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Conserved domains on  [gi|6678297|ref|NP_033383|]
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protein TEX261 [Mus musculus]

Protein Classification

SVP26/TEX261 family protein( domain architecture ID 10514295)

SVP26/TEX261 family protein similar to Saccharomyces cerevisiae protein SVP26 (Sed5 compartment vesicle protein of 26 kDa) that plays a role in retention of a subset of membrane proteins in the early Golgi compartments

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Erv26 pfam04148
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-186 3.65e-70

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


:

Pssm-ID: 461197  Cd Length: 202  Bit Score: 211.64  E-value: 3.65e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297      1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297     81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAE------------EYYPFSEVLAYFTFCLWIIPFAFFVSLSAGE 148
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNpqfradpnydppRRPSFTEIASFFGLCVWLVPFALFVSLSAGD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 6678297    149 NVLPSTMQP---GDDVVSNYFTKGKRGKRLGIL-VVFSFIKE 186
Cdd:pfam04148 161 NVLPTMGSEyasGGSSSSDDVGSKSKKKRIGLAkAVVDGVRE 202
 
Name Accession Description Interval E-value
Erv26 pfam04148
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-186 3.65e-70

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


Pssm-ID: 461197  Cd Length: 202  Bit Score: 211.64  E-value: 3.65e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297      1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297     81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAE------------EYYPFSEVLAYFTFCLWIIPFAFFVSLSAGE 148
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNpqfradpnydppRRPSFTEIASFFGLCVWLVPFALFVSLSAGD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 6678297    149 NVLPSTMQP---GDDVVSNYFTKGKRGKRLGIL-VVFSFIKE 186
Cdd:pfam04148 161 NVLPTMGSEyasGGSSSSDDVGSKSKKKRIGLAkAVVDGVRE 202
 
Name Accession Description Interval E-value
Erv26 pfam04148
Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII ...
 1-186 3.65e-70

Transmembrane adaptor Erv26; Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles.


Pssm-ID: 461197  Cd Length: 202  Bit Score: 211.64  E-value: 3.65e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297      1 MWFMYVLSWLSLFIQVAFITLAVAAGLYYLAELIEEYTVATSRIIKYMIWFSTAVLIGLYVFERFPTSMIGVGLFTNLVY 80
Cdd:pfam04148   1 MWILPLLSYLGTVVGFLFLTLSIASGLYYLSELVEEHTVPAKRFLTRLIYFIIAIQVLLWLFDGFPFTLTLFSIFSHVVY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6678297     81 FGLLQTFPFIMLTSPNFILSCGLVVVNHYLAFQFFAE------------EYYPFSEVLAYFTFCLWIIPFAFFVSLSAGE 148
Cdd:pfam04148  81 LQNLRRFPFVSLTSPLFILSCVLVVLNHYLWFRHFSNpqfradpnydppRRPSFTEIASFFGLCVWLVPFALFVSLSAGD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 6678297    149 NVLPSTMQP---GDDVVSNYFTKGKRGKRLGIL-VVFSFIKE 186
Cdd:pfam04148 161 NVLPTMGSEyasGGSSSSDDVGSKSKKKRIGLAkAVVDGVRE 202
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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