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Conserved domains on  [gi|127139913|ref|NP_598398|]
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ectodysplasin-A receptor-associated adapter protein isoform 1 [Mus musculus]

Protein Classification

Death domain-containing protein( domain architecture ID 10455265)

Death domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Death pfam00531
Death domain;
122-192 5.52e-15

Death domain;


:

Pssm-ID: 459845 [Multi-domain]  Cd Length: 86  Bit Score: 67.39  E-value: 5.52e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 127139913  122 LDPCHPTVKNWRNFASKWGMPYDELCFLEQRPQ---SPTLEFLFRNSQR-----TVGQLMELCRLYHRADVEKILRRWV 192
Cdd:pfam00531   8 LDPPPPLGKDWRELARKLGLSENEIDEIESENPrlrSQTYELLRLWEQRegknaTVGTLLEALRKLGRRDAAEKIQSIL 86
 
Name Accession Description Interval E-value
Death pfam00531
Death domain;
122-192 5.52e-15

Death domain;


Pssm-ID: 459845 [Multi-domain]  Cd Length: 86  Bit Score: 67.39  E-value: 5.52e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 127139913  122 LDPCHPTVKNWRNFASKWGMPYDELCFLEQRPQ---SPTLEFLFRNSQR-----TVGQLMELCRLYHRADVEKILRRWV 192
Cdd:pfam00531   8 LDPPPPLGKDWRELARKLGLSENEIDEIESENPrlrSQTYELLRLWEQRegknaTVGTLLEALRKLGRRDAAEKIQSIL 86
Death_IRAK cd08309
Death domain of Interleukin-1 Receptor-Associated Kinases; Death Domains (DDs) found in ...
122-188 1.37e-04

Death domain of Interleukin-1 Receptor-Associated Kinases; Death Domains (DDs) found in Interleukin-1 (IL-1) Receptor-Associated Kinases (IRAK1-4) and similar proteins. IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. All four types are involved in signal transduction involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinase pathways. IRAK1 and IRAK4 are active kinases while IRAK2 and IRAK-M (also called IRAK3) are inactive. In general, IRAKs are expressed ubiquitously, except for IRAK-M which is detected only in macrophages. The insect homologs, Pelle and Tube, are important components of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in the innate immune response. Most members have an N-terminal DD followed by a kinase domain. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260023  Cd Length: 88  Bit Score: 39.25  E-value: 1.37e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 127139913 122 LDPCHPtvKNWRNFASKwgMPYD----ELC-FLEQRPQSPTLEFLF--RNSQRTVGQLME-LCRLYHRADVEKIL 188
Cdd:cd08309   18 LDALEL--AGWRQLASL--IPYDqtdvRQIeSMKQRGQSPTRELLWdwGTQNATVQDLVQlLTQLGLFRAADLIT 88
 
Name Accession Description Interval E-value
Death pfam00531
Death domain;
122-192 5.52e-15

Death domain;


Pssm-ID: 459845 [Multi-domain]  Cd Length: 86  Bit Score: 67.39  E-value: 5.52e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 127139913  122 LDPCHPTVKNWRNFASKWGMPYDELCFLEQRPQ---SPTLEFLFRNSQR-----TVGQLMELCRLYHRADVEKILRRWV 192
Cdd:pfam00531   8 LDPPPPLGKDWRELARKLGLSENEIDEIESENPrlrSQTYELLRLWEQRegknaTVGTLLEALRKLGRRDAAEKIQSIL 86
Death_IRAK cd08309
Death domain of Interleukin-1 Receptor-Associated Kinases; Death Domains (DDs) found in ...
122-188 1.37e-04

Death domain of Interleukin-1 Receptor-Associated Kinases; Death Domains (DDs) found in Interleukin-1 (IL-1) Receptor-Associated Kinases (IRAK1-4) and similar proteins. IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. All four types are involved in signal transduction involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinase pathways. IRAK1 and IRAK4 are active kinases while IRAK2 and IRAK-M (also called IRAK3) are inactive. In general, IRAKs are expressed ubiquitously, except for IRAK-M which is detected only in macrophages. The insect homologs, Pelle and Tube, are important components of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in the innate immune response. Most members have an N-terminal DD followed by a kinase domain. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260023  Cd Length: 88  Bit Score: 39.25  E-value: 1.37e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 127139913 122 LDPCHPtvKNWRNFASKwgMPYD----ELC-FLEQRPQSPTLEFLF--RNSQRTVGQLME-LCRLYHRADVEKIL 188
Cdd:cd08309   18 LDALEL--AGWRQLASL--IPYDqtdvRQIeSMKQRGQSPTRELLWdwGTQNATVQDLVQlLTQLGLFRAADLIT 88
Death_MyD88 cd08312
Death domain of Myeloid Differentation primary response protein MyD88; Death Domain (DD) of ...
122-184 4.23e-03

Death domain of Myeloid Differentation primary response protein MyD88; Death Domain (DD) of Myeloid Differentiation primary response protein 88 (MyD88). MyD88 is an adaptor protein involved in interleukin-1 receptor (IL-1R)- and Toll-like receptor (TLR)-induced activation of nuclear factor-kappaB (NF-kB) and mitogen activated protein kinase pathways that lead to the induction of proinflammatory cytokines. It is a key component in the signaling pathway of pathogen recognition in the innate immune system. MyD88 contains an N-terminal DD and a C-terminal Toll/IL-1 Receptor (TIR) homology domain that mediates interaction with TLRs and IL-1R. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260026  Cd Length: 79  Bit Score: 34.88  E-value: 4.23e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 127139913 122 LDPCHPTVKNWRNFASKWGMPYDELCFLEQRPqSPTLEFLF----RNSQRTVGQLMELCRLYHRADV 184
Cdd:cd08312    9 LNPEKVVANDWRGLAELMGFDYLEIRNFERQS-SPTERLLEdwetRPPGATVGNLLEILEELERKDV 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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