|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
271-573 |
3.03e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.00 E-value: 3.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 271 INTLTRQKELLLQklstFEETNRTLRDL------LREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVE 344
Cdd:TIGR02168 202 LKSLERQAEKAER----YKELKAELRELelallvLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVS 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 345 ELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK 424
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 425 ESLKKAIRAQKERAEKSEEYAEQLHvQLADKdlyVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTL 504
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLE-TLRSK---VAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA 433
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 505 E-EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKS 573
Cdd:TIGR02168 434 ElKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
270-570 |
5.66e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.85 E-value: 5.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 270 DINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQE 349
Cdd:TIGR02168 685 KIEELEEKIAELEKALAELRKELEELEEELEQL--RKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 350 IQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKqkgdRDKESLKK 429
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLE----RRIAATER 838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 430 AIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWrsrynqvVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMR 509
Cdd:TIGR02168 839 RLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL-------LNERASLEEALALLRSELEELSEELRELESKRS 911
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 310750404 510 E---DRDSLVERLHRQTAEYSAFKLE--------NERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDN 570
Cdd:TIGR02168 912 ElrrELEELREKLAQLELRLEGLEVRidnlqerlSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
270-608 |
2.67e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 2.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 270 DINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQE 349
Cdd:COG1196 247 ELEELEAELEELEAELAELEAELEELRLELEEL--ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 350 IQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK 429
Cdd:COG1196 325 LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 430 AIRAQKERAEKSEEYAEQLHVQLADKdlyvAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMR 509
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEAL----AELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 510 EDRDSLVERLHRQTAEYSAFKLENERLKASFAP-MEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRL-EADEVAA 587
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFLEGVKAAlLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVvEDDEVAA 560
|
330 340
....*....|....*....|.
gi 310750404 588 QLERCDKENKILKITEAKLAE 608
Cdd:COG1196 561 AAIEYLKAAKAGRATFLPLDK 581
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
379-636 |
1.80e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.77 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 379 RSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRdkesLKKAIRAQKERAEKSEEYAEQLHVQLADKDLY 458
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD----ASRKIGEIEKEIEQLEQEEEKLKERLEELEED 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 459 VAEALSTLESWRSRYNQVVKEKGDLELeiivlndrvtDLVNQQQTLEEKMREDRDSLVERLhrqTAEYSAFKLENERLKA 538
Cdd:TIGR02169 746 LSSLEQEIENVKSELKELEARIEELEE----------DLHKLEEALNDLEARLSHSRIPEI---QAELSKLEEEVSRIEA 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 539 SFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLErcdKENKILKITEAKLAECQDQLQGYER 618
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKE---ELEEELEELEAALRDLESRLGDLKK 889
|
250
....*....|....*...
gi 310750404 619 KNIDLTAIISDLRSRVRD 636
Cdd:TIGR02169 890 ERDELEAQLRELERKIEE 907
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
198-490 |
4.49e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.61 E-value: 4.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 198 EHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTC-TDINTLTR 276
Cdd:TIGR02169 222 EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVkEKIGELEA 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 277 QKELLLQKLstfEETNRTLRDLL-REQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKA 355
Cdd:TIGR02169 302 EIASLERSI---AEKERELEDAEeRLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 356 QAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELkqkgDRDKESLKKAIRAQK 435
Cdd:TIGR02169 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINEL----EEEKEDKALEIKKQE 454
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 310750404 436 ERAEKSEEYAEQLHVQLADKdlyvaealstleswRSRYNQVVKEKGDLELEIIVL 490
Cdd:TIGR02169 455 WKLEQLAADLSKYEQELYDL--------------KEEYDRVEKELSKLQRELAEA 495
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
144-653 |
2.49e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.83 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 144 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKK 223
Cdd:TIGR02168 275 EVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 224 HLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQH 303
Cdd:TIGR02168 355 SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 304 CKEDSERLMEqqgaLLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ------AQ 377
Cdd:TIGR02168 435 LKELQAELEE----LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEgfsegvKA 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 378 LRSKEAENSRLCMQIKNLERSGNQHKAEVEA---------IMEQLKELKQKGDRDKESLK--------KAIRAQKERAEK 440
Cdd:TIGR02168 511 LLKNQSGLSGILGVLSELISVDEGYEAAIEAalggrlqavVVENLNAAKKAIAFLKQNELgrvtflplDSIKGTEIQGND 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 441 SEEYAEQLHVQLADKDL--YVAEALSTLESWRSRYnqVVKEKGDLELEIIVLNDR----VT---DLVN------------ 499
Cdd:TIGR02168 591 REILKNIEGFLGVAKDLvkFDPKLRKALSYLLGGV--LVVDDLDNALELAKKLRPgyriVTldgDLVRpggvitggsakt 668
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 500 QQQTLE-----EKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQ 574
Cdd:TIGR02168 669 NSSILErrreiEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEER 748
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 575 VMKTRLE----ADEVAAQLERCDKENKILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRVRDWQKGSHELTRAGAR 650
Cdd:TIGR02168 749 IAQLSKEltelEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLES 828
|
...
gi 310750404 651 IPR 653
Cdd:TIGR02168 829 LER 831
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
193-632 |
3.46e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 3.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 193 ELAETEHENTVLRHNIERMKEEKD--FTILQKKHLQ-----QEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEkq 265
Cdd:TIGR04523 219 QISELKKQNNQLKDNIEKKQQEINekTTEISNTQTQlnqlkDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSE-- 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 266 mtctdINTLTRQKElllqklstfEETNRTLRDLLREQHCK-EDSERLMEQQGALLKRLAEA----DSEKARLLLLLQDKD 340
Cdd:TIGR04523 297 -----ISDLNNQKE---------QDWNKELKSELKNQEKKlEEIQNQISQNNKIISQLNEQisqlKKELTNSESENSEKQ 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 341 KEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLErsgnQHKAEVEAIMEQLKELKQKG 420
Cdd:TIGR04523 363 RELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQ----QEKELLEKEIERLKETIIKN 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 421 DRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLEswrsrynQVVKEKGDLELEIIVLNDRVTDLVNQ 500
Cdd:TIGR04523 439 NSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLE-------QKQKELKSKEKELKKLNEEKKELEEK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 501 QQTLEEKMredrDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASvKNYEGMIDNYKSqVMKTRL 580
Cdd:TIGR04523 512 VKDLTKKI----SSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKN-KEIEELKQTQKS-LKKKQE 585
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 310750404 581 EADEVAAQLERCDKE-NKILKITEAKLAECQDQLQGYERKNIDLTAIISDLRS 632
Cdd:TIGR04523 586 EKQELIDQKEKEKKDlIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKS 638
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
209-651 |
6.11e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 6.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 209 ERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTF 288
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQ 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 289 EETNRTLRdLLREQHCKEDSERLMEQQGALLKRLAEADSekaRLLLLLQDKDKEVEELLQEIQCEkaqaktASELSKSME 368
Cdd:pfam15921 172 IEQLRKMM-LSHEGVLQEIRSILVDFEEASGKKIYEHDS---MSTMHFRSLGSAISKILRELDTE------ISYLKGRIF 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 369 SMRGHLQAqLRSKEAENSRLCMQIKN--LERSGNQHKAEVEAIMEQLKELKQKGDrdkeslkkAIRAQKERAEKSEEYAE 446
Cdd:pfam15921 242 PVEDQLEA-LKSESQNKIELLLQQHQdrIEQLISEHEVEITGLTEKASSARSQAN--------SIQSQLEIIQEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 447 QLHV-QLADKDLYVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEK---MREDRDSLVERLHRQ 522
Cdd:pfam15921 313 SMYMrQLSDLESTVSQLRSELREAKRMYEDKIEE---LEKQLVLANSELTEARTERDQFSQEsgnLDDQLQKLLADLHKR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 523 TAEYSAFKLENERL-------KASFAPMEDKLNQAHLEVQQLKASVKNY----EGMIDNYKSQVMKTRLEADEVAAQLER 591
Cdd:pfam15921 390 EKELSLEKEQNKRLwdrdtgnSITIDHLRRELDDRNMEVQRLEALLKAMksecQGQMERQMAAIQGKNESLEKVSSLTAQ 469
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 592 CDKENKILKITEAKLAECQDQLQGYERKNIDLTAiisDLRSRVRDWQKGSHELTRAGARI 651
Cdd:pfam15921 470 LESTKEMLRKVVEELTAKKMTLESSERTVSDLTA---SLQEKERAIEATNAEITKLRSRV 526
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
311-569 |
6.13e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 6.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 311 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-----SELSKSMESMRGHLQAQLRSKEAEN 385
Cdd:pfam12128 267 YKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAvakdrSELEALEDQHGAFLDADIETAAADQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 386 SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADkdlyvaeALST 465
Cdd:pfam12128 347 EQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAED-------DLQA 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 466 LES-WRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ-TLEEKMR-EDRDSLVER----LHRQTAEYSAFKLENERLKA 538
Cdd:pfam12128 420 LESeLREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATaTPELLLQlENFDERIERareeQEAANAEVERLQSELRQARK 499
|
250 260 270
....*....|....*....|....*....|.
gi 310750404 539 SFAPMEDKLNQAHLEVQQLKASVKNYEGMID 569
Cdd:pfam12128 500 RRDQASEALRQASRRLEERQSALDELELQLF 530
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
194-591 |
6.36e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.33 E-value: 6.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 194 LAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINT 273
Cdd:pfam05483 263 LEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNK 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 274 LTRQKELLLqklSTFEETNRTLRDLLR-EQHCKEDSErlmEQQGALLKRLAEADSEKARLLLLLQDKDKEVEEL---LQE 349
Cdd:pfam05483 343 AKAAHSFVV---TEFEATTCSLEELLRtEQQRLEKNE---DQLKIITMELQKKSSELEEMTKFKNNKEVELEELkkiLAE 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 350 IQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQL---------------- 413
Cdd:pfam05483 417 DEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELekeklknieltahcdk 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 414 -----KELKQKGDRDKESLKKA------IRAQKERAEKSEEYAEQLHVQLADKDLYVAEAL-STLESWRSRYNQVVKEKG 481
Cdd:pfam05483 497 lllenKELTQEASDMTLELKKHqediinCKKQEERMLKQIENLEEKEMNLRDELESVREEFiQKGDEVKCKLDKSEENAR 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 482 DLELEIIVLNDRVTDLVNQQQTLEEKMrEDRDSLVERLHRqtaEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKasv 561
Cdd:pfam05483 577 SIEYEVLKKEKQMKILENKCNNLKKQI-ENKNKNIEELHQ---ENKALKKKGSAENKQLNAYEIKVNKLELELASAK--- 649
|
410 420 430
....*....|....*....|....*....|
gi 310750404 562 KNYEGMIDNYKSQVMKTRLEADEVAAQLER 591
Cdd:pfam05483 650 QKFEEIIDNYQKEIEDKKISEEKLLEEVEK 679
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
337-550 |
1.10e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 337 QDKDKEVEELLQEIQcekAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKEL 416
Cdd:COG4942 19 ADAAAEAEAELEQLQ---QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 417 KQKGDRDKESLKKAIRAQKERAEKSE-------EYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIV 489
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPlalllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 310750404 490 LNDRVTDLVNQQQTLEEKMREdRDSLVERLHRQTAEYSAfklENERLKASFAPMEDKLNQA 550
Cdd:COG4942 176 LEALLAELEEERAALEALKAE-RQKLLARLEKELAELAA---ELAELQQEAEELEALIARL 232
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
317-507 |
1.32e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.23 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 317 ALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLE 396
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 397 --RSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYN 474
Cdd:COG4717 130 lyQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLA 209
|
170 180 190
....*....|....*....|....*....|...
gi 310750404 475 QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEK 507
Cdd:COG4717 210 ELEEELEEAQEELEELEEELEQLENELEAAALE 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
191-441 |
2.56e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 191 AHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTD 270
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 271 INTLTRQKELLLQKLSTFEETNRtLRDLLREQHCKEDSERLMeqqgaLLKRLAEADSEKArlllllqdkdkevEELlqei 350
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPP-LALLLSPEDFLDAVRRLQ-----YLKYLAPARREQA-------------EEL---- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 351 qceKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKA 430
Cdd:COG4942 156 ---RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
250
....*....|.
gi 310750404 431 IRAQKERAEKS 441
Cdd:COG4942 233 EAEAAAAAERT 243
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
319-608 |
2.79e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 2.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 319 LKRLAEADSEKARLLLLLQDKDKEVEEL---------LQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLC 389
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKADEAkkkaeekkkADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEA 1475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 390 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDK--ESLKKAIRAQK-ERAEKSEEYAEQLHVQLADkDLYVAEALSTL 466
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKkaDEAKKAEEAKKaDEAKKAEEAKKADEAKKAE-EKKKADELKKA 1554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 467 ESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQqqtLEEKMREDRDSLVERLHRQTAEySAFKLENERLKASFAPMEDk 546
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK---AEEARIEEVMKLYEEEKKMKAE-EAKKAEEAKIKAEELKKAE- 1629
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 310750404 547 lnqahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKiLKITEAKLAE 608
Cdd:PTZ00121 1630 ------EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK-KKAEEAKKAE 1684
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
192-614 |
4.03e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 4.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 192 HELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECL--MSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQmtct 269
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLekLLQLLPLYQELEALEAELAELPERLEELEERLE---- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 270 DINTLTRQKELLLQKLSTFEETNRTLRDLLREQHcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQE 349
Cdd:COG4717 157 ELRELEEELEELEAELAELQEELEELLEQLSLAT-EEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENE 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 350 IQCEKAQAKTASELSKSMesmrghLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKK 429
Cdd:COG4717 236 LEAAALEERLKEARLLLL------IAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 430 AIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVvkEKGDLELEIIVLNDRVTDL------------ 497
Cdd:COG4717 310 LPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA--EELEEELQLEELEQEIAALlaeagvedeeel 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 498 ------VNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLEN-----ERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG 566
Cdd:COG4717 388 raaleqAEEYQELKEELEELEEQLEELLGELEELLEALDEEEleeelEELEEELEELEEELEELREELAELEAELEQLEE 467
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 310750404 567 midnyKSQVMKTRLEADEVAAQLERCDKENKILKITEAKLAECQDQLQ 614
Cdd:COG4717 468 -----DGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
265-565 |
9.21e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.88 E-value: 9.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 265 QMTCTDINTLTRQKELLLQKLSTFEETNRTLRDL-LRE-QHCKEDSERLMEQQgallkrlAEADSEKARLLlllqDKDKE 342
Cdd:pfam15921 495 ERTVSDLTASLQEKERAIEATNAEITKLRSRVDLkLQElQHLKNEGDHLRNVQ-------TECEALKLQMA----EKDKV 563
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 343 VEELLQEI----QCEKAQAKTA-------SELSKSMESMRGHLQ----------AQLRSKEAENSRLCMQIKNLERSGNQ 401
Cdd:pfam15921 564 IEILRQQIenmtQLVGQHGRTAgamqvekAQLEKEINDRRLELQefkilkdkkdAKIRELEARVSDLELEKVKLVNAGSE 643
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 402 H-------KAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYN 474
Cdd:pfam15921 644 RlravkdiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDG 723
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 475 QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKM----------REDRDSLVERL-------HRQTAEYSAFKLENERLK 537
Cdd:pfam15921 724 HAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMtnankekhflKEEKNKLSQELstvatekNKMAGELEVLRSQERRLK 803
|
330 340
....*....|....*....|....*...
gi 310750404 538 ASFAPMEDKLNQAHLEVQQLKASVKNYE 565
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQE 831
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
186-473 |
1.17e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 186 ELEEVAHELAETEHEntvlRHNIERmkeekdftilQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQ 265
Cdd:TIGR02168 240 ELEELQEELKEAEEE----LEELTA----------ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 266 MTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEE 345
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDELAEELAEL--EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLET 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 346 LLQEI-QCEKAQAKTASELSKsmesmrghLQAQLRSKEAENSRLCMQIKNLERSgnQHKAEVEAIMEQLKELKQkGDRDK 424
Cdd:TIGR02168 384 LRSKVaQLELQIASLNNEIER--------LEARLERLEDRRERLQQEIEELLKK--LEEAELKELQAELEELEE-ELEEL 452
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 310750404 425 ESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRY 473
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
472-651 |
1.93e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.66 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 472 RYNQVVKEKGDLELEIIVLndRVTDLVNQQQTLEEKmredRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAH 551
Cdd:TIGR02168 214 RYKELKAELRELELALLVL--RLEELREELEELQEE----LKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 552 LEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLE----RCDKENKILKITEAKLAECQDQLQGYERKNIDLTAII 627
Cdd:TIGR02168 288 KELYALANEISRLEQQKQILRERLANLERQLEELEAQLEelesKLDELAEELAELEEKLEELKEELESLEAELEELEAEL 367
|
170 180
....*....|....*....|....
gi 310750404 628 SDLRSRVRDWQKGSHELTRAGARI 651
Cdd:TIGR02168 368 EELESRLEELEEQLETLRSKVAQL 391
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
147-494 |
2.53e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 147 RYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHEntvlrhnIERMKEEKDFTILQKKHLQ 226
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE-------LARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 227 QEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMtctdintltrQKELLLQKLSTFEETNRTLRDLLREQhcke 306
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE----------AEAELAEAEEALLEAEAELAEAEEEL---- 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 307 dsERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELsksmesmRGHLQAQLRSKEAENS 386
Cdd:COG1196 382 --EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE-------EEEEEEALEEAAEEEA 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 387 RLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKdlyVAEALSTL 466
Cdd:COG1196 453 ELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG---LAGAVAVL 529
|
330 340
....*....|....*....|....*....
gi 310750404 467 ESWRSRYNQVVKEK-GDLELEIIVLNDRV 494
Cdd:COG1196 530 IGVEAAYEAALEAAlAAALQNIVVEDDEV 558
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
144-443 |
2.70e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 144 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERqmAKRFLEERKEELEEVAHEL--AETEHENTVLRHNIERMKEEKDFTILQ 221
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEAKKAEEAKKADEAkkAEEKKKADELKKAEELKKAEEKKKAEE 1568
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 222 KKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDintlTRQKELLLQKLSTFEETNRTLRDLLRE 301
Cdd:PTZ00121 1569 AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE----AKIKAEELKKAEEEKKKVEQLKKKEAE 1644
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 302 QHCKEDSERLMEQQGAL----LKRLAEADSEKARLLLLLQDKDKEVEELLQEiqcEKAQAKTASELSKSMESMRGHLQaQ 377
Cdd:PTZ00121 1645 EKKKAEELKKAEEENKIkaaeEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK---EAEEAKKAEELKKKEAEEKKKAE-E 1720
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 310750404 378 LRSKEAENSrlcMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEE 443
Cdd:PTZ00121 1721 LKKAEEENK---IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE 1783
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
244-632 |
3.06e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.19 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 244 AAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhckEDSERLMEQQGALLKRLA 323
Cdd:TIGR00618 296 AAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQE---IHIRDAHEVATSIREISC 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 324 EADSEKARLLLLLQDK--DKEVEELL-QEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQ---IKNLER 397
Cdd:TIGR00618 373 QQHTLTQHIHTLQQQKttLTQKLQSLcKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCaaaITCTAQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 398 SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQ--------LHVQLADKDLYVAEALStlesw 469
Cdd:TIGR00618 453 CEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplcgscIHPNPARQDIDNPGPLT----- 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 470 rSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDS---LVERLHRQTAEYSAFKLENERLKaSFAPMEDK 546
Cdd:TIGR00618 528 -RRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSfsiLTQCDNRSKEDIPNLQNITVRLQ-DLTEKLSE 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 547 LNQAHLEVQQLKASVKNYEgmIDNYKSQVMKTRLEADEVAAQLERCDKENKIL--KITEAKLAECQDQLQGYERKNIDLT 624
Cdd:TIGR00618 606 AEDMLACEQHALLRKLQPE--QDLQDVRLHLQQCSQELALKLTALHALQLTLTqeRVREHALSIRVLPKELLASRQLALQ 683
|
....*...
gi 310750404 625 AIISDLRS 632
Cdd:TIGR00618 684 KMQSEKEQ 691
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
148-581 |
3.54e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.95 E-value: 3.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 148 YDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQ 227
Cdd:pfam15921 101 HEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMML 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 228 EKECLMSKLVEAEMD-----------------------GAAAAK---------------------QVMALK--------- 254
Cdd:pfam15921 181 SHEGVLQEIRSILVDfeeasgkkiyehdsmstmhfrslGSAISKilreldteisylkgrifpvedQLEALKsesqnkiel 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 255 ------DTIGKLKTEKQMTCTDI-----------NTLTRQKELL-----------LQKLSTFEETNRTLRDLLRE-QHCK 305
Cdd:pfam15921 261 llqqhqDRIEQLISEHEVEITGLtekassarsqaNSIQSQLEIIqeqarnqnsmyMRQLSDLESTVSQLRSELREaKRMY 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 306 EDSERLMEQQGALLK-RLAEADSEKARLLLLLQDKDKEVEELL-------QEIQCEKAQAKTASELSKSMESMRGHLQAQ 377
Cdd:pfam15921 341 EDKIEELEKQLVLANsELTEARTERDQFSQESGNLDDQLQKLLadlhkreKELSLEKEQNKRLWDRDTGNSITIDHLRRE 420
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 378 LRSKEAENSRLCMQIKNLERS-GNQHKAEVEAI------MEQLKELKQKGDRDKESLKKAIR---AQKERAEKSEEYAEQ 447
Cdd:pfam15921 421 LDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIqgknesLEKVSSLTAQLESTKEMLRKVVEeltAKKMTLESSERTVSD 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 448 LHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEiivlNDRVTDLVNQQQTLEEKMREdRDSLVERLHRQTAEYS 527
Cdd:pfam15921 501 LTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNE----GDHLRNVQTECEALKLQMAE-KDKVIEILRQQIENMT 575
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 310750404 528 AFKLENERLKASF----APMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLE 581
Cdd:pfam15921 576 QLVGQHGRTAGAMqvekAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELE 633
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
209-480 |
4.25e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.57 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 209 ERMKEEKdFTILQKKHLQQEKECLMS------KLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKEL-- 280
Cdd:pfam17380 286 ERQQQEK-FEKMEQERLRQEKEEKAReverrrKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELer 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 281 -LLQKLSTFEETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKT 359
Cdd:pfam17380 365 iRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEER 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 360 ASELS--KSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQ-LKELKQKG----------DRDKES 426
Cdd:pfam17380 445 AREMErvRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKeLEERKQAMieeerkrkllEKEMEE 524
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 310750404 427 LKKAIRAQKERAEKSEEYAEQLHVQLADKdlyVAEALSTLESWRSRYNQVVKEK 480
Cdd:pfam17380 525 RQKAIYEEERRREAEEERRKQQEMEERRR---IQEQMRKATEERSRLEAMERER 575
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
218-610 |
4.63e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 43.50 E-value: 4.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 218 TILQKKHLQQEkeclmskLVEAEMD-GAAAAKQVMALKDTIGKLKTEKQmtctdinTLTRQKELLlQKLSTFEETNRTLR 296
Cdd:PRK10929 21 TAPDEKQITQE-------LEQAKAAkTPAQAEIVEALQSALNWLEERKG-------SLERAKQYQ-QVIDNFPKLSAELR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 297 DLLREQHCKEDSERLMEQQGALLKRLAEADS---EKARLLLLLQDKDKEVEELLQEIQCEKAQAKTA-SELSKSMESMRG 372
Cdd:PRK10929 86 QQLNNERDEPRSVPPNMSTDALEQEILQVSSqllEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQlNEIERRLQTLGT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 373 ----HLQAQLRSKEAENSRLCMQIKNLER---SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKER-AEKSEEY 444
Cdd:PRK10929 166 pntpLAQAQLTALQAESAALKALVDELELaqlSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQReAERALES 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 445 AEQLHVQLAD------KDLYVAEALS-TLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ------TLEEKMRED 511
Cdd:PRK10929 246 TELLAEQSGDlpksivAQFKINRELSqALNQQAQRMDLIASQQRQAASQTLQVRQALNTLREQSQwlgvsnALGEALRAQ 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 512 RDSLVERLHRQTAEYSAFKLENERLKasfapMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEAdeVAAQLER 591
Cdd:PRK10929 326 VARLPEMPKPQQLDTEMAQLRVQRLR-----YEDLLNKQPQLRQIRQADGQPLTAEQNRILDAQLRTQREL--LNSLLSG 398
|
410
....*....|....*....
gi 310750404 592 CDkeNKILKITEAKLAECQ 610
Cdd:PRK10929 399 GD--TLILELTKLKVANSQ 415
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
207-545 |
5.26e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.13 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 207 NIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTD-----INTLTRQKELL 281
Cdd:PRK03918 385 TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEhrkelLEEYTAELKRI 464
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 282 LQKLSTFEETNRTLRDLLREQHCKEDSERLMEQQGALLKRLAEADSE-KARLLLLLQDKDKEVEELLQEIQCEKAQAKTA 360
Cdd:PRK03918 465 EKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKlKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSL 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 361 SELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESlKKAIRAQKERAEK 440
Cdd:PRK03918 545 KKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDA-EKELEREEKELKK 623
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 441 SEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQvvKEKGDLELEIIVLNDRVTDLVNQQQTLEEKmREDRDSLVERLH 520
Cdd:PRK03918 624 LEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAELEELEKR-REEIKKTLEKLK 700
|
330 340
....*....|....*....|....*
gi 310750404 521 RQTAEYSAFKLENERLKASFAPMED 545
Cdd:PRK03918 701 EELEEREKAKKELEKLEKALERVEE 725
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
323-588 |
8.08e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 323 AEADSEKARLLLLLQDKDKEVEELLQEIqcekaqaktaSELSKSMESmrghLQAQLRSKEAENSRLcmqiknlersgnqh 402
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAEL----------DALQAELEE----LNEEYNELQAELEAL-------------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 403 KAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKeRAEKSEEYAEQLhvqLADKDLyvAEALSTLESWRsrynqvvkekgd 482
Cdd:COG3883 64 QAEIDKLQAEIAEAEAEIEERREELGERARALY-RSGGSVSYLDVL---LGSESF--SDFLDRLSALS------------ 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 483 leleiiVLNDRVTDLVNQQQTLEEKMREDRDSLVErlhrQTAEYSAFKLENERLKASfapMEDKLNQAHLEVQQLKASVK 562
Cdd:COG3883 126 ------KIADADADLLEELKADKAELEAKKAELEA----KLAELEALKAELEAAKAE---LEAQQAEQEALLAQLSAEEA 192
|
250 260
....*....|....*....|....*.
gi 310750404 563 NYEGMIDNYKSQVMKTRLEADEVAAQ 588
Cdd:COG3883 193 AAEAQLAELEAELAAAEAAAAAAAAA 218
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
339-471 |
9.03e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.88 E-value: 9.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 339 KDKEVEELLQEIQcEKAQAKTASELSK-SMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELK 417
Cdd:PRK09039 51 KDSALDRLNSQIA-ELADLLSLERQGNqDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEK 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 310750404 418 QKGDRDKESLK------KAIRAQKERAEK----SEEYAEQLHVQLAD--KDLYVAEA--LSTLESWRS 471
Cdd:PRK09039 130 QVSARALAQVEllnqqiAALRRQLAALEAaldaSEKRDRESQAKIADlgRRLNVALAqrVQELNRYRS 197
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
305-510 |
9.41e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 9.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 305 KEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAE 384
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 385 NSRlcmQIKNLERSGNQHKAEV-------EAIMEQLKELKQKGDRDKESLkKAIRAQKERAEKSEEYAEQLHVQLADKDL 457
Cdd:COG4942 106 LAE---LLRALYRLGRQPPLALllspedfLDAVRRLQYLKYLAPARREQA-EELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 310750404 458 YVAEALSTLESWRSRYNQVVKEkgdLELEIIVLNDRVTDLVNQQQTLEEKMRE 510
Cdd:COG4942 182 ELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIAR 231
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
276-536 |
9.60e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.52 E-value: 9.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 276 RQKELLLQKLSTFEETNRTLRDLLRE-QHCKEDSERLMEQQGALLKRLAEA-DSEKARLLLLLQDKDKEVEELLQEIQCE 353
Cdd:pfam12128 622 AAEEQLVQANGELEKASREETFARTAlKNARLDLRRLFDEKQSEKDKKNKAlAERKDSANERLNSLEAQLKQLDKKHQAW 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 354 KAQAK-TASELSKSMESMRGHLQAQLRSKEAensRLCMQIKNLErsgNQHKAEVEAIMEQLK-ELKQKG-DRDKES-LKK 429
Cdd:pfam12128 702 LEEQKeQKREARTEKQAYWQVVEGALDAQLA---LLKAAIAARR---SGAKAELKALETWYKrDLASLGvDPDVIAkLKR 775
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 430 AIR---AQKERAEKSEEYAEQLHVQLAdkdlyvaealstlESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEE 506
Cdd:pfam12128 776 EIRtleRKIERIAVRRQEVLRYFDWYQ-------------ETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRA 842
|
250 260 270
....*....|....*....|....*....|
gi 310750404 507 KMREDRDSLVERLHRQTAEYSAFKLENERL 536
Cdd:pfam12128 843 KLEMERKASEKQQVRLSENLRGLRCEMSKL 872
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
288-484 |
1.04e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 288 FEETNRTLRDLLREQHCKEDSERLMEQQGALLK---RLAEADSEKA-----RLLLLLQDKDKEVEELLQEIQCEKAQAKT 359
Cdd:COG4913 234 FDDLERAHEALEDAREQIELLEPIRELAERYAAareRLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 360 ASELSKSMESMRGHLQAQLRSKEAEN-SRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERA 438
Cdd:COG4913 314 LEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 310750404 439 EKSEEYAEQLHVQLadkdlyvAEALSTLESWRSRYNQVVKEKGDLE 484
Cdd:COG4913 394 EALEEELEALEEAL-------AEAEAALRDLRRELRELEAEIASLE 432
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
270-552 |
1.10e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.40 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 270 DINTLTRQKELLLQKLSTFEETNRTLRDLLreqhckEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKdKEVEELLQE 349
Cdd:pfam05483 521 DIINCKKQEERMLKQIENLEEKEMNLRDEL------ESVREEFIQKGDEVKCKLDKSEENARSIEYEVLK-KEKQMKILE 593
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 350 IQCEKAQaKTASELSKSMESMRGHLQAQLRSKEAENSrlcmQIKNLERSGNQHKAEVEAIMEQLKELK---QKGDRDKES 426
Cdd:pfam05483 594 NKCNNLK-KQIENKNKNIEELHQENKALKKKGSAENK----QLNAYEIKVNKLELELASAKQKFEEIIdnyQKEIEDKKI 668
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 427 LKKAIRAQKERAEKSEEYAEQLHVQLADKDLY-VAEALSTLESWRSRYNQVVKEKgdlELEIIVLNDRVTDLVNQQQTLE 505
Cdd:pfam05483 669 SEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHkIAEMVALMEKHKHQYDKIIEER---DSELGLYKNKEQEQSSAKAALE 745
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 310750404 506 EKMREDRDSLVERLHRQTAEysafKLENERLKasfapMEDKLNQAHL 552
Cdd:pfam05483 746 IELSNIKAELLSLKKQLEIE----KEEKEKLK-----MEAKENTAIL 783
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
365-638 |
1.47e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 365 KSMESMRGHLQAQLRSKEAENSRLcMQIKnlERSGNQHKAE--VEAIMEQLkeLKQKGDRDKESLKKAIRAQKERAEKSE 442
Cdd:COG3206 114 ASREAAIERLRKNLTVEPVKGSNV-IEIS--YTSPDPELAAavANALAEAY--LEQNLELRREEARKALEFLEEQLPELR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 443 EYAEQLHVQLADkdlYVAEA-LSTLESwrsRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLhr 521
Cdd:COG3206 189 KELEEAEAALEE---FRQKNgLVDLSE---EAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELL-- 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 522 QTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNyksqvmktrlEADEVAAQLERcdkENKILKI 601
Cdd:COG3206 261 QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQ----------EAQRILASLEA---ELEALQA 327
|
250 260 270
....*....|....*....|....*....|....*..
gi 310750404 602 TEAKLaecQDQLQGYERKNIDLTAIISDLRSRVRDWQ 638
Cdd:COG3206 328 REASL---QAQLAQLEARLAELPELEAELRRLEREVE 361
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
193-518 |
1.73e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 193 ELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTctDIN 272
Cdd:TIGR02169 717 KIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIP 794
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 273 TLTRQKELLLQKLSTFEETNRTL-RDLLREQHCKEDSERLMEQqgaLLKRLAEADSEKARLLLLLQDKDKEVEELLQEIq 351
Cdd:TIGR02169 795 EIQAELSKLEEEVSRIEARLREIeQKLNRLTLEKEYLEKEIQE---LQEQRIDLKEQIKSIEKEIENLNGKKEELEEEL- 870
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 352 cEKAQAKTaselsKSMESMRGHLQAQLRSKEAensrlcmQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAI 431
Cdd:TIGR02169 871 -EELEAAL-----RDLESRLGDLKKERDELEA-------QLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 432 RAQKERAEKSEEYAEQLHVQLadKDLYVAEALSTLESwrsrynqvVKEKGDLELEIIVlnDRVTDLVNQQQTLEekmrED 511
Cdd:TIGR02169 938 DPKGEDEEIPEEELSLEDVQA--ELQRVEEEIRALEP--------VNMLAIQEYEEVL--KRLDELKEKRAKLE----EE 1001
|
....*..
gi 310750404 512 RDSLVER 518
Cdd:TIGR02169 1002 RKAILER 1008
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
221-415 |
1.77e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 221 QKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELllqklstfEETNRTLRDLLR 300
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREI--------AELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 301 EQhckEDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKsmESMRGHLQAQLRS 380
Cdd:COG4913 683 SS---DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAR--LELRALLEERFAA 757
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 310750404 381 KEAENSRLCM------QIKNLERSGNQHKAEVEAIMEQLKE 415
Cdd:COG4913 758 ALGDAVERELrenleeRIDALRARLNRAEEELERAMRAFNR 798
|
|
| COG4192 |
COG4192 |
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal ... |
244-520 |
1.91e-03 |
|
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms];
Pssm-ID: 443346 [Multi-domain] Cd Length: 640 Bit Score: 41.21 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 244 AAAAKQVMALKDTIGKLKTEKQmtctdINTLTRQKELLLQKLSTFEETNRTLRDLLREQhckedsERLMEQQGALL--KR 321
Cdd:COG4192 68 VAALPEFAAATNTTERSQLRNQ-----LNTQLADIEELLAELEQLTQDAGDLRAAVADL------RNLLQQLDSLLtqRI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 322 LAEADSEKA--RLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENsrlcmQIKNL--ER 397
Cdd:COG4192 137 ALRRRLQELleQINWLHQDFNSELTPLLQEASWQQTRLLDSVETTESLRNLQNELQLLLRLLAIEN-----QIVSLlrEV 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 398 SGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAiraqkeraekSEEYAeqlHVQLADKDLYVAEALSTLESWRSRYNQVV 477
Cdd:COG4192 212 AAARDQADVDNLFDRLQYLKDELDRNLQALKNY----------PSTIT---LRQLIDELLAIGSGEGGLPSLRRDELAAQ 278
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 310750404 478 KEKGDLELEIIVLNDRVTDLVNQQ-QTLEEKMREDRDSLVERLH 520
Cdd:COG4192 279 ATLEALAEENNSILEQLRTQISGLvGNSREQLVALNQETAQLVQ 322
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
410-589 |
2.59e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 410 MEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLyvaEALSTLEswrsrynqvvKEKGDLELEIIV 489
Cdd:COG4913 290 LELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGG---DRLEQLE----------REIERLERELEE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 490 LNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGMID 569
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKS 436
|
170 180
....*....|....*....|
gi 310750404 570 NYKSQVMKTRleaDEVAAQL 589
Cdd:COG4913 437 NIPARLLALR---DALAEAL 453
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
299-446 |
2.98e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 40.56 E-value: 2.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 299 LREQHCKEDSERLMEQQGALLKRLAEADSEK-ARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQ 377
Cdd:PRK09510 80 QRKKKEQQQAEELQQKQAAEQERLKQLEKERlAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAA 159
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 378 LRSKEAENSRLCM-QIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAE 446
Cdd:PRK09510 160 AKKAAAEAKKKAEaEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAK 229
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
327-512 |
3.42e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.89 E-value: 3.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 327 SEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEV 406
Cdd:PTZ00121 1615 AEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEAL 1694
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 407 EAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEyAEQLHVQlADKDLYVAEALSTLESWRSRYNQVVKEKGDLELE 486
Cdd:PTZ00121 1695 KKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIK-AEEAKKE-AEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
170 180
....*....|....*....|....*.
gi 310750404 487 IIVLNDRVTDLVNQQQTLEEKMREDR 512
Cdd:PTZ00121 1773 IRKEKEAVIEEELDEEDEKRRMEVDK 1798
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
312-468 |
3.54e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.52 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 312 MEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ---AQLRSKEAENSRL 388
Cdd:COG1579 2 MPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLEleiEEVEARIKKYEEQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 389 CMQIKNLErsgnqhkaEVEAIMEQLKELKqkgdRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLES 468
Cdd:COG1579 82 LGNVRNNK--------EYEALQKEIESLK----RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDE 149
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
311-545 |
3.91e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.49 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 311 LMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQ-AQLRSKEAENSRLC 389
Cdd:pfam17380 277 IVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmAMERERELERIRQE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 390 MQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEAlstlESW 469
Cdd:pfam17380 357 ERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQ----EEA 432
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 310750404 470 RSRYNQVVKEKGDLELEIIvlndRVTDLVNQQQtleekmredrdslVERLHRQTAEYSAFKLENERLKASFAPMED 545
Cdd:pfam17380 433 RQREVRRLEEERAREMERV----RLEEQERQQQ-------------VERLRQQEEERKRKKLELEKEKRDRKRAEE 491
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
263-646 |
4.02e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 263 EKQMTCTDINTLTRQKELLLQKLStfEETNRTLRDLLREQHCK-EDSERLMEQQGALLKRLAEADSEKARLLLLLqdkdK 341
Cdd:COG3096 240 ENRMTLEAIRVTQSDRDLFKHLIT--EATNYVAADYMRHANERrELSERALELRRELFGARRQLAEEQYRLVEMA----R 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 342 EVEELlqeiqcekaqAKTASELSKSMESMRGHL---QAQLRSKEAensrlcmqiknLERsgnqHKAEVEAIMEQLKElkQ 418
Cdd:COG3096 314 ELEEL----------SARESDLEQDYQAASDHLnlvQTALRQQEK-----------IER----YQEDLEELTERLEE--Q 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 419 KGDRdKESLKKAIRAQkERAEKSEEYAEQLHVQLADkdlyVAEALSTLESWRSRYNQVVKEKGDL-------ELEIIVLN 491
Cdd:COG3096 367 EEVV-EEAAEQLAEAE-ARLEAAEEEVDSLKSQLAD----YQQALDVQQTRAIQYQQAVQALEKAralcglpDLTPENAE 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 492 DRVTDLVNQQQTLEEKMR--EDRDSLVERLHRQTAEysAFKL------ENERLKA---------------SFAPMEDKLN 548
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLelEQKLSVADAARRQFEK--AYELvckiagEVERSQAwqtarellrryrsqqALAQRLQQLR 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 549 QAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILkitEAKLAECQDQLQGYERKNIDLTAIIS 628
Cdd:COG3096 519 AQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEEL---EEQAAEAVEQRSELRQQLEQLRARIK 595
|
410
....*....|....*...
gi 310750404 629 DLRSRVRDWQKGSHELTR 646
Cdd:COG3096 596 ELAARAPAWLAAQDALER 613
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
254-563 |
4.06e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.39 E-value: 4.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 254 KDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcKEDSERLMEQQGALLKRLAEADSEKARLL 333
Cdd:TIGR04523 369 QNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKL--QQEKELLEKEIERLKETIIKNNSEIKDLT 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 334 LLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSG---NQHKAEVEAIM 410
Cdd:TIGR04523 447 NQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVkdlTKKISSLKEKI 526
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 411 EQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQladkdlyvaealSTLESWRSRYNQVVKEKGDLELEIIVL 490
Cdd:TIGR04523 527 EKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKN------------KEIEELKQTQKSLKKKQEEKQELIDQK 594
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 310750404 491 NDRVTDLVNQQQTLEEKMREdrdslverlhrQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKN 563
Cdd:TIGR04523 595 EKEKKDLIKEIEEKEKKISS-----------LEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
274-505 |
4.33e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.39 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 274 LTRQKELLLQKLstfEETNRTLRDLlREQHckeDSERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCE 353
Cdd:COG3206 180 LEEQLPELRKEL---EEAEAALEEF-RQKN---GLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 354 KAQAKTASElSKSMESMRGHLqAQLRSKEAENSRlcmqiknleRSGNQHkAEVEAIMEQLKELKQKGDRDKESLKKAIRA 433
Cdd:COG3206 253 PDALPELLQ-SPVIQQLRAQL-AELEAELAELSA---------RYTPNH-PDVIALRAQIAALRAQLQQEAQRILASLEA 320
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 310750404 434 QKERAEKSEEYAEQlhvqladkdlyvaeALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLE 505
Cdd:COG3206 321 ELEALQAREASLQA--------------QLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEAR 378
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
156-608 |
4.97e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.10 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 156 MNAVGCLKSEVKMQKGERQMAKRFLEERkeeleevaheLAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSK 235
Cdd:pfam15921 316 MRQLSDLESTVSQLRSELREAKRMYEDK----------IEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLAD 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 236 LVEAEMDGAAAAKQVMALKD-------TIGKLKTEkqmtCTDINTLTRQKELLLQKLSTfeetnrtlrdllreqHCKEDS 308
Cdd:pfam15921 386 LHKREKELSLEKEQNKRLWDrdtgnsiTIDHLRRE----LDDRNMEVQRLEALLKAMKS---------------ECQGQM 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 309 ERLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRL 388
Cdd:pfam15921 447 ERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRV 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 389 CMQIKNLERSGNQ--HKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYA-------EQLHVQLADKDLYV 459
Cdd:pfam15921 527 DLKLQELQHLKNEgdHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAgamqvekAQLEKEINDRRLEL 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 460 AEALSTLESWRSRYNQVVKEKGDLELEIIVL----NDRVTDLVNQQQTLEEKMREDRDSLVErLHRQTAEYSA----FKL 531
Cdd:pfam15921 607 QEFKILKDKKDAKIRELEARVSDLELEKVKLvnagSERLRAVKDIKQERDQLLNEVKTSRNE-LNSLSEDYEVlkrnFRN 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 532 ENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEG-------MIDNYKSQVMKTRLEADEVAAQLE-------RCDKENK 597
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGsdghamkVAMGMQKQITAKRGQIDALQSKIQfleeamtNANKEKH 765
|
490
....*....|.
gi 310750404 598 ILKITEAKLAE 608
Cdd:pfam15921 766 FLKEEKNKLSQ 776
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
318-589 |
5.54e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 39.88 E-value: 5.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 318 LLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKtasELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLER 397
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWE---RQRRELESRVAELKEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 398 SGNQHKAEVEAIMEQLKELKQK---GDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDlyvaealSTLESWRSRYN 474
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARireLEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEE-------AERKQLQAKLQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 475 QVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERlHRQTAeysafklENERLKASFAPMEDKLNQAHLEV 554
Cdd:pfam07888 182 QTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTA-HRKEA-------ENEALLEELRSLQERLNASERKV 253
|
250 260 270
....*....|....*....|....*....|....*
gi 310750404 555 QQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQL 589
Cdd:pfam07888 254 EGLGEELSSMAAQRDRTQAELHQARLQAAQLTLQL 288
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
391-608 |
5.79e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 39.92 E-value: 5.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 391 QIKNLERsgnqhKAEV----EAIMEQLKELKQKGD-RDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKD-------LY 458
Cdd:COG1196 201 QLEPLER-----QAEKaeryRELKEELKELEAELLlLKLRELEAELEELEAELEELEAELEELEAELAELEaeleelrLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 459 VAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMRE---DRDSLVERLHRQTAEYSAFKLENER 535
Cdd:COG1196 276 LEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEleeELEELEEELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 310750404 536 LKASFAPMEDKLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKENKILKITEAKLAE 608
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
198-647 |
6.38e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 39.77 E-value: 6.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 198 EHENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQ 277
Cdd:pfam01576 214 EGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQ 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 278 KELLLQKLstfEETNRTLRDLLREQHCKEDSERLMEQQGALLKRL--AEADSEKARLLLLLQDKDKEVEELLQEIQCEKa 355
Cdd:pfam01576 294 RRDLGEEL---EALKTELEDTLDTTAAQQELRSKREQEVTELKKAleEETRSHEAQLQEMRQKHTQALEELTEQLEQAK- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 356 QAKTASELSK-SMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKA---EVEAIMEQLKELKQKGDRDKESLKKAI 431
Cdd:pfam01576 370 RNKANLEKAKqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQArlsESERQRAELAEKLSKLQSELESVSSLL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 432 RAQKERAEKSEEYAEQLHVQLAD----------KDLYVAEALSTLE----SWRSRYNQVVKEKGDLELEIIVLNDRVTDL 497
Cdd:pfam01576 450 NEAEGKNIKLSKDVSSLESQLQDtqellqeetrQKLNLSTRLRQLEdernSLQEQLEEEEEAKRNVERQLSTLQAQLSDM 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 498 VNQQQ-------TLEE---KMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMEDKLNQAHLEVQQLKASVKNYEGM 567
Cdd:pfam01576 530 KKKLEedagtleALEEgkkRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQM 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 568 IDNYKSQVMKTRLEADEvaAQLERCDKENKILKITEAkLAECQDQLQGYERKNIDLTAIISDLRSRVRDWQKGSHELTRA 647
Cdd:pfam01576 610 LAEEKAISARYAEERDR--AEAEAREKETRALSLARA-LEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERS 686
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
150-608 |
6.99e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 6.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 150 KKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKKHLQQEK 229
Cdd:PTZ00121 1366 AEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK 1445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 230 -ECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQmtctdintltRQKELLLQKLSTFEETNRTLRDLLREQHCKEDS 308
Cdd:PTZ00121 1446 aDEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEA----------KKADEAKKKAEEAKKKADEAKKAAEAKKKADEA 1515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 309 ERLMEQQGALLKRLAE----ADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLqaqlrSKEAE 384
Cdd:PTZ00121 1516 KKAEEAKKADEAKKAEeakkADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE-----AKKAE 1590
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 385 NSRLCMQIKNLERSgNQHKAEvEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALS 464
Cdd:PTZ00121 1591 EARIEEVMKLYEEE-KKMKAE-EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAK 1668
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 465 TLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQ----TLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASF 540
Cdd:PTZ00121 1669 KAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkkkEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 310750404 541 APMEDKLNQahlEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLErCDKENKILKITEAKLAE 608
Cdd:PTZ00121 1749 AKKDEEEKK---KIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME-VDKKIKDIFDNFANIIE 1812
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
144-517 |
7.94e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 7.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 144 KMNRYDKKIDSLMNAVGCLKSEVKMQKGERQMAKRFLEERKEELEEVAHELAETEHENTVLRHNIERMKEEKDFTILQKK 223
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 224 HLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDinTLTRQKELLLQKLSTFEETNRTLRDLLREQH 303
Cdd:PTZ00121 1479 AEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKAD--EAKKAEEAKKADEAKKAEEKKKADELKKAEE 1556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 304 CK--------EDSERLMEQQGALLKRLAEA-DSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGhl 374
Cdd:PTZ00121 1557 LKkaeekkkaEEAKKAEEDKNMALRKAEEAkKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK-- 1634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 375 QAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLK---ELKQKGDRDKESLKKAIRAQKERAEKSEEY------- 444
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKkkaEEAKKAEEDEKKAAEALKKEAEEAKKAEELkkkeaee 1714
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 310750404 445 ---AEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDleleiivlNDRVTDLVNQQQTLEEKMREDRDSLVE 517
Cdd:PTZ00121 1715 kkkAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE--------KKKIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
228-464 |
9.90e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 38.66 E-value: 9.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 228 EKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQhcked 307
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER----- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 308 sERLMEQQGA---LLKRLAEADS-----EKARLLLLLQDKDKEveeLLQEIQCEKAQAKTAselsksmesmrghlQAQLR 379
Cdd:COG3883 92 -ARALYRSGGsvsYLDVLLGSESfsdflDRLSALSKIADADAD---LLEELKADKAELEAK--------------KAELE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 310750404 380 SKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYV 459
Cdd:COG3883 154 AKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
....*
gi 310750404 460 AEALS 464
Cdd:COG3883 234 AAAAA 238
|
|
| |
