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Conserved domains on  [gi|124249333|ref|NP_766090|]
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DDB1- and CUL4-associated factor 15 isoform 1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DCAF15_WD40 pfam14939
DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are ...
48-259 6.95e-118

DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are substrate receptors for the Cul4-Ddb1 Ubiquitin Ligase. There are 18 different factors, the majority of which are WD40-repeat-proteins.


:

Pssm-ID: 464387  Cd Length: 206  Bit Score: 349.71  E-value: 6.95e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333   48 QLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDD---FSFYIYHLYWWEFNVHSKLKLVR 124
Cdd:pfam14939   1 QKSQRLFRKLPPRLCLSLKDIVPESFLQAGHIFLGFTKCGQFLLSYTSDCDDEDslsFGNYKYHLYWWEFNPHSKLRKVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333  125 QVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSAngmlmnmmmMSDENHRDIYISTVAVPPRGRCAACQDASRAHP 204
Cdd:pfam14939  81 EVRLFGDEEIYSDLYLTICQWPSDSSKLVVHGFNTTSS---------MSDEEHRDIYITIVTVPSLSPCKDCKRVADSHP 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 124249333  205 GDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVH 259
Cdd:pfam14939 152 EEDNALCLRHGLTIHTKYEVVYPYPTFQPSVSLKCDNVVLLNTGNFLHALAVDVD 206
DCAF15-CTD cd20913
C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal ...
387-637 1.96e-69

C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.


:

Pssm-ID: 411023  Cd Length: 224  Bit Score: 224.86  E-value: 1.96e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 387 INYTKLHYVLQSGEG--TEPEDEFEDDK--ISLPFVVTDLRGRNLRPMRERTD--MQGQYLTVEQLTLDFEYVINEVIRH 460
Cdd:cd20913    1 VKKVVRRYSEVDDEIviTDIEDDSLLSGqhIELPLEVHGLGYQQLQMVSNAKAdkLTEPQVIVTQRSLDIEQFINEVAQK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 461 D-ATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPAPTEE---GQLRPKTYHTSLKVAWDLNTGIFETVSVGDL 536
Cdd:cd20913   81 LcAEWGKKFWSCSDYDIEIVDVCPLSGDVICLLVILIQALESPEESkldCSNRRKLYETSCLFTWNISTGQYRTLDVGDL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 537 TEVKG-QTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGRkcpswaghlilpwipgmldvrsvlgsewhpa 615
Cdd:cd20913  161 TEVPPeQTSSQEWNPARKEASRLRKKWLVPQSSKRSVRVLTNESVFKGR------------------------------- 209
                        250       260
                 ....*....|....*....|..
gi 124249333 616 mageagcSLKVLADSERYTWIV 637
Cdd:cd20913  210 -------SLDNLIDPFHYSAIV 224
 
Name Accession Description Interval E-value
DCAF15_WD40 pfam14939
DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are ...
48-259 6.95e-118

DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are substrate receptors for the Cul4-Ddb1 Ubiquitin Ligase. There are 18 different factors, the majority of which are WD40-repeat-proteins.


Pssm-ID: 464387  Cd Length: 206  Bit Score: 349.71  E-value: 6.95e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333   48 QLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDD---FSFYIYHLYWWEFNVHSKLKLVR 124
Cdd:pfam14939   1 QKSQRLFRKLPPRLCLSLKDIVPESFLQAGHIFLGFTKCGQFLLSYTSDCDDEDslsFGNYKYHLYWWEFNPHSKLRKVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333  125 QVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSAngmlmnmmmMSDENHRDIYISTVAVPPRGRCAACQDASRAHP 204
Cdd:pfam14939  81 EVRLFGDEEIYSDLYLTICQWPSDSSKLVVHGFNTTSS---------MSDEEHRDIYITIVTVPSLSPCKDCKRVADSHP 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 124249333  205 GDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVH 259
Cdd:pfam14939 152 EEDNALCLRHGLTIHTKYEVVYPYPTFQPSVSLKCDNVVLLNTGNFLHALAVDVD 206
DCAF15-NTD cd20917
N-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the N-terminal ...
35-259 6.53e-94

N-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the N-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.


Pssm-ID: 411024  Cd Length: 225  Bit Score: 288.45  E-value: 6.53e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333  35 HVLKQLERVKISGQLSP-------RLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSF--- 104
Cdd:cd20917    1 NLLQKLLNREITGSFSRhrrskseRLFRKIPPRLCFPLKDILPDEGLLLGHVFLGFTKCGQFLLSYTLSSDDDDSSLfpl 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 105 YIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSangmlmnmmmmSDENHRDIYIST 184
Cdd:cd20917   81 YKYRLHWWLFVPGQPLRKVSEVRLFGDEGIYDDLKITVCQWPDDPSKLVVYGYSAES-----------SPEESRDCYITI 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124249333 185 VAVPPRGRCAACQDASRAH-PGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVH 259
Cdd:cd20917  150 TAVPSLSNCPDCKQLALSNwDSCSRFRCLKHGFTVHTKYELVPPFPPFDPSVSLKLPGVVVLNTGNFLHVLSVSLE 225
DCAF15-CTD cd20913
C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal ...
387-637 1.96e-69

C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.


Pssm-ID: 411023  Cd Length: 224  Bit Score: 224.86  E-value: 1.96e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 387 INYTKLHYVLQSGEG--TEPEDEFEDDK--ISLPFVVTDLRGRNLRPMRERTD--MQGQYLTVEQLTLDFEYVINEVIRH 460
Cdd:cd20913    1 VKKVVRRYSEVDDEIviTDIEDDSLLSGqhIELPLEVHGLGYQQLQMVSNAKAdkLTEPQVIVTQRSLDIEQFINEVAQK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 461 D-ATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPAPTEE---GQLRPKTYHTSLKVAWDLNTGIFETVSVGDL 536
Cdd:cd20913   81 LcAEWGKKFWSCSDYDIEIVDVCPLSGDVICLLVILIQALESPEESkldCSNRRKLYETSCLFTWNISTGQYRTLDVGDL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 537 TEVKG-QTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGRkcpswaghlilpwipgmldvrsvlgsewhpa 615
Cdd:cd20913  161 TEVPPeQTSSQEWNPARKEASRLRKKWLVPQSSKRSVRVLTNESVFKGR------------------------------- 209
                        250       260
                 ....*....|....*....|..
gi 124249333 616 mageagcSLKVLADSERYTWIV 637
Cdd:cd20913  210 -------SLDNLIDPFHYSAIV 224
 
Name Accession Description Interval E-value
DCAF15_WD40 pfam14939
DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are ...
48-259 6.95e-118

DDB1-and CUL4-substrate receptor 15, WD repeat; DCAFs, Ddb1- and Cul4-associated factors, are substrate receptors for the Cul4-Ddb1 Ubiquitin Ligase. There are 18 different factors, the majority of which are WD40-repeat-proteins.


Pssm-ID: 464387  Cd Length: 206  Bit Score: 349.71  E-value: 6.95e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333   48 QLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDD---FSFYIYHLYWWEFNVHSKLKLVR 124
Cdd:pfam14939   1 QKSQRLFRKLPPRLCLSLKDIVPESFLQAGHIFLGFTKCGQFLLSYTSDCDDEDslsFGNYKYHLYWWEFNPHSKLRKVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333  125 QVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSAngmlmnmmmMSDENHRDIYISTVAVPPRGRCAACQDASRAHP 204
Cdd:pfam14939  81 EVRLFGDEEIYSDLYLTICQWPSDSSKLVVHGFNTTSS---------MSDEEHRDIYITIVTVPSLSPCKDCKRVADSHP 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 124249333  205 GDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVH 259
Cdd:pfam14939 152 EEDNALCLRHGLTIHTKYEVVYPYPTFQPSVSLKCDNVVLLNTGNFLHALAVDVD 206
DCAF15-NTD cd20917
N-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the N-terminal ...
35-259 6.53e-94

N-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the N-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.


Pssm-ID: 411024  Cd Length: 225  Bit Score: 288.45  E-value: 6.53e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333  35 HVLKQLERVKISGQLSP-------RLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSF--- 104
Cdd:cd20917    1 NLLQKLLNREITGSFSRhrrskseRLFRKIPPRLCFPLKDILPDEGLLLGHVFLGFTKCGQFLLSYTLSSDDDDSSLfpl 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 105 YIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSangmlmnmmmmSDENHRDIYIST 184
Cdd:cd20917   81 YKYRLHWWLFVPGQPLRKVSEVRLFGDEGIYDDLKITVCQWPDDPSKLVVYGYSAES-----------SPEESRDCYITI 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 124249333 185 VAVPPRGRCAACQDASRAH-PGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVH 259
Cdd:cd20917  150 TAVPSLSNCPDCKQLALSNwDSCSRFRCLKHGFTVHTKYELVPPFPPFDPSVSLKLPGVVVLNTGNFLHVLSVSLE 225
DCAF15-CTD cd20913
C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal ...
387-637 1.96e-69

C-terminal domain of DDB1- and CUL4-associated factor 15; This model represents the C-terminal domain of DCAF15 (DDB1- and CUL4-associated factor 15), the cullin RING ligase substrate receptor/adaptor that forms a complex with CUL4A or CUL4B, as part of the Rbx-Cul4-DDA1-DDB1-DCAF15 E3 ubiquitin ligase that is responsible for the proteasome degradation of certain proteins. Aryl sulfonamide anticancer agents such as indisulam, tasisulam, E7820, and chloroquinoxaline have been shown to recruit the essential mRNA-splicing factor RBM39 to DCAF15. These agents appear to promote binding of DCAF15 to the RNA-recognition motif (RRM) of RBM39, which suggests that derivatives of the aryl-sulfonamides may be used to target other RRM-containing proteins. Cell proliferation is inhibited by these aryl sulfonamides by causing degradation of RBM39, which leads to aberrant processing of pre-mRNA in hundreds of genes, primarily reflected by intron retention and exon skipping, thus collectively referred to as splicing inhibitor sulfonamides, or SPLAMs.


Pssm-ID: 411023  Cd Length: 224  Bit Score: 224.86  E-value: 1.96e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 387 INYTKLHYVLQSGEG--TEPEDEFEDDK--ISLPFVVTDLRGRNLRPMRERTD--MQGQYLTVEQLTLDFEYVINEVIRH 460
Cdd:cd20913    1 VKKVVRRYSEVDDEIviTDIEDDSLLSGqhIELPLEVHGLGYQQLQMVSNAKAdkLTEPQVIVTQRSLDIEQFINEVAQK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 461 D-ATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPAPTEE---GQLRPKTYHTSLKVAWDLNTGIFETVSVGDL 536
Cdd:cd20913   81 LcAEWGKKFWSCSDYDIEIVDVCPLSGDVICLLVILIQALESPEESkldCSNRRKLYETSCLFTWNISTGQYRTLDVGDL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124249333 537 TEVKG-QTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGRkcpswaghlilpwipgmldvrsvlgsewhpa 615
Cdd:cd20913  161 TEVPPeQTSSQEWNPARKEASRLRKKWLVPQSSKRSVRVLTNESVFKGR------------------------------- 209
                        250       260
                 ....*....|....*....|..
gi 124249333 616 mageagcSLKVLADSERYTWIV 637
Cdd:cd20913  210 -------SLDNLIDPFHYSAIV 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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