGR00618 464 SAQSLKEREQQLQT----KEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQ 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1491 REQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLgtleclalelEESHHKVESQQKMITE 1570
Cdd:TIGR00618 540 LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNIT----------VRLQDLTEKLSEAEDM 609
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1571 LEGQREMQRVALTHlTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQK--QQEQLAQALERK 1648
Cdd:TIGR00618 610 LACEQHALLRKLQP-EQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELlaSRQLALQKMQSE 688
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1649 GQELVLQKERI-QVLEDQRTLQTKILEED--LEQIKHSLRERSQELASQWQLVHERAddgKSPSKGQRGSLEHLKLILRD 1725
Cdd:TIGR00618 689 KEQLTYWKEMLaQCQTLLRELETHIEEYDreFNEIENASSSLGSDLAAREDALNQSL---KELMHQARTVLKARTEAHFN 765
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1726 KEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLA 1805
Cdd:TIGR00618 766 NNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLG 845
|
570
....*....|....*..
gi 189458802 1806 QRDHELETLRQEKQQTQ 1822
Cdd:TIGR00618 846 EITHQLLKYEECSKQLA 862
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
871-1111 |
6.56e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 6.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 871 QQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLetekerVSLLETLLRTQKELADASQQLE 950
Cdd:COG3206 170 REEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQL------SELESQLAEARAELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 951 RLRQDMK-----IQKLKEQETTGMLQAQLQETQQELKEAAQQHRDDLAAFQKdkldLQKQVEDLMSQLVahddsqrlvke 1025
Cdd:COG3206 244 ALRAQLGsgpdaLPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIA----LRAQIAALRAQLQ----------- 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1026 eiEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVK 1105
Cdd:COG3206 309 --QEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEA 382
|
....*.
gi 189458802 1106 EKEADF 1111
Cdd:COG3206 383 LTVGNV 388
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1413-1973 |
6.80e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.05 E-value: 6.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1413 ENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALE-------LLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLP 1485
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEevlreinEISSELPELREELEKLEKEVKELEELKEEIEELE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1486 MAVQEREQKLSVQRDQIRELENDREaqrsvlehqllDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQ 1565
Cdd:PRK03918 245 KELESLEGSKRKLEEKIRELEERIE-----------ELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1566 KMITELEGQREmqrvalthltlDLEERSQELQAQSSQLHELENHSTHLAK---ELQERDQEVTSQRQQIDELQKQQEQLA 1642
Cdd:PRK03918 314 KRLSRLEEEIN-----------GIEERIKELEEKEERLEELKKKLKELEKrleELEERHELYEEAKAKKEELERLKKRLT 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1643 ----QALERKGQELVLQKERIQvlEDQRTLQTKILEedLEQIKHSLRERSQELASQwqlvheradDGKSPSKGQRGSLEH 1718
Cdd:PRK03918 383 gltpEKLEKELEELEKAKEEIE--EEISKITARIGE--LKKEIKELKKAIEELKKA---------KGKCPVCGRELTEEH 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1719 LKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTH-------REQETATLQQHLQEAKEQGELREQ 1791
Cdd:PRK03918 450 RKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLkelaeqlKELEEKLKKYNLEELEKKAEEYEK 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1792 VLQ--GQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQ----AHATLKERQGELEEH--------- 1856
Cdd:PRK03918 530 LKEklIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEElgfeSVEELEERLKELEPFyneylelkd 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1857 -REQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEqaQEHEaeartlqdswlQAQATLTEQEQELA 1935
Cdd:PRK03918 610 aEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYE-----------ELREEYLELSRELA 676
|
570 580 590
....*....|....*....|....*....|....*...
gi 189458802 1936 ALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1973
Cdd:PRK03918 677 GLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
844-1064 |
7.11e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 844 SLERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELEtklrEQQTEMEAIRAQrEEERSQADSALYQ--MQ 921
Cdd:PHA02562 192 HIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIE----ELTDELLNLVMD-IEDPSAALNKLNTaaAK 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 922 LETEKERVSLLETLLRTQKELADASQQLERlrQDMKIQKLKEQETTGMLQ-AQLQETQQELKEAAqqhrDDLAAFQKDKL 1000
Cdd:PHA02562 267 IKSKIEQFQKVIKMYEKGGVCPTCTQQISE--GPDRITKIKDKLKELQHSlEKLDTAIDELEEIM----DEFNEQSKKLL 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 1001 DLQKQVEDLMSQLVAHDDSQRLVKEEIE----EKVKVAQECSRIQKELEKENASLALSLVEKEKRLLI 1064
Cdd:PHA02562 341 ELKNKISTNKQSLITLVDKAKKVKAAIEelqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1246-1624 |
7.33e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.03 E-value: 7.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1246 KARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAE 1325
Cdd:PRK02224 360 ELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTAR 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1326 LQKMEAQndrELLQASKEKLSAQVEHLQACVAEAQAQADAAavleEDLRTARSALKLKNEELESERERAQALQE---QGE 1402
Cdd:PRK02224 440 ERVEEAE---ALLEAGKCPECGQPVEGSPHVETIEEDRERV----EELEAELEDLEEEVEEVEERLERAEDLVEaedRIE 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1403 LKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLE 1482
Cdd:PRK02224 513 RLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE 592
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1483 HLPMAVQERE------QKLSVQRDQIRELENDREAQRSVLEHQLLDLEQK--AQVIESQRGQIQDLKKQLGTLECLALEL 1554
Cdd:PRK02224 593 RIRTLLAAIAdaedeiERLREKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDEL 672
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1555 EESHHKVESQQKMITELEGQREMQRVALTHLtldlEERSQELQAQSSQLHELENHSTHLAKELQERDQEV 1624
Cdd:PRK02224 673 REERDDLQAEIGAVENELEELEELRERREAL----ENRVEALEALYDEAEELESMYGDLRAELRQRNVET 738
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1903-2095 |
7.46e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 7.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1903 AEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQsllEQAEL 1982
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK---EIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1983 SHTLEASTAALQATLDTCQASARQLEEALRIREGEIqAQALQHHEVTQHLQQELCQKKEELRQLLEK-AGARRSQENGIQ 2061
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDF-LDAVRRLQYLKYLAPARREQAEELRADLAElAALRAELEAERA 174
|
170 180 190
....*....|....*....|....*....|....
gi 189458802 2062 EKQSLEQERQEETRRLLESLKELQLTVAQREEEI 2095
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKEL 208
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
665-806 |
8.03e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 44.82 E-value: 8.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 665 LETQLQKAEEAGAELQAELRGTREEKEELKDKLSEahhQQETATAHLEQLHQDAerqEETLARAVQEKEALVRERAALEv 744
Cdd:PRK00409 525 LEELERELEQKAEEAEALLKEAEKLKEELEEKKEK---LQEEEDKLLEEAEKEA---QQAIKEAKKEADEIIKELRQLQ- 597
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189458802 745 RLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVtkGQlEVQIQTIIQAKEVIQ 806
Cdd:PRK00409 598 KGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV--GD-EVKYLSLGQKGEVLS 656
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1564-1869 |
8.34e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 8.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1564 QQKMITELEGQREMQRVALTHLTLDLEERSQELQ-------AQSSQLHELENHSTHLAKELQ---ERDQEVtsQRQQIDE 1633
Cdd:pfam17380 280 HQKAVSERQQQEKFEKMEQERLRQEKEEKAREVErrrkleeAEKARQAEMDRQAAIYAEQERmamEREREL--ERIRQEE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1634 LQKQQEQLAQalerkgQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQR 1713
Cdd:pfam17380 358 RKRELERIRQ------EEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1714 GSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHR----EQETATLQQHLQEAKE---QG 1786
Cdd:pfam17380 432 ARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRkraeEQRRKILEKELEERKQamiEE 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1787 ELREQVLQGQLEEAQRDLAQRDHELETlRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEE 1866
Cdd:pfam17380 512 ERKRKLLEKEMEERQKAIYEEERRREA-EEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
...
gi 189458802 1867 LEV 1869
Cdd:pfam17380 591 YEA 593
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1609-1956 |
8.85e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 8.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1609 HSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTKI------LEEDLEQIKH 1682
Cdd:pfam17380 276 HIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQermameRERELERIRQ 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1683 SLRERSQElasqwqlvheraddgkspskgqrgslehlklilRDKEKEVECQQERIQELQghMGQLEQQlQGLHRKVGETS 1762
Cdd:pfam17380 356 EERKRELE---------------------------------RIRQEEIAMEISRMRELE--RLQMERQ-QKNERVRQELE 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1763 LLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKlktsaLQAALEQA 1842
Cdd:pfam17380 400 AARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLR-----QQEEERKR 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1843 HATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGD--LRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSW 1920
Cdd:pfam17380 475 KKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRklLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRI 554
|
330 340 350
....*....|....*....|....*....|....*.
gi 189458802 1921 LQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1956
Cdd:pfam17380 555 QEQMRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
228-507 |
8.88e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 44.67 E-value: 8.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 228 SRESSGSGRTEESEPARLLLLVAKTQALEKEAHEKSQELMQLKSHGDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKA 307
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKER 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 308 LRETMEILETNHAELMEHEASLSRNAqEEKLSLQQVIKAITQALASVEEEDTVTQSSGHEDSLQSDCNGLSQFDPQdpdr 387
Cdd:TIGR02169 739 LEELEEDLSSLEQEIENVKSELKELE-ARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEAR---- 813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 388 aLTLVQSVLTRRQQAVQDLRQQLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERE 467
Cdd:TIGR02169 814 -LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 189458802 468 LLQKARGELQQQLEVLEQEAWRLRRMNMELQLQGDSAQGE 507
Cdd:TIGR02169 893 ELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE 932
|
|
| CagA_N |
pfam18971 |
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial ... |
842-1010 |
1.02e-03 |
|
CagA protein; The Helicobacter pylori type IV secretion effector CagA is a major bacterial virulence determinant and critical for gastric carcinogenesis. X-ray crystallographic analysis of the N-terminal CagA fragment (residues 1-876) revealed that the region has a structure comprised of three discrete domains. Domain I constitutes a mobile CagA N terminus, while Domain II tethers CagA to the plasma membrane by interacting with membrane phosphatidylserine. Domain III interacts intramolecularly with the intrinsically disordered C-terminal region, and this interaction potentiates the pathogenic scaffold/hub function of CagA.
Pssm-ID: 408741 [Multi-domain] Cd Length: 876 Bit Score: 44.38 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 842 QASLERQKVAHEEEVNRLQEKWEK---ERSWLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALY 918
Cdd:pfam18971 598 KAVAEAKSTGNYDEVKKAQKDLEKslrKREHLEKEVEKKLESKSGNKNKMEAKAQANSQKDEIFALINKEANRDARAIAY 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 919 QMQLETEKERVSllETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQ-------------AQLQETQQELKEAA 985
Cdd:pfam18971 678 TQNLKGIKRELS--DKLEKISKDLKDFSKSFDEFKNGKNKDFSKAEETLKALKgsvkdlginpewiSKVENLNAALNEFK 755
|
170 180
....*....|....*....|....*
gi 189458802 986 QQHRDDLAAFQKDKLDLQKQVEDLM 1010
Cdd:pfam18971 756 NGKNKDFSKVTQAKSDLENSVKDVI 780
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1058-1759 |
1.13e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1058 KEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRE-LGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASL 1136
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAElLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1137 W--AQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSACESRPELRGGGDSAPTLWGPDPDQNG 1214
Cdd:TIGR00618 243 AylTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRS 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1215 ASRLFKRWS--LPTALSPEAVALALQKLHQDVWKARQARD------DLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQL 1286
Cdd:TIGR00618 323 RAKLLMKRAahVKQQSSIEEQRRLLQTLHSQEIHIRDAHEvatsirEISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKEL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1287 SQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDrelLQASKEKLSAQVEHLQACVAEAQAQADAA 1366
Cdd:TIGR00618 403 DILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCT---AQCEKLEKIHLQESAQSLKEREQQLQTKE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1367 AVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQG--KALQENLALLAQTLSNREREVETLQAEVQELEKQRE 1444
Cdd:TIGR00618 480 QIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDnpGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1445 MQKAALELLSLDLKKRSREVDLQQEQIQELEQCRSVLEH-LPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQ---- 1519
Cdd:TIGR00618 560 SLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDlTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQqcsq 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1520 -----LLDLEQKAQVIESQRGQIQDL---KKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEE 1591
Cdd:TIGR00618 640 elalkLTALHALQLTLTQERVREHALsirVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDRE 719
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1592 RSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQTK 1671
Cdd:TIGR00618 720 FNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTH 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1672 ILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQElQGHMGQLEQQL 1751
Cdd:TIGR00618 800 LLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQE-QAKIIQLSDKL 878
|
....*...
gi 189458802 1752 QGLHRKVG 1759
Cdd:TIGR00618 879 NGINQIKI 886
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
818-1052 |
1.15e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 818 AERTRAEQEWDAVARQLAQAEQEgQASLERQKVAHEEEVNRLQEKwekerswlQQELDKTLETLERERAELETKLREQQT 897
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKE-LAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 898 EMEAIRAQREEERSQADSALYQMQLETEKERVSLL---ETLLRTQKELADASQQLERLRQDMKIQKlKEQETTGMLQAQL 974
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLlspEDFLDAVRRLQYLKYLAPARREQAEELR-ADLAELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 975 QETQQELKEAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHddsqrlvKEEIEEKVKVAQECSRIQKELEKENASLA 1052
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAEL-------AAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1789-2094 |
1.23e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 44.12 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1789 REQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELE 1868
Cdd:pfam07888 28 RAELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELS 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1869 VEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQE 1948
Cdd:pfam07888 108 ASSEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEEL 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1949 EAAVSQAEALQEALSKAQAA---LQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQH 2025
Cdd:pfam07888 188 RSLSKEFQELRNSLAQRDTQvlqLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQR 267
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2026 HEVTQHLQQELCQKKEELRQLLEKAGA-RRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEE 2094
Cdd:pfam07888 268 DRTQAELHQARLQAAQLTLQLADASLAlREGRARWAQERETLQQSAEADKDRIEKLSAELQRLEERLQEE 337
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1756-2097 |
1.43e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1756 RKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSAL 1835
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1836 QAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEART 1915
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEE 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1916 LQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQA 1995
Cdd:COG4372 166 LAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELE 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1996 TLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETR 2075
Cdd:COG4372 246 EDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELA 325
|
330 340
....*....|....*....|..
gi 189458802 2076 RLLESLKELQLTVAQREEEILM 2097
Cdd:COG4372 326 KKLELALAILLAELADLLQLLL 347
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1027-1444 |
1.44e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1027 IEEKVKVAQECSRIQKELEKENASLalslVEKEKRLLILQEADSVRQQELSSLRQDIQEAQEGQRelgvqvelLRQEVKE 1106
Cdd:PRK04863 285 LEEALELRRELYTSRRQLAAEQYRL----VEMARELAELNEAESDLEQDYQAASDHLNLVQTALR--------QQEKIER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1107 KEADFVAREAQLLEELEASRVAEQQLRASlwaqEAKATQLQLQLRSTESQL----EALVAEQQPENQAQAQLASLcsvlq 1182
Cdd:PRK04863 353 YQADLEELEERLEEQNEVVEEADEQQEEN----EARAEAAEEEVDELKSQLadyqQALDVQQTRAIQYQQAVQAL----- 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1183 qalgsacesrpelrgggDSAPTLWG-PDPDQNGASRLFKRWslptALSPEAVALALQKLHQDVWKARQARDDLrDQVQKL 1261
Cdd:PRK04863 424 -----------------ERAKQLCGlPDLTADNAEDWLEEF----QAKEQEATEELLSLEQKLSVAQAAHSQF-EQAYQL 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1262 VQRLTDtEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLeSELRDLHETAASLQSRLRQAELQKMEAQNDRELLQAS 1341
Cdd:PRK04863 482 VRKIAG-EVSRSEAWDVARELLRRLREQRHLAEQLQQLRMRL-SELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQL 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1342 KEKLSAQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQT 1421
Cdd:PRK04863 560 QEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLER 639
|
410 420
....*....|....*....|...
gi 189458802 1422 LSNREREVETLQAEVQELEKQRE 1444
Cdd:PRK04863 640 ERELTVERDELAARKQALDEEIE 662
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
632-940 |
1.60e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 632 SRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHL 711
Cdd:COG4372 52 EELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQR 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 712 EQLHQDAERQEETLARAVQEKEALVRERAALEVRLQAVERDRQDLTehvlglrsaKEQLESNLFEAQQQNSVIQVTKGQL 791
Cdd:COG4372 132 KQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS---------EAEAEQALDELLKEANRNAEKEEEL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 792 EVQIQTIIQAKEVIQGEVKCLKLELDAERTRAEQEWDAVARQLAQAEQEGQASLERQKVAHEEEVNRLQEKWEKERSWLQ 871
Cdd:COG4372 203 AEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAA 282
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 872 QELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQK 940
Cdd:COG4372 283 LELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLL 351
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1805-2010 |
1.90e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1805 AQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDL 1884
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1885 RAESREHEKAVLALQ------------------QRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRR 1946
Cdd:COG3883 92 ARALYRSGGSVSYLDvllgsesfsdfldrlsalSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189458802 1947 QEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEA 2010
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
853-986 |
2.07e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.28 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 853 EEEVNRLQEKWEKerswLQQELDKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQmqletekervsll 932
Cdd:PRK00409 515 KEKLNELIASLEE----LERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQ------------- 577
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 189458802 933 etLLRTQKELADASQQLERLRQDMKIQKLKEQEttgmlqaqLQETQQELKEAAQ 986
Cdd:PRK00409 578 --AIKEAKKEADEIIKELRQLQKGGYASVKAHE--------LIEARKRLNKANE 621
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1734-1955 |
2.21e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1734 QERIQELQGHMGQLEQQLQGLHRKVGETSLllthrEQETATLQQHLQEakeqgelreqvLQGQLEEAQRDLAQRDHELET 1813
Cdd:COG3206 181 EEQLPELRKELEEAEAALEEFRQKNGLVDL-----SEEAKLLLQQLSE-----------LESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1814 LRQekqqtqdqeesmKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1893
Cdd:COG3206 245 LRA------------QLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQ 312
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1894 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE--------NQYSRRQEEAAVSQA 1955
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREvevarelyESLLQRLEEARLAEA 382
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1560-1758 |
2.40e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1560 KVESQQKMITELEGQREMQRVALTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE 1639
Cdd:COG4942 28 ELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1640 QLAQALERKGQ----ELVLQKERIQVLEDQRTLQTKILEEDLEQIKhSLRERSQELASQWQLVHERADDGKSPSKGQRGS 1715
Cdd:COG4942 108 ELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 189458802 1716 LEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGLHRKV 1758
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
1765-2199 |
2.42e-03 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 42.97 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1765 LTHREQETATLQQHLQEAKE--QGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEEsmkLKTSALQAALEQA 1842
Cdd:COG5278 78 LEPYEEARAEIDELLAELRSltADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALAL---VRSGEGKALMDEI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1843 HATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQ 1922
Cdd:COG5278 155 RARLLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALEL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1923 AQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQA 2002
Cdd:COG5278 235 LAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAA 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2003 SARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLK 2082
Cdd:COG5278 315 AAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2083 ELQLTVAQREEEILMLREASSPRHRALPAEKPALQPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISS 2162
Cdd:COG5278 395 IAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAAL 474
|
410 420 430
....*....|....*....|....*....|....*..
gi 189458802 2163 LQEITMFLQASVLERESEQQRLQEELVLSRQALEEQQ 2199
Cdd:COG5278 475 AALAAAAAALAEAEAAAALAAAAALSLALALAALLLA 511
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
602-823 |
2.55e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 602 LGALNEALALDKVELNQQLLQLEQENQSLCSRVEAAEQLRSALQVDLAEAERRREALWEKKTQLETQLQKAEEAGAELQA 681
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 682 ELRGTREEKEELKDKLSE---AHHQQETATAHLEQLHQ----DAERQEETLARAVQEK----EALVRERAALEVRLQAVE 750
Cdd:COG4942 91 EIAELRAELEAQKEELAEllrALYRLGRQPPLALLLSPedflDAVRRLQYLKYLAPARreqaEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189458802 751 RDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAERTRA 823
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
653-1163 |
2.65e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 653 RRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEahhqqetatahLEQLHQDAERQEETLARAVQEK 732
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEK-----------LEKEVKELEELKEEIEELEKEL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 733 EALVRERAALEVRLQAVERDRQDLTEHVLGLRSAKEQLESnLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCL 812
Cdd:PRK03918 248 ESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 813 KLEL-DAERTRAEQEWdavarqLAQAEQEGQASLERQKVAHE--EEVNRLQEKWEKERSWLQ----QELDKTLETLERER 885
Cdd:PRK03918 327 EERIkELEEKEERLEE------LKKKLKELEKRLEELEERHElyEEAKAKKEELERLKKRLTgltpEKLEKELEELEKAK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 886 AELETKLREQQTEMEAIRaQREEERSQADSALYQMQLE--------TEKERVSLLET----LLRTQKELADASQQLERLR 953
Cdd:PRK03918 401 EEIEEEISKITARIGELK-KEIKELKKAIEELKKAKGKcpvcgrelTEEHRKELLEEytaeLKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 954 Q-----DMKIQKLKEQETTGMLQAQLQETQQELK----EAAQQHRDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVK 1024
Cdd:PRK03918 480 KelrelEKVLKKESELIKLKELAEQLKELEEKLKkynlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1025 EEIEEKVKVAQECSRIQKELEKENASlalSLVEKEKRLLILQEADSvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEV 1104
Cdd:PRK03918 560 ELEKKLDELEEELAELLKELEELGFE---SVEELEERLKELEPFYN-EYLELKDAEKELEREEKELKKLEEELDKAFEEL 635
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 1105 KEKEADFVAREAQL--------LEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAE 1163
Cdd:PRK03918 636 AETEKRLEELRKELeelekkysEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEE 702
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1723-1981 |
2.82e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.06 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1723 LRDKEKEVECQQERIQELQGHMGQLEQQLQGlhrKVGETSLLLTHREQETATLQQHLQEAKEQGELR-EQVLQGQLEEAQ 1801
Cdd:TIGR00927 627 LGDLSKGDVAEAEHTGERTGEEGERPTEAEG---ENGEESGGEAEQEGETETKGENESEGEIPAERKgEQEGEGEIEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1802 RDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATlkERQGELEEHREQVRRLQEELEVEGRQVRALEEVl 1881
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEG--EAEGKHEVETEGDRKETEHEGETEAEGKEDEDE- 780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1882 GDLRA-ESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQE 1960
Cdd:TIGR00927 781 GEIQAgEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDG 860
|
250 260
....*....|....*....|.
gi 189458802 1961 ALSKAQAALQEKEQSLLEQAE 1981
Cdd:TIGR00927 861 GDSEEEEEEEEEEEEEEEEEE 881
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
798-927 |
3.11e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.89 E-value: 3.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 798 IIQAKEVIQGEVkcLKLE-----LDAERTRAEQEWDAVARQLAQAEQEgQASLERQKvaheeevNRLQEKWEKERSWLQQ 872
Cdd:PRK00409 504 IEEAKKLIGEDK--EKLNeliasLEELERELEQKAEEAEALLKEAEKL-KEELEEKK-------EKLQEEEDKLLEEAEK 573
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 873 ELDKTLETLERERAELETKLREQQTemEAIRAQREEERSQADSALYQMQLETEKE 927
Cdd:PRK00409 574 EAQQAIKEAKKEADEIIKELRQLQK--GGYASVKAHELIEARKRLNKANEKKEKK 626
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1591-1831 |
3.35e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.69 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1591 ERSQELQAQSSQLHELEnhsthlakelqerdQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQVLEDQRTLQT 1670
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQ--------------QQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDEL 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1671 KILEEDLEQIKHSLRERSQELA------SQWQLVHE-RADDGKSPSKGQrgslehlklilrdkekEVECQQERIQELQGH 1743
Cdd:PHA02562 244 LNLVMDIEDPSAALNKLNTAAAkikskiEQFQKVIKmYEKGGVCPTCTQ----------------QISEGPDRITKIKDK 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1744 MGQLEQQLQGLHRKVGEtsllLTHREQETATLQQHLQEAKEQGELREQVLQG----------QLEEAQRDLAQRDHELET 1813
Cdd:PHA02562 308 LKELQHSLEKLDTAIDE----LEEIMDEFNEQSKKLLELKNKISTNKQSLITlvdkakkvkaAIEELQAEFVDNAEELAK 383
|
250
....*....|....*...
gi 189458802 1814 LRQEKQQTQDQEESMKLK 1831
Cdd:PHA02562 384 LQDELDKIVKTKSELVKE 401
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1211-1545 |
3.84e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.20 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1211 DQNGASRLFKRWSLPTALSPEAVALALQKlhQDVWKARQARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQ 1290
Cdd:COG4372 2 DRLGEKVGKARLSLFGLRPKTGILIAALS--EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1291 EEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAqaqadaaavlE 1370
Cdd:COG4372 80 EELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAER----------E 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1371 EDLRTARSALKLKNEELES-ERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQELEKQREMQKAA 1449
Cdd:COG4372 150 EELKELEEQLESLQEELAAlEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1450 LELLSLDLKKRSREVDLQQEQIQELEQCRSVLEHLPMAVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQV 1529
Cdd:COG4372 230 KLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSL 309
|
330
....*....|....*.
gi 189458802 1530 IESQRGQIQDLKKQLG 1545
Cdd:COG4372 310 IGALEDALLAALLELA 325
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1873-2112 |
4.17e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1873 QVRALEEVLGDLRAESREHEKAVLALQQRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEE 1949
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKAllkQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1950 AavsQAEALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVT 2029
Cdd:COG4942 101 A---QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2030 QHLQQELCQKKEELRQLLEKAGARRSQENGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRAL 2109
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKLPW 257
|
...
gi 189458802 2110 PAE 2112
Cdd:COG4942 258 PVS 260
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
256-772 |
4.52e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 256 EKEAHEKSQELMQLKSHGDLEKAELQdRVTELSALLTQSQKQNEDYEKMVKALRETMEILETNHAELMEHEASLSRNAQE 335
Cdd:PRK03918 206 LREINEISSELPELREELEKLEKEVK-ELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 336 ---------EKLSLQQVIKAITQALASVEEEdtvtqssghEDSLQSDCNGLSQfdpqdpdraltlVQSVLTRRQQAVQDL 406
Cdd:PRK03918 285 lkelkekaeEYIKLSEFYEEYLDELREIEKR---------LSRLEEEINGIEE------------RIKELEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 407 RQQLSGCQEAMSFLQQQHDQWEEegraLREKLQKLTGERDALAGQTVG-LQGEVDSLSRERELLQKARGELQQQLEVLEQ 485
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEE----AKAKKEELERLKKRLTGLTPEkLEKELEELEKAKEEIEEEISKITARIGELKK 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 486 EAWRLRRMNMELQlqgdSAQGE------KLEQQEELHLAVR---ERERLQETLVGLEAKQSE----------------SL 540
Cdd:PRK03918 420 EIKELKKAIEELK----KAKGKcpvcgrELTEEHRKELLEEytaELKRIEKELKEIEEKERKlrkelrelekvlkkesEL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 541 SELLTLREALESSRLEGELLKQERVEVAAALARA-EQSIVELSGSENSLKAEVADLRAAAVKLGALNEALalDKVELNQQ 619
Cdd:PRK03918 496 IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKlKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKL--DELEEELA 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 620 LLQLEQENQSLCSRVEAAEQLRSALQ-----VDLAEAERRREALWEKKTQLETQLQKAEEAGAELQAELRGTREEKEELK 694
Cdd:PRK03918 574 ELLKELEELGFESVEELEERLKELEPfyneyLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELE 653
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189458802 695 DKLSEAHHqqetatahlEQLHQDAERQEETLARAVQEKEalvreraALEVRLQAVERDRQDLTEHVLGLRSAKEQLES 772
Cdd:PRK03918 654 KKYSEEEY---------EELREEYLELSRELAGLRAELE-------ELEKRREEIKKTLEKLKEELEEREKAKKELEK 715
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1487-1709 |
4.62e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1487 AVQEREQKLSVQRDQIRELENDREAQRSVLEHQLLDLEQKAQVIESQRGQIQDLKKQLGTLECLALELEESHHKVESQQK 1566
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1567 MITELEGQ--REMQRVALTHLTLDLEERSQELQAQSSQ--LHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLA 1642
Cdd:COG4942 101 AQKEELAEllRALYRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189458802 1643 QALERKGQELVLQKERIQVLEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPS 1709
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| PRK12705 |
PRK12705 |
hypothetical protein; Provisional |
1759-1896 |
4.69e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 237178 [Multi-domain] Cd Length: 508 Bit Score: 42.00 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1759 GETSLLLTHREQETATLQQHLQEAkeQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQA- 1837
Cdd:PRK12705 19 GVLVVLLKKRQRLAKEAERILQEA--QKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDAr 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189458802 1838 ---------ALEQAHATLKERQGELEEHREQVRrlQEELEVEG-RQVRALEEVLGDLRAESrEHEKAVL 1896
Cdd:PRK12705 97 aekldnlenQLEEREKALSARELELEELEKQLD--NELYRVAGlTPEQARKLLLKLLDAEL-EEEKAQR 162
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1278-2199 |
4.70e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 4.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1278 ELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVA 1357
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1358 EAQAQADAaavLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNREREVETLQAEVQ 1437
Cdd:pfam01576 86 EEEERSQQ---LQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1438 ELEKQ-REMQKAALELLSLDLKKRSREVDlqqeqiqeleqcrsvlehlpmaVQEREQKLSVQRDQIRELENDREAQRSVL 1516
Cdd:pfam01576 163 EFTSNlAEEEEKAKSLSKLKNKHEAMISD----------------------LEERLKKEEKGRQELEKAKRKLEGESTDL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1517 EHQLLDLEQKAQVIESQRGQIQD-LKKQLGTLECLALELEESHHKVESQQKMITELEGQREMQRVALTHLTLDLEERSQE 1595
Cdd:pfam01576 221 QEQIAELQAQIAELRAQLAKKEEeLQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEE 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1596 LQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQE-QLAQALERKGQELVLQKERIQvledqrtlQTKILE 1674
Cdd:pfam01576 301 LEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEaQLQEMRQKHTQALEELTEQLE--------QAKRNK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1675 EDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQGHMGQLEQQLQGL 1754
Cdd:pfam01576 373 ANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEA 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1755 HRKVGETSLLLTHREQETATLQQHLQEAKEQG----------ELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQTQDQ 1824
Cdd:pfam01576 453 EGKNIKLSKDVSSLESQLQDTQELLQEETRQKlnlstrlrqlEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKK 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1825 EESMKLKTSA-------LQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVL- 1896
Cdd:pfam01576 533 LEEDAGTLEAleegkkrLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAe 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1897 --ALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEA---LSKAQAALQE 1971
Cdd:pfam01576 613 ekAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNvheLERSKRALEQ 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1972 KEQSLLEQ-AELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELcqkKEELRQLLEKA 2050
Cdd:pfam01576 693 QVEEMKTQlEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAEL---EDERKQRAQAV 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2051 GARRSQENGIQEkqsLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPLPA-QQELERLQ 2129
Cdd:pfam01576 770 AAKKKLELDLKE---LEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLQLQ 846
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189458802 2130 TALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASV--LERESEQQRLQEELVLSRQALEEQQ 2199
Cdd:pfam01576 847 EDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIaqLEEELEEEQSNTELLNDRLRKSTLQ 918
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
931-1175 |
4.80e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 4.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 931 LLETLLRTQKELADASQQLERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQH---RDDLAAFQKDKLDLQKQVE 1007
Cdd:COG4372 4 LGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELeqlEEELEQARSELEQLEEELE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1008 DLMSQLVAHDDSQRLVKEEIEEKVKVAQECSRIQKELEKENASLALSLVEKEKRLLILQEADSVRQQELSSLRQDIQEAQ 1087
Cdd:COG4372 84 ELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1088 EGQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPE 1167
Cdd:COG4372 164 EELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALE 243
|
....*...
gi 189458802 1168 NQAQAQLA 1175
Cdd:COG4372 244 LEEDKEEL 251
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
864-1150 |
4.89e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 42.15 E-value: 4.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 864 EKERSWLQQELDKTlETLERErAELEtKLREQqtemeaIRAQREEERSQADSALYQMQLETEKE----------RVSLLE 933
Cdd:PLN03229 416 ERKVNMKKREAVKT-PVRELE-GEVE-KLKEQ------ILKAKESSSKPSELALNEMIEKLKKEidleyteaviAMGLQE 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 934 TLLRTQKELADASQQLERLRQDM--KIQKLKEQETTGMLQA----QLQETQQELKEAaqqHRDDLAAFQKD-----KLDL 1002
Cdd:PLN03229 487 RLENLREEFSKANSQDQLMHPVLmeKIEKLKDEFNKRLSRApnylSLKYKLDMLNEF---SRAKALSEKKSkaeklKAEI 563
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1003 QKQVEDLMSQLVAHDDSQRLVKEEIEEKVKVA--------QECSRIQKELEKENAS------LALSLVEKEKRLLILQEA 1068
Cdd:PLN03229 564 NKKFKEVMDRPEIKEKMEALKAEVASSGASSGdeldddlkEKVEKMKKEIELELAGvlksmgLEVIGVTKKNKDTAEQTP 643
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1069 DSVRQQELSSLRQDIQEAQE---GQRELGVQVELLRQEVKEKEADFVAREAQLLEELEASrvAEQQLRASLWAQEAKATQ 1145
Cdd:PLN03229 644 PPNLQEKIESLNEEINKKIErviRSSDLKSKIELLKLEVAKASKTPDVTEKEKIEALEQQ--IKQKIAEALNSSELKEKF 721
|
....*
gi 189458802 1146 LQLQL 1150
Cdd:PLN03229 722 EELEA 726
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
740-951 |
5.17e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 740 AALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEAQQQNSVIQVTKGQLEVQIQTIIQAKEVIQGEVKCLKLELDAE 819
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 820 RTRAEQEWDAVARQLAQAEQEGQAS-----LERQKVAHEEEVNRLQEKWEKERSWLQQELDKTLETLERERAELETKLRE 894
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPplallLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 895 QQTEMEAIRAQR---EEERSQADSALYQMQLETEKERVSlLETLLRTQKELADASQQLER 951
Cdd:COG4942 176 LEALLAELEEERaalEALKAERQKLLARLEKELAELAAE-LAELQQEAEELEALIARLEA 234
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
949-1428 |
5.32e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 949 LERLRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQHrDDLAAFQKDKLDLQKQVEDLMSQLVAHDDSQRLVKEEIE 1028
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKE-EEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1029 ekvkvaqecsriQKELEKENASLALSLVEKEKRLLILQEadsvRQQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKE 1108
Cdd:COG4717 127 ------------LLPLYQELEALEAELAELPERLEELEE----RLEELRELEEELEELEAELAELQEELEELLEQLSLAT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1109 ADfvaREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQPENQAQAQLASLCSVLQQALGSA 1188
Cdd:COG4717 191 EE---ELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGS 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1189 CESRPELRGGgdsAPTLWGPDPDQNGASRLFKRWSLPTALSPEAVALALQKLHQDVWKARQARDDLRDQVQK-LVQRLTD 1267
Cdd:COG4717 268 LLSLILTIAG---VLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPeELLELLD 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1268 TEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLR-QAELQKMEAQNDRELLQASKEKLS 1346
Cdd:COG4717 345 RIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1347 AQVEHLQACVAEAQAQADAAAVLEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLAL-LAQTLSNR 1425
Cdd:COG4717 425 LDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWAALkLALELLEE 504
|
...
gi 189458802 1426 ERE 1428
Cdd:COG4717 505 ARE 507
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
24-581 |
5.83e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.23 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 24 LALQQQMAENQAASW-RKLKNSQEAQKRQATLVRKLQAKVLQYRSWCQDLEKRLEATGGLIPQRWESVEEPN--LEQLLI 100
Cdd:COG1196 216 RELKEELKELEAELLlLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQaeEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 101 RLEEEQQRCESLVEVNTELRLHMEKADVVNKALQEDVEKLTVDWSRARDELVRKESQWRMEQEFFKGYLRGEH------- 173
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLeaeaela 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 174 ---GRLLNLWREVVTFRRHFLKMKSATDRDLTELKAEHARLSGSLLTCCLRLTLRAQSRESSGSGRTEESEPARLLLLVA 250
Cdd:COG1196 376 eaeEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 251 KTQALEKEAHEKSQELMQLKSHGDLEKAELQDRVTELSALLTQSQKQNEDYEKMVKALRET--MEILETNHAELMEHEAS 328
Cdd:COG1196 456 EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLagLRGLAGAVAVLIGVEAA 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 329 LSRNAQEEKLSLQQVIKAITQALASVEEEDTVTQSSGHEDSLQsdcngLSQFDPQDPDRALTLVQSVLTRRQQAVQDLRQ 408
Cdd:COG1196 536 YEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP-----LDKIRARAALAAALARGAIGAAVDLVASDLRE 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 409 QLSGCQEAMSFLQQQHDQWEEEGRALREKLQKLTGERDALAGQTVGLQGEVDSLSRERELLQKARGELQQQLEVLEqeaw 488
Cdd:COG1196 611 ADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE---- 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 489 RLRRMNMELQLQGDSAQGEKLEQQEELHLAVRERERLQETLVGLEAKQSESLSELLTLREALESSRLEGELLKQERVEVA 568
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
570
....*....|...
gi 189458802 569 AALARAEQSIVEL 581
Cdd:COG1196 767 RELERLEREIEAL 779
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
1734-2093 |
5.98e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 42.09 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1734 QERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVlqgQLEEAQRDLAQRDHELET 1813
Cdd:PRK10246 432 HGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARI---KDLEAQRAQLQAGQPCPL 508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1814 LRQEKQQTQDQEESMKLKTSALQ-AALEQAHATLKER----QGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRA-- 1886
Cdd:PRK10246 509 CGSTSHPAVEAYQALEPGVNQSRlDALEKEVKKLGEEgaalRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAVCAsl 588
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1887 ---------------ESREHEKAVLALQQRCAEQAQ--EHEAEARTLQDSWLQAQATLTEQEQELAALRAENQ-----YS 1944
Cdd:PRK10246 589 nitlqpqddiqpwldAQEEHERQLRLLSQRHELQGQiaAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDeeaswLA 668
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1945 RRQEEAAVSQAEALQealskaQAALQEKEQSLleqAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQ 2024
Cdd:PRK10246 669 TRQQEAQSWQQRQNE------LTALQNRIQQL---TPLLETLPQSDDLPHSEETVALDNWRQVHEQCLSLHSQLQTLQQQ 739
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2025 HHEVTQHLQQELCQ------------KKEELRQLLEKAGARRSQengiQEKQSLEQERQEETRRLLESLKELQLTVAQRE 2092
Cdd:PRK10246 740 DVLEAQRLQKAQAQfdtalqasvfddQQAFLAALLDEETLTQLE----QLKQNLENQRQQAQTLVTQTAQALAQHQQHRP 815
|
.
gi 189458802 2093 E 2093
Cdd:PRK10246 816 D 816
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
1582-2036 |
6.03e-03 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 41.82 E-value: 6.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1582 LTHLTLDLEERSQELQAQSSQLHELENHSTHLAKELQERDQEVTSQRQQIDELQKQQEQLAQALERKGQELVLQKERIQV 1661
Cdd:COG5278 71 LTGDESFLEPYEEARAEIDELLAELRSLTADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALALVRSGEGKAL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1662 LEDQRTLQTKILEEDLEQIKHSLRERSQELASQWQLVHERADDGKSPSKGQRGSLEHLKLILRDKEKEVECQQERIQELQ 1741
Cdd:COG5278 151 MDEIRARLLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALA 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1742 GHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQQT 1821
Cdd:COG5278 231 ALELLAALALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAA 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1822 QDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEKAVLALQQR 1901
Cdd:COG5278 311 AAAAAAAAAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVEL 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1902 CAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSLLEQAE 1981
Cdd:COG5278 391 EVLAIAAAAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAA 470
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1982 LSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQEL 2036
Cdd:COG5278 471 VAALAALAAAAAALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAALAAAL 525
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
930-1127 |
6.08e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 6.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 930 SLLETLLR-TQKELADASQQLERLRQDMKIQK--LKEQE-TTGMLQAQLQETQQELKEAAQQHRDDLAAFQKDKLDLQKQ 1005
Cdd:PHA02562 170 KLNKDKIReLNQQIQTLDMKIDHIQQQIKTYNknIEEQRkKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMD 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1006 VEDLMSQLVAHDDSQRLVKEEIEEKVKVA------QECSRIQKELEKEN---ASLALSLVEKEKRLLILQEAdsvrQQEL 1076
Cdd:PHA02562 250 IEDPSAALNKLNTAAAKIKSKIEQFQKVIkmyekgGVCPTCTQQISEGPdriTKIKDKLKELQHSLEKLDTA----IDEL 325
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 189458802 1077 SSLRQDIQEAQEGQRELGVQVELLRQEVK--EKEADFVAREaqlLEELEASRV 1127
Cdd:PHA02562 326 EEIMDEFNEQSKKLLELKNKISTNKQSLItlVDKAKKVKAA---IEELQAEFV 375
|
|
| COG5283 |
COG5283 |
Phage-related tail protein [Mobilome: prophages, transposons]; |
642-743 |
6.54e-03 |
|
Phage-related tail protein [Mobilome: prophages, transposons];
Pssm-ID: 444094 [Multi-domain] Cd Length: 747 Bit Score: 41.76 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 642 SALQVDLAEAERRREALWEKKTQLET-------QLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQL 714
Cdd:COG5283 10 KPFKSALESAKQRVAALAQALKALEAptralarALERAKQAAARLQTKYNKLRQSLQRLRQALDQAGIDTRQLSAAQRRL 89
|
90 100 110
....*....|....*....|....*....|....*.
gi 189458802 715 HQDAE-------RQEETLARAVQEKEALVRERAALE 743
Cdd:COG5283 90 RSSLEqtnrqleRQQQRLARLGARQDRLKAARARLQ 125
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1249-1391 |
6.66e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.10 E-value: 6.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1249 QARDDLRDQVQKLVQRLTDTEAQKSQVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELRDLHETAASLQSRLRQAELQK 1328
Cdd:PRK09039 53 SALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQVS 132
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 189458802 1329 MEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAVLEEDL-RTARSALKLKNEELESER 1391
Cdd:PRK09039 133 ARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLgRRLNVALAQRVQELNRYR 196
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1877-2199 |
6.73e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.43 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1877 LEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAE 1956
Cdd:COG4372 4 LGEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1957 ALQEALSKAQAALQEKEQSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQAlqhhEVTQHLQQEL 2036
Cdd:COG4372 84 ELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAERE----EELKELEEQL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2037 CQKKEELRQLlekagarrsqenGIQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPAL 2116
Cdd:COG4372 160 ESLQEELAAL------------EQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 2117 QPLPAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERESEQQRLQEELVLSRQALE 2196
Cdd:COG4372 228 EAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAAL 307
|
...
gi 189458802 2197 EQQ 2199
Cdd:COG4372 308 SLI 310
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1793-1940 |
6.76e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 6.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1793 LQGQLEEAQRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHR--EQVRRLQEELEVE 1870
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRnnKEYEALQKEIESL 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1871 GRQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAE 1940
Cdd:COG1579 102 KRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1674-1969 |
6.95e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 6.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1674 EEDLEQIKHSLRERSQELA---SQWQLVHERADDGKSPSKGQRGSLEHLKLILRDK--EKEVECQQER---------IQE 1739
Cdd:PRK04863 836 EAELRQLNRRRVELERALAdheSQEQQQRSQLEQAKEGLSALNRLLPRLNLLADETlaDRVEEIREQLdeaeeakrfVQQ 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1740 LQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQGELREQVLQGQLEEAQRDLAQRDHELETLRQEKQ 1819
Cdd:PRK04863 916 HGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRLE 995
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1820 QTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGrqVRALEEVLGDLRAESREHEKAVLALQ 1899
Cdd:PRK04863 996 QAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLG--VPADSGAEERARARRDELHARLSANR 1073
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1900 QRCAE---QAQEHEAEARTLQDSWLQAQATLTEQEQELAALRA----------ENQYSRR--QEEAAVSQAEALQEALSK 1964
Cdd:PRK04863 1074 SRRNQlekQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAgwcavlrlvkDNGVERRlhRRELAYLSADELRSMSDK 1153
|
....*
gi 189458802 1965 AQAAL 1969
Cdd:PRK04863 1154 ALGAL 1158
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1734-2073 |
7.40e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1734 QERIQELQGHMGQLEQQLQGLHRKVGETSLLLTHREQETATLQQHLQEAKEQgelrEQVLQGQLEEAQRDLAQRDHELET 1813
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEE----LEELNEQLQAAQAELAQAQEELES 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1814 LRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEGRQVRALEEVLGDLRAESREHEK 1893
Cdd:COG4372 106 LQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQAL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1894 AVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQEQELAALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKE 1973
Cdd:COG4372 186 DELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELEL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1974 QSLLEQAELSHTLEASTAALQATLDTCQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGAR 2053
Cdd:COG4372 266 AILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQL 345
|
330 340
....*....|....*....|
gi 189458802 2054 RSQENGIQEKQSLEQERQEE 2073
Cdd:COG4372 346 LLVGLLDNDVLELLSKGAEA 365
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
1780-1912 |
8.23e-03 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 41.54 E-value: 8.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1780 QEAKEQGELREQVLQGQLEeaqRDLAQRDHELETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELE--EHR 1857
Cdd:PTZ00491 666 AAARHQAELLEQEARGRLE---RQKMHDKAKAEEQRTKLLELQAESAAVESSGQSRAEALAEAEARLIEAEAEVEqaELR 742
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 1858 EQVRRLQEELEVEGRQVRALEEVlgdlraesrEHEKAVLALQQRCAEQAQEHEAE 1912
Cdd:PTZ00491 743 AKALRIEAEAELEKLRKRQELEL---------EYEQAQNELEIAKAKELADIEAT 788
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
638-947 |
8.79e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.26 E-value: 8.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 638 EQLRSALQVDLAEAERRRealweKKTQLETQLQKAEEAGAELQAELRGTREEKEELKDKLSEAHHQQETATAHLEQLHQD 717
Cdd:pfam17380 299 ERLRQEKEEKAREVERRR-----KLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIRQEEIAME 373
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 718 AE--RQEETLARAVQEKEALVRER--AALEVRLQAVERDRQDLTEHVLGLRSAKEQLESNLFEaqqqnsvIQVTKGQLEV 793
Cdd:pfam17380 374 ISrmRELERLQMERQQKNERVRQEleAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQRE-------VRRLEEERAR 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 794 QIQTIIQAKEVIQGEVKCLKLElDAERTRAEQEWDAVARQLAQAEQEGQASLERQKvaheEEVNRLQEKWEKERSWLQQE 873
Cdd:pfam17380 447 EMERVRLEEQERQQQVERLRQQ-EEERKRKKLELEKEKRDRKRAEEQRRKILEKEL----EERKQAMIEEERKRKLLEKE 521
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189458802 874 L-DKTLETLERERAELETKLREQQTEMEAIRAQREEERSQADSALYQMQLETEKERVSLLETLLRTQKELADASQ 947
Cdd:pfam17380 522 MeERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYEATTP 596
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
952-1165 |
9.50e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 9.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 952 LRQDMKIQKLKEQETTGMLQAQLQETQQELKEAAQQhrddLAAFQKDK--LDLQKQVEDLMSQLVAHDDSQRLVKEEIEE 1029
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAA----LEEFRQKNglVDLSEEAKLLLQQLSELESQLAEARAELAE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189458802 1030 KVKVAQECSRIQKELEKENASLALSLVEKEKRllilqeadsvrqQELSSLRQDIQEAQEGQRELGVQVELLRQEVKEKEA 1109
Cdd:COG3206 238 AEARLAALRAQLGSGPDALPELLQSPVIQQLR------------AQLAELEAELAELSARYTPNHPDVIALRAQIAALRA 305
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 189458802 1110 DFVAREAQLLEELEASRVAEQQLRASLWAQEAKATQLQLQLRSTESQLEALVAEQQ 1165
Cdd:COG3206 306 QLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVE 361
|
|
| |
