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Conserved domains on  [gi|314122229|ref|NP_001186625|]
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adhesion G protein-coupled receptor B2 isoform 2 precursor [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
868-1158 0e+00

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


:

Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 566.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFL 947
Cdd:cd15988     1 TGSPSVPLMIGCAVSCMALLILLAIYAAFWRFIRSERSIILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIV 1027
Cdd:cd15988    81 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTASYCWLSLEGGLLYAFVGPAAVIV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1028 LVNMLIGIIVFNKLMARDGVSDKSKKQRAGSERCPWASLLLPCSACGAVPSPLLSSASARNAMASLWSSCVVLPLLALTW 1107
Cdd:cd15988   161 LVNMLIGIIVFNKLMSRDGISDKSKKQRAGSEAEPCSSLLLKCSKCGVVSSAAMSSATASSAMASLWSSCVVLPLLALTW 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1108 MSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGV 1158
Cdd:cd15988   241 MSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVKCQMGG 291
AGRB_N pfam19188
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
26-221 1.41e-82

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


:

Pssm-ID: 465991  Cd Length: 177  Bit Score: 268.19  E-value: 1.41e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229    26 SACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCTHFAPRLLPLDHYLVNFTclrpgpeea 105
Cdd:pfam19188    1 DPCSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTT--------- 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   106 taraESEVGRPeeeeeeaaAAASGLELCGGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALAFRFVEVLLINNNNSS 185
Cdd:pfam19188   72 ----RTYLGRE--------SFDEVVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPS 139
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 314122229   186 QFTCGVLCRWSEECGRAA--GRACGFAQPGCSCPGEAG 221
Cdd:pfam19188  140 QFTCGVLCRWLEECLSAStsSRPCGIMQTPCICPGTVP 177
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
550-705 1.23e-35

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


:

Pssm-ID: 465137  Cd Length: 205  Bit Score: 135.09  E-value: 1.23e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   550 GMSQVVRSLQELLARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDSENKDKWDDAQQVSPGSVH 629
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   630 --LLRVVEDFIHLVGDALKAFQSSLIVTDNLVISIQRE--PISAVSSDITFPMRGRRGmkdwvrHSEDRLFLPKEVLSLS 705
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAFKPP 154
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
303-353 1.89e-15

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 71.85  E-value: 1.89e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    303 WEEWGSWSLCSRSCGRGSRSRMRTCV--PPQHGGKACEGPELQTKLCSMAACP 353
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
809-862 2.73e-14

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


:

Pssm-ID: 197639  Cd Length: 49  Bit Score: 68.18  E-value: 2.73e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 314122229    809 TDPHCASWDYSRadtnsGDWNTESCQTLETQAAHTRCQCQHLSTFAVLAQPPKD 862
Cdd:smart00303    1 FNPICVFWDESS-----GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPPI 49
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
414-464 4.02e-12

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 62.22  E-value: 4.02e-12
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    414 WGPWNAWSLCSKTCDTGWQRRFRMC--QASGTQGYPCEGTGEEVKPCSEKRCP 464
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCcsPPPQNGGGPCTGEDVETRACNEQPCP 53
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
358-408 5.10e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


:

Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 59.14  E-value: 5.10e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    358 WLEWGPWGPCSSSCANGTQQRSRKCSVAGPAW--ATCAGALTDTRECSNLDCP 408
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQNggGPCTGEDVETRACNEQPCP 53
HormR smart00008
Domain present in hormone receptors;
467-531 3.23e-09

Domain present in hormone receptors;


:

Pssm-ID: 214468  Cd Length: 70  Bit Score: 54.83  E-value: 3.23e-09
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314122229    467 HEMCRDEYVMLMTWKRAAAGEIIYNKCPPNASG-----SASRRCLLSAQgvayWGL--PSFARCISHEYRYL 531
Cdd:smart00008    2 DLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENGG----WSPpfPNYSNCTSNDYEEL 69
 
Name Accession Description Interval E-value
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
868-1158 0e+00

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 566.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFL 947
Cdd:cd15988     1 TGSPSVPLMIGCAVSCMALLILLAIYAAFWRFIRSERSIILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIV 1027
Cdd:cd15988    81 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTASYCWLSLEGGLLYAFVGPAAVIV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1028 LVNMLIGIIVFNKLMARDGVSDKSKKQRAGSERCPWASLLLPCSACGAVPSPLLSSASARNAMASLWSSCVVLPLLALTW 1107
Cdd:cd15988   161 LVNMLIGIIVFNKLMSRDGISDKSKKQRAGSEAEPCSSLLLKCSKCGVVSSAAMSSATASSAMASLWSSCVVLPLLALTW 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1108 MSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGV 1158
Cdd:cd15988   241 MSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVKCQMGG 291
AGRB_N pfam19188
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
26-221 1.41e-82

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


Pssm-ID: 465991  Cd Length: 177  Bit Score: 268.19  E-value: 1.41e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229    26 SACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCTHFAPRLLPLDHYLVNFTclrpgpeea 105
Cdd:pfam19188    1 DPCSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTT--------- 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   106 taraESEVGRPeeeeeeaaAAASGLELCGGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALAFRFVEVLLINNNNSS 185
Cdd:pfam19188   72 ----RTYLGRE--------SFDEVVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPS 139
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 314122229   186 QFTCGVLCRWSEECGRAA--GRACGFAQPGCSCPGEAG 221
Cdd:pfam19188  140 QFTCGVLCRWLEECLSAStsSRPCGIMQTPCICPGTVP 177
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
868-1137 4.24e-68

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 229.86  E-value: 4.24e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKG--------VCTMTA 939
Cdd:pfam00002    1 ALSLKVIYTVGYSLSLVALLLAIAIFLLF-RKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQdldhcswvGCKVVA 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   940 AFLHFFFLSSFCWVLTEAWQSYLA-VIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYA 1018
Cdd:pfam00002   80 VFLHYFFLANFFWMLVEGLYLYTLlVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVD-PKGYGEDDGCWLSNENGLWWI 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  1019 FVGPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKKQRagsercpwaslllpcsacgavpspllssasaRNAMASLWSSCV 1098
Cdd:pfam00002  159 IRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDL-------------------------------KQYRRLAKSTLL 207
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 314122229  1099 VLPLLALTWMSAVLAMTDRR--SVLFQALFAVFNSAQGFVI 1137
Cdd:pfam00002  208 LLPLLGITWVFGLFAFNPENtlRVVFLYLFLILNSFQGFFV 248
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
550-705 1.23e-35

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


Pssm-ID: 465137  Cd Length: 205  Bit Score: 135.09  E-value: 1.23e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   550 GMSQVVRSLQELLARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDSENKDKWDDAQQVSPGSVH 629
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   630 --LLRVVEDFIHLVGDALKAFQSSLIVTDNLVISIQRE--PISAVSSDITFPMRGRRGmkdwvrHSEDRLFLPKEVLSLS 705
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAFKPP 154
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
303-353 1.89e-15

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 71.85  E-value: 1.89e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    303 WEEWGSWSLCSRSCGRGSRSRMRTCV--PPQHGGKACEGPELQTKLCSMAACP 353
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
809-862 2.73e-14

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 68.18  E-value: 2.73e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 314122229    809 TDPHCASWDYSRadtnsGDWNTESCQTLETQAAHTRCQCQHLSTFAVLAQPPKD 862
Cdd:smart00303    1 FNPICVFWDESS-----GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPPI 49
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
811-856 9.48e-14

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 66.56  E-value: 9.48e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 314122229   811 PHCASWDYSraDTNSGDWNTESCQTLETQAAHTRCQCQHLSTFAVL 856
Cdd:pfam01825    1 PQCVFWDFT--NSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
414-464 4.02e-12

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 62.22  E-value: 4.02e-12
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    414 WGPWNAWSLCSKTCDTGWQRRFRMC--QASGTQGYPCEGTGEEVKPCSEKRCP 464
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCcsPPPQNGGGPCTGEDVETRACNEQPCP 53
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
305-352 6.01e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 61.91  E-value: 6.01e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 314122229   305 EWGSWSLCSRSCGRGSRSRMRT-CVPPQHGGKACeGPELQTKLCSMAAC 352
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
358-408 5.10e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 59.14  E-value: 5.10e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    358 WLEWGPWGPCSSSCANGTQQRSRKCSVAGPAW--ATCAGALTDTRECSNLDCP 408
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQNggGPCTGEDVETRACNEQPCP 53
HormR smart00008
Domain present in hormone receptors;
467-531 3.23e-09

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 54.83  E-value: 3.23e-09
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314122229    467 HEMCRDEYVMLMTWKRAAAGEIIYNKCPPNASG-----SASRRCLLSAQgvayWGL--PSFARCISHEYRYL 531
Cdd:smart00008    2 DLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENGG----WSPpfPNYSNCTSNDYEEL 69
TSP_1 pfam00090
Thrombospondin type 1 domain;
360-407 2.80e-08

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 51.26  E-value: 2.80e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 314122229   360 EWGPWGPCSSSCANGTQQRSRKCSVAGPAWATCAGALTDTRECSNLDC 407
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
TSP_1 pfam00090
Thrombospondin type 1 domain;
415-463 3.00e-08

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 51.26  E-value: 3.00e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 314122229   415 GPWNAWSLCSKTCDTGWQRRFRMCQASGTQGYPCEGTGEEVKPCSEKRC 463
Cdd:pfam00090    1 SPWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
301-355 1.76e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.11  E-value: 1.76e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229  301 GVWEEWgswSLCSRSCGRGSRSRMRtcvPPQHGGkaCEgPELQTKlCSMAACPVE 355
Cdd:PTZ00441  241 GPWDEW---TPCSVTCGKGTHSRSR---PILHEG--CT-THMVEE-CEEEECPVE 285
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
467-526 4.81e-04

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 39.66  E-value: 4.81e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 314122229   467 HEMCRDEYVMLMTWKRAAAGEIIYNKCPPNAS-----GSASRRCLLSAQgvayWGLPS---FARCISH 526
Cdd:pfam02793    1 GLGCPRTWDGILCWPRTPAGETVEVPCPDYFSgfdprGNASRNCTEDGT----WSEHPpsnYSNCTSN 64
 
Name Accession Description Interval E-value
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
868-1158 0e+00

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 566.12  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFL 947
Cdd:cd15988     1 TGSPSVPLMIGCAVSCMALLILLAIYAAFWRFIRSERSIILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIV 1027
Cdd:cd15988    81 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTASYCWLSLEGGLLYAFVGPAAVIV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1028 LVNMLIGIIVFNKLMARDGVSDKSKKQRAGSERCPWASLLLPCSACGAVPSPLLSSASARNAMASLWSSCVVLPLLALTW 1107
Cdd:cd15988   161 LVNMLIGIIVFNKLMSRDGISDKSKKQRAGSEAEPCSSLLLKCSKCGVVSSAAMSSATASSAMASLWSSCVVLPLLALTW 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1108 MSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGV 1158
Cdd:cd15988   241 MSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVKCQMGG 291
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
868-1158 3.33e-154

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 467.89  E-value: 3.33e-154
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFL 947
Cdd:cd15251     1 AGSPSVTLIVGCGVSCLALLTLLAIYAAFWRYIRSERSIILINFCLSIISSNILILVGQTQTLNKGVCTMTAAFLHFFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIV 1027
Cdd:cd15251    81 SSFCWVLTEAWQSYMAVTGRMRTRLIRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAAVV 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1028 LVNMLIGIIVFNKLMARDGVSDkskkqragsercpwaslllpcsacgavpspllssasarNAMASLWSSCVVLPLLALTW 1107
Cdd:cd15251   161 LVNMVIGILVFNKLVSRDGISD--------------------------------------NAMASLWSSCVVLPLLALTW 202
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1108 MSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGV 1158
Cdd:cd15251   203 MSAVLAMTDRRSVLFQILFAVFDSLQGFVIVMVHCILRREVQDAVKCRMGV 253
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
866-1156 6.69e-130

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 404.45  E-value: 6.69e-130
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  866 ELAGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFF 945
Cdd:cd15989     1 ESSGTPSVTLIVGCGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  946 FLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAV 1025
Cdd:cd15989    81 FLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVAISMGFTKAKGYGTPHYCWLSLEGGLLYAFVGPAAA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1026 IVLVNMLIGIIVFNKLMARDGVSDKSKKQRAGSERCPWASLLLPCSACGAVPSPLLSSASARNAMASLWSSCVVLPLLAL 1105
Cdd:cd15989   161 VVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLAL 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1106 TWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQM 1156
Cdd:cd15989   241 TWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 291
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
865-1163 5.50e-111

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 351.60  E-value: 5.50e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  865 LELAGAPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHF 944
Cdd:cd15990     1 MEKALLPSVTLIVGCGVSSLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  945 FFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAA 1024
Cdd:cd15990    81 FFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAISVGFTKAKGYGTVNYCWLSLEGGLLYAFVGPAA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1025 VIVLVNMLIGIIVFNKLMARDGVSDKSKKQRAGsercpwaslllpcsacgavpspllssasarnamASLWSSCVVLPLLA 1104
Cdd:cd15990   161 AVVLVNMVIGILVFNKLVSKDGITDKKLKERAG---------------------------------ASLWSSCVVLPLLA 207
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 314122229 1105 LTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMgVCRADE 1163
Cdd:cd15990   208 LTWMSAVLAITDRRSALFQILFAVFDSLEGFVIVMVHCILRREVQDAVKCRV-VDRQEE 265
AGRB_N pfam19188
Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion ...
26-221 1.41e-82

Adhesion GPCR B N-terminal region; This region is found at the N-terminus of various adhesion G-protein coupled receptor B proteins. This region contains 10 cysteine residues that probably form disulphide bonds.


Pssm-ID: 465991  Cd Length: 177  Bit Score: 268.19  E-value: 1.41e-82
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229    26 SACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCTHFAPRLLPLDHYLVNFTclrpgpeea 105
Cdd:pfam19188    1 DPCSTLVQGVLYGSFSLRDLFPTNASGCSWTLENPDPTKYTLYLKFTKPTQSCLPFSPRLLQFDHYLENTT--------- 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   106 taraESEVGRPeeeeeeaaAAASGLELCGGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALAFRFVEVLLINNNNSS 185
Cdd:pfam19188   72 ----RTYLGRE--------SFDEVVELCDASSPFSFLEFDKNFVQLCLLAEPRGDPESVVPGPSGDFKVEVLVINNENPS 139
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 314122229   186 QFTCGVLCRWSEECGRAA--GRACGFAQPGCSCPGEAG 221
Cdd:pfam19188  140 QFTCGVLCRWLEECLSAStsSRPCGIMQTPCICPGTVP 177
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
868-1137 4.24e-68

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 229.86  E-value: 4.24e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   868 AGAPSVPLVIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKG--------VCTMTA 939
Cdd:pfam00002    1 ALSLKVIYTVGYSLSLVALLLAIAIFLLF-RKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKQdldhcswvGCKVVA 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   940 AFLHFFFLSSFCWVLTEAWQSYLA-VIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYA 1018
Cdd:pfam00002   80 VFLHYFFLANFFWMLVEGLYLYTLlVEVFFSERKYFWWYLLIGWGVPALVVGIWAGVD-PKGYGEDDGCWLSNENGLWWI 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  1019 FVGPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKKQRagsercpwaslllpcsacgavpspllssasaRNAMASLWSSCV 1098
Cdd:pfam00002  159 IRGPILLIILVNFIIFINIVRILVQKLRETNMGKSDL-------------------------------KQYRRLAKSTLL 207
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 314122229  1099 VLPLLALTWMSAVLAMTDRR--SVLFQALFAVFNSAQGFVI 1137
Cdd:pfam00002  208 LLPLLGITWVFGLFAFNPENtlRVVFLYLFLILNSFQGFFV 248
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
877-1150 5.43e-67

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 226.69  E-value: 5.43e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15040    10 IGCGLSLLGLLLTIITYILFRKLRKRKPTKILLNLCLALLLANLLFLFGINSTDNPVLCTAVAALLHYFLLASFMWMLVE 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRT--RLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIG 1034
Cdd:cd15040    90 ALLLYLRLVKVFGTypRHFILKYALIGWGLPLIIVIITLAVDPDSYGNSSGYCWLSNGNGLYYAFLGPVLLIILVNLVIF 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1035 IIVFNKLMARDGVSDKSKKQragsercpwaslllpcsacgavpspllssasarNAMASLWSSCVVLPLLALTWMSAVLAM 1114
Cdd:cd15040   170 VLVLRKLLRLSAKRNKKKRK---------------------------------KTKAQLRAAVSLFFLLGLTWIFGILAI 216
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 314122229 1115 TDRRSVlFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15040   217 FGARVV-FQYLFAIFNSLQGFFIFIFHCLRNKEVRK 251
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
877-1150 5.18e-46

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 166.35  E-value: 5.18e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15933    10 IGCGISIACLALTLIIFL-VLRVLSSDRFQIHKNLCVALLLAQILLLAGEWAEGNKVACKVVAILLHFFFMAAFSWMLVE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFtRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGII 1036
Cdd:cd15933    89 GLHLYLMIVKVFNYKSKMRYYYFIGWGLPAIIVAISLAI-LFDDYGSPNVCWLSLDDGLIWAFVGPVIFIITVNTVILIL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1037 VFNKLMARDGVSDKSKKQRagsercpWASLllpcsacgavpspllsSASARnAMAslwsscVVLPLLALTWMSAVLAMTD 1116
Cdd:cd15933   168 VVKITVSLSTNDAKKSQGT-------LAQI----------------KSTAK-ASV------VLLPILGLTWLFGVLVVNS 217
                         250       260       270
                  ....*....|....*....|....*....|....
gi 314122229 1117 rRSVLFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15933   218 -QTIVFQYIFVILNSLQGLMIFLFHCVLNSEVRS 250
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
876-1149 5.57e-46

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 166.62  E-value: 5.57e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFWRFIKSeRSIILLNFCLSILASNILILVGQSRVLSKG--VCTMTAAFLHFFFLSSFCWV 953
Cdd:cd13952     9 YIGCSLSLVGLLLTIITYLLFPKLRNL-RGKILINLCLSLLLAQLLFLIGQLLTSSDRpvLCKALAILLHYFLLASFFWM 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  954 LTEAWQSYLAVIGRMRTRLvRKRFL---CLGWGLPALVVAVSVGFTRT----KGYGTSSYCWLSLEGGLLYAFVGPAAVI 1026
Cdd:cd13952    88 LVEAFDLYRTFVKVFGSSE-RRRFLkysLYGWGLPLLIVIITAIVDFSlygpSPGYGGEYCWLSNGNALLWAFYGPVLLI 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1027 VLVNMLIGIIVFNKLMArdgvsdKSKKQRAGSERcpwaslllpcsacgavpspllssasaRNAMASLWSSCVVLPLLALT 1106
Cdd:cd13952   167 LLVNLVFFILTVRILLR------KLRETPKQSER--------------------------KSDRKQLRAYLKLFPLMGLT 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 314122229 1107 WMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd13952   215 WIFGILAPFVGGSLVFWYLFDILNSLQGFFIFLIFCLKNKEVR 257
GAIN pfam16489
GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and ...
550-705 1.23e-35

GPCR-Autoproteolysis INducing (GAIN) domain; The GAIN a domain of alpha-helices and beta-strands that is found in cell-adhesion GPCRs and precedes the GPS motif where the autoproteolysis occurs, family, pfam01825. The full GAIN domain, comprises the GPS and the GAIN, in cell-adhesion GPCRs, and is the functional unit for autoproteolysis. The GPS motif at the end of the GAIN domain is an ancient domain that exists in primitive ancestor organizms, and the full GAIN + GPS is conserved in all cell-adhesion GPCRs and all PKD1-related proteins.


Pssm-ID: 465137  Cd Length: 205  Bit Score: 135.09  E-value: 1.23e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   550 GMSQVVRSLQELLARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDSENKDKWDDAQQVSPGSVH 629
Cdd:pfam16489    1 GAKELARELRNATRHGPLYGGDVLTAVELLSQLFDLLATQDATLSNAFLENFVQTVSNLLDPENRESWEDLQQTERGTAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229   630 --LLRVVEDFIHLVGDALKAFQSSLIVTDNLVISIQRE--PISAVSSDITFPMRGRRGmkdwvrHSEDRLFLPKEVLSLS 705
Cdd:pfam16489   81 tkLLRTLEEYALLLAQNMKYLTPFTIVTPNIVLSVDRLdtHNFKGARFPRFPMKGERP------KDEDSVKLPPKAFKPP 154
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
877-1149 4.02e-34

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 132.39  E-value: 4.02e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15440    10 IGCIISIVCLLLAFITFTCF-RNLQCDRNTIHKNLCLCLLIAEIVFLLGIDQTENRTLCGVIAGLLHYFFLAAFSWMLLE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYL---AVIGRMRTRlvRKRFLCLGWGLPALVVAVSVGFTRTkGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVN-ML 1032
Cdd:cd15440    89 GFQLYVmlvEVFEPEKSR--IKWYYLFGYGLPALIVAVSAGVDPT-GYGTEDHCWLSTENGFIWSFVGPVIVVLLANlVF 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1033 IGIIVFnkLMARDGVSDKSKKQRAGSERCPWaslllpcsacgavpspllssasarnamaslW--SSCVVLPLLALTWMSA 1110
Cdd:cd15440   166 LGMAIY--VMCRHSSRSASKKDASKLKNIRG------------------------------WlkGSIVLVVLLGLTWTFG 213
                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 314122229 1111 VLAMtDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15440   214 LLFI-NQESIVMAYIFTILNSLQGLFIFIFHCVLNEKVR 251
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
877-1149 1.61e-32

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 127.62  E-value: 1.61e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLtlLAIYA-AFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLT 955
Cdd:cd15252    10 VGIIISLVCLA--ICIFTfWFFRGLQSDRTTIHKNLCISLFLAELVFLIGINTTTNKIFCSVIAGLLHYFFLAAFAWMFI 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  956 EAWQSYLAVIGRMRTR-LVRKRFLCLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNML-I 1033
Cdd:cd15252    88 EGIQLYLMLVEVFENEgSRHKNFYIFGYGSPAVIVGVSAALG-YRYYGTTKVCWLSTENYFIWSFIGPATLIILLNLIfL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1034 GIIVFnklmardgvsdkskkqragsERCPWASLLLPCSACGAvpspllssasarNAMASLWSSCVVLPLLALTWMSAVLA 1113
Cdd:cd15252   167 GVAIY--------------------KMFRHTAGLKPEVSCLE------------NIRSWARGAIALLFLLGLTWIFGVLH 214
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 314122229 1114 MtDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15252   215 I-NHASVVMAYLFTVSNSLQGMFIFLFHCVLSRKVR 249
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
877-1160 1.47e-31

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 125.26  E-value: 1.47e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLtLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15438    10 VGLSVSLFCLF-LCILTFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLLGINNTNNQVACAVVAGLLHYFFLAAFCWMSLE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRTRLVRKRFLCL-GWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGI 1035
Cdd:cd15438    89 GVELYLMVVQVFNTQSLKKRYLLLiGYGVPLVIVAISAAVN-SKGYGTQRHCWLSLERGFLWSFLGPVCLIILVNAIIFV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1036 IVFNKLMAR----DGVSDKSKKQRAgsercpwaslllpcsacgavpspLLSSASARnamaslwsscvvLPLLALTWMSAV 1111
Cdd:cd15438   168 ITVWKLAEKfssiNPDMEKLRKIRA-----------------------LTITAIAQ------------LCILGCTWIFGF 212
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1112 LAMTDrRSVLFQALFAVFNSAQGFVITAVHCFLRREV-QDVVKCQMGVCR 1160
Cdd:cd15438   213 FQFSD-STLVMSYLFTILNSLQGLFIFLLHCLLSKQVrEEYSRWLCAIAR 261
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
877-1148 5.58e-31

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 123.13  E-value: 5.58e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15441    10 IGIGISLVLLVIAFLVLSCL-RGLQSNSNSIHKNLVACLLLAELLFLLGINQTENLFPCKLIAILLHYFYLSAFSWLLVE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYlavigRMRT--RLVRK---RF-LCLGWGLPALVVAVSVGFtRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVN 1030
Cdd:cd15441    89 SLHLY-----RMLTepRDINHghmRFyYLLGYGIPAIIVGLSVGL-RPDGYGNPDFCWLSVNETLIWSFAGPIAFVIVIT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1031 MLIGIivfnkLMARDGVSDKSKKQRAGSERcpwaslllpcsacgavpspllssasarnamASLWSSCVVLPLLALTWMSA 1110
Cdd:cd15441   163 LIIFI-----LALRASCTLKRHVLEKASVR------------------------------TDLRSSFLLLPLLGATWVFG 207
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 314122229 1111 VLAMTDrRSVLFQALFAVFNSAQGFVITAVHCFLRREV 1148
Cdd:cd15441   208 LLAVNE-DSELLHYLFAGLNFLQGLFIFLFYCIFNKKV 244
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
877-1150 3.57e-28

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 115.13  E-value: 3.57e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVS--CM--ALLTLLaiyaaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCW 952
Cdd:cd15439    10 VGLIISllCLflAILTFL-----LCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKVLCSIIAGFLHYLFLACFAW 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  953 VLTEAWQSYLAV-----IGRMRTRLVRKRFLCL-GWGLPALVVAVSVGfTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVI 1026
Cdd:cd15439    85 MFLEAVHLFLTVrnlkvVNYFSSHRFKKRFMYPvGYGLPAVIVAISAA-VNPQGYGTPKHCWLSMEKGFIWSFLGPVCVI 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1027 VLVNMLIGIIVFNKLMARdgvsdkskkqragsercpwaslllpcsacgavpsplLSS-----ASARNAMASLWSSCVVLP 1101
Cdd:cd15439   164 IVINLVLFCLTLWILREK------------------------------------LSSlnaevSTLKNTRLLTFKAIAQLF 207
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 314122229 1102 LLALTWMSAVLAMTDRRSVLfQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15439   208 ILGCTWILGLFQVGPVATVM-AYLFTITNSLQGVFIFLVHCLLNRQVRE 255
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
877-1153 2.44e-27

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 113.18  E-value: 2.44e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSE-----RSIILLNFCLSILASNILILVG---QSRVLSKGVCTMTAAFLHFFFLS 948
Cdd:cd15932    10 VGLGISILSLVLCLIIEALVWKSVTKNktsymRHVCLVNIALSLLIADIWFIIGaaiSTPPNPSPACTAATFFIHFFYLA 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  949 SFCWVLTeawqsyLAVIGRMRTRLV-----RKRFL----CLGWGLPALVVAVSVGFTR-TKGYGTSSYCWLSL-EGGLLY 1017
Cdd:cd15932    90 LFFWMLT------LGLLLFYRLVLVfhdmsKSTMMaiafSLGYGCPLIIAIITVAATApQGGYTRKGVCWLNWdKTKALL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1018 AFVGPAAVIVLVNMLIGIIVFNKLMaRDGVSDKSKKQRagsercpwaslllpcsacgavpspllssasaRNAMASLWSSC 1097
Cdd:cd15932   164 AFVIPALAIVVVNFIILIVVIFKLL-RPSVGERPSKDE-------------------------------KNALVQIGKSV 211
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 314122229 1098 VVL-PLLALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15932   212 AILtPLLGLTWGFGLGTMIDPKSLAFHIIFAILNSFQGFFILVFGTLLDSKVREALL 268
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
877-1153 7.04e-27

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 111.56  E-value: 7.04e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRF--IKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVL 954
Cdd:cd15256    10 VGCSLSIFCLAITLVTFAVLSSVstIRNQRYHIHANLSFAVLVAQILLLISFRFEPGTLPCKIMAILLHFFFLSAFAWML 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  955 TEAWQSYLAVIGRMRTRLVRKRFLC-LGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNmlI 1033
Cdd:cd15256    90 VEGLHLYSMVIKVFGSEESKHFYYYgIGWGSPLLICIISLTSA-LDSYGESDNCWLSLENGAIWAFVAPALFVIVVN--I 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1034 GI-IVFNKLMARDGvSDKSKKQRAgsercpwaslllpcsacgavPSPLLSSASArnamaslwsSCVVLPLLALTWMSAVL 1112
Cdd:cd15256   167 GIlIAVTRVISRIS-ADNYKVHGD--------------------ANAFKLTAKA---------VAVLLPILGSSWVFGVL 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 314122229 1113 AMtDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15256   217 AV-NTHALVFQYMFAIFNSLQGFFIFLFHCLLNSEVRAAFK 256
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
884-1150 7.99e-26

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 108.42  E-value: 7.99e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  884 MALLTLLAIYAAFWRF--IKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSY 961
Cdd:cd15437    14 ISLICLSMCIFTFWFFseIQSTRTTIHKNLCCSLFLAELIFLIGINMNANKLFCSIIAGLLHYFFLAAFAWMCIEGIHLY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  962 LAVIGRMRTR-LVRKRFLCLGWGLPALVVAVS--VGFtrtKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNML-IGIIV 1037
Cdd:cd15437    94 LIVVGVIYNKgFLHKNFYIFGYGSPAVVVGISaaLGY---KYYGTTKVCWLSTENNFIWSFIGPACLIILVNLLaFGVII 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1038 FnklmardgvsdksKKQRAGSERCPWASLLLPCSACgavpspllssasARNAMASLWsscvvlpLLALTWMSAVLAMTdR 1117
Cdd:cd15437   171 Y-------------KVFRHTAMLKPEVSCYENIRSC------------ARGALALLF-------LLGATWIFGVLHVV-Y 217
                         250       260       270
                  ....*....|....*....|....*....|...
gi 314122229 1118 RSVLFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15437   218 GSVVTAYLFTISNAFQGMFIFIFLCVLSRKIQE 250
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
877-1154 1.15e-25

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 107.96  E-value: 1.15e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15436    10 VGIVISLVCLLICIFTFC-FFRGLQTDRNTIHKNLCINLFIAELLFLIGINRTQYTIACPIFAGLLHFFFLAAFCWLCLE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRTRLVRKRFLCL-GWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGI 1035
Cdd:cd15436    89 GVQLYLLLVEVFESEYSRRKYFYLcGYSFPALVVAVSAAID-YRSYGTEKACWLRVDNYFIWSFIGPVTFVITLNLVFLV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1036 IVFNKLMARdgvsdkskkqragsercpwASLLLPCSACgavpspllssasARNAMASLWSSCVVLPLLALTWMSAVLAMt 1115
Cdd:cd15436   168 ITLHKMVSH-------------------SDLLKPDSSR------------LDNIKSWALGAIALLFLLGLTWSFGLMFI- 215
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 314122229 1116 DRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ-DVVKC 1154
Cdd:cd15436   216 NEESVVMAYLFTIFNAFQGVFIFIFHCALQKKVRkEYSKC 255
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
872-1154 3.81e-24

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 103.46  E-value: 3.81e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  872 SVPLVIGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFC 951
Cdd:cd16007     5 SVITWVGIVISLVCLAICISTFC-FLRGLQTDRNTIHKNLCINLFLAELLFLIGIDKTQYQIACPIFAGLLHFFFLAAFS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  952 WVLTEAWQSYLAVIGRMRTRLVRKRFLCL-GWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVN 1030
Cdd:cd16007    84 WLCLEGVQLYLMLVEVFESEYSRKKYYYLcGYCFPALVVGISAAID-YRSYGTEKACWLRVDNYFIWSFIGPVSFVIVVN 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1031 MLIGIIVFNKLMARDGV--SDKSKKQRAGSercpWaslllpcsACGAVpspllssasarnamaslwsscVVLPLLALTWM 1108
Cdd:cd16007   163 LVFLMVTLHKMIRSSSVlkPDSSRLDNIKS----W--------ALGAI---------------------TLLFLLGLTWA 209
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 314122229 1109 SAVLaMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREV-QDVVKC 1154
Cdd:cd16007   210 FGLL-FINKESVVMAYLFTTFNAFQGMFIFIFHCALQKKVhKEYSKC 255
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
877-1149 7.03e-24

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 102.71  E-value: 7.03e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd16005    10 VGILLSLVCLLICIFTFC-FFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRTRLVRKR-FLCLGWGLPALVVAVSVGfTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGI 1035
Cdd:cd16005    89 GVQLYIMLVEVFESEHSRRKyFYLVGYGMPALIVAVSAA-VDYRSYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLG 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1036 IVFNKLMARdgvsdkskkqragsercpwASLLLPCSACgavpspllssasARNAMASLWSSCVVLPLLALTWMSAVLAMT 1115
Cdd:cd16005   168 IALYKMFHH-------------------TAILKPESGC------------LDNIKSWVIGAIALLCLLGLTWAFGLMYIN 216
                         250       260       270
                  ....*....|....*....|....*....|....
gi 314122229 1116 DrRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd16005   217 E-STVIMAYLFTIFNSLQGMFIFIFHCVLQKKVR 249
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
877-1154 8.76e-24

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 102.30  E-value: 8.76e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd16006    10 VGIVISLVCLAICIFTFC-FFRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTEYKIACPIFAGLLHFFFLAAFAWMCLE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 AWQSYLAVIGRMRTRLVRKRFLCL-GWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGI 1035
Cdd:cd16006    89 GVQLYLMLVEVFESEYSRKKYYYVaGYLFPATVVGVSAAID-YKSYGTEKACWLRVDNYFIWSFIGPVTFIILLNLIFLV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1036 IVFNKlMARDGVSDKSKKQRAGSERcPWASlllpcsacGAVpspllssasarnamaslwsscVVLPLLALTWMSAVLAMT 1115
Cdd:cd16006   168 ITLCK-MVKHSNTLKPDSSRLENIK-SWVL--------GAF---------------------ALLCLLGLTWSFGLLFIN 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 314122229 1116 DrRSVLFQALFAVFNSAQGFVITAVHCFLRREV-QDVVKC 1154
Cdd:cd16006   217 E-ETIVMAYLFTIFNAFQGMFIFIFHCALQKKVrKEYSKC 255
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
877-1150 5.28e-23

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 100.61  E-value: 5.28e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRF-----IKSERSIILLNFCLSILASNILILvGQSRVLSKG---VCTMTAAFLHFFFLS 948
Cdd:cd15253    10 VGLGASILALLLCLGIYRLVWRSvvrnkISYFRHMTLVNIAFSLLLADTCFL-GATFLSAGHespLCLAAAFLCHFFYLA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  949 SFCWVLTEA---WQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKG-YGTSSYCWLSLEGGLLYAFVGPAA 1024
Cdd:cd15253    89 TFFWMLVQAlmlFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRqYLHEGACWLNGESGAIYAFSIPVL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1025 VIVLVNMLIGIIVFNKLMaRDGVSDKSKkqragsercpwaslllpcsacgavpspllssASARNAMASLWSSCVVL-PLL 1103
Cdd:cd15253   169 AIVLVNLLVLFVVLMKLM-RPSVSEGPP-------------------------------PEERKALLSIFKALLVLtPVF 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 314122229 1104 ALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15253   217 GLTWGLGVATLTGESSQVSHYGFAILNAFQGVFILLFGCLMDKKVRE 263
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
873-1150 1.10e-22

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 99.51  E-value: 1.10e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  873 VPLVIGCAVSCMALLTLLAIyaafwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCW 952
Cdd:cd15931    10 VGVIVSLFCLGLAIFTFLLC-----RWIPKINTTAHLHLCLCLSMSHTLFLAGIEYVENELACTVMAGLLHYLFLASFVW 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  953 VLTEAWQSYLAV-----IGRMRTRLVRKRFLCL-GWGLPALVVAVSvGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVI 1026
Cdd:cd15931    85 MLLEALQLHLLVrrltkVQVIQRDGLPRPLLCLiGYGVPFLIVGVS-ALVYSDGYGEAKMCWLSQERGFNWSFLGPVIAI 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1027 VLVNMLIGIIVFNKLmardgvsdkskKQRAGSERCPWASLllpcsacgavpspllssasaRNAMASLWSSCVVLPLLALT 1106
Cdd:cd15931   164 IGINWILFCATLWCL-----------RQTLSNMNSDISQL--------------------KDTRLLTFKAVAQLFILGCT 212
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 314122229 1107 WMSAvLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15931   213 WVLG-LFQTNPVALVFQYLFTILNSLQGAFLFLVHCLLNKEVRE 255
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
877-1156 1.77e-20

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 93.19  E-value: 1.77e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQ--SRVLSKGVCTMTAAFLHFFFLSSFCWVL 954
Cdd:cd15997    10 LGCGISSIFLGITLVTYLAFEKLRRDYPSKILINLCTALLMLNLVFLLNSwlSSFNNYGLCITVAAFLHYFLLASFTWMG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  955 TEAWQSYLAVIgRMRTRLVRK---RFLCLGWGLPALVVAVsVGFTRTKGYGTSS----------YCWLSLEGGLLYAFVG 1021
Cdd:cd15997    90 LEAVHMYFALV-KVFNIYIPNyilKFCIAGWGIPAVVVAL-VLAINKDFYGNELssdslhpstpFCWIQDDVVFYISVVA 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1022 PAAVIVLVNMLIGIIVFNKLMardgvSDKSKKQRAGSERCPWASLllpcsacgavpspllssasarNAMASLwsscvvLP 1101
Cdd:cd15997   168 YFCLIFLCNISMFITVLIQIR-----SMKAKKPSRNWKQGFLHDL---------------------KSVASL------TF 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229 1102 LLALTWMSAVLAMTDRRsVLFQALFAVFNSAQGFVITAVHCFLRREVQDvvKCQM 1156
Cdd:cd15997   216 LLGLTWGFAFFAWGPVR-IFFLYLFSICNTLQGFFIFVFHCLMKENVRK--QWRI 267
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
880-1153 1.33e-19

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 90.29  E-value: 1.33e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  880 AVSCMALLtLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQ 959
Cdd:cd15991    13 SLSLVALL-ITFILLVLIRTLRSNLHSIHKNLVAALFFSELIFLIGINQTENPFVCTVVAILLHYFYMSTFAWMFVEGLH 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  960 SYlavigRMRTRlVRK------RFL-CLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNML 1032
Cdd:cd15991    92 IY-----RMLTE-VRNintghmRFYyVVGWGIPAIITGLAVGLD-PQGYGNPDFCWLSVQDTLIWSFAGPIGIVVIINTV 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1033 IGIIVFNKLMARdgvsdkskKQRAGSErcpwaslllpcsacgavpspllssasaRNAMASLWSSCVVLPLLALTWMSAVL 1112
Cdd:cd15991   165 IFVLAAKASCGR--------RQRYFEK---------------------------SGVISMLRTAFLLLLLISATWLLGLM 209
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 314122229 1113 AMtDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15991   210 AV-NSDTLSFHYLFAIFSCLQGIFIFFFHCIFNKEVRKHLK 249
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
877-1149 5.24e-19

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 88.73  E-value: 5.24e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSK---GVCTMTAAFLHFFFLSSFCWV 953
Cdd:cd15444    10 IGCGLSAIFLSVTLVTYIAFEKIRRDYPSKILIQLCVALLLLNLVFLLDSWIALYKdivGLCISVAVFLHYFLLVSFTWM 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  954 LTEAWQSYLAVIGRMRTrLVRK---RFLCLGWGLPALVVAVSVGFTRTKgYGTSSY-----------CWLSLEGGLLYAF 1019
Cdd:cd15444    90 GLEAFHMYLALVKVFNT-YIRKyilKFCIVGWGVPAVVVAIVLAVSKDN-YGLGSYgkspngstddfCWINNNIVFYITV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1020 VGPAAVIVLVNMLIGIIVFNKLmardgVSDKSKKQRagsercpwaslllpcsacgavpspllsSASARNAMASLWSSCVV 1099
Cdd:cd15444   168 VGYFCVIFLLNISMFIVVLVQL-----CRIKKQKQL---------------------------GAQRKTSLQDLRSVAGI 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1100 LPLLALTWMSAVLAMTDrRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15444   216 TFLLGITWGFAFFAWGP-VNLAFMYLFAIFNTLQGFFIFIFYCVAKENVR 264
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
877-1153 6.63e-18

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 85.29  E-value: 6.63e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTE 956
Cdd:cd15255    10 IGCGVSLCALIVTFILFLAV-GVPKSERTTVHKNLIFALAAAEFLLMFSEWAKGNQVACWAVTALLHLFFLAAFSWMLVE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  957 A---WQSYLAVigRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKgYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMli 1033
Cdd:cd15255    89 GlllWSKVVAV--NMSEDRRMKFYYVTGWGLPVVIVAVTLATSFNK-YVADQHCWLNVQTDIIWAFVGPVLFVLTVNT-- 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1034 gIIVFNKLMardgVSDKSKKQRagsercpwASLLLPcsacgavpspllSSASARNAMASLWSSC----VVLPLLALTWMS 1109
Cdd:cd15255   164 -FVLFRVVM----VTVSSARRR--------AKMLTP------------SSDLEKQIGIQIWATAkpvlVLLPVLGLTWLC 218
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 314122229 1110 AVLAmtdRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15255   219 GVLV---HLSDVWAYVFITLNSFQGLYIFLVYAIYNSEVRNAIQ 259
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
877-1137 6.83e-18

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 86.08  E-value: 6.83e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVScMALLTLLAIYAAFWRFIKSER-SIILLNFCLSILASNILILVGQSRV-------------------------L 930
Cdd:cd15257    10 IGCVLS-IAGLVITIIFHLHTRKLRKSSvTWVLLNLCSSLLLFNIIFTSGVENTnndyeistvpdretntvllseeyveP 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  931 SKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRT--RLVRKRFLCLGWGLPALVVAVSVGFT---------RTK 999
Cdd:cd15257    89 DTDVCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRMMKPlpEMFILQASAIGWGIPAVVVAITLGATyrfptslpvFTR 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1000 GYGTSSYCWL-------SLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMARDgVSDKSKKQRAgsercpwaslllpcsa 1072
Cdd:cd15257   169 TYRQEEFCWLaaldknfDIKKPLLWGFLLPVGLILITNVILFIMTSQKVLKKN-NKKLTTKKRS---------------- 231
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 314122229 1073 cgavpspllssasarnAMASLWSSCVVLPLLALTWMSA--VLAMTDRRSVLFQALFAVFNSAQGFVI 1137
Cdd:cd15257   232 ----------------YMKKIYITVSVAVVFGITWILGylMLVNNDLSKLVFSYIFCITNTTQGVQI 282
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
877-1149 1.64e-17

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 84.39  E-value: 1.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSK--GVCTMTAAFLHFFFLSSFCWVL 954
Cdd:cd15258    10 VGCGISAIFLAITILTYIAFRKLRRDYPSKIHMNLCAALLLLNLAFLLSSWIASFGsdGLCIAVAVALHYFLLACLTWMG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  955 TEAWQSYLAViGRMRTRLVRKRFL---CLGWGLPALVVAVsVGFTRTKGYGTSSY-----------CWLSLEGGLLYAFV 1020
Cdd:cd15258    90 LEAFHLYLLL-VKVFNTYIRRYILklcLVGWGLPALLVTL-VLSVRSDNYGPITIpngegfqndsfCWIRDPVVFYITVV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1021 GPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKKQRAgsercpWASLLlpcsacgavpspllssasarnAMASLWSscvvl 1100
Cdd:cd15258   168 GYFGLTFLFNMVMLATVLVQICRLREKAQATPRKRA------LHDLL---------------------TLLGLTF----- 215
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 314122229 1101 pLLALTWMSAVLAMTDRRsVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15258   216 -LLGLTWGLAFFAWGPFN-LPFLYLFAIFNSLQGFFIFIWYCSMKENVR 262
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
884-1153 7.64e-17

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 82.18  E-value: 7.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  884 MALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLA 963
Cdd:cd15992    16 LGFLLLTFLFLLCLRALRSNKTSIRKNGATALFLSELVFILGINQADNPFACTVIAILLHFFYLCTFSWLFLEGLHIYRM 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  964 V-------IGRMRTrlvrkrFLCLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIi 1036
Cdd:cd15992    96 LsevrdinYGPMRF------YYLIGWGVPAFITGLAVGLD-PEGYGNPDFCWLSIYDTLIWSFAGPVAFAVSMNVFLYI- 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1037 vfnkLMARdgvSDKSKKQRAGSERCPWASlllpcsacgavpspllssasarnamaSLWSSCVVLPLLALTWMSAVLAMtD 1116
Cdd:cd15992   168 ----LSSR---ASCSAQQQSFEKKKGPVS--------------------------GLRTAFTVLLLVSVTCLLALLSV-N 213
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 314122229 1117 RRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15992   214 SDVILFHYLFAGFNCLQGPFIFLSHVVLLKEVRKALK 250
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
877-1150 1.70e-16

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 81.39  E-value: 1.70e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERS-----IILLNFCLSILASNILILV-----GQSRVLSKGVCTMTAAFLHFFF 946
Cdd:cd15254    10 IGLSISILSLAICIVIESLVWKSVTKNRTsymrhVCILNIAVSLLIADIWFIVvaaiqDQNYAVNGNVCVAATFFIHFFY 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  947 LSSFCWVLTEAWQSY--LAVIGRMRTRLVRKRF-LCLGWGLPALVVAVSVGFTRTK-GYGTSSYCWLSLEGG-LLYAFVG 1021
Cdd:cd15254    90 LCVFFWMLALGLMLFyrLVFILHDTSKTIQKAVaFCLGYGCPLIISVITIAVTLPRdSYTRKKVCWLNWEDSkALLAFVI 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1022 PAAVIVLVNMLIGIIVFNKLMaRDGVSDKSKKQRagsercpwaslllpcsacgavpspllssasaRNAMASLWSSCVVL- 1100
Cdd:cd15254   170 PALIIVAVNSIITVVVIVKIL-RPSIGEKPSKQE-------------------------------RSSLFQIIKSIGVLt 217
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1101 PLLALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQD 1150
Cdd:cd15254   218 PLLGLTWGFGLATVIKGSSIVFHILFTLLNAFQGLFILVFGTLWDKKVQE 267
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
884-1153 2.79e-16

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 80.27  E-value: 2.79e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  884 MALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSY-L 962
Cdd:cd15993    16 LAALVLTFSVLTCLRGLKSNTRGIHSNIAAALFLSELLFLLGINRTENQFLCTVVAILLHYFFLSTFAWLFVQGLHIYrM 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  963 AVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTrTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNmliGIIVfnklm 1042
Cdd:cd15993    96 QTEARNVNFGAMRFYYAIGWGVPAIITGLAVGLD-PEGYGNPDFCWISIHDKLVWSFAGPIVVVIVMN---GVMF----- 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1043 ardgvsdkskkqragsercpwasLLLPCSACgavpSPLLSSASARNAMASLWSSCVVLPLLALTWMSAVLAMTDrrSVL- 1121
Cdd:cd15993   167 -----------------------LLVARMSC----SPGQKETKKTSVLMTLRSSFLLLLLISATWLFGLLAVNN--SVLa 217
                         250       260       270
                  ....*....|....*....|....*....|..
gi 314122229 1122 FQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15993   218 FHYLHAILCCLQGLAVLLLFCVLNEEVQEAWK 249
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
877-1149 5.46e-16

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 79.93  E-value: 5.46e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQ--SRVLSKGVCTMTAAFLHFFFLSSFCWVL 954
Cdd:cd15996    10 IGCGISAIFSAATLLTYIAFEKLRRDYPSKILMNLSTALLFLNLVFLLDGwiASFEIDELCITVAVLLHFFLLATFTWMG 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  955 TEAWQSYLAVIGRMRTRLVRK--RFLCLGWGLPALVVAVSVGFTRT-----------KGYGTSSYCWLSLEGGLLYAFVG 1021
Cdd:cd15996    90 LEAIHMYIALVKVFNTYIRRYilKFCIIGWGLPALIVSIVLASTNDnygygyygkdkDGQGGDEFCWIKNPVVFYVTCAA 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1022 PAAVIVLVNMLIGIIVFNKLMARDGvsdkSKKQRAGSErcpwaslllpcsacgavpspllssasarNAMASLWSSCVVLP 1101
Cdd:cd15996   170 YFGIMFLMNVAMFIVVMVQICGRNG----KRSNRTLRE----------------------------EILRNLRSVVSLTF 217
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 314122229 1102 LLALTWMSAVLAMTDrRSVLFQALFAVFNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15996   218 LLGMTWGFAFFAWGP-VNLAFMYLFTIFNSLQGLFIFVFHCALKENVQ 264
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
303-353 1.89e-15

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 71.85  E-value: 1.89e-15
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    303 WEEWGSWSLCSRSCGRGSRSRMRTCV--PPQHGGKACEGPELQTKLCSMAACP 353
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCspPPQNGGGPCTGEDVETRACNEQPCP 53
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
876-1153 4.10e-15

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 77.07  E-value: 4.10e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSrVLSK-------GVCTMTAAFLHFFFLS 948
Cdd:cd15264     9 YLGFSISLVALAVALIIFLYF-RSLRCLRNNIHCNLIVTFILRNVTWFIMQN-TLTEihhqsnqWVCRLIVTVYNYFQVT 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  949 SFCWVLTEAWQSYLAVIGRMRTRLVRK-RFLCLGWGLPA-LVVAVSVGftrtKGYGTSSYCWLSLEGGLLYAFV--GPAA 1024
Cdd:cd15264    87 NFFWMFVEGLYLHTMIVWAYSADKIRFwYYIVIGWCIPCpFVLAWAIV----KLLYENEHCWLPKSENSYYDYIyqGPIL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1025 VIVLVNMLI-GIIVFnKLMArdgvsdkskKQRAgsercpwaslllpcsacgavpSPLLSSASARNAM-ASLwsscVVLPL 1102
Cdd:cd15264   163 LVLLINFIFlFNIVW-VLIT---------KLRA---------------------SNTLETIQYRKAVkATL----VLLPL 207
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229 1103 LALTWMSAVLAMTDRRSVlfQALFAVFN----SAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15264   208 LGITYMLFFINPGDDKTS--RLVFIYFNtflqSFQGLFVAVFYCFLNGEVRSAIR 260
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
876-1146 2.54e-14

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 74.95  E-value: 2.54e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAafwrFIKSERSI---ILLNFCLSILASNILILVGQ-SRVLSKGVCTMTAAFLHFFFLSSFC 951
Cdd:cd15039     9 LIGLIISLVFLLLTLAVYA----LLPELRNLhgkCLMCLVLSLFVAYLLLLIGQlLSSGDSTLCVALGILLHFFFLAAFF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  952 WVLTEAWQSYLAVIGRMRTRL---VRKRFL---CLGWGLPALVVAVSVGFTRTK-------GYGTsSYCWLSLEGGLLYA 1018
Cdd:cd15039    85 WLNVMSFDIWRTFRGKRSSSSrskERKRFLrysLYAWGVPLLLVAVTIIVDFSPntdslrpGYGE-GSCWISNPWALLLY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1019 FVGPAAVIVLVNMLIGIIVFNKLMardgvsdKSKKQRAGSErcpwaslllpcsacgavpspllSSASARNAMASLwssCV 1098
Cdd:cd15039   164 FYGPVALLLLFNIILFILTAIRIR-------KVKKETAKVQ----------------------SRLRSDKQRFRL---YL 211
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1099 VLPLL-ALTWMSAVLA-MTDRRSVLFQaLFAVFNSAQGFVITAVHCFLRR 1146
Cdd:cd15039   212 KLFVImGVTWILEIISwFVGGSSVLWY-IFDILNGLQGVFIFLIFVCKRR 260
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
809-862 2.73e-14

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 68.18  E-value: 2.73e-14
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|....
gi 314122229    809 TDPHCASWDYSRadtnsGDWNTESCQTLETQAAHTRCQCQHLSTFAVLAQPPKD 862
Cdd:smart00303    1 FNPICVFWDESS-----GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPPI 49
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
877-1153 3.18e-14

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 74.49  E-value: 3.18e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFW-RFIKSE----RSIILLNFCLSILASNILILVG---QSRVLSKGVCTMTAAFLHFFFLS 948
Cdd:cd15994    10 IGLGLSIFSLALCLTIEAVVWsHVTKTEitymRHVCIVNIATSLLIADVWFILAsivHNTALNYPLCVAATFFLHFFYLS 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  949 SFCWVLTEAW---QSYLAVIGRM-RTRLVRKRFlCLGWGLPALVVAVSVGFTR-TKGYGTSSYCWLSL-EGGLLYAFVGP 1022
Cdd:cd15994    90 LFFWMLTKALlilYGILLVFFKItKSVFIATAF-SIGYGCPLVIAVLTVAITEpKKGYLRPEACWLNWdETKALLAFIIP 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1023 AAVIVLVNML-IGIIVFNKLMARDGvsdKSKKQragsercpwaslllpcsacgavpspllssaSARNAMASLWSSCVVLP 1101
Cdd:cd15994   169 ALSIVVVNLIvVGVVVVKTQRSSIG---ESCKQ------------------------------DVSNIIRISKNVAILTP 215
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 314122229 1102 LLALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15994   216 LLGLTWGFGLATIIDSRSLPFHIIFALLNAFQGFFILLFGTILDRKIRIALY 267
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
811-856 9.48e-14

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 66.56  E-value: 9.48e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*.
gi 314122229   811 PHCASWDYSraDTNSGDWNTESCQTLETQAAHTRCQCQHLSTFAVL 856
Cdd:pfam01825    1 PQCVFWDFT--NSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
874-1148 7.18e-13

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 70.48  E-value: 7.18e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  874 PLV-IGCAVSCMALLTLLAIYAAFWRFIKSERSI--ILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSF 950
Cdd:cd15259     6 PVVyAGAALCLLCLLATIITYIVFHRLIRISRKGrhMLVNLCLHLLLTCVVFVGGINRTANQLVCQAVGILLHYSTLCTL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  951 CWV----------LTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGfTRTKGYGTSSYCWLSLEGGLLyAFV 1020
Cdd:cd15259    86 LWVgvtarnmykqVTKTAKPPQDEDQPPRPPKPMLRFYLIGWGIPLIICGITAA-VNLDNYSTYDYCWLAWDPSLG-AFY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1021 GPAAVIVLVNMLIGIivfnklmardgvsdkskkqragsercpwaslllpCSACgavpspLLSSASARNaMASLWSSCVVL 1100
Cdd:cd15259   164 GPAALIVLVNCIYFL----------------------------------RIYC------QLKGAPVSF-QSQLRGAVITL 202
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1101 PLLALTWMSAVLAMTDRR--SVLFQALFAVFNSAQGFVITAVHCFLRREV 1148
Cdd:cd15259   203 FLYVAMWACGALAVSQRYflDLVFSCLYGATCSSLGLFVLIHHCLSREDV 252
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
873-1153 2.60e-12

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 68.81  E-value: 2.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  873 VPLVIGCAVSCMALLTLLAIYAAFWRF--IKSERSIILLNFCLSILASNILILVGQSRVLSK------GVCTMTAAFLHF 944
Cdd:cd15445     3 IAVIINYLGHCISLVALLVAFVLFLRLrsIRCLRNIIHWNLITAFILRNATWFVVQLTMSPEvhqsnvVWCRLVTAAYNY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  945 FFLSSFCWVLTEAWQSYLAVIGRMRTRLVRK-RFLCLGWGLP-ALVVAVSVGftrtKGYGTSSYCWLSLEGGLL--YAFV 1020
Cdd:cd15445    83 FHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKwMFICIGWCIPfPIIVAWAIG----KLYYDNEKCWFGKRAGVYtdYIYQ 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1021 GPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKkqragsercpwaslllpcsacgavpspllsSASARNAMAslwSSCVVL 1100
Cdd:cd15445   159 GPMILVLLINFIFLFNIVRILMTKLRASTTSE------------------------------TIQYRKAVK---ATLVLL 205
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229 1101 PLLALTWMSA-VLAMTDRRS-VLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15445   206 PLLGITYMLFfVNPGEDEISrIVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAVR 260
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
414-464 4.02e-12

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 62.22  E-value: 4.02e-12
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    414 WGPWNAWSLCSKTCDTGWQRRFRMC--QASGTQGYPCEGTGEEVKPCSEKRCP 464
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCcsPPPQNGGGPCTGEDVETRACNEQPCP 53
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
305-352 6.01e-12

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 61.91  E-value: 6.01e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 314122229   305 EWGSWSLCSRSCGRGSRSRMRT-CVPPQHGGKACeGPELQTKLCSMAAC 352
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
TSP1 smart00209
Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.
358-408 5.10e-11

Thrombospondin type 1 repeats; Type 1 repeats in thrombospondin-1 bind and activate TGF-beta.


Pssm-ID: 214559 [Multi-domain]  Cd Length: 53  Bit Score: 59.14  E-value: 5.10e-11
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|...
gi 314122229    358 WLEWGPWGPCSSSCANGTQQRSRKCSVAGPAW--ATCAGALTDTRECSNLDCP 408
Cdd:smart00209    1 WSEWSEWSPCSVTCGGGVQTRTRSCCSPPPQNggGPCTGEDVETRACNEQPCP 53
TSP_1 pfam00090
Thrombospondin type 1 domain;
305-352 1.08e-10

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 58.20  E-value: 1.08e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 314122229   305 EWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMAAC 352
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
HormR smart00008
Domain present in hormone receptors;
467-531 3.23e-09

Domain present in hormone receptors;


Pssm-ID: 214468  Cd Length: 70  Bit Score: 54.83  E-value: 3.23e-09
                            10        20        30        40        50        60        70
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314122229    467 HEMCRDEYVMLMTWKRAAAGEIIYNKCPPNASG-----SASRRCLLSAQgvayWGL--PSFARCISHEYRYL 531
Cdd:smart00008    2 DLGCPATWDGIICWPQTPAGQLVEVPCPKYFSGfsyktGASRNCTENGG----WSPpfPNYSNCTSNDYEEL 69
TSP_1 pfam00090
Thrombospondin type 1 domain;
360-407 2.80e-08

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 51.26  E-value: 2.80e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 314122229   360 EWGPWGPCSSSCANGTQQRSRKCSVAGPAWATCAGALTDTRECSNLDC 407
Cdd:pfam00090    2 PWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
TSP_1 pfam00090
Thrombospondin type 1 domain;
415-463 3.00e-08

Thrombospondin type 1 domain;


Pssm-ID: 459668 [Multi-domain]  Cd Length: 49  Bit Score: 51.26  E-value: 3.00e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 314122229   415 GPWNAWSLCSKTCDTGWQRRFRMCQASGTQGYPCEGTGEEVKPCSEKRC 463
Cdd:pfam00090    1 SPWSPWSPCSVTCGKGIQVRQRTCKSPFPGGEPCTGDDIETQACKMDKC 49
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
877-1137 3.55e-08

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 56.73  E-value: 3.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVScMALLTLLAIYAAFWRF----IKSERSI-ILLNFCLSILASNI--LILVGQSRVLSKGVCTMTAAFLHFFFLSS 949
Cdd:cd15442    10 AGCGVS-MVFLIFTIILYFFLRFtyqkFKSEDAPkIHVNLSSSLLLLNLafLLNSGVSSRAHPGLCKALGGVTHYFLLCC 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  950 FCWVLTEAWQSYLAVIGRMRTrLVRKRF--LCL-GWGLPALVVAV-----SVG-FT-RTKGYGTS-SYCWLSlEGGLLYA 1018
Cdd:cd15442    89 FTWMAIEAFHLYLLAIKVFNT-YIHHYFakLCLvGWGFPALVVTItgsinSYGaYTiMDMANRTTlHLCWIN-SKHLTVH 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1019 FV---GPAAVIVLVNMLIGIIVFNKLMARDGVsdkskkqRAGSERC-PWaslllpcsacgavpspllssasaRNAMASLW 1094
Cdd:cd15442   167 YItvcGYFGLTFLFNTVVLGLVAWKIFHLQSA-------TAGKEKCqAW-----------------------KGGLTVLG 216
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 314122229 1095 SSCvvlpLLALTWMSAVLAMTDrRSVLFQALFAVFNSAQGFVI 1137
Cdd:cd15442   217 LSC----LLGVTWGLAFFTYGS-MSVPTVYIFALLNSLQGLFI 254
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
873-1153 4.71e-08

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 56.12  E-value: 4.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  873 VPLVIGCAVSCMALLTLLAIYAAFW--RFIKSERSIILLNFCLSILASNI----LILVGQSRVLSKGV-CTMTAAFLHFF 945
Cdd:cd15446     3 IALIINYLGHCISVGALVVAFLLFLclRSIRCLRNIIHWNLITTFILRNVmwflLQMIDHNIHESNEVwCRCITTIYNYF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  946 FLSSFCWVLTEAWQSYLAVIGRMRTRLVRK-RFLCLGWGLPA-LVVAVSVGftrtKGYGTSSYCWLSLEGGLL--YAFVG 1021
Cdd:cd15446    83 VVTNFFWMFVEGCYLHTAIVMTYSTDKLRKwVFLFIGWCIPCpIIVAWAIG----KLYYENEQCWFGKEPGKYidYIYQG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1022 PAAVIVLVNMLIGIIVFNKLMARDGVSDKSKkqragsercpwaslllpcsacgavpspllsSASARNAMAslwSSCVVLP 1101
Cdd:cd15446   159 PVILVLLINFVFLFNIVRILMTKLRASTTSE------------------------------TIQYRKAVK---ATLVLLP 205
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 314122229 1102 LLALTWMsaVLAMTDRRSVLFQALFAVFN----SAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15446   206 LLGITYM--LFFVNPGEDDISQIVFIYFNsflqSFQGFFVSVFYCFLNGEVRSAAR 259
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
878-1157 1.36e-07

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 54.74  E-value: 1.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  878 GCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVgQSRVL----SKGVCTM-TAAFLHFFFLSSFC- 951
Cdd:cd15271    11 GYGTSLTSLITAVLIFCTF-RKLHCTRNYIHINLFVSFILRALAVFI-KDAVLfadeSVDHCTMsTVACKAAVTFFQFCv 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  952 -----WVLTEAWqsYLAVIGRMRTRLVRKRFLC---LGWGLPALVVAVsvgFTRTKGYGTSSYCWLSLEGGLLYAFVGPA 1023
Cdd:cd15271    89 lanffWLLVEGM--YLQTLLLLTFTSDRKYFWWyilIGWGAPSVTVTV---WVLTRLQYDNRGCWDDLESRIWWIIKTPI 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1024 AVIVLVNMLIGI----IVFNKLMARD-GVSDKSKKQRAGSercpwaslllpcsacgavpspllssasarnamaslwSSCV 1098
Cdd:cd15271   164 LLSVFVNFLIFInvirILVQKLKSPDvGGNDTSHYMRLAK------------------------------------STLL 207
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 314122229 1099 VLPLLALTWMsaVLAM----TDRRSVLFQALfaVFNSAQGFVITAVHCFLRREVQDVVKCQMG 1157
Cdd:cd15271   208 LIPLFGVHYV--VFAFfpehVGVEARLYFEL--VLGSFQGFIVALLYCFLNGEVQAEIKKRLG 266
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
876-1156 1.71e-07

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 54.38  E-value: 1.71e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKG--VCTMTAAFLHFFFLSSFCWV 953
Cdd:cd15443     9 IVGCSISAAASLLTILLHFFSRKQPKDSTTRIHMNLLGSLFLLNGSFLLSPPLATSQStwLCRAAAALLHYSLLCCLTWM 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  954 LTEAWQSYLaVIGRMRTRLVRKRF--LC-LGWGLPALVVAVSVGFTR----------TKGYGTSSYCWLSLEGGLLYAFV 1020
Cdd:cd15443    89 AIEGFHLYL-LLVKVYNIYIRRYVlkLCvLGWGLPALIVLLVLIFKReaygphtiptGTGYQNASMCWITSSKVHYVLVL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1021 GPAAVIVLVNMLIGIIVFNKLMARdgvsdKSKKQRAGSERCpwaslllpcsacgavpspllssasaRNAMASLWSSCvvl 1100
Cdd:cd15443   168 GYAGLTSLFNLVVLAWVVRMLRRL-----RSRKQELGERAR-------------------------RDWVTVLGLTC--- 214
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 314122229 1101 pLLALTWMSAVLAMTDrrSVLFQA-LFAVFNSAQGFVITAVHCFLRREVQDVVKCQM 1156
Cdd:cd15443   215 -LLGTTWALAFFSFGV--FLIPQLfLFTIINSLYGFFICLWYCTQRRRSDASAKSST 268
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
876-1156 5.10e-07

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 53.14  E-value: 5.10e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILV---GQSRVLSKGVCTMTAAFLHF-------- 944
Cdd:cd15261     9 IVGLCLSLVSLIISLFIFSYF-RTLRNHRTRIHKNLFLAILLQVIIRLVlyiDQAITRSRGSHTNAATTEGRtinstpil 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  945 ----------FFLSSFCWVLTEAWqsYL---AVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKgYGTSSyCWLSl 1011
Cdd:cd15261    88 cegfyvlleyAKTVMFMWMFIEGL--YLhniIVVSVFSGKPNYLFYYILGWGIPIVHTSAWAIVTLIK-MKVNR-CWFG- 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1012 eggllYAFV-------GPAAVIVLVNMLIGIIVFNKLMARdgVSDKSKKQRAGSERcpwaslllpcsacgavpspllssa 1084
Cdd:cd15261   163 -----YYLTpyywileGPRLAVILINLFFLLNIIRVLVSK--LRESHSREIEQVRK------------------------ 211
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 314122229 1085 SARNAMaslwsscVVLPLLALT-WMSAVLAMTDRRSVLFqALFA----VFNSAQGFVITAVHCFLRREVQDVVKCQM 1156
Cdd:cd15261   212 AVKAAI-------VLLPLLGITnILQMIPPPLTSVIVGF-AVWSysthFLTSFQGFFVALIYCFLNGEVKNVLKKFW 280
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
876-1153 1.07e-06

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 51.84  E-value: 1.07e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVcTMTAAFLHFFFLSSFCWVLT 955
Cdd:cd15041     9 LVGYSLSLVALLPAIVIFLYF-RSLRCTRIRLHINLFLSFILRAVFWIIWDLLVVYDRL-TSSGVETVLMQNPVGCKLLS 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  956 EAWQ-SYLAVIGRM-------RTRLVR---------KRFLCLGWGLPALVV---AVSVGFTRTKGygtssyCWLSL-EGG 1014
Cdd:cd15041    87 VLKRyFKSANYFWMlceglylHRLIVVaffsepsslKLYYAIGWGLPLVIVviwAIVRALLSNES------CWISYnNGH 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1015 LLYAFVGPAAVIVLVNM--LIGI--IVFNKLmardgvsdkskkqragseRCpwaslllpcsacgavpSPLLSSASARNAM 1090
Cdd:cd15041   161 YEWILYGPNLLALLVNLffLINIlrILLTKL------------------RS----------------HPNAEPSNYRKAV 206
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 314122229 1091 -ASLwsscVVLPLLALTWMsavLAM-----TDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15041   207 kATL----ILIPLFGIQYL---LTIyrppdGSEGELVYEYFNAILNSSQGFFVAVIYCFLNGEVQSELK 268
7tmB2_GPR125 cd15999
G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G ...
874-1159 1.73e-06

G protein-coupled receptor 125, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR125 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, which also includes orphan receptors GPR123 and GPR124. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320665  Cd Length: 312  Bit Score: 51.79  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  874 PLVIGCAVSC-MALLTLLAIYAAFWRFIKSERSI--ILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSF 950
Cdd:cd15999     6 PVVYATAVVLlLCLLTIIVSYIYHHSLVRISRKSwhMLVNLCFHIFLTCAVFVGGINQTRNASVCQAVGIILHYSTLATV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  951 CWVLTEAWQSYLAVigrmrTRLVRK---------------RFLCLGWGLPALVVAVSVGfTRTKGYGT---SSYCWLSLE 1012
Cdd:cd15999    86 LWVGVTARNIYKQV-----TRKAKRcqdpdeppppprpmlRFYLIGGGIPIIVCGITAA-ANIKNYGSrpnAPYCWMAWE 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1013 GGlLYAFVGPAAVIVLVNMLIGIIVFNKLMA--------RDGVSDKSKKQRAGSERCPWASLLLPCSACGAVPSPLLSsa 1084
Cdd:cd15999   160 PS-LGAFYGPAGFIIFVNCMYFLSIFIQLKRhperkyelKEPTEEQQRLAASEHGELNHQDSGSSSASCSLVSTSALE-- 236
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 314122229 1085 SARNAMASLWSSCVVLPLLALTWMSAVLAMTDR--RSVLFQALFAVFNSAQGFVITAVHCFLRrevQDVVKCQMGVC 1159
Cdd:cd15999   237 NEHSFQAQLLGASLALFLYVALWIFGALAVSLYypMDLVFSCLFGATCLSLGAFLVVHHCVNR---EDVRRAWIATC 310
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
415-463 6.31e-06

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 44.58  E-value: 6.31e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 314122229   415 GPWNAWSLCSKTCDTGWQRRFRM-CQASGTQGYPCeGTGEEVKPCSEKRC 463
Cdd:pfam19028    4 SEWSEWSECSVTCGGGVQTRTRTvIVEPQNGGRPC-PELLERRPCNLPPC 52
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
877-1149 9.86e-06

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 48.97  E-value: 9.86e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVgQSRVLSK-----------GVCTMTAAFLHFF 945
Cdd:cd15275    10 VGYSVSLVSLAIALAILCSF-RRLHCTRNYIHMQLFLSFILRAISIFI-KDAVLFSseddnhcdiytVGCKVAMVFSNYC 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  946 FLSSFCWVLTEAWqsYLAVIGRMRTRLVRKR---FLCLGWGLPALVVAvsvgftrtkGYGTSSY------CW-LSLEGGL 1015
Cdd:cd15275    88 IMANYSWLLVEGL--YLHSLLSISFFSERKHlwwYIALGWGSPLIFII---------SWAIARYlhenegCWdTRRNAWI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1016 LYAFVGPAAVIVLVNML--IGI--IVFNKLMARDGVSDKSKKQRagseRCPWASLLLpcsacgavpspllssasarnama 1091
Cdd:cd15275   157 WWIIRGPVILSIFVNFIlfLNIlrILMRKLRAPDMRGNEFSQYK----RLAKSTLLL----------------------- 209
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1092 slwsscvvLPLLALTWMSAVLAMTDRRSVLF--QALFAV-FNSAQGFVITAVHCFLRREVQ 1149
Cdd:cd15275   210 --------IPLFGLHYILFAFFPEDVSSGTMeiWLFFELaLGSFQGFVVAVLYCFLNGEVQ 262
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
876-1156 2.91e-05

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 47.65  E-value: 2.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILIL------VGQSRVL--SKGVCTMTAAFLHFFFL 947
Cdd:cd15260     9 IGGYSVSLIALIISLAIFFSF-RSLRCTRITIHMNLFISFALNNLLWIvwyklvVDNPEVLleNPIWCQALHVLLQYFMV 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEAWQSYLA--VIGRMRTRLVRKrFLCLGWGLPALVVAVSVGFTRTKGYGTsSYCWLSlEGGLLYAFVGPAAV 1025
Cdd:cd15260    88 CNYFWMFCEGLYLHTVlvVAFISEKSLMRW-FIAIGWGVPLVITAIYAGVRASLPDDT-ERCWME-ESSYQWILIVPVVL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1026 IVLVNM--LIGIIVFnklmardgvsdKSKKQRAGSERCPwaslllpcsacgavpspllSSASARNAMASLwsscVVLPLL 1103
Cdd:cd15260   165 SLLINLifLINIVRV-----------LLTKLRATSPNPA-------------------PAGLRKAVRATL----ILIPLL 210
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 314122229 1104 ALTWmsavLAMTDRR------SVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQM 1156
Cdd:cd15260   211 GLQF----LLIPFRPepgaplETIYQYVSALLTSLQGLCVAVLFCFCNGEVIAAIKRKW 265
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
417-463 3.30e-05

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 42.83  E-value: 3.30e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229   417 WNA--WSLCSKTCDTGWQRRFRMCQASGTQ----GYPCEGTG--EEVKPCSEKRC 463
Cdd:pfam19030    1 WVAgpWGECSVTCGGGVQTRLVQCVQKGGGsivpDSECSAQKkpPETQSCNLKPC 55
TSP1_spondin pfam19028
Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an ...
360-407 3.52e-05

Spondin-like TSP1 domain; This entry represents a sub-type of TSP1 domains that have an alternative disulphide binding pattern compared to the canonical TSP1 domain.


Pssm-ID: 465948  Cd Length: 52  Bit Score: 42.65  E-value: 3.52e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 314122229   360 EWGPWGPCSSSCANGTQQRSRkcSVAGPA---WATCaGALTDTRECSNLDC 407
Cdd:pfam19028    5 EWSEWSECSVTCGGGVQTRTR--TVIVEPqngGRPC-PELLERRPCNLPPC 52
7tmB2_GPR123 cd16000
G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G ...
882-1159 3.95e-05

G protein-coupled receptor 123, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR123 is an orphan receptor that has been classified as that belongs to the group III of adhesion GPCRs, and also includes orphan receptors GPR124 and GPR125. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells, yet its biological function remains to be determined. Adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320666 [Multi-domain]  Cd Length: 275  Bit Score: 47.25  E-value: 3.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  882 SCMALLtLLAIYAAFWRFIKSERSI--------ILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWV 953
Cdd:cd16000    10 ACTAVM-LLCLFASIITYIVHHSTIrisrkgwhMLLNFCFHTALTFAVFAGGINRTKYPIICQAVGIVLHYSTLSTMLWI 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  954 LTEAWQSYLAVIGRMRT----------RLVRKRFLCLGWGLPALVVAVSVGfTRTKGYGTSS----YCWLSLEGGlLYAF 1019
Cdd:cd16000    89 GVTARNIYKQVTKKPHLcqdtdqppypKQPLLRFYLVSGGVPFIICGITAA-TNINNYGTEDedtpYCWMAWEPS-LGAF 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1020 VGPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKKQRAgsercpwaslllpcsacgavpspllssasarnAMASLWSSCVV 1099
Cdd:cd16000   167 YGPVAFIVLVTCIYFLCTYVQLRRHPERKYELKNEHS--------------------------------FKAQLRAAAFT 214
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 314122229 1100 LPLLALTWMSAVLAMTDRR--SVLFQALFAVFNSAQGFVITAVHCFLRrevQDVVKCQMGVC 1159
Cdd:cd16000   215 LFLFTATWAFGALAVSQGHflDMIFSCLYGAFCVTLGLFILIHHCAKR---DDVWHCWWSCC 273
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
977-1153 6.34e-05

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 46.86  E-value: 6.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  977 FLCLGWGLPALVVAVsvgFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLmardgvSDKSKKQRA 1056
Cdd:cd15984   138 FTLFGWGLPAVFVTI---WASVRATLADTGCWDLSAGNLKWIIQVPILAAIVVNFILFINIVRVL------ATKLRETNA 208
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1057 GseRCPwaslllpcsacgavpspllssaSARNAMASLWSSCVVLPLLALTWMsAVLAM--TDRRSVLFQALF---AVFNS 1131
Cdd:cd15984   209 G--RCD----------------------TRQQYRKLLKSTLVLMPLFGVHYI-VFMAMpyTEVSGILWQVQMhyeMLFNS 263
                         170       180
                  ....*....|....*....|..
gi 314122229 1132 AQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15984   264 FQGFFVAIIYCFCNGEVQAEIK 285
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
980-1153 1.01e-04

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 46.07  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  980 LGWGLPALVVAVsvgFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGVSDKSKkqragse 1059
Cdd:cd15983   136 IGWGLPAVFVSV---WASVRVSLADTQCWDLSAGNLKWIYQVPILAAILVNFFLFLNIVRVLASKLWETNTGK------- 205
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1060 rcpwaslLLPCSACGAVpspllssasarnamasLWSSCVVLPLLALTWMsAVLAM--TDRRSVLFQALF---AVFNSAQG 1134
Cdd:cd15983   206 -------LDPRQQYRKL----------------LKSTLVLMPLFGVHYV-LFMAMpyTDVTGLLWQIQMhyeMLFNSSQG 261
                         170
                  ....*....|....*....
gi 314122229 1135 FVITAVHCFLRREVQDVVK 1153
Cdd:cd15983   262 FFVAFIYCFCNGEVQAEIK 280
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
876-1155 1.14e-04

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 45.92  E-value: 1.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  876 VIGCAVSCMALLTLLAIYAaFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGV--------CTMTAAFLHFFFL 947
Cdd:cd15274     9 IVGHSLSIATLLISLGIFF-FFRSLSCQRVTLHKNLFLSYILNSIIIIIHLVAVVPNGElvarnpvsCKILHFIHQYMMG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  948 SSFCWVLTEA-WQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVgFTRTKGYGTSsyCWLSLEGGLLYAFVGPAAVI 1026
Cdd:cd15274    88 CNYFWMLCEGiYLHTLIVVAVFAEKQRLMWYYLLGWGFPLIPTTIHA-ITRAVYYNDN--CWLSSETHLLYIIHGPIMAA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1027 VLVNMLIGIIVFNKLMARDGVSDKSKKQRagsercpwaslllpcsacgavpspllssasarnAMASLWSSCVVLPLLALT 1106
Cdd:cd15274   165 LVVNFFFLLNIVRVLVTKLRETHEAESHM---------------------------------YLKAVKATLILVPLLGIQ 211
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 314122229 1107 WMSAVLAMTDRRSV-LFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQ 1155
Cdd:cd15274   212 FVLFPWRPSGKILGkIYDYVMHSLIHFQGFFVATIFCFCNGEVQATLKRQ 261
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
362-407 1.36e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 40.90  E-value: 1.36e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 314122229   362 GPWGPCSSSCANGTQQRSRKC------SVAGPAWATCAGALTDTRECSNLDC 407
Cdd:pfam19030    4 GPWGECSVTCGGGVQTRLVQCvqkgggSIVPDSECSAQKKPPETQSCNLKPC 55
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
877-1153 1.70e-04

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 45.05  E-value: 1.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLN-FCLSILASN--ILILVGQ-SRVLSKGVCTMTAAFLHFFFLSSFCW 952
Cdd:cd15263    10 IGYSLSLVALSLALWIFLYF-KDLRCLRNTIHTNlMFTYILADLtwILTLTLQvSIGEDQKSCIILVVLLHYFHLTNFFW 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  953 VLTEAWQSYLAVIGRMRTRLVRKR-FLCLGWGLPALVVAV-----SVGFTRTKGYGTS----SYCWLSLEGGLLYAFVGP 1022
Cdd:cd15263    89 MFVEGLYLYMLVVETFSGENIKLRvYAFIGWGIPAVVIVIwaivkALAPTAPNTALDPngllKHCPWMAEHIVDWIFQGP 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1023 AAVIVLVNM--LIGI--IVFNKLMARDGVsdKSKKQRAGSErcpwaSLLlpcsacgavpspllssasarnamaslwsscV 1098
Cdd:cd15263   169 AILVLAVNLvfLVRImwVLITKLRSANTV--ETQQYRKAAK-----ALL------------------------------V 211
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 314122229 1099 VLPLLALTWMSAVLAMTDRRS-VLFQALFAVFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15263   212 LIPLLGITYILVIAGPTEGIAaNIFEYVRAVLLSTQGFTVALFYCFLNTEVRNTLR 267
PTZ00441 PTZ00441
sporozoite surface protein 2 (SSP2); Provisional
301-355 1.76e-04

sporozoite surface protein 2 (SSP2); Provisional


Pssm-ID: 240420 [Multi-domain]  Cd Length: 576  Bit Score: 46.11  E-value: 1.76e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 314122229  301 GVWEEWgswSLCSRSCGRGSRSRMRtcvPPQHGGkaCEgPELQTKlCSMAACPVE 355
Cdd:PTZ00441  241 GPWDEW---TPCSVTCGKGTHSRSR---PILHEG--CT-THMVEE-CEEEECPVE 285
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
952-1155 3.30e-04

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 44.54  E-value: 3.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  952 WVLTEAWQSYLAVIGRMRTRLVRKR-FLCLGWGLPALVVavsVGFTRTKGYGTSSYCWlSLEGGLLYAFV--GPAAVIVL 1028
Cdd:cd15985   104 WFFVEAVYLYKLLIGAVFSEKNYYLlYLYLGWGTPVLFV---VPWMLAKYLKENKECW-ALNENMAYWWIirIPILLASL 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1029 VNMLIGIIVFNKLMArdgvsdkskKQRAGSERCPWASLllpcsacgavpspllssasaRNAMASLwsscVVLPLLALTWM 1108
Cdd:cd15985   180 INLLIFMRILKVILS---------KLRANQKGYADYKL--------------------RLAKATL----TLIPLFGIHEV 226
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1109 SAVLAMTDRRSVLF---QALFAVF-NSAQGFVITAVHCFLRREVQDVVKCQ 1155
Cdd:cd15985   227 VFIFATDEQTTGILryiKVFFTLFlNSFQGFLVAVLYCFANKEVKSELLKK 277
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
877-1153 3.53e-04

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 44.34  E-value: 3.53e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKG---VCTM-TAAFLHFFFLSSFC- 951
Cdd:cd15930    10 VGYSLSLTSLTTAMIILCLF-RKLHCTRNYIHMNLFVSFILRAIAVFIKDAVLFSSEdvdHCFVsTVGCKASMVFFQYCv 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  952 -----WVLTEA-WQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVsvgFTRTKGYGTSSYCW-LSLEGGLLYAFVGPAA 1024
Cdd:cd15930    89 manffWLLVEGlYLHTLLVISFFSERRYFWWYVLIGWGAPTVFVTV---WIVARLYFEDTGCWdINDESPYWWIIKGPIL 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1025 VIVLVNMLIGIIVFNKLMARDGVSDKSKKQRAGSERCPWASLLLpcsacgavpspllssasarnamaslwsscvvLPLLA 1104
Cdd:cd15930   166 ISILVNFVLFINIIRILLQKLRSPDIGGNESSQYKRLARSTLLL-------------------------------IPLFG 214
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 314122229 1105 LTWMsaVLAMT-DRRSVLFQALFA-VFNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15930   215 IHYI--VFAFFpENISLGIRLYFElCLGSFQGFVVAVLYCFLNGEVQAEIK 263
TSP1_ADAMTS pfam19030
Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found ...
307-357 4.52e-04

Thrombospondin type 1 domain; This subfamily of thrombospondin type 1 repeats are mainly found in ADAMTS proteins.


Pssm-ID: 465950 [Multi-domain]  Cd Length: 55  Bit Score: 39.74  E-value: 4.52e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 314122229   307 GSWSLCSRSCGRGSRSRMRTCVPPqhGGKACEGPElqtkLCSMAACPVEGQ 357
Cdd:pfam19030    4 GPWGECSVTCGGGVQTRLVQCVQK--GGGSIVPDS----ECSAQKKPPETQ 48
HRM pfam02793
Hormone receptor domain; This extracellular domain contains four conserved cysteines that ...
467-526 4.81e-04

Hormone receptor domain; This extracellular domain contains four conserved cysteines that probably for disulphide bridges. The domain is found in a variety of hormone receptors. It may be a ligand binding domain.


Pssm-ID: 397086  Cd Length: 64  Bit Score: 39.66  E-value: 4.81e-04
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 314122229   467 HEMCRDEYVMLMTWKRAAAGEIIYNKCPPNAS-----GSASRRCLLSAQgvayWGLPS---FARCISH 526
Cdd:pfam02793    1 GLGCPRTWDGILCWPRTPAGETVEVPCPDYFSgfdprGNASRNCTEDGT----WSEHPpsnYSNCTSN 64
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
877-1153 1.78e-03

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 42.10  E-value: 1.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  877 IGCAVSCMALLTLLAIYAAFwRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGV------------CTMTAAFLHF 944
Cdd:cd15986    10 LGHSVSLIALTTGSTILCLF-RKLHCTRNYIHLNLFFSFILRAISVLVKDDILYSSSNtehctvppsligCKVSLVILQY 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229  945 FFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVavsVGFTRTKGYGTSSYCWLSLEGGLLYAFVG-PA 1023
Cdd:cd15986    89 CIMANFYWLLVEGLYLHTLLVVIFSENRHFIVYLLIGWGIPTVFI---IAWIVARIYLEDTGCWDTNDHSVPWWVIRiPI 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 314122229 1024 AVIVLVNMLIGI----IVFNKLMARD-GVSDKSKKQRAGSercpwaslllpcsacgavpspllssasarnamaslwSSCV 1098
Cdd:cd15986   166 IISIILNFILFIsiirILLQKLRSPDvGGNDQSQYKRLAK------------------------------------STLL 209
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 314122229 1099 VLPLLALTWMSAVLaMTDRRSVLFQALFAV-FNSAQGFVITAVHCFLRREVQDVVK 1153
Cdd:cd15986   210 LIPLFGVHYIVFVY-FPDSSSSNYQIFFELcLGSFQGLVVAILYCFLNSEVQGELK 264
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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