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Conserved domains on  [gi|1395168499|ref|NP_001350940|]
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keratinocyte differentiation-associated protein isoform 4 precursor [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KRTDAP super family cl21065
Keratinocyte differentiation-associated;
23-88 1.42e-31

Keratinocyte differentiation-associated;


The actual alignment was detected with superfamily member pfam15200:

Pssm-ID: 464559  Cd Length: 77  Bit Score: 105.31  E-value: 1.42e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1395168499 23 AALGHPTiypEDSSYNNYPTATE--------------AFQSENFLNWHVITDMFKNAFPFINWDFFPKVKGLRSAAPDSQ 88
Cdd:pfam15200  1 AALGSPE---EETTIGNYALGSEglnnqflnidrlrsAFKSDEFLNWHALTDMIKKALPFLNWDAFPKVKGLRSAIPDAQ 77
 
Name Accession Description Interval E-value
KRTDAP pfam15200
Keratinocyte differentiation-associated;
23-88 1.42e-31

Keratinocyte differentiation-associated;


Pssm-ID: 464559  Cd Length: 77  Bit Score: 105.31  E-value: 1.42e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1395168499 23 AALGHPTiypEDSSYNNYPTATE--------------AFQSENFLNWHVITDMFKNAFPFINWDFFPKVKGLRSAAPDSQ 88
Cdd:pfam15200  1 AALGSPE---EETTIGNYALGSEglnnqflnidrlrsAFKSDEFLNWHALTDMIKKALPFLNWDAFPKVKGLRSAIPDAQ 77
 
Name Accession Description Interval E-value
KRTDAP pfam15200
Keratinocyte differentiation-associated;
23-88 1.42e-31

Keratinocyte differentiation-associated;


Pssm-ID: 464559  Cd Length: 77  Bit Score: 105.31  E-value: 1.42e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1395168499 23 AALGHPTiypEDSSYNNYPTATE--------------AFQSENFLNWHVITDMFKNAFPFINWDFFPKVKGLRSAAPDSQ 88
Cdd:pfam15200  1 AALGSPE---EETTIGNYALGSEglnnqflnidrlrsAFKSDEFLNWHALTDMIKKALPFLNWDAFPKVKGLRSAIPDAQ 77
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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