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Conserved domains on  [gi|119709839|ref|NP_777479|]
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a disintegrin and metalloprotease domain 6 [Mus musculus]

Protein Classification

disintegrin and metalloproteinase domain-containing protein( domain architecture ID 10480592)

disintegrin and metalloproteinase domain-containing protein also contains an ADAM domain and belongs to the ADAM family of membrane-anchored metalloproteases; ADAMs (A Disintegrin And Metalloprotease) are glycoproteins that play roles in cell signaling, cell fusion, and cell-cell interactions

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ACR smart00608
ADAM Cysteine-Rich Domain;
503-638 3.73e-49

ADAM Cysteine-Rich Domain;


:

Pssm-ID: 214743  Cd Length: 137  Bit Score: 169.08  E-value: 3.73e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   503 QDGTPCSEE-GYCYKGNCTDRNIQCMEIFGVSAKNANIKCYD-INKQRFRFGHCTRaeESLTFNACADQDKLCGRLQCTN 580
Cdd:smart00608   1 QDGTPCDNGqGYCYNGRCPTRDNQCQALFGPGAKVAPDSCYEeLNTKGDRFGNCGR--ENGTYIPCAPEDVKCGKLQCTN 78
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 119709839   581 VTNLPFLQEHVSFHQSVISGVTCFGLDEHRGTETaDAGLVRHGTPCSRGKFCDRGACN 638
Cdd:smart00608  79 VSELPLLGEHATVIYSNIGGLVCWSLDYHLGTDP-DIGMVKDGTKCGPGKVCINGQCV 135
ZnMc_adamalysin_II_like cd04269
Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom ...
217-406 8.97e-44

Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions.


:

Pssm-ID: 239797 [Multi-domain]  Cd Length: 194  Bit Score: 156.24  E-value: 8.97e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 217 IKGHFQATHSVYSASGGDkLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFSQDfRVPGGQAHTFYE---RV 293
Cdd:cd04269    3 VELVVVVDNSLYKKYGSN-LSKVRQRVIEIVNIVDSIYRPLNIRVVLVGLEIWTDKDKISVS-GDAGETLNRFLDwkrSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 294 FYAHFRPDAGAIINKNSP-GDDAVNPAERSICSPSALICLGQ-HGRNPLFLSIIITNRVGRSLGLKHDEGYCICQrRNTC 371
Cdd:cd04269   81 LLPRKPHDNAQLLTGRDFdGNTVGLAYVGGMCSPKYSGGVVQdHSRNLLLFAVTMAHELGHNLGMEHDDGGCTCG-RSTC 159
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 119709839 372 IMFKNP-QLTDAFSNCSLAEISNILNTPDlMPCLFY 406
Cdd:cd04269  160 IMAPSPsSLTDAFSNCSYEDYQKFLSRGG-GQCLLN 194
Disintegrin pfam00200
Disintegrin;
427-499 7.12e-30

Disintegrin;


:

Pssm-ID: 459709  Cd Length: 74  Bit Score: 112.72  E-value: 7.12e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119709839  427 DNNEQCDCGSQKACYSDPCC-GNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCSGSKFICPDD 499
Cdd:pfam00200   1 EEGEECDCGSLEECTNDPCCdAKTCKLKPGAQCSSGPCCTNCQFKPAGTVCRPSKDECDLPEYCNGTSAECPPD 74
Pep_M12B_propep pfam01562
Reprolysin family propeptide; This region is the propeptide for members of peptidase family ...
49-166 4.41e-18

Reprolysin family propeptide; This region is the propeptide for members of peptidase family M12B. The propeptide contains a sequence motif similar to the "cysteine switch" of the matrixins. This motif is found at the C terminus of the alignment but is not well aligned.


:

Pssm-ID: 460254  Cd Length: 128  Bit Score: 80.82  E-value: 4.41e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   49 EVVIPRK--EIYHTKGLQAQRL----LSYSLRFRGQRHIIHLRRKTLIWPRHLLLTTQDDQGALQMEYPFFPVDCYYIGY 122
Cdd:pfam01562   1 EVVIPVRldPSRRRRSLASESTyldtLSYRLAAFGKKFHLHLTPNRLLLAPGFTVTYYLDGGTGVESPPVQTDHCYYQGH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 119709839  123 LEGILQSMVTVDTCyGGLSGVIKLDNLTYEIKPL----NDSQSFEHLV 166
Cdd:pfam01562  81 VEGHPDSSVALSTC-SGLRGFIRTENEEYLIEPLekysREEGGHPHVV 127
 
Name Accession Description Interval E-value
ACR smart00608
ADAM Cysteine-Rich Domain;
503-638 3.73e-49

ADAM Cysteine-Rich Domain;


Pssm-ID: 214743  Cd Length: 137  Bit Score: 169.08  E-value: 3.73e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   503 QDGTPCSEE-GYCYKGNCTDRNIQCMEIFGVSAKNANIKCYD-INKQRFRFGHCTRaeESLTFNACADQDKLCGRLQCTN 580
Cdd:smart00608   1 QDGTPCDNGqGYCYNGRCPTRDNQCQALFGPGAKVAPDSCYEeLNTKGDRFGNCGR--ENGTYIPCAPEDVKCGKLQCTN 78
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 119709839   581 VTNLPFLQEHVSFHQSVISGVTCFGLDEHRGTETaDAGLVRHGTPCSRGKFCDRGACN 638
Cdd:smart00608  79 VSELPLLGEHATVIYSNIGGLVCWSLDYHLGTDP-DIGMVKDGTKCGPGKVCINGQCV 135
ZnMc_adamalysin_II_like cd04269
Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom ...
217-406 8.97e-44

Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions.


Pssm-ID: 239797 [Multi-domain]  Cd Length: 194  Bit Score: 156.24  E-value: 8.97e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 217 IKGHFQATHSVYSASGGDkLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFSQDfRVPGGQAHTFYE---RV 293
Cdd:cd04269    3 VELVVVVDNSLYKKYGSN-LSKVRQRVIEIVNIVDSIYRPLNIRVVLVGLEIWTDKDKISVS-GDAGETLNRFLDwkrSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 294 FYAHFRPDAGAIINKNSP-GDDAVNPAERSICSPSALICLGQ-HGRNPLFLSIIITNRVGRSLGLKHDEGYCICQrRNTC 371
Cdd:cd04269   81 LLPRKPHDNAQLLTGRDFdGNTVGLAYVGGMCSPKYSGGVVQdHSRNLLLFAVTMAHELGHNLGMEHDDGGCTCG-RSTC 159
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 119709839 372 IMFKNP-QLTDAFSNCSLAEISNILNTPDlMPCLFY 406
Cdd:cd04269  160 IMAPSPsSLTDAFSNCSYEDYQKFLSRGG-GQCLLN 194
ADAM_CR pfam08516
ADAM cysteine-rich; ADAMs are membrane-anchored proteases that proteolytically modify cell ...
504-607 1.90e-35

ADAM cysteine-rich; ADAMs are membrane-anchored proteases that proteolytically modify cell surface and extracellular matrix (ECM) in order to alter cell behaviour. It has been shown that the cysteine-rich domain of ADAM13 regulates the protein's metalloprotease activity.


Pssm-ID: 462504  Cd Length: 105  Bit Score: 129.66  E-value: 1.90e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  504 DGTPCSE-EGYCYKGNCTDRNIQCMEIFGVSAKNANIKCY-DINKQRFRFGHCTRaeESLTFNACADQDKLCGRLQCTNV 581
Cdd:pfam08516   1 DGTPCNNgQAYCYNGRCRDRDQQCQELFGKGAKSAPDACYeEVNSKGDRFGNCGR--TNGGYVKCEKRDVLCGKLQCTNV 78
                          90       100
                  ....*....|....*....|....*.
gi 119709839  582 TNLPFLQEHVSFHQSVISGVTCFGLD 607
Cdd:pfam08516  79 KELPLLGEHATVIYTNINGVTCWGTD 104
Disintegrin pfam00200
Disintegrin;
427-499 7.12e-30

Disintegrin;


Pssm-ID: 459709  Cd Length: 74  Bit Score: 112.72  E-value: 7.12e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119709839  427 DNNEQCDCGSQKACYSDPCC-GNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCSGSKFICPDD 499
Cdd:pfam00200   1 EEGEECDCGSLEECTNDPCCdAKTCKLKPGAQCSSGPCCTNCQFKPAGTVCRPSKDECDLPEYCNGTSAECPPD 74
DISIN smart00050
Homologues of snake disintegrins; Snake disintegrins inhibit the binding of ligands to ...
429-501 1.61e-28

Homologues of snake disintegrins; Snake disintegrins inhibit the binding of ligands to integrin receptors. They contain a 'RGD' sequence, identical to the recognition site of many adhesion proteins. Molecules containing both disintegrin and metalloprotease domains are known as ADAMs.


Pssm-ID: 214490  Cd Length: 75  Bit Score: 108.93  E-value: 1.61e-28
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119709839   429 NEQCDCGSQKACySDPCC-GNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCSGSKFICPDDTY 501
Cdd:smart00050   3 GEECDCGSPKEC-TDPCCdPATCKLKPGAQCASGPCCDNCKFKPAGTLCRPSVDECDLPEYCNGTSADCPPDPY 75
Pep_M12B_propep pfam01562
Reprolysin family propeptide; This region is the propeptide for members of peptidase family ...
49-166 4.41e-18

Reprolysin family propeptide; This region is the propeptide for members of peptidase family M12B. The propeptide contains a sequence motif similar to the "cysteine switch" of the matrixins. This motif is found at the C terminus of the alignment but is not well aligned.


Pssm-ID: 460254  Cd Length: 128  Bit Score: 80.82  E-value: 4.41e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   49 EVVIPRK--EIYHTKGLQAQRL----LSYSLRFRGQRHIIHLRRKTLIWPRHLLLTTQDDQGALQMEYPFFPVDCYYIGY 122
Cdd:pfam01562   1 EVVIPVRldPSRRRRSLASESTyldtLSYRLAAFGKKFHLHLTPNRLLLAPGFTVTYYLDGGTGVESPPVQTDHCYYQGH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 119709839  123 LEGILQSMVTVDTCyGGLSGVIKLDNLTYEIKPL----NDSQSFEHLV 166
Cdd:pfam01562  81 VEGHPDSSVALSTC-SGLRGFIRTENEEYLIEPLekysREEGGHPHVV 127
Reprolysin pfam01421
Reprolysin (M12B) family zinc metalloprotease; The members of this family are enzymes that ...
223-405 1.86e-04

Reprolysin (M12B) family zinc metalloprotease; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family are also known as adamalysins. Most members of this family are snake venom endopeptidases, but there are also some mammalian proteins such as Swiss:P78325, and fertilin. Fertilin and closely related proteins appear to not have some active site residues and may not be active enzymes.


Pssm-ID: 426256 [Multi-domain]  Cd Length: 200  Bit Score: 43.44  E-value: 1.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  223 ATHSVYSASGGDkLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFsqdfRVPGGQAHTFY------ERVFYA 296
Cdd:pfam01421   9 VDKQLFQKMGSD-TTVVRQRVFQVVNLVNSIYKELNIRVVLVGLEIWTDEDKI----DVSGDANDTLRnflkwrQEYLKK 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  297 HFRPDAGAIINKNSPGDDAVNPA-ERSICSPSALICLGQHGR-NPLFLSIIITNRVGRSLGLKHDE--GYCICQRRNTCI 372
Cdd:pfam01421  84 RKPHDVAQLLSGVEFGGTTVGAAyVGGMCSLEYSGGVNEDHSkNLESFAVTMAHELGHNLGMQHDDfnGGCKCPPGGGCI 163
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 119709839  373 MfkNPQLT----DAFSNCSLAEISNILNTPDLMpCLF 405
Cdd:pfam01421 164 M--NPSAGssfpRKFSNCSQEDFEQFLTKQKGA-CLF 197
 
Name Accession Description Interval E-value
ACR smart00608
ADAM Cysteine-Rich Domain;
503-638 3.73e-49

ADAM Cysteine-Rich Domain;


Pssm-ID: 214743  Cd Length: 137  Bit Score: 169.08  E-value: 3.73e-49
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   503 QDGTPCSEE-GYCYKGNCTDRNIQCMEIFGVSAKNANIKCYD-INKQRFRFGHCTRaeESLTFNACADQDKLCGRLQCTN 580
Cdd:smart00608   1 QDGTPCDNGqGYCYNGRCPTRDNQCQALFGPGAKVAPDSCYEeLNTKGDRFGNCGR--ENGTYIPCAPEDVKCGKLQCTN 78
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 119709839   581 VTNLPFLQEHVSFHQSVISGVTCFGLDEHRGTETaDAGLVRHGTPCSRGKFCDRGACN 638
Cdd:smart00608  79 VSELPLLGEHATVIYSNIGGLVCWSLDYHLGTDP-DIGMVKDGTKCGPGKVCINGQCV 135
ZnMc_adamalysin_II_like cd04269
Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom ...
217-406 8.97e-44

Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions.


Pssm-ID: 239797 [Multi-domain]  Cd Length: 194  Bit Score: 156.24  E-value: 8.97e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 217 IKGHFQATHSVYSASGGDkLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFSQDfRVPGGQAHTFYE---RV 293
Cdd:cd04269    3 VELVVVVDNSLYKKYGSN-LSKVRQRVIEIVNIVDSIYRPLNIRVVLVGLEIWTDKDKISVS-GDAGETLNRFLDwkrSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839 294 FYAHFRPDAGAIINKNSP-GDDAVNPAERSICSPSALICLGQ-HGRNPLFLSIIITNRVGRSLGLKHDEGYCICQrRNTC 371
Cdd:cd04269   81 LLPRKPHDNAQLLTGRDFdGNTVGLAYVGGMCSPKYSGGVVQdHSRNLLLFAVTMAHELGHNLGMEHDDGGCTCG-RSTC 159
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 119709839 372 IMFKNP-QLTDAFSNCSLAEISNILNTPDlMPCLFY 406
Cdd:cd04269  160 IMAPSPsSLTDAFSNCSYEDYQKFLSRGG-GQCLLN 194
ADAM_CR pfam08516
ADAM cysteine-rich; ADAMs are membrane-anchored proteases that proteolytically modify cell ...
504-607 1.90e-35

ADAM cysteine-rich; ADAMs are membrane-anchored proteases that proteolytically modify cell surface and extracellular matrix (ECM) in order to alter cell behaviour. It has been shown that the cysteine-rich domain of ADAM13 regulates the protein's metalloprotease activity.


Pssm-ID: 462504  Cd Length: 105  Bit Score: 129.66  E-value: 1.90e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  504 DGTPCSE-EGYCYKGNCTDRNIQCMEIFGVSAKNANIKCY-DINKQRFRFGHCTRaeESLTFNACADQDKLCGRLQCTNV 581
Cdd:pfam08516   1 DGTPCNNgQAYCYNGRCRDRDQQCQELFGKGAKSAPDACYeEVNSKGDRFGNCGR--TNGGYVKCEKRDVLCGKLQCTNV 78
                          90       100
                  ....*....|....*....|....*.
gi 119709839  582 TNLPFLQEHVSFHQSVISGVTCFGLD 607
Cdd:pfam08516  79 KELPLLGEHATVIYTNINGVTCWGTD 104
Disintegrin pfam00200
Disintegrin;
427-499 7.12e-30

Disintegrin;


Pssm-ID: 459709  Cd Length: 74  Bit Score: 112.72  E-value: 7.12e-30
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119709839  427 DNNEQCDCGSQKACYSDPCC-GNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCSGSKFICPDD 499
Cdd:pfam00200   1 EEGEECDCGSLEECTNDPCCdAKTCKLKPGAQCSSGPCCTNCQFKPAGTVCRPSKDECDLPEYCNGTSAECPPD 74
DISIN smart00050
Homologues of snake disintegrins; Snake disintegrins inhibit the binding of ligands to ...
429-501 1.61e-28

Homologues of snake disintegrins; Snake disintegrins inhibit the binding of ligands to integrin receptors. They contain a 'RGD' sequence, identical to the recognition site of many adhesion proteins. Molecules containing both disintegrin and metalloprotease domains are known as ADAMs.


Pssm-ID: 214490  Cd Length: 75  Bit Score: 108.93  E-value: 1.61e-28
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 119709839   429 NEQCDCGSQKACySDPCC-GNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCSGSKFICPDDTY 501
Cdd:smart00050   3 GEECDCGSPKEC-TDPCCdPATCKLKPGAQCASGPCCDNCKFKPAGTLCRPSVDECDLPEYCNGTSADCPPDPY 75
Pep_M12B_propep pfam01562
Reprolysin family propeptide; This region is the propeptide for members of peptidase family ...
49-166 4.41e-18

Reprolysin family propeptide; This region is the propeptide for members of peptidase family M12B. The propeptide contains a sequence motif similar to the "cysteine switch" of the matrixins. This motif is found at the C terminus of the alignment but is not well aligned.


Pssm-ID: 460254  Cd Length: 128  Bit Score: 80.82  E-value: 4.41e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839   49 EVVIPRK--EIYHTKGLQAQRL----LSYSLRFRGQRHIIHLRRKTLIWPRHLLLTTQDDQGALQMEYPFFPVDCYYIGY 122
Cdd:pfam01562   1 EVVIPVRldPSRRRRSLASESTyldtLSYRLAAFGKKFHLHLTPNRLLLAPGFTVTYYLDGGTGVESPPVQTDHCYYQGH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 119709839  123 LEGILQSMVTVDTCyGGLSGVIKLDNLTYEIKPL----NDSQSFEHLV 166
Cdd:pfam01562  81 VEGHPDSSVALSTC-SGLRGFIRTENEEYLIEPLekysREEGGHPHVV 127
Reprolysin pfam01421
Reprolysin (M12B) family zinc metalloprotease; The members of this family are enzymes that ...
223-405 1.86e-04

Reprolysin (M12B) family zinc metalloprotease; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family are also known as adamalysins. Most members of this family are snake venom endopeptidases, but there are also some mammalian proteins such as Swiss:P78325, and fertilin. Fertilin and closely related proteins appear to not have some active site residues and may not be active enzymes.


Pssm-ID: 426256 [Multi-domain]  Cd Length: 200  Bit Score: 43.44  E-value: 1.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  223 ATHSVYSASGGDkLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFsqdfRVPGGQAHTFY------ERVFYA 296
Cdd:pfam01421   9 VDKQLFQKMGSD-TTVVRQRVFQVVNLVNSIYKELNIRVVLVGLEIWTDEDKI----DVSGDANDTLRnflkwrQEYLKK 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119709839  297 HFRPDAGAIINKNSPGDDAVNPA-ERSICSPSALICLGQHGR-NPLFLSIIITNRVGRSLGLKHDE--GYCICQRRNTCI 372
Cdd:pfam01421  84 RKPHDVAQLLSGVEFGGTTVGAAyVGGMCSLEYSGGVNEDHSkNLESFAVTMAHELGHNLGMQHDDfnGGCKCPPGGGCI 163
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 119709839  373 MfkNPQLT----DAFSNCSLAEISNILNTPDLMpCLF 405
Cdd:pfam01421 164 M--NPSAGssfpRKFSNCSQEDFEQFLTKQKGA-CLF 197
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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