NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|584277082|ref|NP_001276859|]
View 

zinc finger protein 718 isoform b [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
KRAB super family cl42959
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


The actual alignment was detected with superfamily member smart00349:

Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 584277082     1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048  288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048  368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                        170
                 ....*....|....*....
gi 584277082 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048  448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048  276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048  353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                        170
                 ....*....|
gi 584277082 433 NLPQHKRTHT 442
Cdd:COG5048  433 NLIPHKKIHT 442
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 584277082  153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
KRAB smart00349
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 584277082     1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048  288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048  368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                        170
                 ....*....|....*....
gi 584277082 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048  448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048  276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048  353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                        170
                 ....*....|
gi 584277082 433 NLPQHKRTHT 442
Cdd:COG5048  433 NLIPHKKIHT 442
zf-H2C2_2 pfam13465
Zinc-finger double domain;
405-430 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 584277082  405 HLNKHKKIHTVDKPYKCKECGKAFKQ 430
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
293-318 5.05e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.05e-04
                          10        20
                  ....*....|....*....|....*.
gi 584277082  293 DFAKHKRIHTGEKPYKCEECGKSFNR 318
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 584277082  153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
KRAB smart00349
krueppel associated box;
1-32 7.44e-11

krueppel associated box;


Pssm-ID: 214630 [Multi-domain]  Cd Length: 61  Bit Score: 57.60  E-value: 7.44e-11
                           10        20        30
                   ....*....|....*....|....*....|..
gi 584277082     1 MLENYRNLVSLGVSISNPDLVTSLEQRKEPYN 32
Cdd:smart00349  30 MLENYSNLVSLGFQVPKPDLISQLEQGEEPWI 61
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-354 2.27e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 2.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 193 KFYKCEECGKGFTRSSHLTKHKR--IHTGE--KPYIC--EKCGKAFNQSSTLNLHKRIHSAQKYYKCEEC-------GKA 259
Cdd:COG5048  288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLL 367

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 260 FKWSSSLNEHKRIHAGEKPFSCE--ECGNVFTTSSDFAKHKRIHTGEKPY--KCEECGKSFNRSTTLTTHKRIHTGEKPY 335
Cdd:COG5048  368 NNEPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                        170
                 ....*....|....*....
gi 584277082 336 TCEECGKAFNWSSTLNVHK 354
Cdd:COG5048  448 LCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
290-442 7.62e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 7.62e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 290 TSSDFAKHKRIHTgekPYKCEECGKSFNRSTTLTTHKR--IHTGE--KPYTCEE--CGKAFNWSSTLNVHKRIHSGKNPY 363
Cdd:COG5048  276 NESDSSSEKGFSL---PIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPA 352

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 364 KC--EDCGKAFKVFAN-----LHNHKKIHTGEKPYIC--KQCGKAFKQSSHLNKHKKIHTVDKPY--KCKECGKAFKQYS 432
Cdd:COG5048  353 KEklLNSSSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYncKNPPCSKSFNRHY 432

                        170
                 ....*....|
gi 584277082 433 NLPQHKRTHT 442
Cdd:COG5048  433 NLIPHKKIHT 442
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
136-443 5.10e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 48.54  E-value: 5.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 136 DKTFKCKECGKSFHVLSRLTQHKRIHTGENPYTCEECGKAFNWSSILTKHKRIHAREKFYKCEECGKGFTRSSHLTKHKR 215
Cdd:COG5048   31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSL 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 216 IHTGEKPYICEKC-GKAFNQSSTLNLHKRIHSAQKYYKCEECGKAFKWSSSLNEHKRIHAGEKPFSCEEcgnvFTTSSDF 294
Cdd:COG5048  111 SSSSSNSNDNNLLsSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPANSLSKD----PSSNLSL 186

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 295 AKHKRIHTGEKPYKCEECGKSFNRSTTLTTHKRIHTGEKPYTCEECGKAFNWSSTLNVHKRIHSGKNPYKCEDCGKAFKV 374
Cdd:COG5048  187 LISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSLP 266

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 375 FANLHNHKKIHTGE-------KPYICKQCGKAFKQSSHLNKHK--KIHT--VDKPYKCKE--CGKAFKQYSNLPQHKRTH 441
Cdd:COG5048  267 TASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSgeSLKPFSCPYslCGKLFSRNDALKRHILLH 346


                 ..
gi 584277082 442 TG 443
Cdd:COG5048  347 TS 348
zf-H2C2_2 pfam13465
Zinc-finger double domain;
405-430 2.35e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.35e-04
                          10        20
                  ....*....|....*....|....*.
gi 584277082  405 HLNKHKKIHTVDKPYKCKECGKAFKQ 430
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
293-318 5.05e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.05e-04
                          10        20
                  ....*....|....*....|....*.
gi 584277082  293 DFAKHKRIHTGEKPYKCEECGKSFNR 318
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
251-411 5.08e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 42.38  E-value: 5.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 251 YKCEECGKAFKWSSSLNEHKR--IHAGE--KPFSCEE--CGNVFTTSSDFAKHKRIHTGEKPYKCEEC-------GKSFN 317
Cdd:COG5048  290 IKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLLNN 369

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 318 RSTTLTTHKRIHTGEKPYTCE--ECGKAFNWSSTLNVHKRIHSGKNPYKCED--CGKAFKVFANLHNHKKIHTgEKPYIC 393
Cdd:COG5048  370 EPPQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPYNCKNppCSKSFNRHYNLIPHKKIHT-NHAPLL 448

                        170
                 ....*....|....*...
gi 584277082 394 KQCGKAFKQSSHLNKHKK 411
Cdd:COG5048  449 CSILKSFRRDLDLSNHGK 466
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 359-442 1.15e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 1.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 359 GKNPYKCE--DCGKAFKVFANLHNHKKiHtgekpyicKQCGKAFKQSSHLNKHKKIHTVDKPYKCKECGKAFKQYSNLPQ 436
Cdd:COG5189  346 DGKPYKCPveGCNKKYKNQNGLKYHML-H--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY 416


                 ....*.
gi 584277082 437 HkRTHT 442
Cdd:COG5189  417 H-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
322-345 1.83e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 1.83e-03
                          10        20
                  ....*....|....*....|....
gi 584277082  322 LTTHKRIHTGEKPYTCEECGKAFN 345
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 195-217 3.41e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 34.97  E-value: 3.41e-03
                          10        20
                  ....*....|....*....|...
gi 584277082  195 YKCEECGKGFTRSSHLTKHKRIH 217
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
153-177 3.74e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.74e-03
                          10        20
                  ....*....|....*....|....*
gi 584277082  153 RLTQHKRIHTGENPYTCEECGKAFN 177
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
139-298 3.90e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 3.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 139 FKCKECGKSFHVLSRLTQHKR--IHTGENPYTCEE----CGKAFNWSSILTKHKRIHAREKFYKC--EECGKGFTRSSH- 209
Cdd:COG5048  290 IKSKQCNISFSRSSPLTRHLRsvNHSGESLKPFSCpyslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLNn 369

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 210 ----LTKHKRIHTGEKPYICE--KCGKAFNQSSTLNLHKRIHSAQKY--YKCEECGKAFKWSSSLNEHKRIHAGEKPFSC 281
Cdd:COG5048  370 eppqSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLC 449

                        170
                 ....*....|....*..
gi 584277082 282 EECGNVFTTSSDFAKHK 298
Cdd:COG5048  450 SILKSFRRDLDLSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
209-234 5.49e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 5.49e-03
                          10        20
                  ....*....|....*....|....*.
gi 584277082  209 HLTKHKRIHTGEKPYICEKCGKAFNQ 234
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 248-326 6.37e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 6.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 584277082 248 QKYYKCE--ECGKAFKWSSSLNEHkRIHAgekpfsceECGNVFTTSSDFAKHKRIHTGEKPYKCEECGKSFNRSTTLTTH 325
Cdd:COG5189  347 GKPYKCPveGCNKKYKNQNGLKYH-MLHG--------HQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH 417


                 .
gi 584277082 326 K 326
Cdd:COG5189  418 R 418
zf-H2C2_2 pfam13465
Zinc-finger double domain;
350-373 9.06e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.50  E-value: 9.06e-03
                          10        20
                  ....*....|....*....|....
gi 584277082  350 LNVHKRIHSGKNPYKCEDCGKAFK 373
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH