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Conserved domains on  [gi|6755582|ref|NP_035551|]
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sphingomyelin phosphodiesterase precursor [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MPP_ASMase cd00842
acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase ...
199-494 2.43e-138

acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


:

Pssm-ID: 277321 [Multi-domain]  Cd Length: 294  Bit Score: 405.14  E-value: 2.43e-138
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  199 VLFLTDLHWDHEYLEG-TDPYCADPLCCRRGSGwPPNSQKGAGFWGEYsKCDLPLRTLESLLKGLGP-AGPFEMVYWTGD 276
Cdd:cd00842   1 FLHISDIHYDPLYKVGsEYANCRSPLCCRDESG-PGDVKPPAGYWGTY-GCDSPWSLVESALEAIKKnHPKPDFILWTGD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  277 IPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIkgnqSSQWLYEAMAKAWEPWLPADAL 356
Cdd:cd00842  79 LVRHDVDEQTPEETVESESNLTNLLKKYFPNVPVYPALGNHDSYPVNQFPPHSN----SPSWLYDALAELWKPWLPTEAK 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  357 HTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGH--CLKSWS 434
Cdd:cd00842 155 ETFKKGGYYSVDVKDGLRVISLNTNLYYKKNFWLYSNNTDPCGQLQWLEDELEDAEQKGEKVWIIGHIPPGLnsYDADWS 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  435 WNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYR 494
Cdd:cd00842 235 ERFYQIINRYSDTIAGQFFGHTHRDEFRVFYDDKDTGSPINVAYIAPSVTPYTGNNPSFR 294
ASMase_C super family cl44707
Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the ...
472-593 1.39e-09

Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the C-terminal region of the phosphodiesterase domain found in acid sphingomyelin phosphodiesterases. It contains two disulphide bridges.


The actual alignment was detected with superfamily member pfam19272:

Pssm-ID: 466022  Cd Length: 143  Bit Score: 56.61  E-value: 1.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582    472 RPLAVAFLAPSATTFINL------NPGYRVYQID-GNYPgsshvVLDHETYILNLTQANAAGgTPSWKRLYRARETYGLP 544
Cdd:pfam19272   1 NPVNSLFVAPAVTPVKSVlekesnNPGVRLYQYDpKDYK-----LLDMLQYYLNLTEANLKG-ESNWKLEYILTKAYGIE 74
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6755582    545 DAMPASWHNLVYR-MRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCA 593
Cdd:pfam19272  75 DLQPQSLYGLAKQfAVPHSKQFEKYYNYFFVSYDSSIVCEGGCKALQICA 124
SapB smart00741
Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary ...
85-158 8.35e-09

Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.


:

Pssm-ID: 214797 [Multi-domain]  Cd Length: 76  Bit Score: 52.49  E-value: 8.35e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6755582      85 LTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWtRSVLSPSEACGLL 158
Cdd:smart00741   1 LLCELCEFVVKQLENLLKDNKTEEEIKKALEKVCKKLPKSLSDQCKEFVDQYGPEIIDLL-EQGLDPKDVCQKL 73
 
Name Accession Description Interval E-value
MPP_ASMase cd00842
acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase ...
199-494 2.43e-138

acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277321 [Multi-domain]  Cd Length: 294  Bit Score: 405.14  E-value: 2.43e-138
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  199 VLFLTDLHWDHEYLEG-TDPYCADPLCCRRGSGwPPNSQKGAGFWGEYsKCDLPLRTLESLLKGLGP-AGPFEMVYWTGD 276
Cdd:cd00842   1 FLHISDIHYDPLYKVGsEYANCRSPLCCRDESG-PGDVKPPAGYWGTY-GCDSPWSLVESALEAIKKnHPKPDFILWTGD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  277 IPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIkgnqSSQWLYEAMAKAWEPWLPADAL 356
Cdd:cd00842  79 LVRHDVDEQTPEETVESESNLTNLLKKYFPNVPVYPALGNHDSYPVNQFPPHSN----SPSWLYDALAELWKPWLPTEAK 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  357 HTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGH--CLKSWS 434
Cdd:cd00842 155 ETFKKGGYYSVDVKDGLRVISLNTNLYYKKNFWLYSNNTDPCGQLQWLEDELEDAEQKGEKVWIIGHIPPGLnsYDADWS 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  435 WNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYR 494
Cdd:cd00842 235 ERFYQIINRYSDTIAGQFFGHTHRDEFRVFYDDKDTGSPINVAYIAPSVTPYTGNNPSFR 294
CpdA COG1409
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];
251-501 6.35e-11

3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];


Pssm-ID: 441019 [Multi-domain]  Cd Length: 234  Bit Score: 62.79  E-value: 6.35e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  251 PLRTLESLLKGLgPAGPFEMVYWTGDIpAHDvwqqSRQDQLRALTtitDLVRKFlgPVPVYPAVGNHEstpvngfpppfi 330
Cdd:COG1409  19 TAEVLAAALADI-NAPRPDFVVVTGDL-TDD----GEPEEYAAAR---EILARL--GVPVYVVPGNHD------------ 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  331 kgnqssqwLYEAMAKAWEpwlpaDALHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLlinstdPAGQLQWLVEELQA 410
Cdd:COG1409  76 --------IRAAMAEAYR-----EYFGDLPPGGLYYSFDYGGVRFIGLDSNVPGRSSGEL------GPEQLAWLEEELAA 136
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  411 AENRgdKVHIIGHIPPGHCLkSWSWNYY--------KIIARYENTLAgqFFGHTHVDefeifYDEETLSRPLAVaflAPS 482
Cdd:COG1409 137 APAK--PVIVFLHHPPYSTG-SGSDRIGlrnaeellALLARYGVDLV--LSGHVHRY-----ERTRRDGVPYIV---AGS 203
                       250
                ....*....|....*....
gi 6755582  483 ATTFINLNPGYRVYQIDGN 501
Cdd:COG1409 204 TGGQVRLPPGYRVIEVDGD 222
ASMase_C pfam19272
Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the ...
472-593 1.39e-09

Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the C-terminal region of the phosphodiesterase domain found in acid sphingomyelin phosphodiesterases. It contains two disulphide bridges.


Pssm-ID: 466022  Cd Length: 143  Bit Score: 56.61  E-value: 1.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582    472 RPLAVAFLAPSATTFINL------NPGYRVYQID-GNYPgsshvVLDHETYILNLTQANAAGgTPSWKRLYRARETYGLP 544
Cdd:pfam19272   1 NPVNSLFVAPAVTPVKSVlekesnNPGVRLYQYDpKDYK-----LLDMLQYYLNLTEANLKG-ESNWKLEYILTKAYGIE 74
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6755582    545 DAMPASWHNLVYR-MRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCA 593
Cdd:pfam19272  75 DLQPQSLYGLAKQfAVPHSKQFEKYYNYFFVSYDSSIVCEGGCKALQICA 124
SapB smart00741
Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary ...
85-158 8.35e-09

Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.


Pssm-ID: 214797 [Multi-domain]  Cd Length: 76  Bit Score: 52.49  E-value: 8.35e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6755582      85 LTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWtRSVLSPSEACGLL 158
Cdd:smart00741   1 LLCELCEFVVKQLENLLKDNKTEEEIKKALEKVCKKLPKSLSDQCKEFVDQYGPEIIDLL-EQGLDPKDVCQKL 73
Metallophos pfam00149
Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, ...
252-349 7.05e-05

Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.


Pssm-ID: 459691 [Multi-domain]  Cd Length: 114  Bit Score: 42.59  E-value: 7.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582    252 LRTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQQsrqdqlraltTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIK 331
Cdd:pfam00149  15 LDDLLELLKKLLEEGKPDLVLHAGDLVDRGPPSE----------EVLELLERLIKYVPVYLVRGNHDFDYGECLRLYPYL 84
                          90
                  ....*....|....*...
gi 6755582    332 GNQSSQWLYEAMAKAWEP 349
Cdd:pfam00149  85 GLLARPWKRFLEVFNFLP 102
 
Name Accession Description Interval E-value
MPP_ASMase cd00842
acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase ...
199-494 2.43e-138

acid sphingomyelinase and related proteins, metallophosphatase domain; Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277321 [Multi-domain]  Cd Length: 294  Bit Score: 405.14  E-value: 2.43e-138
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  199 VLFLTDLHWDHEYLEG-TDPYCADPLCCRRGSGwPPNSQKGAGFWGEYsKCDLPLRTLESLLKGLGP-AGPFEMVYWTGD 276
Cdd:cd00842   1 FLHISDIHYDPLYKVGsEYANCRSPLCCRDESG-PGDVKPPAGYWGTY-GCDSPWSLVESALEAIKKnHPKPDFILWTGD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  277 IPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIkgnqSSQWLYEAMAKAWEPWLPADAL 356
Cdd:cd00842  79 LVRHDVDEQTPEETVESESNLTNLLKKYFPNVPVYPALGNHDSYPVNQFPPHSN----SPSWLYDALAELWKPWLPTEAK 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  357 HTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGH--CLKSWS 434
Cdd:cd00842 155 ETFKKGGYYSVDVKDGLRVISLNTNLYYKKNFWLYSNNTDPCGQLQWLEDELEDAEQKGEKVWIIGHIPPGLnsYDADWS 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  435 WNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYR 494
Cdd:cd00842 235 ERFYQIINRYSDTIAGQFFGHTHRDEFRVFYDDKDTGSPINVAYIAPSVTPYTGNNPSFR 294
CpdA COG1409
3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];
251-501 6.35e-11

3',5'-cyclic AMP phosphodiesterase CpdA [Signal transduction mechanisms];


Pssm-ID: 441019 [Multi-domain]  Cd Length: 234  Bit Score: 62.79  E-value: 6.35e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  251 PLRTLESLLKGLgPAGPFEMVYWTGDIpAHDvwqqSRQDQLRALTtitDLVRKFlgPVPVYPAVGNHEstpvngfpppfi 330
Cdd:COG1409  19 TAEVLAAALADI-NAPRPDFVVVTGDL-TDD----GEPEEYAAAR---EILARL--GVPVYVVPGNHD------------ 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  331 kgnqssqwLYEAMAKAWEpwlpaDALHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLlinstdPAGQLQWLVEELQA 410
Cdd:COG1409  76 --------IRAAMAEAYR-----EYFGDLPPGGLYYSFDYGGVRFIGLDSNVPGRSSGEL------GPEQLAWLEEELAA 136
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  411 AENRgdKVHIIGHIPPGHCLkSWSWNYY--------KIIARYENTLAgqFFGHTHVDefeifYDEETLSRPLAVaflAPS 482
Cdd:COG1409 137 APAK--PVIVFLHHPPYSTG-SGSDRIGlrnaeellALLARYGVDLV--LSGHVHRY-----ERTRRDGVPYIV---AGS 203
                       250
                ....*....|....*....
gi 6755582  483 ATTFINLNPGYRVYQIDGN 501
Cdd:COG1409 204 TGGQVRLPPGYRVIEVDGD 222
ASMase_C pfam19272
Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the ...
472-593 1.39e-09

Acid sphingomyelin phosphodiesterase C-terminal region; This entry corresponds to the C-terminal region of the phosphodiesterase domain found in acid sphingomyelin phosphodiesterases. It contains two disulphide bridges.


Pssm-ID: 466022  Cd Length: 143  Bit Score: 56.61  E-value: 1.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582    472 RPLAVAFLAPSATTFINL------NPGYRVYQID-GNYPgsshvVLDHETYILNLTQANAAGgTPSWKRLYRARETYGLP 544
Cdd:pfam19272   1 NPVNSLFVAPAVTPVKSVlekesnNPGVRLYQYDpKDYK-----LLDMLQYYLNLTEANLKG-ESNWKLEYILTKAYGIE 74
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 6755582    545 DAMPASWHNLVYR-MRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCA 593
Cdd:pfam19272  75 DLQPQSLYGLAKQfAVPHSKQFEKYYNYFFVSYDSSIVCEGGCKALQICA 124
SapB smart00741
Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary ...
85-158 8.35e-09

Saposin (B) Domains; Present in multiple copies in prosaposin and in pulmonary surfactant-associated protein B. In plant aspartic proteinases, a saposin domain is circularly permuted. This causes the prediction algorithm to predict two such domains, where only one is truly present.


Pssm-ID: 214797 [Multi-domain]  Cd Length: 76  Bit Score: 52.49  E-value: 8.35e-09
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6755582      85 LTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWtRSVLSPSEACGLL 158
Cdd:smart00741   1 LLCELCEFVVKQLENLLKDNKTEEEIKKALEKVCKKLPKSLSDQCKEFVDQYGPEIIDLL-EQGLDPKDVCQKL 73
MPP_Nbla03831 cd07396
Homo sapiens Nbla03831 and related proteins, metallophosphatase domain; Nbla03831 (also known ...
275-465 5.74e-08

Homo sapiens Nbla03831 and related proteins, metallophosphatase domain; Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.


Pssm-ID: 277341 [Multi-domain]  Cd Length: 245  Bit Score: 54.26  E-value: 5.74e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  275 GDIpahdVWQQSRQDQ-LRALTTITDLVRKFlgPVPVYPAVGNHEstpVNGFPPPFIKGNQSSqwlyEAMAKAWepwlpa 353
Cdd:cd07396  54 GDI----IDGYNAKDRsKEALDAVLSILDRL--KGPVHHVLGNHE---FYNFPREYLNHLKTL----NGEDAYY------ 114
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582  354 dalhtlriggfYALTPRPGLRLISLNmnfcsrenfWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIP------PG 427
Cdd:cd07396 115 -----------YSFSPGPGFRFLVLD---------FVKFNGGIGEEQLAWLRNELTSADANGEKVIVLSHLPiypeaaDP 174
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 6755582  428 HCLkswSWNY---YKIIARYENtLAGQFFGHTH-----VDEFEIFY 465
Cdd:cd07396 175 QCL---LWNYeevLAILESYPC-VKACFSGHNHeggyeQDSHGVHH 216
Metallophos pfam00149
Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, ...
252-349 7.05e-05

Calcineurin-like phosphoesterase; This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.


Pssm-ID: 459691 [Multi-domain]  Cd Length: 114  Bit Score: 42.59  E-value: 7.05e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6755582    252 LRTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQQsrqdqlraltTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIK 331
Cdd:pfam00149  15 LDDLLELLKKLLEEGKPDLVLHAGDLVDRGPPSE----------EVLELLERLIKYVPVYLVRGNHDFDYGECLRLYPYL 84
                          90
                  ....*....|....*...
gi 6755582    332 GNQSSQWLYEAMAKAWEP 349
Cdd:pfam00149  85 GLLARPWKRFLEVFNFLP 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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