72 kDa type IV collagenase preproprotein [Mus musculus]
Protein Classification
ZnMc_MMP and HX domain-containing protein( domain architecture ID 12021233)
protein containing domains PG_binding_1, ZnMc_MMP, FN2, and HX
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||||
| HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
468-662 | 1.30e-77 | ||||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. : Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 245.68 E-value: 1.30e-77
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| Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
118-446 | 4.26e-67 | ||||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. : Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 216.71 E-value: 4.26e-67
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
342-390 | 6.11e-24 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 6.11e-24
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
284-332 | 2.99e-23 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 92.75 E-value: 2.99e-23
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
226-274 | 4.61e-22 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 89.28 E-value: 4.61e-22
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| PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
70-97 | 4.49e-04 | ||||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. : Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 38.65 E-value: 4.49e-04
|
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| Name | Accession | Description | Interval | E-value | ||||||
| HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
468-662 | 1.30e-77 | ||||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 245.68 E-value: 1.30e-77
|
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| Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
118-446 | 4.26e-67 | ||||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 216.71 E-value: 4.26e-67
|
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| ZnMc_MMP | cd04278 | Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
118-446 | 1.38e-59 | ||||||
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases). Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 196.66 E-value: 1.38e-59
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
342-390 | 6.11e-24 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 6.11e-24
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
284-332 | 2.99e-23 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 92.75 E-value: 2.99e-23
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
226-274 | 4.61e-22 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 89.28 E-value: 4.61e-22
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
343-390 | 6.96e-22 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 88.90 E-value: 6.96e-22
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
285-332 | 4.47e-21 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 86.59 E-value: 4.47e-21
|
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| ZnMc | smart00235 | Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ... |
115-218 | 1.08e-19 | ||||||
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site. Pssm-ID: 214576 [Multi-domain] Cd Length: 139 Bit Score: 85.87 E-value: 1.08e-19
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
227-274 | 1.98e-19 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 81.97 E-value: 1.98e-19
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
291-332 | 1.59e-18 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 79.15 E-value: 1.59e-18
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
233-274 | 1.80e-18 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 79.15 E-value: 1.80e-18
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
349-390 | 1.27e-17 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 76.45 E-value: 1.27e-17
|
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| HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
570-616 | 5.80e-11 | ||||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 57.64 E-value: 5.80e-11
|
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| Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
570-612 | 8.78e-09 | ||||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 51.41 E-value: 8.78e-09
|
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| PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
70-97 | 4.49e-04 | ||||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 38.65 E-value: 4.49e-04
|
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| Name | Accession | Description | Interval | E-value | ||||||
| HX | cd00094 | Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
468-662 | 1.30e-77 | ||||||
Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat. Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 245.68 E-value: 1.30e-77
|
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| Peptidase_M10 | pfam00413 | Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
118-446 | 4.26e-67 | ||||||
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 216.71 E-value: 4.26e-67
|
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| ZnMc_MMP | cd04278 | Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
118-446 | 1.38e-59 | ||||||
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases). Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 196.66 E-value: 1.38e-59
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
342-390 | 6.11e-24 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 94.67 E-value: 6.11e-24
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
284-332 | 2.99e-23 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 92.75 E-value: 2.99e-23
|
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| FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
226-274 | 4.61e-22 | ||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 89.28 E-value: 4.61e-22
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
343-390 | 6.96e-22 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 88.90 E-value: 6.96e-22
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
285-332 | 4.47e-21 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 86.59 E-value: 4.47e-21
|
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| ZnMc | smart00235 | Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a ... |
115-218 | 1.08e-19 | ||||||
Zinc-dependent metalloprotease; Neutral zinc metallopeptidases. This alignment represents a subset of known subfamilies. Highest similarity occurs in the HExxH zinc-binding site/ active site. Pssm-ID: 214576 [Multi-domain] Cd Length: 139 Bit Score: 85.87 E-value: 1.08e-19
|
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| FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
227-274 | 1.98e-19 | ||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 81.97 E-value: 1.98e-19
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
291-332 | 1.59e-18 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 79.15 E-value: 1.59e-18
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
233-274 | 1.80e-18 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 79.15 E-value: 1.80e-18
|
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| fn2 | pfam00040 | Fibronectin type II domain; |
349-390 | 1.27e-17 | ||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 76.45 E-value: 1.27e-17
|
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| HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
570-616 | 5.80e-11 | ||||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 57.64 E-value: 5.80e-11
|
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| Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
570-612 | 8.78e-09 | ||||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 51.41 E-value: 8.78e-09
|
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| ZnMc_MMP_like_1 | cd04279 | Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and ... |
387-446 | 7.31e-07 | ||||||
Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin. Pssm-ID: 239806 [Multi-domain] Cd Length: 156 Bit Score: 49.38 E-value: 7.31e-07
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| Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
522-565 | 7.66e-07 | ||||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 46.02 E-value: 7.66e-07
|
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| HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
522-565 | 9.82e-06 | ||||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 43.00 E-value: 9.82e-06
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| ZnMc_serralysin_like | cd04277 | Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases ... |
364-446 | 1.28e-05 | ||||||
Zinc-dependent metalloprotease, serralysin_like subfamily. Serralysins and related proteases are important virulence factors in pathogenic bacteria. They may be secreted into the medium via a mechanism found in gram-negative bacteria, that does not require n-terminal signal sequences which are cleaved after the transmembrane translocation. A calcium-binding domain c-terminal to the metalloprotease domain, which contains multiple tandem repeats of a nine-residue motif including the pattern GGxGxD, and which forms a parallel beta roll may be involved in the translocation mechanism and/or substrate binding. Serralysin family members may have a broad spectrum of substrates each, including host immunoglobulins, complement proteins, cell matrix and cytoskeletal proteins, as well as antimicrobial peptides. Pssm-ID: 239804 [Multi-domain] Cd Length: 186 Bit Score: 46.25 E-value: 1.28e-05
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| ZnMc | cd00203 | Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major ... |
394-445 | 1.50e-05 | ||||||
Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease. Pssm-ID: 238124 [Multi-domain] Cd Length: 167 Bit Score: 45.59 E-value: 1.50e-05
|
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| HX | smart00120 | Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
477-519 | 1.11e-04 | ||||||
Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 39.92 E-value: 1.11e-04
|
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| PG_binding_1 | pfam01471 | Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This ... |
70-97 | 4.49e-04 | ||||||
Putative peptidoglycan binding domain; This domain is composed of three alpha helices. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. Pssm-ID: 460223 [Multi-domain] Cd Length: 57 Bit Score: 38.65 E-value: 4.49e-04
|
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| Hemopexin | pfam00045 | Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ... |
477-519 | 1.65e-03 | ||||||
Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs). Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 36.78 E-value: 1.65e-03
|
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| ZnMc | cd00203 | Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major ... |
124-222 | 2.65e-03 | ||||||
Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which are involved in vertebrate development and disease. Pssm-ID: 238124 [Multi-domain] Cd Length: 167 Bit Score: 39.04 E-value: 2.65e-03
|
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| ZnMc_MMP_like | cd04268 | Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix ... |
400-445 | 5.12e-03 | ||||||
Zinc-dependent metalloprotease, MMP_like subfamily. This group contains matrix metalloproteinases (MMPs), serralysins, and the astacin_like family of proteases. Pssm-ID: 239796 [Multi-domain] Cd Length: 165 Bit Score: 38.25 E-value: 5.12e-03
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| Blast search parameters | ||||
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