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Conserved domains on  [gi|1577429091|ref|NP_061298|]
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formin-binding protein 4 isoform 1 [Mus musculus]

Protein Classification

WW domain-containing protein( domain architecture ID 10449607)

WW domain-containing protein; the WW domain mediates protein-protein interaction via proline-rich motifs, such as PPxY

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
WW cd00201
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ...
605-636 4.12e-08

Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.


:

Pssm-ID: 238122 [Multi-domain]  Cd Length: 31  Bit Score: 49.83  E-value: 4.12e-08
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1577429091  605 PKGWSCHWDRDHRRYFYvNEQSGESQWEFPDG 636
Cdd:cd00201      1 PPGWEERWDPDGRVYYY-NHNTKETQWEDPRE 31
WW pfam00397
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ...
222-249 1.35e-07

WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.


:

Pssm-ID: 459800 [Multi-domain]  Cd Length: 30  Bit Score: 48.27  E-value: 1.35e-07
                           10        20
                   ....*....|....*....|....*...
gi 1577429091  222 DWQEVWDENtGCYYYWNTQTNEVTWELP 249
Cdd:pfam00397    4 GWEERWDPD-GRVYYYNHETGETQWEKP 30
 
Name Accession Description Interval E-value
WW cd00201
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ...
605-636 4.12e-08

Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.


Pssm-ID: 238122 [Multi-domain]  Cd Length: 31  Bit Score: 49.83  E-value: 4.12e-08
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1577429091  605 PKGWSCHWDRDHRRYFYvNEQSGESQWEFPDG 636
Cdd:cd00201      1 PPGWEERWDPDGRVYYY-NHNTKETQWEDPRE 31
WW pfam00397
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ...
222-249 1.35e-07

WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.


Pssm-ID: 459800 [Multi-domain]  Cd Length: 30  Bit Score: 48.27  E-value: 1.35e-07
                           10        20
                   ....*....|....*....|....*...
gi 1577429091  222 DWQEVWDENtGCYYYWNTQTNEVTWELP 249
Cdd:pfam00397    4 GWEERWDPD-GRVYYYNHETGETQWEKP 30
WW pfam00397
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ...
605-634 2.59e-07

WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.


Pssm-ID: 459800 [Multi-domain]  Cd Length: 30  Bit Score: 47.50  E-value: 2.59e-07
                           10        20        30
                   ....*....|....*....|....*....|
gi 1577429091  605 PKGWSCHWDRDhRRYFYVNEQSGESQWEFP 634
Cdd:pfam00397    2 PPGWEERWDPD-GRVYYYNHETGETQWEKP 30
WW cd00201
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ...
221-249 1.21e-06

Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.


Pssm-ID: 238122 [Multi-domain]  Cd Length: 31  Bit Score: 45.60  E-value: 1.21e-06
                           10        20
                   ....*....|....*....|....*....
gi 1577429091  221 GDWQEVWDENtGCYYYWNTQTNEVTWELP 249
Cdd:cd00201      2 PGWEERWDPD-GRVYYYNHNTKETQWEDP 29
WW smart00456
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ...
605-636 2.74e-06

Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.


Pssm-ID: 197736 [Multi-domain]  Cd Length: 33  Bit Score: 44.90  E-value: 2.74e-06
                            10        20        30
                    ....*....|....*....|....*....|..
gi 1577429091   605 PKGWSCHWDRDhRRYFYVNEQSGESQWEFPDG 636
Cdd:smart00456    3 PPGWEERKDPD-GRPYYYNHETKETQWEKPRE 33
WW smart00456
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ...
223-250 1.29e-05

Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.


Pssm-ID: 197736 [Multi-domain]  Cd Length: 33  Bit Score: 42.97  E-value: 1.29e-05
                            10        20
                    ....*....|....*....|....*...
gi 1577429091   223 WQEVWDENtGCYYYWNTQTNEVTWELPQ 250
Cdd:smart00456    6 WEERKDPD-GRPYYYNHETKETQWEKPR 32
 
Name Accession Description Interval E-value
WW cd00201
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ...
605-636 4.12e-08

Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.


Pssm-ID: 238122 [Multi-domain]  Cd Length: 31  Bit Score: 49.83  E-value: 4.12e-08
                           10        20        30
                   ....*....|....*....|....*....|..
gi 1577429091  605 PKGWSCHWDRDHRRYFYvNEQSGESQWEFPDG 636
Cdd:cd00201      1 PPGWEERWDPDGRVYYY-NHNTKETQWEDPRE 31
WW pfam00397
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ...
222-249 1.35e-07

WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.


Pssm-ID: 459800 [Multi-domain]  Cd Length: 30  Bit Score: 48.27  E-value: 1.35e-07
                           10        20
                   ....*....|....*....|....*...
gi 1577429091  222 DWQEVWDENtGCYYYWNTQTNEVTWELP 249
Cdd:pfam00397    4 GWEERWDPD-GRVYYYNHETGETQWEKP 30
WW pfam00397
WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds ...
605-634 2.59e-07

WW domain; The WW domain is a protein module with two highly conserved tryptophans that binds proline-rich peptide motifs in vitro.


Pssm-ID: 459800 [Multi-domain]  Cd Length: 30  Bit Score: 47.50  E-value: 2.59e-07
                           10        20        30
                   ....*....|....*....|....*....|
gi 1577429091  605 PKGWSCHWDRDhRRYFYVNEQSGESQWEFP 634
Cdd:pfam00397    2 PPGWEERWDPD-GRVYYYNHETGETQWEKP 30
WW cd00201
Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; ...
221-249 1.21e-06

Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other peptide recognition proteins such as antibodies and receptors; WW domains have a single groove formed by a conserved Trp and Tyr which recognizes a pair of residues of the sequence X-Pro; variable loops and neighboring domains confer specificity in this domain; there are five distinct groups based on binding: 1) PPXY motifs 2) the PPLP motif; 3) PGM motifs; 4) PSP or PTP motifs; 5) PR motifs.


Pssm-ID: 238122 [Multi-domain]  Cd Length: 31  Bit Score: 45.60  E-value: 1.21e-06
                           10        20
                   ....*....|....*....|....*....
gi 1577429091  221 GDWQEVWDENtGCYYYWNTQTNEVTWELP 249
Cdd:cd00201      2 PGWEERWDPD-GRVYYYNHNTKETQWEDP 29
WW smart00456
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ...
605-636 2.74e-06

Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.


Pssm-ID: 197736 [Multi-domain]  Cd Length: 33  Bit Score: 44.90  E-value: 2.74e-06
                            10        20        30
                    ....*....|....*....|....*....|..
gi 1577429091   605 PKGWSCHWDRDhRRYFYVNEQSGESQWEFPDG 636
Cdd:smart00456    3 PPGWEERKDPD-GRPYYYNHETKETQWEKPRE 33
WW smart00456
Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds ...
223-250 1.29e-05

Domain with 2 conserved Trp (W) residues; Also known as the WWP or rsp5 domain. Binds proline-rich polypeptides.


Pssm-ID: 197736 [Multi-domain]  Cd Length: 33  Bit Score: 42.97  E-value: 1.29e-05
                            10        20
                    ....*....|....*....|....*...
gi 1577429091   223 WQEVWDENtGCYYYWNTQTNEVTWELPQ 250
Cdd:smart00456    6 WEERKDPD-GRPYYYNHETKETQWEKPR 32
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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