NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|40556608|ref|NP_032328|]
View 

heat shock protein HSP 90-beta [Mus musculus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
HSP90 super family cl46693
Hsp90 protein;
14-724 0e+00

Hsp90 protein;


The actual alignment was detected with superfamily member PTZ00272:

Pssm-ID: 481033  Cd Length: 701  Bit Score: 940.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:PTZ00272   4 TFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   94 TKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 173
Cdd:PTZ00272  84 TKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPES 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  174 PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKedeekPKIEDV 253
Cdd:PTZ00272 164 DMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEE-----PKVEEV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  254 gsDEEDDSGKDKKKKTKKIKEKYIDQeelNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALL 333
Cdd:PTZ00272 239 --KEGDEGKKKKTKKVKEVTKEYEVQ---NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIM 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  334 FIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCL 413
Cdd:PTZ00272 314 FVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCL 393
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  414 ELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQ 493
Cdd:PTZ00272 394 EMFDEVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKK 473
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  494 VANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDK 573
Cdd:PTZ00272 474 LETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGD 553
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  574 KVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKD 653
Cdd:PTZ00272 554 KVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKD 633
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 40556608  654 LVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEvtaEEPSAAVPDEIPPLEGDEDASRMEEVD 724
Cdd:PTZ00272 634 LVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEE---EEAAEAPVAETAPAEVTAGTSSMEQVD 701
 
Name Accession Description Interval E-value
PTZ00272 PTZ00272
heat shock protein 83 kDa (Hsp83); Provisional
14-724 0e+00

heat shock protein 83 kDa (Hsp83); Provisional


Pssm-ID: 240341  Cd Length: 701  Bit Score: 940.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:PTZ00272   4 TFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   94 TKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 173
Cdd:PTZ00272  84 TKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPES 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  174 PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKedeekPKIEDV 253
Cdd:PTZ00272 164 DMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEE-----PKVEEV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  254 gsDEEDDSGKDKKKKTKKIKEKYIDQeelNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALL 333
Cdd:PTZ00272 239 --KEGDEGKKKKTKKVKEVTKEYEVQ---NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIM 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  334 FIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCL 413
Cdd:PTZ00272 314 FVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCL 393
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  414 ELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQ 493
Cdd:PTZ00272 394 EMFDEVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKK 473
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  494 VANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDK 573
Cdd:PTZ00272 474 LETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGD 553
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  574 KVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKD 653
Cdd:PTZ00272 554 KVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKD 633
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 40556608  654 LVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEvtaEEPSAAVPDEIPPLEGDEDASRMEEVD 724
Cdd:PTZ00272 634 LVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEE---EEAAEAPVAETAPAEVTAGTSSMEQVD 701
HSP90 pfam00183
Hsp90 protein;
191-712 0e+00

Hsp90 protein;


Pssm-ID: 459703  Cd Length: 516  Bit Score: 808.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   191 EYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKEdeekPKIEDVGSDEEDdsgkdkkKKTK 270
Cdd:pfam00183   1 EYLEEKKIKELVKKYSEFINFPIYLWVEKEEEVEVPDEEEEEEEEEEEEEDDD----PKVEEEDEEEEK-------KKTK 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKK 350
Cdd:pfam00183  70 KVKETVWEWELLNKTKPIWTRNPKEVTEEEYAEFYKSLSKDWEDPLAVKHFSVEGEVEFKSLLFIPKRAPFDLFENKKKK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   351 NNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFY 430
Cdd:pfam00183 150 NNIKLYVRRVFITDDFEDLIPEYLNFVKGVVDSDDLPLNVSRETLQQNKILKVIKKKLVRKALDMFKEIAEEKEDYKKFW 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   431 EAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEV 510
Cdd:pfam00183 230 KEFGKNLKLGIIEDSSNRNKLAKLLRFYSSKSGDELTSLDDYVSRMKEGQKHIYYITGESKEEVENSPFLERLKKKGYEV 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   511 VYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCC 590
Cdd:pfam00183 310 LYLTDPIDEYAVQQLKEFDGKKLVNVAKEGLELEEDEEEKKKDEELKKEFEPLTKWLKDVLGDKVEKVVVSNRLVDSPCV 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   591 IVTSTYGWTANMERIMKAQALR-DNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFS 669
Cdd:pfam00183 390 LVTSQYGWSANMERIMKAQALRkDSSMSSYMSSKKTLEINPRHPIIKELLKRVEADKDDKTAKDLALLLYETALLRSGFS 469
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 40556608   670 LEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP----SAAVPDEIPPLE 712
Cdd:pfam00183 470 LEDPASFASRIYRMLKLGLGIDEDEIVEEEDeieeEEEEEEEEPEEE 516
HtpG COG0326
Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, ...
14-689 0e+00

Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440095 [Multi-domain]  Cd Length: 616  Bit Score: 729.23  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:COG0326   5 TGEFQAEVKQLLDLMIHSLYSNKEIFLRELISNASDAIDKLRFLALTDPELKEEDGDLKIRIEVDKEAKTLTISDNGIGM 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  94 TKADLINNLGTIAKSGTKAFMEALQ--AGADISMIGQFGVGFYSAYLVAEKVVVITKH--NDDEQYAWESSAGGSFTVRA 169
Cdd:COG0326  85 TREEVIENLGTIAKSGTREFLEKLKgdQKKDSDLIGQFGVGFYSAFMVADKVEVVTRSagEDAEAVRWESDGDGEYTIEE 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 170 dhGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPItlYLEKEREKEISDdeaeeekgekeeedkedeekpk 249
Cdd:COG0326 165 --AEKAERGTEITLHLKEDAEEFLEEWRLREIIKKYSDFIPVPI--KMEGEEEETEED---------------------- 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 250 iedvgsdeeddsgkdkkkktkkikekyidqEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEF 329
Cdd:COG0326 219 ------------------------------ETINSATALWTRSKSEITDEEYKEFYKHLFHDFEDPLFWIHLNVEGPFEY 268
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 330 RALLFIPRRAPFDLFENKKKKNNIkLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIV 409
Cdd:COG0326 269 TGLLYIPKKAPFDLYDRDRKGGIK-LYVKRVFIMDDAEDLLPEYLRFVRGVVDSPDLPLNVSREILQEDRQLKKIRKAIT 347
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 410 KKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSqSGDEMTSLSEYVSRMKETQKSIYYITG 488
Cdd:COG0326 348 KKVLDELEKLAKnDREKYEKFWKEFGLVLKEGALEDFKNREKIADLLRFEST-KEGGYVTLAEYVERMKEGQKKIYYITG 426
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 489 ESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKeGLELPEDEEEKKKMEESKAKFENLCKLMK 568
Cdd:COG0326 427 ESREAAEQSPHLEIFKAKGIEVLLLTDPIDEFLISHLEEFDGKKFKSVDS-GDLDLDKLEEKKESEEEEEEFKPLLERFK 505
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 569 EILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAqalrdnstMGYMM--AKKHLEINPDHPIVETLRqkaeADK 646
Cdd:COG0326 506 EALGDKVKDVRVSARLTDSPACLVADEGDMSRRMEKMLKA--------MGQDMpeAKPILEINPNHPLVKKLA----AEE 573
                       650       660       670       680
                ....*....|....*....|....*....|....*....|...
gi 40556608 647 NDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689
Cdd:COG0326 574 DEELFKDLAELLYDQALLAEGGLLEDPAAFVKRLNKLLEKALG 616
HATPase_Hsp90-like cd16927
Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including ...
23-209 1.53e-110

Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including Escherichia coli HtpG, and related domains; This family includes the histidine kinase-like ATPase (HATPase) domains of 90 kilodalton heat-shock protein (Hsp90) eukaryotic homologs including cytosolic Hsp90, mitochondrial TRAP1 (tumor necrosis factor receptor-associated protein 1), GRP94 (94 kDa glucose-regulated protein) of the endoplasmic reticulum (ER), and chloroplast Hsp90C. It also includes the bacterial homologs of Hsp90, known as HtpG (High temperature protein G). Hsp90 family of chaperones assist other proteins to fold correctly, stabilizes them against heat stress, and aids in protein degradation.


Pssm-ID: 340404 [Multi-domain]  Cd Length: 189  Bit Score: 332.56  E-value: 1.53e-110
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  23 QLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNL 102
Cdd:cd16927   2 QLLDLIIHSLYSNKEIFLRELISNASDALDKLRYLSLTDPSLLDDDPELEIRISPDKENRTLTISDTGIGMTKEELINNL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 103 GTIAKSGTKAFMEALQAGA-DISMIGQFGVGFYSAYLVAEKVVVITKHN-DDEQYAWESSAGGSFTVRADHGEPiGRGTK 180
Cdd:cd16927  82 GTIARSGTKAFLEALQEGAkDSDLIGQFGVGFYSAFMVADKVTVTTKSAgDDEGYRWESDGGGSYTIEEAEGEL-GRGTK 160
                       170       180
                ....*....|....*....|....*....
gi 40556608 181 VILHLKEDQTEYLEERRVKEVVKKHSQFI 209
Cdd:cd16927 161 ITLHLKEDAKEFLEEARIKELVKKYSDFI 189
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
35-186 2.77e-10

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 58.04  E-value: 2.77e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608     35 NKEIFLRELISNASDALDKIRYEsltdpskldsGKELKIDIIPNPQERTLTLVDTGIGMTKADLinnlgtiaksgTKAFM 114
Cdd:smart00387   1 GDPDRLRQVLSNLLDNAIKYTPE----------GGRITVTLERDGDHVEITVEDNGPGIPPEDL-----------EKIFE 59
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 40556608    115 EALQAGADISMIGQFGVGFYSAYLVAEKVvvitkhnddeqyawessaGGSFTVRadhGEPiGRGTKVILHLK 186
Cdd:smart00387  60 PFFRTDKRSRKIGGTGLGLSIVKKLVELH------------------GGEISVE---SEP-GGGTTFTITLP 109
 
Name Accession Description Interval E-value
PTZ00272 PTZ00272
heat shock protein 83 kDa (Hsp83); Provisional
14-724 0e+00

heat shock protein 83 kDa (Hsp83); Provisional


Pssm-ID: 240341  Cd Length: 701  Bit Score: 940.26  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:PTZ00272   4 TFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNGIGM 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   94 TKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGE 173
Cdd:PTZ00272  84 TKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPES 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  174 PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKedeekPKIEDV 253
Cdd:PTZ00272 164 DMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEE-----PKVEEV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  254 gsDEEDDSGKDKKKKTKKIKEKYIDQeelNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALL 333
Cdd:PTZ00272 239 --KEGDEGKKKKTKKVKEVTKEYEVQ---NKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIM 313
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  334 FIPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCL 413
Cdd:PTZ00272 314 FVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCL 393
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  414 ELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQ 493
Cdd:PTZ00272 394 EMFDEVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKK 473
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  494 VANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDK 573
Cdd:PTZ00272 474 LETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGD 553
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  574 KVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKD 653
Cdd:PTZ00272 554 KVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKD 633
                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 40556608  654 LVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEvtaEEPSAAVPDEIPPLEGDEDASRMEEVD 724
Cdd:PTZ00272 634 LVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEE---EEAAEAPVAETAPAEVTAGTSSMEQVD 701
HSP90 pfam00183
Hsp90 protein;
191-712 0e+00

Hsp90 protein;


Pssm-ID: 459703  Cd Length: 516  Bit Score: 808.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   191 EYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKEdeekPKIEDVGSDEEDdsgkdkkKKTK 270
Cdd:pfam00183   1 EYLEEKKIKELVKKYSEFINFPIYLWVEKEEEVEVPDEEEEEEEEEEEEEDDD----PKVEEEDEEEEK-------KKTK 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFENKKKK 350
Cdd:pfam00183  70 KVKETVWEWELLNKTKPIWTRNPKEVTEEEYAEFYKSLSKDWEDPLAVKHFSVEGEVEFKSLLFIPKRAPFDLFENKKKK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   351 NNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELAEDKENYKKFY 430
Cdd:pfam00183 150 NNIKLYVRRVFITDDFEDLIPEYLNFVKGVVDSDDLPLNVSRETLQQNKILKVIKKKLVRKALDMFKEIAEEKEDYKKFW 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   431 EAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEV 510
Cdd:pfam00183 230 KEFGKNLKLGIIEDSSNRNKLAKLLRFYSSKSGDELTSLDDYVSRMKEGQKHIYYITGESKEEVENSPFLERLKKKGYEV 309
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   511 VYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCC 590
Cdd:pfam00183 310 LYLTDPIDEYAVQQLKEFDGKKLVNVAKEGLELEEDEEEKKKDEELKKEFEPLTKWLKDVLGDKVEKVVVSNRLVDSPCV 389
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   591 IVTSTYGWTANMERIMKAQALR-DNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFS 669
Cdd:pfam00183 390 LVTSQYGWSANMERIMKAQALRkDSSMSSYMSSKKTLEINPRHPIIKELLKRVEADKDDKTAKDLALLLYETALLRSGFS 469
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 40556608   670 LEDPQTHSNRIYRMIKLGLGIDEDEVTAEEP----SAAVPDEIPPLE 712
Cdd:pfam00183 470 LEDPASFASRIYRMLKLGLGIDEDEIVEEEDeieeEEEEEEEEPEEE 516
PRK05218 PRK05218
heat shock protein 90; Provisional
14-689 0e+00

heat shock protein 90; Provisional


Pssm-ID: 235366 [Multi-domain]  Cd Length: 613  Bit Score: 746.94  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:PRK05218   5 TGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGDLKIRISFDKEARTLTISDNGIGM 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   94 TKADLINNLGTIAKSGTKAFMEALQ--AGADISMIGQFGVGFYSAYLVAEKVVVITKH--NDDEQYAWESSAGGSFTVra 169
Cdd:PRK05218  85 TREEVIENLGTIAKSGTKEFLEKLKgdQKKDSQLIGQFGVGFYSAFMVADKVTVITRSagPAAEAVRWESDGEGEYTI-- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  170 dhgEPI---GRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPItlYLEKEREkeisddeaeeekgekeeedkedee 246
Cdd:PRK05218 163 ---EEIekeERGTEITLHLKEDEDEFLDEWRIRSIIKKYSDFIPVPI--KLEKEEE------------------------ 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  247 kpkiedvgsdeeddsgkdkkkktkkikekyidqEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQ 326
Cdd:PRK05218 214 ---------------------------------ETINSASALWTRSKSEITDEEYKEFYKHLAHDFDDPLFWIHNNVEGP 260
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  327 LEFRALLFIPRRAPFDLFENKKKKNNIkLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRK 406
Cdd:PRK05218 261 FEYTGLLYIPKKAPFDLFNRDRKGGLK-LYVKRVFIMDDAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRK 339
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  407 NIVKKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGdEMTSLSEYVSRMKETQKSIYY 485
Cdd:PRK05218 340 AITKKVLDELEKLAKnDREKYEKFWKEFGPVLKEGLYEDFANREKLAKLLRFASTHEG-KYVSLAEYVERMKEGQKKIYY 418
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  486 ITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLE-LPEDEEEKKKMEESKAKFENLC 564
Cdd:PRK05218 419 ITGDSREAAKNSPHLELFKKKGIEVLLLTDPIDEFWISYLEEFDGKPFKSVARGDLDlGKEDEEEKEEKEEAEEEFKPLL 498
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  565 KLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQAlrdnstMGYMMAKKHLEINPDHPIVETLRQkaea 644
Cdd:PRK05218 499 ERLKEALGDKVKDVRLSHRLTDSPACLVADEGDMSTQMEKLLKAAG------QEVPESKPILEINPNHPLVKKLAD---- 568
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*
gi 40556608  645 DKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689
Cdd:PRK05218 569 EADEAKFKDLAELLYDQALLAEGGSLEDPAAFVKRLNELLLKLLA 613
HtpG COG0326
Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, ...
14-689 0e+00

Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440095 [Multi-domain]  Cd Length: 616  Bit Score: 729.23  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  14 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGM 93
Cdd:COG0326   5 TGEFQAEVKQLLDLMIHSLYSNKEIFLRELISNASDAIDKLRFLALTDPELKEEDGDLKIRIEVDKEAKTLTISDNGIGM 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  94 TKADLINNLGTIAKSGTKAFMEALQ--AGADISMIGQFGVGFYSAYLVAEKVVVITKH--NDDEQYAWESSAGGSFTVRA 169
Cdd:COG0326  85 TREEVIENLGTIAKSGTREFLEKLKgdQKKDSDLIGQFGVGFYSAFMVADKVEVVTRSagEDAEAVRWESDGDGEYTIEE 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 170 dhGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPItlYLEKEREKEISDdeaeeekgekeeedkedeekpk 249
Cdd:COG0326 165 --AEKAERGTEITLHLKEDAEEFLEEWRLREIIKKYSDFIPVPI--KMEGEEEETEED---------------------- 218
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 250 iedvgsdeeddsgkdkkkktkkikekyidqEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEF 329
Cdd:COG0326 219 ------------------------------ETINSATALWTRSKSEITDEEYKEFYKHLFHDFEDPLFWIHLNVEGPFEY 268
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 330 RALLFIPRRAPFDLFENKKKKNNIkLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIV 409
Cdd:COG0326 269 TGLLYIPKKAPFDLYDRDRKGGIK-LYVKRVFIMDDAEDLLPEYLRFVRGVVDSPDLPLNVSREILQEDRQLKKIRKAIT 347
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 410 KKCLELFSELAE-DKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSqSGDEMTSLSEYVSRMKETQKSIYYITG 488
Cdd:COG0326 348 KKVLDELEKLAKnDREKYEKFWKEFGLVLKEGALEDFKNREKIADLLRFEST-KEGGYVTLAEYVERMKEGQKKIYYITG 426
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 489 ESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKeGLELPEDEEEKKKMEESKAKFENLCKLMK 568
Cdd:COG0326 427 ESREAAEQSPHLEIFKAKGIEVLLLTDPIDEFLISHLEEFDGKKFKSVDS-GDLDLDKLEEKKESEEEEEEFKPLLERFK 505
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 569 EILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAqalrdnstMGYMM--AKKHLEINPDHPIVETLRqkaeADK 646
Cdd:COG0326 506 EALGDKVKDVRVSARLTDSPACLVADEGDMSRRMEKMLKA--------MGQDMpeAKPILEINPNHPLVKKLA----AEE 573
                       650       660       670       680
                ....*....|....*....|....*....|....*....|...
gi 40556608 647 NDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLG 689
Cdd:COG0326 574 DEELFKDLAELLYDQALLAEGGLLEDPAAFVKRLNKLLEKALG 616
PTZ00130 PTZ00130
heat shock protein 90; Provisional
17-722 4.81e-167

heat shock protein 90; Provisional


Pssm-ID: 185466 [Multi-domain]  Cd Length: 814  Bit Score: 500.72  E-value: 4.81e-167
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   17 FQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKA 96
Cdd:PTZ00130  70 YQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANKEKNILSITDTGIGMTKE 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   97 DLINNLGTIAKSGTKAFMEAL-QAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEP 174
Cdd:PTZ00130 150 DLINNLGTIAKSGTSNFLEAIsKSGGDMSLIGQFGVGFYSAFLVADKVIVYTKNNNDEQYIWESTADAKFTIYKDpRGST 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  175 IGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEKEREKEIsddeaeeekgeKEEEDKEDEEKPKIEDVG 254
Cdd:PTZ00130 230 LKRGTRISLHLKEDATNLMNDKKLVDLISKYSQFIQYPIYLLHENVYTEEV-----------LADIAKEMENDPNYDSVK 298
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  255 SDEEDDSGKDKKKKTKKIKEKYIdqeeLNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLF 334
Cdd:PTZ00130 299 VEETDDPNKKTRTVEKKVKKWKL----MNEQKPIWLRPPKELTDEDYKKFFSVLSGFNDEPLYHIHFFAEGEIEFKCLIY 374
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  335 IPRRAPFDLFENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLE 414
Cdd:PTZ00130 375 IPSRAPSINDHLFTKQNSIKLYVRRVLVADEFVEFLPRYMSFVKGVVDSDDLPLNVSREQLQQNKILKAVSKRIVRKILD 454
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  415 LFSEL-AEDKEN-----------------------------YKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGD 464
Cdd:PTZ00130 455 TFRTLyKEGKKNketlraelaketdeekkkeiqkkinepstYKLIYKEYRKYLKTGCYEDDINRNKIVKLLLFKTMLHPK 534
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  465 EMtSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELP 544
Cdd:PTZ00130 535 SI-SLDTYIENMKPDQKFIYYASGDSYEYLSKIPQLQIFKKKNIDVVFLTESVDESCVQRVQEYDGKKFKSIQKGEITFE 613
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  545 EDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQaLRDNSTMGYMMAKK 624
Cdd:PTZ00130 614 LTEDEKKKEEKVKKMYKALIDVISDTLRNQIFKVEISRRLVDAPCAVVSTEWGLSGQMEKLMKIN-VNNSDQIKAMSGQK 692
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  625 HLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDED-EVTAEEPSAA 703
Cdd:PTZ00130 693 ILEINPDHPIMIDLLKRSVSNPKDSQLTESIKIIYQSAKLASGFDLEDTADLAQIVYDHINQKLGVDNNlKIDDLDPAIF 772
                        730
                 ....*....|....*....
gi 40556608  704 VPDEIPPlEGDEDASRMEE 722
Cdd:PTZ00130 773 ETKKIEQ-EDSPDGQKFHE 790
HATPase_Hsp90-like cd16927
Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including ...
23-209 1.53e-110

Histidine kinase-like ATPase domain of human cytosolic Hsp90 and its homologs including Escherichia coli HtpG, and related domains; This family includes the histidine kinase-like ATPase (HATPase) domains of 90 kilodalton heat-shock protein (Hsp90) eukaryotic homologs including cytosolic Hsp90, mitochondrial TRAP1 (tumor necrosis factor receptor-associated protein 1), GRP94 (94 kDa glucose-regulated protein) of the endoplasmic reticulum (ER), and chloroplast Hsp90C. It also includes the bacterial homologs of Hsp90, known as HtpG (High temperature protein G). Hsp90 family of chaperones assist other proteins to fold correctly, stabilizes them against heat stress, and aids in protein degradation.


Pssm-ID: 340404 [Multi-domain]  Cd Length: 189  Bit Score: 332.56  E-value: 1.53e-110
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  23 QLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKIDIIPNPQERTLTLVDTGIGMTKADLINNL 102
Cdd:cd16927   2 QLLDLIIHSLYSNKEIFLRELISNASDALDKLRYLSLTDPSLLDDDPELEIRISPDKENRTLTISDTGIGMTKEELINNL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608 103 GTIAKSGTKAFMEALQAGA-DISMIGQFGVGFYSAYLVAEKVVVITKHN-DDEQYAWESSAGGSFTVRADHGEPiGRGTK 180
Cdd:cd16927  82 GTIARSGTKAFLEALQEGAkDSDLIGQFGVGFYSAFMVADKVTVTTKSAgDDEGYRWESDGGGSYTIEEAEGEL-GRGTK 160
                       170       180
                ....*....|....*....|....*....
gi 40556608 181 VILHLKEDQTEYLEERRVKEVVKKHSQFI 209
Cdd:cd16927 161 ITLHLKEDAKEFLEEARIKELVKKYSDFI 189
PRK14083 PRK14083
HSP90 family protein; Provisional
16-408 3.80e-32

HSP90 family protein; Provisional


Pssm-ID: 237603 [Multi-domain]  Cd Length: 601  Bit Score: 132.37  E-value: 3.80e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   16 AFQAEIAQLMSLIINTFYSNKEIFLRELISNASDAldkIRYESLTDPSKldsgkELKIDIIP-NPQERTLTLVDTGIGMT 94
Cdd:PRK14083   4 RFQVDLRGVIDLLSRHLYSSPRVYVRELLQNAVDA---ITARRALDPTA-----PGRIRIELtDAGGGTLIVEDNGIGLT 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608   95 KADLINNLGTIAKSGTKAfmEALQAGADiSMIGQFGVGFYSAYLVAEKVVVITKHNDDEQ-YAWESSAGGSFTVRADHGE 173
Cdd:PRK14083  76 EEEVHEFLATIGRSSKRD--ENLGFARN-DFLGQFGIGLLSCFLVADEIVVVSRSAKDGPaVEWRGKADGTYSVRKLETE 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  174 PIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITlylekerekeisddeaeeekgekeeedkedeekpkIEDv 253
Cdd:PRK14083 153 RAEPGTTVYLRPRPDAEEWLERETVEELAKKYGSLLPVPIR-----------------------------------VEG- 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  254 gsdeeddsgkdkkkktkkikekyiDQEELNKTKPIWTRNPDDITQE-----EYGEfyKSLTNDWEDH--LAVKHFSVEGq 326
Cdd:PRK14083 197 ------------------------EKGGVNETPPPWTRDYPDPETRreallAYGE--ELLGFTPLDVipLDVPSGGLEG- 249
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608  327 lefrALLFIPRRAPFdlfenkKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRK 406
Cdd:PRK14083 250 ----VAYVLPYAVSP------AARRKHRVYLKRMLLSEEAENLLPDWAFFVRCVVNTDELRPTASREALYEDDALAAVRE 319

                 ..
gi 40556608  407 NI 408
Cdd:PRK14083 320 EL 321
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
35-186 2.77e-10

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 58.04  E-value: 2.77e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608     35 NKEIFLRELISNASDALDKIRYEsltdpskldsGKELKIDIIPNPQERTLTLVDTGIGMTKADLinnlgtiaksgTKAFM 114
Cdd:smart00387   1 GDPDRLRQVLSNLLDNAIKYTPE----------GGRITVTLERDGDHVEITVEDNGPGIPPEDL-----------EKIFE 59
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 40556608    115 EALQAGADISMIGQFGVGFYSAYLVAEKVvvitkhnddeqyawessaGGSFTVRadhGEPiGRGTKVILHLK 186
Cdd:smart00387  60 PFFRTDKRSRKIGGTGLGLSIVKKLVELH------------------GGEISVE---SEP-GGGTTFTITLP 109
HATPase_c_3 pfam13589
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents, additionally, ...
37-154 8.52e-07

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 433332 [Multi-domain]  Cd Length: 135  Bit Score: 48.87  E-value: 8.52e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608    37 EIFLRELISNASDAldkiryesltdpskldSGKELKIDIIPNPQERT-LTLVDTGIGMTKADLINNLGtIAKSGTKafme 115
Cdd:pfam13589   2 EGALAELIDNSIDA----------------DATNIKIEVNKNRGGGTeIVIEDDGHGMSPEELINALR-LATSAKE---- 60
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 40556608   116 alqAGADISMIGQFGVGFYSAYLV-AEKVVVITKHNDDEQ 154
Cdd:pfam13589  61 ---AKRGSTDLGRYGIGLKLASLSlGAKLTVTSKKEGKSS 97
HATPase_c pfam02518
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ...
35-189 2.30e-05

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 460579 [Multi-domain]  Cd Length: 109  Bit Score: 43.90  E-value: 2.30e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40556608    35 NKEIFLRELISNASDALDKIRYEsltdpskldsGKELKIDIIPnPQERTLTLVDTGIGMTKADLinnlgtiAKSGTKaFM 114
Cdd:pfam02518   1 GDELRLRQVLSNLLDNALKHAAK----------AGEITVTLSE-GGELTLTVEDNGIGIPPEDL-------PRIFEP-FS 61
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 40556608   115 EalqagADISMIGQFGVGFYSAYLVAEKVvvitkhnddeqyawessaGGSFTVRadhgEPIGRGTKVILHLKEDQ 189
Cdd:pfam02518  62 T-----ADKRGGGGTGLGLSIVRKLVELL------------------GGTITVE----SEPGGGTTVTLTLPLAQ 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH