protocadherin-9 isoform d precursor [Mus musculus]
protocadherin( domain architecture ID 10182726)
protocadherin may have tightly regulated functions in the development, regionalization, and functional differentiation of the central nervous system
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Protocadherin | pfam08374 | Protocadherin; The structure of protocadherins is similar to that of classic cadherins ... |
777-1000 | 9.53e-80 | ||||
Protocadherin; The structure of protocadherins is similar to that of classic cadherins (pfam00028), but particularly on the cytoplasmic domains they also have some unique features. They are expressed in a variety of organizms and are found in high concentrations in the brain where they seem to be localized mainly at cell-cell contact sites. Their expression seems to be developmentally regulated. : Pssm-ID: 462451 Cd Length: 217 Bit Score: 260.44 E-value: 9.53e-80
|
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
576-671 | 7.65e-33 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 122.42 E-value: 7.65e-33
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
258-354 | 2.38e-32 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 121.27 E-value: 2.38e-32
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
473-568 | 1.76e-30 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 115.87 E-value: 1.76e-30
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
146-248 | 4.79e-24 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 97.38 E-value: 4.79e-24
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
370-465 | 3.62e-18 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 80.82 E-value: 3.62e-18
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
687-776 | 3.39e-17 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 77.74 E-value: 3.39e-17
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
29-138 | 1.84e-07 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. : Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 50.39 E-value: 1.84e-07
|
||||||||
Name | Accession | Description | Interval | E-value | ||||
Protocadherin | pfam08374 | Protocadherin; The structure of protocadherins is similar to that of classic cadherins ... |
777-1000 | 9.53e-80 | ||||
Protocadherin; The structure of protocadherins is similar to that of classic cadherins (pfam00028), but particularly on the cytoplasmic domains they also have some unique features. They are expressed in a variety of organizms and are found in high concentrations in the brain where they seem to be localized mainly at cell-cell contact sites. Their expression seems to be developmentally regulated. Pssm-ID: 462451 Cd Length: 217 Bit Score: 260.44 E-value: 9.53e-80
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
576-671 | 7.65e-33 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 122.42 E-value: 7.65e-33
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
258-354 | 2.38e-32 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 121.27 E-value: 2.38e-32
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
473-568 | 1.76e-30 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 115.87 E-value: 1.76e-30
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
595-673 | 4.69e-25 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 99.73 E-value: 4.69e-25
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
146-248 | 4.79e-24 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 97.38 E-value: 4.79e-24
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
492-570 | 7.42e-24 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 96.26 E-value: 7.42e-24
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
258-349 | 4.84e-22 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 91.59 E-value: 4.84e-22
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
275-356 | 1.18e-21 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 90.10 E-value: 1.18e-21
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
577-665 | 2.53e-21 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 89.28 E-value: 2.53e-21
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
477-563 | 3.35e-18 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 80.42 E-value: 3.35e-18
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
370-465 | 3.62e-18 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 80.82 E-value: 3.62e-18
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
165-250 | 4.04e-18 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 80.09 E-value: 4.04e-18
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
687-776 | 3.39e-17 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 77.74 E-value: 3.39e-17
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
387-467 | 4.96e-15 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 71.23 E-value: 4.96e-15
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
147-242 | 7.36e-13 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 65.40 E-value: 7.36e-13
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
702-776 | 6.77e-10 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 56.59 E-value: 6.77e-10
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
687-761 | 3.07e-09 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 55.00 E-value: 3.07e-09
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
370-460 | 4.19e-08 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 51.92 E-value: 4.19e-08
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
29-138 | 1.84e-07 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 50.39 E-value: 1.84e-07
|
||||||||
Cadherin_2 | pfam08266 | Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. |
28-117 | 5.81e-07 | ||||
Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. Pssm-ID: 462413 Cd Length: 83 Bit Score: 48.29 E-value: 5.81e-07
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
56-140 | 1.70e-04 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 41.18 E-value: 1.70e-04
|
||||||||
Name | Accession | Description | Interval | E-value | ||||
Protocadherin | pfam08374 | Protocadherin; The structure of protocadherins is similar to that of classic cadherins ... |
777-1000 | 9.53e-80 | ||||
Protocadherin; The structure of protocadherins is similar to that of classic cadherins (pfam00028), but particularly on the cytoplasmic domains they also have some unique features. They are expressed in a variety of organizms and are found in high concentrations in the brain where they seem to be localized mainly at cell-cell contact sites. Their expression seems to be developmentally regulated. Pssm-ID: 462451 Cd Length: 217 Bit Score: 260.44 E-value: 9.53e-80
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
576-671 | 7.65e-33 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 122.42 E-value: 7.65e-33
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
258-354 | 2.38e-32 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 121.27 E-value: 2.38e-32
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
473-568 | 1.76e-30 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 115.87 E-value: 1.76e-30
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
595-673 | 4.69e-25 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 99.73 E-value: 4.69e-25
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
146-248 | 4.79e-24 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 97.38 E-value: 4.79e-24
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
492-570 | 7.42e-24 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 96.26 E-value: 7.42e-24
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
258-349 | 4.84e-22 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 91.59 E-value: 4.84e-22
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
275-356 | 1.18e-21 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 90.10 E-value: 1.18e-21
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
577-665 | 2.53e-21 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 89.28 E-value: 2.53e-21
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
477-563 | 3.35e-18 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 80.42 E-value: 3.35e-18
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
370-465 | 3.62e-18 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 80.82 E-value: 3.62e-18
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
165-250 | 4.04e-18 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 80.09 E-value: 4.04e-18
|
||||||||
Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
687-776 | 3.39e-17 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 77.74 E-value: 3.39e-17
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
387-467 | 4.96e-15 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 71.23 E-value: 4.96e-15
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
147-242 | 7.36e-13 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 65.40 E-value: 7.36e-13
|
||||||||
CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
702-776 | 6.77e-10 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 56.59 E-value: 6.77e-10
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
687-761 | 3.07e-09 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 55.00 E-value: 3.07e-09
|
||||||||
Cadherin | pfam00028 | Cadherin domain; |
370-460 | 4.19e-08 | ||||
Cadherin domain; Pssm-ID: 394985 [Multi-domain] Cd Length: 92 Bit Score: 51.92 E-value: 4.19e-08
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Cadherin_repeat | cd11304 | Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
29-138 | 1.84e-07 | ||||
Cadherin tandem repeat domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. Pssm-ID: 206637 [Multi-domain] Cd Length: 98 Bit Score: 50.39 E-value: 1.84e-07
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Cadherin_2 | pfam08266 | Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. |
28-117 | 5.81e-07 | ||||
Cadherin-like; This cadherin domain is usually the most N-terminal copy of the domain. Pssm-ID: 462413 Cd Length: 83 Bit Score: 48.29 E-value: 5.81e-07
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CA | smart00112 | Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. ... |
56-140 | 1.70e-04 | ||||
Cadherin repeats; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. Cadherin domains occur as repeats in the extracellular regions which are thought to mediate cell-cell contact when bound to calcium. Pssm-ID: 214520 [Multi-domain] Cd Length: 81 Bit Score: 41.18 E-value: 1.70e-04
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CA_like | cd00031 | Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
473-568 | 4.33e-04 | ||||
Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. This family also includes the cadherin-like repeats of extracellular alpha-dystroglycan. Pssm-ID: 206635 Cd Length: 98 Bit Score: 40.79 E-value: 4.33e-04
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CA_like | cd00031 | Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell ... |
261-354 | 3.84e-03 | ||||
Cadherin repeat-like domain; Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers. This family also includes the cadherin-like repeats of extracellular alpha-dystroglycan. Pssm-ID: 206635 Cd Length: 98 Bit Score: 38.09 E-value: 3.84e-03
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Blast search parameters | ||||
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