NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|893553075|ref|NP_001297620|]
View 

sulfate anion transporter 1 isoform 1 [Mus musculus]

Protein Classification

solute carrier family 26 protein( domain architecture ID 11489705)

solute carrier family 26 protein similar to eukaryotic sulfate transporters such as Arabidopsis thaliana sulfate transporter 1.1, which is a high-affinity H(+)/sulfate cotransporter that mediates the uptake of the environmental sulfate by plant roots under low-sulfur conditions

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
71-702 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


:

Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 603.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075   71 PAIHWLPQYRLKEyLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVG 150
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  151 QVVDRELQLAGFDpsqdslgpknndstlnnsattliiglqdcrrdcYAIRVATALTLMAGLYQVLMGILRLGFVSTYLSQ 230
Cdd:TIGR00815  80 SLVQREGLQGLFD---------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSH 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  231 PLLDGFAMGASVTILTSQAKHMLGVQI-PRHQGLGMVVHTWLSLLQNvgqaNICDVVTSALCLGVLLAAKELSDRYRHRL 309
Cdd:TIGR00815 127 AVLVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLL 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  310 KVPIPTELFVIVVATIVSHFGQlHTRFDSRVAGNIPTG--FVAPQVPDPKIMWRVALDAMSLALVGSAFSISLAEMFARS 387
Cdd:TIGR00815 203 WAPAPAPLLVVVLATLIVTIGL-HDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAM 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  388 HGYSVSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACII 467
Cdd:TIGR00815 282 TGYEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAII 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  468 VVSLRGaLRKVKDLPQLWRLSPADALVWVATAATCVLVSTEAGLLAGVFFSLLSLAGRTQRPRAALLARIGDSTFYEDAA 547
Cdd:TIGR00815 362 ISAAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIE 440
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  548 EFEGLLPPPEVRVFRFTGPLYYANKDFFLRSLYRLTGLdaghsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvpLA 627
Cdd:TIGR00815 441 QYPKAQTPPGILIFRVDGPLYFANAEDLKERLLKWLET----------------------------------------LE 480
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 893553075  628 FGFHTVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLGEEQGaenELLFPSVHSA 702
Cdd:TIGR00815 481 LDPQIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGE---EHFFPSVHDA 552
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
71-702 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 603.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075   71 PAIHWLPQYRLKEyLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVG 150
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  151 QVVDRELQLAGFDpsqdslgpknndstlnnsattliiglqdcrrdcYAIRVATALTLMAGLYQVLMGILRLGFVSTYLSQ 230
Cdd:TIGR00815  80 SLVQREGLQGLFD---------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSH 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  231 PLLDGFAMGASVTILTSQAKHMLGVQI-PRHQGLGMVVHTWLSLLQNvgqaNICDVVTSALCLGVLLAAKELSDRYRHRL 309
Cdd:TIGR00815 127 AVLVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLL 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  310 KVPIPTELFVIVVATIVSHFGQlHTRFDSRVAGNIPTG--FVAPQVPDPKIMWRVALDAMSLALVGSAFSISLAEMFARS 387
Cdd:TIGR00815 203 WAPAPAPLLVVVLATLIVTIGL-HDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAM 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  388 HGYSVSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACII 467
Cdd:TIGR00815 282 TGYEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAII 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  468 VVSLRGaLRKVKDLPQLWRLSPADALVWVATAATCVLVSTEAGLLAGVFFSLLSLAGRTQRPRAALLARIGDSTFYEDAA 547
Cdd:TIGR00815 362 ISAAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIE 440
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  548 EFEGLLPPPEVRVFRFTGPLYYANKDFFLRSLYRLTGLdaghsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvpLA 627
Cdd:TIGR00815 441 QYPKAQTPPGILIFRVDGPLYFANAEDLKERLLKWLET----------------------------------------LE 480
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 893553075  628 FGFHTVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLGEEQGaenELLFPSVHSA 702
Cdd:TIGR00815 481 LDPQIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGE---EHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
85-498 5.40e-132

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 395.08  E-value: 5.40e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075   85 LAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDRELQLagfdp 164
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  165 sqdslgpknndstlnnsattliiglqdcrRDCYAIRVATALTLMAGLYQVLMGILRLGFVSTYLSQPLLDGFAMGASVTI 244
Cdd:pfam00916  76 -----------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVI 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  245 LTSQAKHMLGvqIPRHQGLGMVVHTWLSLLQNVGQANICDVVTSALCLGVLLAAKELSDRYRHRLKVPIPTELFVIVVAT 324
Cdd:pfam00916 127 LLSQLKVLLG--LTNFSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLAT 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  325 IVSHFGQLHTRFDSRVAGNIPTGFVAPQVP--DPKIMWRVALDAMSLALVGSAFSISLAEMFARSHGYSVSANQELLAVG 402
Cdd:pfam00916 205 LVSAIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALG 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  403 CCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACIIVVSLRGaLRKVKDLP 482
Cdd:pfam00916 285 FANILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELK 363
                         410
                  ....*....|....*.
gi 893553075  483 QLWRLSPADALVWVAT 498
Cdd:pfam00916 364 HLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
82-711 3.29e-87

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 283.92  E-value: 3.29e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  82 KEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDrelqlag 161
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 162 fdpsqdSLGPknndstlnnsattliiglqdcrrdcyaIRVATALTLMAGLYQVLMGILRLGFVSTYLSQPLLDGFAMGAS 241
Cdd:COG0659   77 ------PLGS---------------------------LALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIA 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 242 VTILTSQAKHMLGVQIPRHQGLgmvvHTWLSLLQNVGQANICDVVTSALCLGVLLAAKelsdRYRHRlkvpIPTELFVIV 321
Cdd:COG0659  124 ILIILGQLPHLLGLPAPGGSFL----EKLAALLAALGEINPPTLALGLLTLAILLLLP----RLLKR----IPGPLVAVV 191
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 322 VATIVSHFGQLhtrfDSRVAGNIPTGFVAPQVPD--PKIMWRVALDAMSLALVGSAFSISLAEMFARSHGYSVSANQELL 399
Cdd:COG0659  192 LGTLLVWLLGL----DVATVGEIPSGLPSFSLPDfsLETLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELI 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 400 AVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACI-IVVSLRgaLRKV 478
Cdd:COG0659  268 AQGLANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAIlIVVGIG--LIDW 345
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 479 KDLPQLWRLSPADALVWVATAATCVLVSTEAGLLAGVFFSLLSLAGRTQRPRAALLARigDSTFYEDAAEFEGLLPPPEV 558
Cdd:COG0659  346 RSFRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVVLRV--PGTHFRNVERHPEAETGPGV 423
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 559 RVFRFTGPLYYANKDFFLRSLYRLtgldaghsatrkdqGPEVgvsnrslvdgkdlgsvssgaglvvplafgfHTVVIDCA 638
Cdd:COG0659  424 LVYRLDGPLFFGNAERLKERLDAL--------------APDP------------------------------RVVILDLS 459
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 893553075 639 PLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLgEEQGAENelLFPSVHSAVEAACARRE 711
Cdd:COG0659  460 AVPFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLL-DELGEER--VFPDLDEALEAAEERAE 529
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
554-686 5.97e-18

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 79.59  E-value: 5.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 554 PPPEVRVFRFTGPLYYANKDFFLRSLYRLTGLDAGhsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvplafgFHTV 633
Cdd:cd07042    6 EPPGVLIYRIDGPLFFGNAEYFKDRLLRLVDEDPP-----------------------------------------LKVV 44
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 893553075 634 VIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLGE 686
Cdd:cd07042   45 ILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDE 97
PRK11660 PRK11660
putative transporter; Provisional
75-430 1.91e-17

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 86.16  E-value: 1.91e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  75 WLPQYRLKEyLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRhVNV----GIFSLLCLMVG 150
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSR-FSVsgptAAFVVILYPVS 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 151 QvvdrELQLAGfdpsqdslgpknndstlnnsattLIIGlqdcrrdcyairvatalTLMAGLYQVLMGILRLGFVSTYLSQ 230
Cdd:PRK11660  98 Q----QFGLAG-----------------------LLVA-----------------TLMSGIILILMGLARLGRLIEYIPL 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 231 PLLDGFAMGASVTILTSQAKHMLGVQIPrhqglGMVVHTW---LSLLQNVGQANICDVVTSALCLGVLLaakelsdrYRH 307
Cdd:PRK11660 134 SVTLGFTSGIGIVIATLQIKDFFGLQMA-----HVPEHYLekvGALFQALPTINWGDALIGIVTLGVLI--------LWP 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 308 RLKVPIPTELFVIVVATIVS----HFGQ----LHTRFdSRVAGNIPTGFVAPQVPdPKIMW------------RVALDAM 367
Cdd:PRK11660 201 RLKIRLPGHLPALLAGTAVMgvlnLLGGhvatIGSRF-HYVLADGSQGNGIPPLL-PQFVLpwnlpgadgqpfTLSWDLI 278
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 893553075 368 SlALVGSAFSIS-------------LAEMFARSHgysvSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATG 430
Cdd:PRK11660 279 R-ALLPAAFSMAmlgaiesllcavvLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAG 349
 
Name Accession Description Interval E-value
sulP TIGR00815
high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with ...
71-702 0e+00

high affinity sulphate transporter 1; The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out). [Transport and binding proteins, Anions]


Pssm-ID: 273284 [Multi-domain]  Cd Length: 552  Bit Score: 603.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075   71 PAIHWLPQYRLKEyLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVG 150
Cdd:TIGR00815   1 PVLRWLRKYRLKK-FKGDLMAGLTVGILLIPQAIAYAKLAGLPPIYGLYTSFVPPIIYALFGSSRHIAIGPTASVSLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  151 QVVDRELQLAGFDpsqdslgpknndstlnnsattliiglqdcrrdcYAIRVATALTLMAGLYQVLMGILRLGFVSTYLSQ 230
Cdd:TIGR00815  80 SLVQREGLQGLFD---------------------------------DYIRLAFTATLLAGIFQVIMGLLRLGFLIEYLSH 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  231 PLLDGFAMGASVTILTSQAKHMLGVQI-PRHQGLGMVVHTWLSLLQNvgqaNICDVVTSALCLGVLLAAKELSDRYRHRL 309
Cdd:TIGR00815 127 AVLVGFTAGAAITIGLSQLKGLLGLSIfVKTDILGVVISTWASLHQN----NWCTLVIGLLFLLFLLATKELGKRNKKLL 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  310 KVPIPTELFVIVVATIVSHFGQlHTRFDSRVAGNIPTG--FVAPQVPDPKIMWRVALDAMSLALVGSAFSISLAEMFARS 387
Cdd:TIGR00815 203 WAPAPAPLLVVVLATLIVTIGL-HDSQGVSIVGHIPQGlsFFPPITFTWQHLPTLAPDAIAIAIVGLTESILTARVFAAM 281
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  388 HGYSVSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACII 467
Cdd:TIGR00815 282 TGYEIDANKELVALGIANIVGSFFSCYPATGSLSRTAVNYKAGCKTQLSAIVMAIVVLLVLLVLAPLFYYIPLAALAAII 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  468 VVSLRGaLRKVKDLPQLWRLSPADALVWVATAATCVLVSTEAGLLAGVFFSLLSLAGRTQRPRAALLARIGDSTFYEDAA 547
Cdd:TIGR00815 362 ISAAVG-LIDIRELYLLWKADKMDFVVWLGTFLGVVFTSIEIGLLVGVSLSAFFFILRVARPRAAVLGRIPGTEDYENIE 440
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  548 EFEGLLPPPEVRVFRFTGPLYYANKDFFLRSLYRLTGLdaghsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvpLA 627
Cdd:TIGR00815 441 QYPKAQTPPGILIFRVDGPLYFANAEDLKERLLKWLET----------------------------------------LE 480
                         570       580       590       600       610       620       630
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 893553075  628 FGFHTVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLGEEQGaenELLFPSVHSA 702
Cdd:TIGR00815 481 LDPQIIILDMSAVPFLDTSGIHALEELFKELKARGIQLLLANPNPAVISTLARAGFVELIGE---EHFFPSVHDA 552
Sulfate_transp pfam00916
Sulfate permease family; This family of integral membrane proteins are known as the Sulfate ...
85-498 5.40e-132

Sulfate permease family; This family of integral membrane proteins are known as the Sulfate Permease (SulP) family. SulP is a large family found in all domains of life. Although sulfate is a commonly transported ion there are many other activities in this family. See the TCDB description for a comprehensive summary.


Pssm-ID: 459995 [Multi-domain]  Cd Length: 379  Bit Score: 395.08  E-value: 5.40e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075   85 LAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDRELQLagfdp 164
Cdd:pfam00916   1 LKGDLIAGITVAILAIPQALAYAILAGLPPIYGLYSSFVPGFVYALFGTSRHLAIGPVAVLSLMVGAAIAKLAAK----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  165 sqdslgpknndstlnnsattliiglqdcrRDCYAIRVATALTLMAGLYQVLMGILRLGFVSTYLSQPLLDGFAMGASVTI 244
Cdd:pfam00916  76 -----------------------------DPELGIALAFTLTFLAGIIQLALGLLRLGFLVTFLSHAVISGFMGGAAIVI 126
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  245 LTSQAKHMLGvqIPRHQGLGMVVHTWLSLLQNVGQANICDVVTSALCLGVLLAAKELSDRYRHRLKVPIPTELFVIVVAT 324
Cdd:pfam00916 127 LLSQLKVLLG--LTNFSGPGYVVSVLQSLFTNLDKVNLATLVLGLLVLVILLFTKELGKKYKKLFWIPAPAPLVAVVLAT 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  325 IVSHFGQLHTRFDSRVAGNIPTGFVAPQVP--DPKIMWRVALDAMSLALVGSAFSISLAEMFARSHGYSVSANQELLAVG 402
Cdd:pfam00916 205 LVSAIFDLLRRYGVKIVGEIPSGLPPFSLPkfSWSLLSALLPDALAIAIVGLLEAIAISKSFAKKKGYEVDSNQELVALG 284
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  403 CCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACIIVVSLRGaLRKVKDLP 482
Cdd:pfam00916 285 FANILSGLFGGYPATGAFSRSAVNIKAGAKTPLSGIIMAVIVLLVLLFLTPLFAYIPKAVLAAIIIVAGKG-LIDYRELK 363
                         410
                  ....*....|....*.
gi 893553075  483 QLWRLSPADALVWVAT 498
Cdd:pfam00916 364 HLWRLSKLDFLIWLAT 379
SUL1 COG0659
Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and ...
82-711 3.29e-87

Sulfate permease or related transporter, MFS superfamily [Inorganic ion transport and metabolism];


Pssm-ID: 440424 [Multi-domain]  Cd Length: 529  Bit Score: 283.92  E-value: 3.29e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  82 KEYLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRHVNVGIFSLLCLMVGQVVDrelqlag 161
Cdd:COG0659    4 RSNLRGDLLAGLTVALVALPLALAFAIAAGLPPEAGLYAAIVGGIVYALFGGSRLLISGPTAALAVVVAAAVA------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 162 fdpsqdSLGPknndstlnnsattliiglqdcrrdcyaIRVATALTLMAGLYQVLMGILRLGFVSTYLSQPLLDGFAMGAS 241
Cdd:COG0659   77 ------PLGS---------------------------LALLLAATLLAGVLQLLLGLLRLGRLARFIPRPVIVGFLAGIA 123
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 242 VTILTSQAKHMLGVQIPRHQGLgmvvHTWLSLLQNVGQANICDVVTSALCLGVLLAAKelsdRYRHRlkvpIPTELFVIV 321
Cdd:COG0659  124 ILIILGQLPHLLGLPAPGGSFL----EKLAALLAALGEINPPTLALGLLTLAILLLLP----RLLKR----IPGPLVAVV 191
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 322 VATIVSHFGQLhtrfDSRVAGNIPTGFVAPQVPD--PKIMWRVALDAMSLALVGSAFSISLAEMFARSHGYSVSANQELL 399
Cdd:COG0659  192 LGTLLVWLLGL----DVATVGEIPSGLPSFSLPDfsLETLRALLPPALTIALVGSIESLLTARAVDAMTGTRSDPNRELI 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 400 AVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACI-IVVSLRgaLRKV 478
Cdd:COG0659  268 AQGLANIASGLFGGLPVTGSISRSAVNVKAGARTRLSGIVHALFLLLVLLFLAPLLAYIPLAALAAIlIVVGIG--LIDW 345
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 479 KDLPQLWRLSPADALVWVATAATCVLVSTEAGLLAGVFFSLLSLAGRTQRPRAALLARigDSTFYEDAAEFEGLLPPPEV 558
Cdd:COG0659  346 RSFRRLWRAPRSDFLVMLVTFLVTVFTDLLIGVLVGVLLSLLLFLRRVSRPHVVVLRV--PGTHFRNVERHPEAETGPGV 423
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 559 RVFRFTGPLYYANKDFFLRSLYRLtgldaghsatrkdqGPEVgvsnrslvdgkdlgsvssgaglvvplafgfHTVVIDCA 638
Cdd:COG0659  424 LVYRLDGPLFFGNAERLKERLDAL--------------APDP------------------------------RVVILDLS 459
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 893553075 639 PLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLgEEQGAENelLFPSVHSAVEAACARRE 711
Cdd:COG0659  460 AVPFIDATALEALEELAERLRARGITLELAGLKPPVRDLLERAGLL-DELGEER--VFPDLDEALEAAEERAE 529
STAS_SulP_like_sulfate_transporter cd07042
Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, ...
554-686 5.97e-18

Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function; The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 132913 [Multi-domain]  Cd Length: 107  Bit Score: 79.59  E-value: 5.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 554 PPPEVRVFRFTGPLYYANKDFFLRSLYRLTGLDAGhsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvplafgFHTV 633
Cdd:cd07042    6 EPPGVLIYRIDGPLFFGNAEYFKDRLLRLVDEDPP-----------------------------------------LKVV 44
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 893553075 634 VIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLGE 686
Cdd:cd07042   45 ILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGLNPQVRELLERAGLLDE 97
PRK11660 PRK11660
putative transporter; Provisional
75-430 1.91e-17

putative transporter; Provisional


Pssm-ID: 183265 [Multi-domain]  Cd Length: 568  Bit Score: 86.16  E-value: 1.91e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  75 WLPQYRLKEyLAGDVMSGLVIGIILVPQAIAYSLLAGLQPIYSLYTSFFANLIYFLMGTSRhVNV----GIFSLLCLMVG 150
Cdd:PRK11660  20 WKEKYTAAR-FTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSR-FSVsgptAAFVVILYPVS 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 151 QvvdrELQLAGfdpsqdslgpknndstlnnsattLIIGlqdcrrdcyairvatalTLMAGLYQVLMGILRLGFVSTYLSQ 230
Cdd:PRK11660  98 Q----QFGLAG-----------------------LLVA-----------------TLMSGIILILMGLARLGRLIEYIPL 133
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 231 PLLDGFAMGASVTILTSQAKHMLGVQIPrhqglGMVVHTW---LSLLQNVGQANICDVVTSALCLGVLLaakelsdrYRH 307
Cdd:PRK11660 134 SVTLGFTSGIGIVIATLQIKDFFGLQMA-----HVPEHYLekvGALFQALPTINWGDALIGIVTLGVLI--------LWP 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 308 RLKVPIPTELFVIVVATIVS----HFGQ----LHTRFdSRVAGNIPTGFVAPQVPdPKIMW------------RVALDAM 367
Cdd:PRK11660 201 RLKIRLPGHLPALLAGTAVMgvlnLLGGhvatIGSRF-HYVLADGSQGNGIPPLL-PQFVLpwnlpgadgqpfTLSWDLI 278
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 893553075 368 SlALVGSAFSIS-------------LAEMFARSHgysvSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATG 430
Cdd:PRK11660 279 R-ALLPAAFSMAmlgaiesllcavvLDGMTGTKH----SANSELVGQGLGNIVAPFFGGITATAAIARSAANVRAG 349
STAS pfam01740
STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is ...
556-702 1.51e-15

STAS domain; The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.


Pssm-ID: 426404 [Multi-domain]  Cd Length: 106  Bit Score: 73.03  E-value: 1.51e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075  556 PEVRVFRFTGPLYYANKDFFLRSLYRLTGLDaghsatrkdqgpevgvsnrslvdgkdlgsvssgaglvvplafGFHTVVI 635
Cdd:pfam01740   8 PGILILRLDGPLDFANAESLRERLLRALEEG------------------------------------------EIKHVVL 45
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 893553075  636 DCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGFLgeeqgaENELLFPSVHSA 702
Cdd:pfam01740  46 DLSAVPFIDSSGLGALEELYKELRRRGVELVLVGPSPEVARTLEKTGLD------DIIKIFPTVAEA 106
STAS cd06844
Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of ...
552-683 1.03e-10

Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors; The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.


Pssm-ID: 132911 [Multi-domain]  Cd Length: 100  Bit Score: 59.03  E-value: 1.03e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 893553075 552 LLPPPEVRVFRFTGPLYYANKDFFLRSLYRLTgldaghsatrkdqgpevgvSNRSLvdgkdlgsvssgaglvvplafgfH 631
Cdd:cd06844    3 LEKVDDYWVVRLEGELDHHSVEQFKEELLHNI-------------------TNVAG-----------------------K 40
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 893553075 632 TVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGF 683
Cdd:cd06844   41 TIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGISPAVRITLTESGL 92
SpoIIAA COG1366
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction ...
626-683 2.19e-04

Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms];


Pssm-ID: 440977 [Multi-domain]  Cd Length: 93  Bit Score: 40.61  E-value: 2.19e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 893553075 626 LAFGFHTVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGF 683
Cdd:COG1366   35 LETGARRVVLDLSGVTFIDSSGLGALLSLAKAARLLGGRLVLVGVSPAVARVLELTGL 92
STAS_anti-anti-sigma_factors cd07043
Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key ...
626-683 5.37e-04

Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation; Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.


Pssm-ID: 132914 [Multi-domain]  Cd Length: 99  Bit Score: 39.81  E-value: 5.37e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 893553075 626 LAFGFHTVVIDCAPLLFLDVAGMATLKDLRRDYRALDITLLLACCSPSVRDTLRKGGF 683
Cdd:cd07043   34 LAEGPRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVNVSPAVRRVLELTGL 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH