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Conserved domains on  [gi|22122421|ref|NP_666089|]
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solute carrier family 45 member 3 [Mus musculus]

Protein Classification

SLC45 family MFS transporter( domain architecture ID 13022743)

SLC45 (solute carrier 45) family major facilitator superfamily (MFS) transporter facilitates the transport of sugars such as sucrose, glucose, and maltose into the cell, with the concomitant uptake of protons (symport system)

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085
PubMed:  26098515|26758938
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313   1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313  81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313 160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313 223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313 297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313 367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 22122421 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313 380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313   1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313  81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313 160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313 223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313 297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313 367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 22122421 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313 380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
18-350 3.44e-26

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 111.82  E-value: 3.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:TIGR01301   6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    98 LSLFLIPRAGWLAGL----LYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLF-RDPDHCRQAFSVYAFMISLGG 172
Cdd:TIGR01301  86 FAVILIGFAADIGHLfgdnLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTgGDARRTRIANAYFSFFMAIGN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   173 CLGYLLPAID-W-------DTSVLAPYLGTQEECLfgLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpc 244
Cdd:TIGR01301 166 VLGYAAGAYSgLykifpftKTEACGVSCANLKSCF--LIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK---- 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   245 HVGLAFrnLGTLFPRLQQLccrmPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEpgtearRHYDEGIRMG 324
Cdd:TIGR01301 240 HGEEAF--FGELFGAFKYL----PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG------AKYDDGVRAG 307
                         330       340
                  ....*....|....*....|....*.
gi 22122421   325 SLGLFLQCAISLVFSLVMDRLVQKFG 350
Cdd:TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWG 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
17-399 4.81e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 4.81e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLG 95
Cdd:COG2211  11 EKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  96 VLLSLFLIPRAGWLAGLLYpdtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLG 175
Cdd:COG2211  91 LALSFVLLFTAPDLSPTGK-------LIYALVTYLLLGLAYTLVNIPYSALGAELTPDYEERTRLSSWRFAFAGLGGLLA 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 176 YLLPAIdwdtsvLAPYLGTQEE----CLFGLLTLIFLICMAATLFVTEEAVLgPPEPAEGLLVSavsrrccpchVGLAFR 251
Cdd:COG2211 164 SVLPPP------LVAAFGGDAAlgyrLTALIFAVLGLLAFLLTFFGTKERPV-PEEEKVSLKES----------LKALLK 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 252 NlgtlfprlqqlccrmpRTLRRLFVAELCSWMALMT----FTLFYTDFVGEGLyqgvpraepgtearrhydegiRMGSLG 327
Cdd:COG2211 227 N----------------RPFLLLLLAYLLFFLALALvaalLLYYFKYVLGLSA---------------------ALVGLL 269
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22122421 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLAS--VMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTL 399
Cdd:COG2211 270 LALYFLAALLGAPLWPRLAKRFGKKKAFIIGllLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPWAM 343
MFS_1 pfam07690
Major Facilitator Superfamily;
33-403 2.45e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 46.64  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    33 AAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLIPRAGWLagl 112
Cdd:pfam07690  14 LLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSD----RFGRRRVLLIGLLLFALGLLLLLFASSLW--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   113 lypdtrplelaLLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRqAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYL 192
Cdd:pfam07690  87 -----------LLLVLRVLQGLGAGALFPAALALIADWFPPEERGR-ALGLVSAGFGLGAALGPLL------GGLLASLF 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   193 GTQeeCLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSrrccpchvglafrnlgtlfpRLQQLCCRMPRTLR 272
Cdd:pfam07690 149 GWR--AAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIV--------------------AWKALLRDPVLWLL 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   273 RLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepgtearrhydeGIRMGSLGLflqcaISLVFSLVMDRLVQKFGTR 352
Cdd:pfam07690 207 LALLLFGFAFFGLLTYLPLYQEVLGLSALLA----------------GLLLGLGGL-----LGAIGRLLLGRLSDRLGRR 265
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 22122421   353 SVYLASV---MTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLY 403
Cdd:pfam07690 266 RRLLLALlllILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDL 319
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313   1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313  81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313 160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313 223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313 297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313 367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                       490       500       510       520
                ....*....|....*....|....*....|....*....|..
gi 22122421 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313 380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
18-350 3.44e-26

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 111.82  E-value: 3.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:TIGR01301   6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    98 LSLFLIPRAGWLAGL----LYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLF-RDPDHCRQAFSVYAFMISLGG 172
Cdd:TIGR01301  86 FAVILIGFAADIGHLfgdnLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTgGDARRTRIANAYFSFFMAIGN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   173 CLGYLLPAID-W-------DTSVLAPYLGTQEECLfgLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpc 244
Cdd:TIGR01301 166 VLGYAAGAYSgLykifpftKTEACGVSCANLKSCF--LIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK---- 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   245 HVGLAFrnLGTLFPRLQQLccrmPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEpgtearRHYDEGIRMG 324
Cdd:TIGR01301 240 HGEEAF--FGELFGAFKYL----PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG------AKYDDGVRAG 307
                         330       340
                  ....*....|....*....|....*.
gi 22122421   325 SLGLFLQCAISLVFSLVMDRLVQKFG 350
Cdd:TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWG 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
17-399 4.81e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 4.81e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLG 95
Cdd:COG2211  11 EKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  96 VLLSLFLIPRAGWLAGLLYpdtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLG 175
Cdd:COG2211  91 LALSFVLLFTAPDLSPTGK-------LIYALVTYLLLGLAYTLVNIPYSALGAELTPDYEERTRLSSWRFAFAGLGGLLA 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 176 YLLPAIdwdtsvLAPYLGTQEE----CLFGLLTLIFLICMAATLFVTEEAVLgPPEPAEGLLVSavsrrccpchVGLAFR 251
Cdd:COG2211 164 SVLPPP------LVAAFGGDAAlgyrLTALIFAVLGLLAFLLTFFGTKERPV-PEEEKVSLKES----------LKALLK 226
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 252 NlgtlfprlqqlccrmpRTLRRLFVAELCSWMALMT----FTLFYTDFVGEGLyqgvpraepgtearrhydegiRMGSLG 327
Cdd:COG2211 227 N----------------RPFLLLLLAYLLFFLALALvaalLLYYFKYVLGLSA---------------------ALVGLL 269
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22122421 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLAS--VMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTL 399
Cdd:COG2211 270 LALYFLAALLGAPLWPRLAKRFGKKKAFIIGllLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPWAM 343
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
8-401 6.27e-10

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 60.76  E-value: 6.27e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   8 SRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRP 87
Cdd:COG2814   2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLAD----RFGRRRV 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  88 FIWALSLGVLLSLfliprAGWLAGllypdtrplELALLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQAFSVYAFM 167
Cdd:COG2814  78 LLLGLLLFALGSL-----LCALAP---------SLWLLLAARFLQGLGAGALFPAALALIADLV-PPERRGRALGLLGAG 142
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 168 ISLGGCLGYLLpaidwdTSVLAPYLGTQEecLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpchvg 247
Cdd:COG2814 143 LGLGPALGPLL------GGLLADLFGWRW--VFLVNAVLALLALLLLLRLLPESRPAARARLRGSLRELLRRP------- 207
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 248 lafrnlgtlfprlqqlccrmprTLRRLFVAELCSWMALMTFTLFYTDFvgeglyqgvpraepgteARRHYDEGIRMGSLG 327
Cdd:COG2814 208 ----------------------RLLLLLLLAFLLGFGFFALFTYLPLY-----------------LQEVLGLSASAAGLL 248
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 22122421 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLAS 401
Cdd:COG2814 249 LALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVA 322
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
37-408 9.70e-08

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 54.35  E-value: 9.70e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  37 TYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLipragWLAGLLYpd 116
Cdd:cd06174  17 PLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLAD----RFGRRPVLLLGLLLFALGALLF-----AFAPSFW-- 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 117 trplelaLLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYLGTQE 196
Cdd:cd06174  86 -------LLLLGRFLLGLGSGLIDPAVLALIADLF-PERERGRALGLLQAFGSVGGILGPLL------GGILASSLGFGW 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 197 ECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRrccpcHVGLAFRNLGTLFprlqqlccrmprtlrrLFV 276
Cdd:cd06174 152 RAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLK-----LLKRVLKNPGLWL----------------LLL 210
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 277 AELCSWMALMTFTLFYTDFVGEGLYQGVpraepgtearrhyDEGIRMGSLGLFLQCAISLVFSLVMDRlvqKFGTRSVYL 356
Cdd:cd06174 211 AIFLVNLAYYSFSTLLPLFLLDLGGLSV-------------AVAGLLLSLFGLAGALGSLLLGLLSDR---LIGRKPLLL 274
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|..
gi 22122421 357 ASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKQ 408
Cdd:cd06174 275 IGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEI 326
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
51-396 1.66e-06

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 50.68  E-value: 1.66e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  51 KFMTMVLGIGP-----------VLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVLLSLFLI---PRAGWLAGLLYpd 116
Cdd:cd17332  24 FFYTDVLGLSAaaagtiflvarIIDAINDPLMGYLIDRTRSRWGRFRPWLLWGAIPLALLFVLLfttPDGSGTGKLIY-- 101
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 117 trplelaLLILGVgLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLGYLLPAIdwdtsvLAPYLGTQE 196
Cdd:cd17332 102 -------ALITYI-LLDLLYTLVNIPYTALIPELTDDPEERTSLTSWRMFFATIGGLLVTVLPPP------LVAYFGGGN 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 197 ECL-----FGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRCcpchvglaFRNlgtlfprlqqlccrmpRTL 271
Cdd:cd17332 168 ASRgyfltALIIGIIGIILLLICFFGTRERVVPPEEEKSKLPLLKSLKAL--------LKN----------------RPF 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 272 RRLFVAELCSWMALM---TFTLFYTDFVgeglyqgvpraepgtearrHYDEGIRMGSLGLFLqcAISLVFSLVMDRLVQK 348
Cdd:cd17332 224 LILLLAYLLYFLAFNivnTVLVYYFKYV-------------------LGGRAELVLLLLLIL--SGALLALLPWPPLKKR 282
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|
gi 22122421 349 FGTRSVYLASVMTFPVAAAATCL--SHSVVVVTASAALTGFTFSALQILP 396
Cdd:cd17332 283 FGKKKAFFIGLLLAILGLLLLFFlpPGNLVLILVLAVLAGIGYGGANLLP 332
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
1-216 1.95e-05

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 47.19  E-value: 1.95e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   1 MIQRLWASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwr 79
Cdd:cd17325 184 SAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELgGLSPAQIGLLFGAQGLASALSQPPAGKLSD--- 260
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  80 gRYGRRRPFIWALSLGVlLSLFLIPRAGWLAGLLypdtrpleLALLILGVGLldfcgQVCFTPLEALLSDLFrDPDHCRQ 159
Cdd:cd17325 261 -RIGRKPLILIGLLLSA-VALLLLPLATSFWLLL--------LLLALLGLGL-----GLVFPATLALLADIV-PPEGRGT 324
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 22122421 160 AFSVYAFMISLGGCLGYLLpaidwdTSVLAPYLGTQEecLFGLLTLIFLICMAATLF 216
Cdd:cd17325 325 AMGLFNTAFSLGMVLGPLL------GGFLYDAFGFAT--PFLAAAALLLLAAVLFLL 373
MFS_1 pfam07690
Major Facilitator Superfamily;
33-403 2.45e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 46.64  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    33 AAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLIPRAGWLagl 112
Cdd:pfam07690  14 LLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSD----RFGRRRVLLIGLLLFALGLLLLLFASSLW--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   113 lypdtrplelaLLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRqAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYL 192
Cdd:pfam07690  87 -----------LLLVLRVLQGLGAGALFPAALALIADWFPPEERGR-ALGLVSAGFGLGAALGPLL------GGLLASLF 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   193 GTQeeCLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSrrccpchvglafrnlgtlfpRLQQLCCRMPRTLR 272
Cdd:pfam07690 149 GWR--AAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIV--------------------AWKALLRDPVLWLL 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   273 RLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepgtearrhydeGIRMGSLGLflqcaISLVFSLVMDRLVQKFGTR 352
Cdd:pfam07690 207 LALLLFGFAFFGLLTYLPLYQEVLGLSALLA----------------GLLLGLGGL-----LGAIGRLLLGRLSDRLGRR 265
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 22122421   353 SVYLASV---MTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLY 403
Cdd:pfam07690 266 RRLLLALlllILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDL 319
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
1-215 5.17e-05

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 45.66  E-value: 5.17e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   1 MIQRLWASRLLRhrkaQLLLVNLLTFGLEVCLAAGITYVppLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrg 80
Cdd:COG2211 220 SLKALLKNRPFL----LLLLAYLLFFLALALVAALLLYY--FKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAK---- 289
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  81 RYGRRRPFIWALSLGVLLSLFLipragWLAGllypdtrPLELALLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQ- 159
Cdd:COG2211 290 RFGKKKAFIIGLLLAALGLLLL-----FFLG-------PGNLWLLLVLAALAGIGLGAILVLPWAMLADVV-DYDEWKTg 356
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22122421 160 ------AFSVYAFMISLGGCLGYLLPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATL 215
Cdd:COG2211 357 rrreglYFGIFTFAIKLGQALAGALAGLLLALFGYVAGAAQSPSALTGIRLLFFLLPAVLLL 418
MFS_1 pfam07690
Major Facilitator Superfamily;
9-175 1.01e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 44.72  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421     9 RLLRHRKAQLLLVNLLTFGLevCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPF 88
Cdd:pfam07690 195 KALLRDPVLWLLLALLLFGF--AFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSD----RLGRRRRL 268
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    89 IWALSLGVLLSLFLIPRAGWLAGLLypdtrpLELALLILGVGLLdfcgqVCFTPLEALLSDLFRdPDHCRQAFSVYAFMI 168
Cdd:pfam07690 269 LLALLLLILAALGLLLLSLTLSSLW------LLLALLLLGFGFG-----LVFPALNALVSDLAP-KEERGTASGLYNTAG 336

                  ....*..
gi 22122421   169 SLGGCLG 175
Cdd:pfam07690 337 SLGGALG 343
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
37-231 1.29e-04

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 44.61  E-value: 1.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421    37 TYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVLLSLFLIpragWLAGLLYP 115
Cdd:pfam13347  18 TYLLYFYTDVlGLSAAAVGLVLLVARLVDAFTDPIVGHIIDRTRTRWGRRRPWLLLSAIILAVSFILL----FTPPELGR 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   116 DTRPLELALLILGVGLLDFCGQVCFTpleALLSDLFRDPDHcRQAFSVYAFMIS-LGGCLGYLLPAIdwdtsVLAPYLGT 194
Cdd:pfam13347  94 APLFIWLLATYILLRIAYTFFEIPYW---SLGPELTRDYDE-RTSLTSYRSFFSvGGGLLAAALAFP-----LVLILGGT 164
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 22122421   195 QEEC----LFGLL-TLIFLICMAATLFVTEEAVLGPPEPAEG 231
Cdd:pfam13347 165 GLERkgyrIFALIgAVLMLLGVIITAAGTKERVSMRSKEDTG 206
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
54-401 1.51e-04

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 44.37  E-value: 1.51e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  54 TMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSlflipragwLAGLLYPDTRPLELALLILGVGLLD 133
Cdd:COG2270  55 GYALAIAGLLVALLAPVLGAIAD----RSGRKKPFLAFFTLLGVLA---------TAALFFVAPGGLWLGLLLFVLANIG 121
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 134 FCGQVCFTplEALLSDLFRDPDHCRqafsVYAFMISLGGCLGYLLPAIDWDTSVLAPYLGTQEECLF----GLLT-LIFL 208
Cdd:COG2270 122 FEGSLVFY--NAFLPDIATPEEIGR----VSGLGWALGYLGGVLLLLINLALFLKPEAFGLPDAGEAvrisFLLTaLWWL 195
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 209 ICMAATLFVTEEAVLGPPEPAEGLLVSavsrrccpchvglAFRNLGTLFPRLqqlccRMPRTLRRLFVAELCSWMALMTF 288
Cdd:COG2270 196 LFALPLFLFLPERPRPGPAPPRGAVRA-------------GFRELRRTLREL-----RRYRDLLRFLLAYFFYRDGVQTV 257
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421 289 TLFYTDFVGEGLyqgvpraepgtearrhydeGIRMGSLGLFLqCAISLV---FSLVMDRLVQKFGTRSVYLASVMTFPVA 365
Cdd:COG2270 258 IAFAGIYAAGVL-------------------GFSTTELIVFG-LLVQIVaalGALLFGRLDDRIGPKRVILVSLVIWIVV 317
                       330       340       350
                ....*....|....*....|....*....|....*.
gi 22122421 366 AAATCLSHSVVVVTASAALTGFTFSALQILPYTLAS 401
Cdd:COG2270 318 CLAAYFLTTALAFWILGLLIGLVMGGIQALSRSLLA 353
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
9-212 3.49e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 42.92  E-value: 3.49e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   9 RLLRHRKAQLLLvnLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRP 87
Cdd:cd17324 193 LLLRNPRLRLAY--LITFLLFGGFFALYTYLAPFLTDVpGFSSSAIIGLLLLFGVAGVVGSPLAGRLAD----RGGRRAL 266
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  88 FIWALSLGVLLSLFLIPRAGWLAgllypdtrplelalLILGVGLLDFCGQVCFTPLEALLSDLfrDPDHCRQAFSVYAFM 167
Cdd:cd17324 267 LIALLLLAAALLLLTLLGPSPLL--------------LLVGLVLWGLGFFAAHSALQTRVLRL--APEARGLASSLYLAA 330
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 22122421 168 ISLGGCLGYLLPAIDWDTSVLAPYLgtqeeCLFGLLTLIFLICMA 212
Cdd:cd17324 331 YNLGGALGAALGGLVLDHGGWAGVG-----WVGAALLLLALLLAL 370
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
4-151 1.08e-03

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 41.74  E-value: 1.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   4 RLWASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRY 82
Cdd:cd17369 216 RAPLVEVLRRHWRALLLAIGLRLAENVLFYLFTTFALSYATQTlGVDRSTVLLAVLIASVVAAITIPLFGWLSD----RV 291
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 22122421  83 GRRRPFIWALSLGVLLSLFLIP----RAGWLAGLLYpdtrpleLALLILGVGLLdfcgqvcFTPLEALLSDLF 151
Cdd:cd17369 292 GRRPVYLAGALLAALFAFPFFWlldtGSTWLIVLAA-------VVVLGVLHGMM-------YGPQAAFLAELF 350
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
9-217 1.49e-03

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 41.02  E-value: 1.49e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   9 RLLRHRKAQLL-LVNLLTFGLEVCLAAgitYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRR 86
Cdd:COG2223 200 EALRDPRFWLLsLLYFGTFGSFIGFSS---WLPPYLVDQfGLSAATAGLLAALFALLGALGRPLGGWLSD----RIGGRR 272
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  87 PFIWALSLGVLLSLFLIpragwlagllypdTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDpdhcRQAFSVYAF 166
Cdd:COG2223 273 VLLIVFALMALGLLLLA-------------LALGSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPT----KNAGAVYGL 335
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 22122421 167 MISLGGCLGYLLPAIdwdTSVLAPYLGTQEEClFGLLTLIFLICMAATLFV 217
Cdd:COG2223 336 VGAAGGLGGFLGPLL---FGALLDATGSYTAA-FLVFAVLALVALVLTLLL 382
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
16-221 1.54e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 41.01  E-value: 1.54e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  16 AQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRpfIWALSL 94
Cdd:COG2271 180 LRFWLLALAYFLVYFALYGFLTWLPTYLVEVrGLSLAQAGLLLSLPFLAGIVGSLLGGWLSD----RLGRRR--KLVLAI 253
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421  95 GVLLSLfliprAGWLAGLLYPDtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFrdPDHCR-QAFSVYAFMISLGGC 173
Cdd:COG2271 254 GLLLAA-----LALLLLALLPS-----PALAIALLFLAGFGLGGAFGLLWALAAELF--PKKARgTASGLVNTFGFLGGA 321
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 22122421 174 L-----GYLLPAIDWDTSvlapylgtqeeclFGLLTLIFLICMAATLFVTEEA 221
Cdd:COG2271 322 LgpllvGYLLDATGYQAA-------------FLLLAALALLAALLALLLLRET 361
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
7-114 4.74e-03

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 39.46  E-value: 4.74e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22122421   7 ASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRR 86
Cdd:cd17478 186 ARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRGYSLVFAGLLLSLFLFAGAIGTLIGGPLSD----RFGRRR 261
                        90       100
                ....*....|....*....|....*...
gi 22122421  87 PFIWALSLGVLLSLFLIPRAGWLAGLLY 114
Cdd:cd17478 262 VIIASLLLAAPFLLLFLLTPGIWSYILL 289
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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