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Conserved domains on  [gi|282398104|ref|NP_001164182|]
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ankyrin repeat and SOCS box protein 8 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
26-188 5.06e-43

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 148.95  E-value: 5.06e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVNCT-HGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEV 103
Cdd:COG0666   59 LAAALAGDLLVALLLLAAGADINAKdDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNgNLEIVKL 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK 183
Cdd:COG0666  139 LLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDND 218


                 ....*
gi 282398104 184 GQTPI 188
Cdd:COG0666  219 GKTAL 223
SOCS_ASB8 cd03727
SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a ...
 245-287 6.78e-20

SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


:

Pssm-ID: 239697  Cd Length: 43  Bit Score: 80.65  E-value: 6.78e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPVSLKDYLLLL 287
Cdd:cd03727    1 SAPGTLKALARYAVRRSLGVQYLPEAVKQLPLPRSVKEYLLLL 43
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
26-188 5.06e-43

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 148.95  E-value: 5.06e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVNCT-HGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEV 103
Cdd:COG0666   59 LAAALAGDLLVALLLLAAGADINAKdDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNgNLEIVKL 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK 183
Cdd:COG0666  139 LLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDND 218


                 ....*
gi 282398104 184 GQTPI 188
Cdd:COG0666  219 GKTAL 223
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 26-215 8.73e-24

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 100.91  E-value: 8.73e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVNCTHGT-LKPLHCACMVS-DADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACV-E 102
Cdd:PHA02876 313 LMAKNGYDTENIRTLIMLGADVNAADRLyITPLHQASTLDrNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIiN 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 103 VLLEYGANPNALDGNRDTPLHWAAFKNNA-ECVRALLESGASVNALDYNNDTPLSWAAMKG-NLESVSILLDYGAEVRVI 180
Cdd:PHA02876 393 TLLDYGADIEALSQKIGTALHFALCGTNPyMSVKTLIDRGANVNSKNKDLSTPLHYACKKNcKLDVIEMLLDNGADVNAI 472

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 282398104 181 NLKGQTPIsrLVALLVRGL-------GTEKEDScfELLHRAV 215
Cdd:PHA02876 473 NIQNQYPL--LIALEYHGIvnillhyGAELRDS--RVLHKSL 510
Ank_2 pfam12796
Ankyrin repeats (3 copies);
57-148 3.68e-21

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 85.55  E-value: 3.68e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   57 LHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEA-CVEVLLEYgANPNALDGNRdTPLHWAAFKNNAECVR 135
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLeIVKLLLEH-ADVNLKDNGR-TALHYAARSGHLEIVK 78

                          90
                  ....*....|...
gi 282398104  136 ALLESGASVNALD 148
Cdd:pfam12796  79 LLLEKGADINVKD 91
SOCS_ASB8 cd03727
SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a ...
 245-287 6.78e-20

SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239697  Cd Length: 43  Bit Score: 80.65  E-value: 6.78e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPVSLKDYLLLL 287
Cdd:cd03727    1 SAPGTLKALARYAVRRSLGVQYLPEAVKQLPLPRSVKEYLLLL 43
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
 51-192 3.99e-10

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 60.03  E-value: 3.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  51 HGTLKPLHCACMVSDADCVE-LLLEKGAEVNALDGYNRTALHYAA--EKDEACVeVLLEygANPNALD---------Gnr 118
Cdd:cd22192   15 RISESPLLLAAKENDVQAIKkLLKCPSCDLFQRGALGETALHVAAlyDNLEAAV-VLME--AAPELVNepmtsdlyqG-- 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 119 DTPLHWAAFKNNAECVRALLESGASVN--------------ALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKG 184
Cdd:cd22192   90 ETALHIAVVNQNLNLVRELIARGADVVspratgtffrpgpkNLIYYGEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLG 169


                 ....*...
gi 282398104 185 QTPISRLV 192
Cdd:cd22192  170 NTVLHILV 177
SOCS_box pfam07525
SOCS box; The SOCS box acts as a bridge between specific substrate- binding domains and more ...
 247-285 1.39e-07

SOCS box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases.


Pssm-ID: 462192  Cd Length: 39  Bit Score: 46.77  E-value: 1.39e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 282398104  247 PGTLKTLARYAVRRSLGlQYLPDAVKGLPLPVSLKDYLL 285
Cdd:pfam07525   2 PRSLQHLCRLAIRRALG-KRRLGAIDKLPLPPLLKDYLL 39
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
 67-178 1.74e-07

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 52.01  E-value: 1.74e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   67 DCVELLLEKGAEVNALDgynrTALHYAAEKDEACVEVLL--------EYGANPNALDGNRD------TPLHWAAFKNNAE 132
Cdd:TIGR00870  67 ELTELLLNLSCRGAVGD----TLLHAISLEYVDAVEAILlhllaafrKSGPLELANDQYTSeftpgiTALHLAAHRQNYE 142

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  133 CVRALLESGASVNA--------------LDYNNDTPLSWAAMKGNLESVSILLDYGAEVR 178
Cdd:TIGR00870 143 IVKLLLERGASVPAracgdffvksqgvdSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 117-146 4.80e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 42.57  E-value: 4.80e-06
                           10        20        30
                   ....*....|....*....|....*....|
gi 282398104   117 NRDTPLHWAAFKNNAECVRALLESGASVNA 146
Cdd:smart00248   1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
SOCS_box smart00969
The SOCS box acts as a bridge between specific substrate- binding domains and more generic ...
 249-286 6.02e-05

The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases;


Pssm-ID: 198037  Cd Length: 34  Bit Score: 39.31  E-value: 6.02e-05
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 282398104   249 TLKTLARYAVRRSLGlqylpdAVKGLPLPVSLKDYLLL 286
Cdd:smart00969   2 SLQHLCRLAIRRSLG------GIDKLPLPPRLKDYLLY 33
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
26-188 5.06e-43

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 148.95  E-value: 5.06e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVNCT-HGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEV 103
Cdd:COG0666   59 LAAALAGDLLVALLLLAAGADINAKdDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNgNLEIVKL 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK 183
Cdd:COG0666  139 LLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDND 218


                 ....*
gi 282398104 184 GQTPI 188
Cdd:COG0666  219 GKTAL 223
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
26-195 9.16e-42

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 145.48  E-value: 9.16e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVN-CTHGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEV 103
Cdd:COG0666   92 HAAARNGDLEIVKLLLEAGADVNaRDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANgNLEIVKL 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK 183
Cdd:COG0666  172 LLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKD 251

                        170
                 ....*....|..
gi 282398104 184 GQTPISRLVALL 195
Cdd:COG0666  252 GLTALLLAAAAG 263
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
22-187 1.16e-33

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 124.30  E-value: 1.16e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  22 LIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEAC 100
Cdd:COG0666   23 LLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNgDLEI 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 101 VEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVI 180
Cdd:COG0666  103 VKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLLEAGADVNAR 182


                 ....*..
gi 282398104 181 NLKGQTP 187
Cdd:COG0666  183 DNDGETP 189
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
37-188 3.20e-30

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 115.05  E-value: 3.20e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVNCTHGTLK-PLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEVLLEYGANPNAL 114
Cdd:COG0666  136 VKLLLEAGADVNAQDNDGNtPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENgHLEIVKLLLEAGADVNAK 215

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 282398104 115 DGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:COG0666  216 DNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 26-215 8.73e-24

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 100.91  E-value: 8.73e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  26 IAAIRSFPHDNVEDLIRGGADVNCTHGT-LKPLHCACMVS-DADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACV-E 102
Cdd:PHA02876 313 LMAKNGYDTENIRTLIMLGADVNAADRLyITPLHQASTLDrNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIiN 392

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 103 VLLEYGANPNALDGNRDTPLHWAAFKNNA-ECVRALLESGASVNALDYNNDTPLSWAAMKG-NLESVSILLDYGAEVRVI 180
Cdd:PHA02876 393 TLLDYGADIEALSQKIGTALHFALCGTNPyMSVKTLIDRGANVNSKNKDLSTPLHYACKKNcKLDVIEMLLDNGADVNAI 472

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 282398104 181 NLKGQTPIsrLVALLVRGL-------GTEKEDScfELLHRAV 215
Cdd:PHA02876 473 NIQNQYPL--LIALEYHGIvnillhyGAELRDS--RVLHKSL 510
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 37-181 3.05e-22

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 95.50  E-value: 3.05e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVN-CTHGTLKPLHCACM--VSDADCVELLLEKGAEVNALDGYNRTALHYAAE------------------ 95
Cdd:PHA03100  89 VKLLLEYGANVNaPDNNGITPLLYAISkkSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLEsnkidlkilkllidkgvd 168

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  96 ---KDEacVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLD 172
Cdd:PHA03100 169 inaKNR--VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLN 246


                 ....*....
gi 282398104 173 YGAEVRVIN 181
Cdd:PHA03100 247 NGPSIKTII 255
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 17-188 2.84e-21

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 92.72  E-value: 2.84e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  17 SLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTL-KPLHCACMVSDADCVELL----------------------- 72
Cdd:PHA02874  31 SVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIpHPLLTAIKIGAHDIIKLLidngvdtsilpipciekdmikti 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  73 LEKGAEVNALDGYNRTALHYAAEK-DEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNN 151
Cdd:PHA02874 111 LDCGIDVNIKDAELKTFLHYAIKKgDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 282398104 152 DTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:PHA02874 191 ESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPL 227
Ank_2 pfam12796
Ankyrin repeats (3 copies);
57-148 3.68e-21

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 85.55  E-value: 3.68e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   57 LHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEA-CVEVLLEYgANPNALDGNRdTPLHWAAFKNNAECVR 135
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLeIVKLLLEH-ADVNLKDNGR-TALHYAARSGHLEIVK 78

                          90
                  ....*....|...
gi 282398104  136 ALLESGASVNALD 148
Cdd:pfam12796  79 LLLEKGADINVKD 91
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
34-188 7.86e-21

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 89.63  E-value: 7.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  34 HDNVEDLIRGGADVNCTHGTLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK--DEACVEVLLEYGANP 111
Cdd:COG0666    1 LLLLLLLLLLLLAALLLLLLLALLLLAAALLLLLLLLLLLLLALLALALADALGALLLLAAALagDLLVALLLLAAGADI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 282398104 112 NALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:COG0666   81 NAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPL 157
Ank_2 pfam12796
Ankyrin repeats (3 copies);
90-181 1.05e-20

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 84.40  E-value: 1.05e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   90 LHYAAE-KDEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESgASVNALDYNNdTPLSWAAMKGNLESVS 168
Cdd:pfam12796   1 LHLAAKnGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKDNGR-TALHYAARSGHLEIVK 78

                          90
                  ....*....|...
gi 282398104  169 ILLDYGAEVRVIN 181
Cdd:pfam12796  79 LLLEKGADINVKD 91
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 7-222 2.23e-20

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 90.32  E-value: 2.23e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   7 YIMQSIQSKYSLSERLIrTIAAIRSFPHDNVED------LIRGGADVNCT--HGTLKPLHCACMVSDADCVELLLEKGAE 78
Cdd:PHA02878 115 EIFKIILTNRYKNIQTI-DLVYIDKKSKDDIIEaeitklLLSYGADINMKdrHKGNTALHYATENKDQRLTELLLSYGAN 193

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  79 VNALDGYNRTALHYAAEK-DEACVEVLLEYGANPNALDGNRDTPLHWA-AFKNNAECVRALLESGASVNALDY-NNDTPL 155
Cdd:PHA02878 194 VNIPDKTNNSPLHHAVKHyNKPIVHILLENGASTDARDKCGNTPLHISvGYCKDYDILKLLLEHGVDVNAKSYiLGLTAL 273

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 282398104 156 SwAAMKGNlESVSILLDYGAEVRVINLKGQTPISRLVallvrglgteKEDSCFELLHRAVGQFELRK 222
Cdd:PHA02878 274 H-SSIKSE-RKLKLLLEYGADINSLNSYKLTPLSSAV----------KQYLCINIGRILISNICLLK 328
PHA03095 PHA03095
ankyrin-like protein; Provisional
 35-187 4.62e-20

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 89.31  E-value: 4.62e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  35 DNVEDLIRGGADVNCTHGTLKPLHCACMVS----DADCVELLLEKGAEVNALDGYNRTALHYAAEKD--EACVEVLLEYG 108
Cdd:PHA03095  28 EEVRRLLAAGADVNFRGEYGKTPLHLYLHYssekVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNAttLDVIKLLIKAG 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 109 ANPNALDGNRDTPLH--WAAFKNNAECVRALLESGASVNALDYNNDTPLSwAAMKG---NLESVSILLDYGAEVRVINLK 183
Cdd:PHA03095 108 ADVNAKDKVGRTPLHvyLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA-VLLKSrnaNVELLRLLIDAGADVYAVDDR 186


                 ....
gi 282398104 184 GQTP 187
Cdd:PHA03095 187 FRSL 190
SOCS_ASB8 cd03727
SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a ...
 245-287 6.78e-20

SOCS (suppressors of cytokine signaling) box of ASB8-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB8 is highly transcribed in skeletal muscle and in lung carcinoma cell lines. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239697  Cd Length: 43  Bit Score: 80.65  E-value: 6.78e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPVSLKDYLLLL 287
Cdd:cd03727    1 SAPGTLKALARYAVRRSLGVQYLPEAVKQLPLPRSVKEYLLLL 43
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 28-193 7.34e-19

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 85.87  E-value: 7.34e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  28 AIRSFPHDNVEDLIRGGADVNC---THGTLKPLHCACMVS---DADCVELLLEKGAEVNALDGYNRTALHYAAEK---DE 98
Cdd:PHA03100  42 AKEARNIDVVKILLDNGADINSstkNNSTPLHYLSNIKYNltdVKEIVKLLLEYGANVNAPDNNGITPLLYAISKksnSY 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  99 ACVEVLLEYGANPNALDGNRDTPLHWAAFKN-----------------NAEC-VRALLESGASVNALDYNNDTPLSWAAM 160
Cdd:PHA03100 122 SIVEYLLDNGANVNIKNSDGENLLHLYLESNkidlkilkllidkgvdiNAKNrVNYLLSYGVPINIKDVYGFTPLHYAVY 201

                        170       180       190
                 ....*....|....*....|....*....|...
gi 282398104 161 KGNLESVSILLDYGAEVRVINLKGQTPISRLVA 193
Cdd:PHA03100 202 NNNPEFVKYLLDLGANPNLVNKYGDTPLHIAIL 234
PHA03095 PHA03095
ankyrin-like protein; Provisional
 34-188 1.27e-18

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 85.46  E-value: 1.27e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  34 HDNVED----LIRGGADVNCTHGTLK-PLH-CACMVS-DADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEV--- 103
Cdd:PHA03095  93 NATTLDviklLIKAGADVNAKDKVGRtPLHvYLSGFNiNPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELlrl 172

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAA--FKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLES--VSILLDYGAEVRV 179
Cdd:PHA03095 173 LIDAGADVYAVDDRFRSLLHHHLqsFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRslVLPLLIAGISINA 252


                 ....*....
gi 282398104 180 INLKGQTPI 188
Cdd:PHA03095 253 RNRYGQTPL 261
PHA03095 PHA03095
ankyrin-like protein; Provisional
 37-193 1.96e-18

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 84.69  E-value: 1.96e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVNCT--HGtLKPLHCAcMVS---DADCVELLLEKGAEVNALDGYNRTALHYAAE---KDEACVEVLLEYG 108
Cdd:PHA03095 135 IRLLLRKGADVNALdlYG-MTPLAVL-LKSrnaNVELLRLLIDAGADVYAVDDRFRSLLHHHLQsfkPRARIVRELIRAG 212

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 109 ANPNALDGNRDTPLHWAAFKNNAEC--VRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQT 186
Cdd:PHA03095 213 CDPAATDMLGNTPLHSMATGSSCKRslVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNT 292


                 ....*..
gi 282398104 187 PISRLVA 193
Cdd:PHA03095 293 PLSLMVR 299
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 56-198 3.34e-18

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 84.34  E-value: 3.34e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  56 PLHCACMV-SDADCVELLLEKGAEVNALDGYNRTALHYAAEK--DEACVEVLLEYGANPNALDGNRDTPLHWAA-FKNNA 131
Cdd:PHA02876 276 PLHHASQApSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNgyDTENIRTLIMLGADVNAADRLYITPLHQAStLDRNK 355

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 282398104 132 ECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK----------GQTPISRLVALLVRG 198
Cdd:PHA02876 356 DIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKigtalhfalcGTNPYMSVKTLIDRG 432
PHA03095 PHA03095
ankyrin-like protein; Provisional
 65-212 2.65e-16

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 78.53  E-value: 2.65e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  65 DADCVELLLEKGAEVNALDGYNRTALH----YAAEKDEACVEVLLEYGANPNALDGNRDTPLH-WAAFKNNAECVRALLE 139
Cdd:PHA03095  26 TVEEVRRLLAAGADVNFRGEYGKTPLHlylhYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHlYLYNATTLDVIKLLIK 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 140 SGASVNALDYNNDTPLSwAAMKG---NLESVSILLDYGAEVRVINLKGQTPIS----------RLVALLVRGLG--TEKE 204
Cdd:PHA03095 106 AGADVNAKDKVGRTPLH-VYLSGfniNPKVIRLLLRKGADVNALDLYGMTPLAvllksrnanvELLRLLIDAGAdvYAVD 184


                 ....*...
gi 282398104 205 DSCFELLH 212
Cdd:PHA03095 185 DRFRSLLH 192
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 28-243 4.19e-16

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 77.70  E-value: 4.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  28 AIRSFPHDNVEDLIRGGADVNCT--HGTLkPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAE-KDEACVEVL 104
Cdd:PHA02874 131 AIKKGDLESIKMLFEYGADVNIEddNGCY-PIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEyGDYACIKLL 209

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 105 LEYGANPNALDGNRDTPLHWAAFKNNAecVRALLESGASVNALDYNNDTPLSWAAM-KGNLESVSILLDYGAEVRVINLK 183
Cdd:PHA02874 210 IDHGNHIMNKCKNGFTPLHNAIIHNRS--AIELLINNASINDQDIDGSTPLHHAINpPCDIDIIDILLYHKADISIKDNK 287

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 282398104 184 GQTPIsrlvallvrglgtekeDSCFELLHRAVGQFELRKNGIMPREVTK--DQQLCEKLTVL 243
Cdd:PHA02874 288 GENPI----------------DTAFKYINKDPVIKDIIANAVLIKEADKlkDSDFLEHIEIK 333
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 70-214 6.00e-16

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 77.80  E-value: 6.00e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  70 ELLLEKGAEVNALDGYNRTALHYAAEKDEA-CVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRA------------ 136
Cdd:PHA02876 162 EMLLEGGADVNAKDIYCITPIHYAAERGNAkMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAiidnrsninknd 241

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 137 -----------------LLESGASVNALDYNNDTPLSWAAMKGNLES-VSILLDYGAEVRVINLKGQTPI---------- 188
Cdd:PHA02876 242 lsllkairnedletsllLYDAGFSVNSIDDCKNTPLHHASQAPSLSRlVPKLLERGADVNAKNIKGETPLylmakngydt 321

                        170       180
                 ....*....|....*....|....*..
gi 282398104 189 SRLVALLVRGLGTEKEDSCFEL-LHRA 214
Cdd:PHA02876 322 ENIRTLIMLGADVNAADRLYITpLHQA 348
Ank_2 pfam12796
Ankyrin repeats (3 copies);
28-115 3.38e-13

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 63.98  E-value: 3.38e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   28 AIRSFPHDNVEDLIRGGADVNCTHGT-LKPLHCACMVSDADCVELLLEKgAEVNaLDGYNRTALHYAAEKD-EACVEVLL 105
Cdd:pfam12796   4 AAKNGNLELVKLLLENGADANLQDKNgRTALHLAAKNGHLEIVKLLLEH-ADVN-LKDNGRTALHYAARSGhLEIVKLLL 81

                          90
                  ....*....|
gi 282398104  106 EYGANPNALD 115
Cdd:pfam12796  82 EKGADINVKD 91
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 35-188 4.92e-13

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 68.75  E-value: 4.92e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  35 DNVEDLIRGGADVNCT-HGTLKPLHCACMVSDADCVELLLE--------------------------KGAEVNALDGYNR 87
Cdd:PHA02878  51 DVVKSLLTRGHNVNQPdHRDLTPLHIICKEPNKLGMKEMIRsinkcsvfytlvaikdafnnrnveifKIILTNRYKNIQT 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  88 TALHYAAEKDE------ACVEVLLEYGANPNALDGNRD-TPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAM 160
Cdd:PHA02878 131 IDLVYIDKKSKddiieaEITKLLLSYGADINMKDRHKGnTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK 210

                        170       180
                 ....*....|....*....|....*...
gi 282398104 161 KGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:PHA02878 211 HYNKPIVHILLENGASTDARDKCGNTPL 238
Ank_2 pfam12796
Ankyrin repeats (3 copies);
122-188 7.51e-12

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 60.51  E-value: 7.51e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 282398104  122 LHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYgAEVRVINlKGQTPI 188
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEH-ADVNLKD-NGRTAL 65
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 25-188 8.63e-12

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 64.98  E-value: 8.63e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  25 TIAAIRSFPHDNVEDLIRGGADVNCTHGTLKP-LHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDE-ACVE 102
Cdd:PHA02874  95 SILPIPCIEKDMIKTILDCGIDVNIKDAELKTfLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFfDIIK 174

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 103 VLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGnlESVSILLDYGAEVRVINL 182
Cdd:PHA02874 175 LLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN--RSAIELLINNASINDQDI 252


                 ....*.
gi 282398104 183 KGQTPI 188
Cdd:PHA02874 253 DGSTPL 258
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 85-188 1.06e-11

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 64.69  E-value: 1.06e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  85 YNRTALHYAAEKD--EACVEVLLEYGANPNALDGNRDTPLHWAA-----FKNNAECVRALLESGASVNALDYNNDTPLSW 157
Cdd:PHA03100  33 KKPVLPLYLAKEArnIDVVKILLDNGADINSSTKNNSTPLHYLSnikynLTDVKEIVKLLLEYGANVNAPDNNGITPLLY 112

                         90       100       110
                 ....*....|....*....|....*....|...
gi 282398104 158 AAMK--GNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:PHA03100 113 AISKksNSYSIVEYLLDNGANVNIKNSDGENLL 145
Ank_4 pfam13637
Ankyrin repeats (many copies);
118-171 1.42e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 55.74  E-value: 1.42e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 282398104  118 RDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILL 171
Cdd:pfam13637   1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 91-176 1.49e-10

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 61.45  E-value: 1.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  91 HYAAEKDEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSIL 170
Cdd:PTZ00322  88 QLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167


                 ....*.
gi 282398104 171 LDYGAE 176
Cdd:PTZ00322 168 SRHSQC 173
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 52-213 2.29e-10

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 60.78  E-value: 2.29e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  52 GTLKPLHCACMVSDADCVELLLEKGAEVNAL---DGynRTALHYAAE-KDEACVEVLLEYGANPNALDGNRDTPLHWAAF 127
Cdd:PHA02875  67 DIESELHDAVEEGDVKAVEELLDLGKFADDVfykDG--MTPLHLATIlKKLDIMKLLIARGADPDIPNTDKFSPLHLAVM 144

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 128 KNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEvrvINLKGQTPIsrlVALLVRGLGTEKEDSC 207
Cdd:PHA02875 145 MGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGAN---IDYFGKNGC---VAALCYAIENNKIDIV 218


                 ....*.
gi 282398104 208 FELLHR 213
Cdd:PHA02875 219 RLFIKR 224
Ank_4 pfam13637
Ankyrin repeats (many copies);
86-138 3.80e-10

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 54.59  E-value: 3.80e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 282398104   86 NRTALHYAAEK-DEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALL 138
Cdd:pfam13637   1 ELTALHAAAASgHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
 51-192 3.99e-10

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 60.03  E-value: 3.99e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  51 HGTLKPLHCACMVSDADCVE-LLLEKGAEVNALDGYNRTALHYAA--EKDEACVeVLLEygANPNALD---------Gnr 118
Cdd:cd22192   15 RISESPLLLAAKENDVQAIKkLLKCPSCDLFQRGALGETALHVAAlyDNLEAAV-VLME--AAPELVNepmtsdlyqG-- 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 119 DTPLHWAAFKNNAECVRALLESGASVN--------------ALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKG 184
Cdd:cd22192   90 ETALHIAVVNQNLNLVRELIARGADVVspratgtffrpgpkNLIYYGEHPLSFAACVGNEEIVRLLIEHGADIRAQDSLG 169


                 ....*...
gi 282398104 185 QTPISRLV 192
Cdd:cd22192  170 NTVLHILV 177
SOCS_ASB_like cd03716
SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB ...
 245-286 2.68e-09

SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable number of repeats. SSB proteins contain a central SPRY domain and a C-terminal SOCS. Recently, it has been shown that all four SSB proteins interact with the MET, the receptor protein-tyrosine kinase for hepatocyte growth factor (HGF), and that SSB-1, SSB-2, and SSB-4 interact with prostate apoptosis response protein-4. Both types of interactions are mediated through the SPRY domain.


Pssm-ID: 239686  Cd Length: 42  Bit Score: 51.73  E-value: 2.68e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQyLPDAVKGLPLPVSLKDYLLL 286
Cdd:cd03716    1 STPRSLQHLCRLAIRRCLGRR-RLELIKKLPLPPRLKDYLLY 41
PHA02946 PHA02946
ankyin-like protein; Provisional
 97-177 3.91e-09

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 56.99  E-value: 3.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  97 DEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGN--LESVSILLDYG 174
Cdd:PHA02946  51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDevIERINLLVQYG 130


                 ...
gi 282398104 175 AEV 177
Cdd:PHA02946 131 AKI 133
SOCS cd03587
SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region ...
 247-286 1.68e-08

SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins with a SOCS box), and WSBs (WD40 repeat-containing proteins with a SOCS box), as well as, other miscellaneous proteins. The function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239641  Cd Length: 41  Bit Score: 49.39  E-value: 1.68e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 282398104 247 PGTLKTLARYAVRRSLGLQyLPDAVKGLPLPVSLKDYLLL 286
Cdd:cd03587    2 PRSLQHLCRLAIRRCLGKR-RLDLIDKLPLPPRLKDYLLY 40
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
 36-182 1.82e-08

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 55.26  E-value: 1.82e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  36 NVEDLI--RGGADVNCTHGTlkPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKD-EACVEVLLEYGANPN 112
Cdd:PLN03192 508 NVGDLLgdNGGEHDDPNMAS--NLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGyEDCVLVLLKHACNVH 585

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 113 ALDGNRDTPLhW--------------------------------AAFKNNAECVRALLESGASVNALDYNNDTPLSWAAM 160
Cdd:PLN03192 586 IRDANGNTAL-WnaisakhhkifrilyhfasisdphaagdllctAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMA 664

                        170       180
                 ....*....|....*....|..
gi 282398104 161 KGNLESVSILLDYGAEVRVINL 182
Cdd:PLN03192 665 EDHVDMVRLLIMNGADVDKANT 686
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 65-166 2.66e-08

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 54.52  E-value: 2.66e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  65 DADCVELLLEKGAEVNALDGYNRTALHYAAEKDE-ACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGAS 143
Cdd:PTZ00322  94 DAVGARILLTGGADPNCRDYDGRTPLHIACANGHvQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQC 173

                         90       100
                 ....*....|....*....|...
gi 282398104 144 VNALDYNNdTPLSWAAMKGNLES 166
Cdd:PTZ00322 174 HFELGANA-KPDSFTGKPPSLED 195
PHA03095 PHA03095
ankyrin-like protein; Provisional
 37-148 4.13e-08

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 53.88  E-value: 4.13e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVNCTH-GTLKPLHCACMVSDADC--VELLLEKGAEVNALDGYNRTALHYAA--EKDEACVEvLLEYGANP 111
Cdd:PHA03095 205 VRELIRAGCDPAATDmLGNTPLHSMATGSSCKRslVLPLLIAGISINARNRYGQTPLHYAAvfNNPRACRR-LIALGADI 283

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 282398104 112 NALDGNRDTPLHWAAFKNNAECVRALLESGASVNALD 148
Cdd:PHA03095 284 NAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVA 320
Ank_4 pfam13637
Ankyrin repeats (many copies);
56-105 4.41e-08

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 48.81  E-value: 4.41e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 282398104   56 PLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEK-DEACVEVLL 105
Cdd:pfam13637   4 ALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNgNVEVLKLLL 54
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 134-188 4.79e-08

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 53.75  E-value: 4.79e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282398104 134 VRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:PTZ00322  98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPL 152
SOCS_box pfam07525
SOCS box; The SOCS box acts as a bridge between specific substrate- binding domains and more ...
 247-285 1.39e-07

SOCS box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases.


Pssm-ID: 462192  Cd Length: 39  Bit Score: 46.77  E-value: 1.39e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 282398104  247 PGTLKTLARYAVRRSLGlQYLPDAVKGLPLPVSLKDYLL 285
Cdd:pfam07525   2 PRSLQHLCRLAIRRALG-KRRLGAIDKLPLPPLLKDYLL 39
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 97-186 1.70e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 52.37  E-value: 1.70e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  97 DEACVEVLLEyganpnALDGNRdtpLHWAAFKNNAECVRA---------------LLESGASVNALDYNNDTPLSWAAMK 161
Cdd:PHA02876 118 DEACIHILKE------AISGND---IHYDKINESIEYMKLikeriqqdelliaemLLEGGADVNAKDIYCITPIHYAAER 188

                         90       100
                 ....*....|....*....|....*
gi 282398104 162 GNLESVSILLDYGAEVRVINLKGQT 186
Cdd:PHA02876 189 GNAKMVNLLLSYGADVNIIALDDLS 213
trp TIGR00870
transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ ...
 67-178 1.74e-07

transient-receptor-potential calcium channel protein; The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999). [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273311 [Multi-domain]  Cd Length: 743  Bit Score: 52.01  E-value: 1.74e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   67 DCVELLLEKGAEVNALDgynrTALHYAAEKDEACVEVLL--------EYGANPNALDGNRD------TPLHWAAFKNNAE 132
Cdd:TIGR00870  67 ELTELLLNLSCRGAVGD----TLLHAISLEYVDAVEAILlhllaafrKSGPLELANDQYTSeftpgiTALHLAAHRQNYE 142

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  133 CVRALLESGASVNA--------------LDYNNDTPLSWAAMKGNLESVSILLDYGAEVR 178
Cdd:TIGR00870 143 IVKLLLERGASVPAracgdffvksqgvdSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202
Ank_5 pfam13857
Ankyrin repeats (many copies);
104-155 1.96e-07

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 46.96  E-value: 1.96e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 282398104  104 LLEYG-ANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPL 155
Cdd:pfam13857   1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTAL 53
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 40-122 4.60e-07

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 50.67  E-value: 4.60e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  40 LIRGGADVNCT--HGTlKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEVLL--------EYGA 109
Cdd:PTZ00322 101 LLTGGADPNCRdyDGR-TPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLsrhsqchfELGA 179

                         90
                 ....*....|....*....
gi 282398104 110 N--PNALDGN----RDTPL 122
Cdd:PTZ00322 180 NakPDSFTGKppslEDSPI 198
PHA02884 PHA02884
ankyrin repeat protein; Provisional
 101-188 7.83e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 49.60  E-value: 7.83e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 101 VEVLLEYGANPNA----LDGNRDTPLHWAAFKNNAECVRALLESGASVNAL-DYNNDTPLSWAAMKGNLESVSILLDYGA 175
Cdd:PHA02884  49 IDAILKLGADPEApfplSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYaEEAKITPLYISVLHGCLKCLEILLSYGA 128

                         90
                 ....*....|...
gi 282398104 176 EVRVINLKGQTPI 188
Cdd:PHA02884 129 DINIQTNDMVTPI 141
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 95-172 8.49e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 50.06  E-value: 8.49e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 282398104  95 EKDEACV-EVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLD 172
Cdd:PHA02876 154 QQDELLIaEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIID 232
PHA02859 PHA02859
ankyrin repeat protein; Provisional
 69-188 1.49e-06

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 47.89  E-value: 1.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  69 VELLLEKGAEVN-ALDGYNRTALH----YAAEKDEACVEVLLEYGANPNALDGNRDTPLH--WAAFKNNAECVRALLESG 141
Cdd:PHA02859  69 LKFLIENGADVNfKTRDNNLSALHhylsFNKNVEPEILKILIDSGSSITEEDEDGKNLLHmyMCNFNVRINVIKLLIDSG 148

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282398104 142 ASVNALDYNNDTPL-SWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:PHA02859 149 VSFLNKDFDNNNILySYILFHSDKKIFDFLTSLGIDINETNKSGYNCY 196
TRPV cd21882
Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily ...
 87-192 1.95e-06

Transient Receptor Potential channel, Vanilloid subfamily (TRPV); The vanilloid TRP subfamily (TRPV), named after the vanilloid receptor 1 (TRPV1), consists of six members: four thermo-sensing channels (TRPV1, TRPV2, TRPV3, and TRPV4) and two Ca2+ selective channels (TRPV5 and TRPV6). The calcium-selective channels TRPV5 and TRPV6 can be heterotetramers and are important for general Ca2+ homeostasis. All four channels within the TRPV1-4 group show temperature-invoked currents when expressed in heterologous cell systems, ranging from activation at ~25C for TRPV4 to ~52C for TRPV2. The structure of TRPV shows the typical topology features of all Transient Receptor Potential (TRP) ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains. The TRP family consists of membrane proteins that function as ion channels that communicate between the cell and its environment, by a vast array of physical or chemical stimuli, including radiation (in the form of temperature, infrared ,or light) and pressure (osmotic or mechanical). TRP channels are formed by a tetrameric complex of channel subunits. Based on sequence identity, the mammalian TRP channel family is classified into six subfamilies, with significant sequence similarity within the transmembrane domains, but very low similarity in their N- and C-terminal cytoplasmic regions. The six subfamilies are named based on their first member: TRPC (canonical), TRPV (vanilloid), TRPM (melastatin), TRPA (ankyrin), TRPML (mucolipin), and TRPP (polycystic).


Pssm-ID: 411975 [Multi-domain]  Cd Length: 600  Bit Score: 48.72  E-value: 1.95e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  87 RTALHYAAEKDE----ACVEVLLEYG---------ANPNALDG--NRDTPLHWAAFKNNAECVRALLESGASVNA----- 146
Cdd:cd21882   27 KTCLHKAALNLNdgvnEAIMLLLEAApdsgnpkelVNAPCTDEfyQGQTALHIAIENRNLNLVRLLVENGADVSAratgr 106

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 282398104 147 --------LDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLK---GQTPISRLV 192
Cdd:cd21882  107 ffrkspgnLFYFGELPLSLAACTNQEEIVRLLLENGAQPAALEAQdslGNTVLHALV 163
PHA02946 PHA02946
ankyin-like protein; Provisional
 8-195 3.42e-06

ankyin-like protein; Provisional


Pssm-ID: 165256 [Multi-domain]  Cd Length: 446  Bit Score: 48.13  E-value: 3.42e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104   8 IMQSIQSkySLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLK-PLHCACMVSDADCVELLLEKGAEVNALDGYN 86
Cdd:PHA02946  28 MLQAIEP--SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNyPLHIASKINNNRIVAMLLTHGADPNACDKQH 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  87 RTALHYAAEKDEACVE---VLLEYGAN-PNALDGNRDTPL----------------------------------HWAAFK 128
Cdd:PHA02946 106 KTPLYYLSGTDDEVIErinLLVQYGAKiNNSVDEEGCGPLlactdpservfkkimsigfearivdkfgknhihrHLMSDN 185

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 282398104 129 NNAECVRALLESGASVNALDYNNDTPLSWAAMK--GNLESVSILLDyGAEVRVINLKGQTPISRLVALL 195
Cdd:PHA02946 186 PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKtvKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTL 253
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 117-146 4.80e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 42.57  E-value: 4.80e-06
                           10        20        30
                   ....*....|....*....|....*....|
gi 282398104   117 NRDTPLHWAAFKNNAECVRALLESGASVNA 146
Cdd:smart00248   1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
PHA02741 PHA02741
hypothetical protein; Provisional
 67-178 4.84e-06

hypothetical protein; Provisional


Pssm-ID: 165108 [Multi-domain]  Cd Length: 169  Bit Score: 45.80  E-value: 4.84e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  67 DCVELLLekgaevNALDGYNRTALHYAAEKDEA-----CVEVLLEYGANPNALDG-NRDTPLHWAAFKNNAECVRALL-E 139
Cdd:PHA02741  47 DCHAAAL------NATDDAGQMCIHIAAEKHEAqlaaeIIDHLIELGADINAQEMlEGDTALHLAAHRRDHDLAEWLCcQ 120

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 282398104 140 SGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVR 178
Cdd:PHA02741 121 PGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATSR 159
PHA02798 PHA02798
ankyrin-like protein; Provisional
 67-181 5.45e-06

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 47.52  E-value: 5.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  67 DCVELLLEKGAEVNALDGYNRTAL--------HYAAEKDeaCVEVLLEYGANPNALDGNRDTPLHWA---AFKNNAECVR 135
Cdd:PHA02798  52 DIVKLFINLGANVNGLDNEYSTPLctilsnikDYKHMLD--IVKILIENGADINKKNSDGETPLYCLlsnGYINNLEILL 129

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 282398104 136 ALLESGASVNALDYNNDTPLSWAAMKGN---LESVSILLDYGAEVRVIN 181
Cdd:PHA02798 130 FMIENGADTTLLDKDGFTMLQVYLQSNHhidIEIIKLLLEKGVDINTHN 178
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 96-188 7.63e-06

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 46.91  E-value: 7.63e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  96 KDEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNN-DTPLSWAAMKGNLESVSILLDYG 174
Cdd:PHA02875  46 RDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDgMTPLHLATILKKLDIMKLLIARG 125

                         90
                 ....*....|....
gi 282398104 175 AEVRVINLKGQTPI 188
Cdd:PHA02875 126 ADPDIPNTDKFSPL 139
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 117-148 8.03e-06

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 459634 [Multi-domain]  Cd Length: 34  Bit Score: 41.89  E-value: 8.03e-06
                          10        20        30
                  ....*....|....*....|....*....|...
gi 282398104  117 NRDTPLHWAAFK-NNAECVRALLESGASVNALD 148
Cdd:pfam00023   1 DGNTPLHLAAGRrGNLEIVKLLLSKGADVNARD 33
Ank_5 pfam13857
Ankyrin repeats (many copies);
71-125 8.15e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 42.33  E-value: 8.15e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 282398104   71 LLLEKGAEVNALDGYNRTALHYAAEKDEA-CVEVLLEYGANPNALDGNRDTPLHWA 125
Cdd:pfam13857   1 LLEHGPIDLNRLDGEGYTPLHVAAKYGALeIVRVLLAYGVDLNLKDEEGLTALDLA 56
PHA02798 PHA02798
ankyrin-like protein; Provisional
 101-186 1.40e-05

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 45.98  E-value: 1.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 101 VEVLLEYGANPNALDGNRDTPL-----HWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKG---NLESVSILLD 172
Cdd:PHA02798  54 VKLFINLGANVNGLDNEYSTPLctilsNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGyinNLEILLFMIE 133

                         90
                 ....*....|....
gi 282398104 173 YGAEVRVINLKGQT 186
Cdd:PHA02798 134 NGADTTLLDKDGFT 147
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
 63-160 1.63e-05

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 46.01  E-value: 1.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  63 VSDADCVELLLEKGAE-VNALDGYNrtALHYAAEKDEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESG 141
Cdd:PLN03192 504 LHDLNVGDLLGDNGGEhDDPNMASN--LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA 581

                         90
                 ....*....|....*....
gi 282398104 142 ASVNALDYNNDTPLsWAAM 160
Cdd:PLN03192 582 CNVHIRDANGNTAL-WNAI 599
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 85-115 4.11e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 459634 [Multi-domain]  Cd Length: 34  Bit Score: 39.97  E-value: 4.11e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 282398104   85 YNRTALHYAAEK--DEACVEVLLEYGANPNALD 115
Cdd:pfam00023   1 DGNTPLHLAAGRrgNLEIVKLLLSKGADVNARD 33
SOCS_box smart00969
The SOCS box acts as a bridge between specific substrate- binding domains and more generic ...
 249-286 6.02e-05

The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases;


Pssm-ID: 198037  Cd Length: 34  Bit Score: 39.31  E-value: 6.02e-05
                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 282398104   249 TLKTLARYAVRRSLGlqylpdAVKGLPLPVSLKDYLLL 286
Cdd:smart00969   2 SLQHLCRLAIRRSLG------GIDKLPLPPRLKDYLLY 33
PHA02736 PHA02736
Viral ankyrin protein; Provisional
 57-179 7.98e-05

Viral ankyrin protein; Provisional


Pssm-ID: 165103 [Multi-domain]  Cd Length: 154  Bit Score: 42.17  E-value: 7.98e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  57 LHCACmvSDADCVELLLEKGAEVNA----LDGYNRTA---LHYAAEKDEA----CVEVLLEYGANPNALDG-NRDTPLHW 124
Cdd:PHA02736  21 LHYLC--RNGGVTDLLAFKNAISDEnrylVLEYNRHGkqcVHIVSNPDKAdpqeKLKLLMEWGADINGKERvFGNTPLHI 98

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 282398104 125 AAFKNNAECVRALL-ESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRV 179
Cdd:PHA02736  99 AVYTQNYELATWLCnQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCKV 154
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
 56-165 9.70e-05

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 43.46  E-value: 9.70e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  56 PLHCACMVSDADCVELLLEKGAEVN--------------ALDGYNRTALHYAA-EKDEACVEVLLEYGANPNALDGNRDT 120
Cdd:cd22192   92 ALHIAVVNQNLNLVRELIARGADVVspratgtffrpgpkNLIYYGEHPLSFAAcVGNEEIVRLLIEHGADIRAQDSLGNT 171

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 282398104 121 PLHWAAFKNNAECVRALLESGASVNALDY--------NND--TPLSWAAMKGNLE 165
Cdd:cd22192  172 VLHILVLQPNKTFACQMYDLILSYDKEDDlqpldlvpNNQglTPFKLAAKEGNIV 226
Ank_2 pfam12796
Ankyrin repeats (3 copies);
26-83 1.53e-04

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 39.71  E-value: 1.53e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 282398104   26 IAAIRSFPHDNVEDLIRGgADVNCTHGTLKPLHCACMVSDADCVELLLEKGAEVNALD 83
Cdd:pfam12796  35 HLAAKNGHLEIVKLLLEH-ADVNLKDNGRTALHYAARSGHLEIVKLLLEKGADINVKD 91
SOCS_ASB15 cd03731
SOCS (suppressors of cytokine signaling) box of ASB15-like proteins. ASB family members have a ...
 247-288 1.62e-04

SOCS (suppressors of cytokine signaling) box of ASB15-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Human ASB15 is expressed predominantly in skeletal muscle and participates in the regulation of protein turnover and muscle cell development by stimulating protein synthesis and regulating differentiation of muscle cells. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239701  Cd Length: 56  Bit Score: 38.66  E-value: 1.62e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 282398104 247 PGTLKTLARYAVRRSLGLQYL--PDAVKGLPLPVSLKDYLLLLE 288
Cdd:cd03731    3 PRPLKHLCRLKIRKLMGLQKLqqPSSMKKLPLPPALKRYILYKE 46
SOCS_SSB1_4 cd03718
SOCS (suppressors of cytokine signaling) box of SSB1 and SSB4 (SPRY domain-containing SOCS box ...
 246-285 2.46e-04

SOCS (suppressors of cytokine signaling) box of SSB1 and SSB4 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB1 and SSB4 has been shown to bind to MET, the receptor protein-tyrosine kinase for hepatocyte growth factor (HGF) and also interacts with prostate apoptosis response protein-4. Both types of interactions are mediated through the SPRY domain. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239688  Cd Length: 42  Bit Score: 38.05  E-value: 2.46e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 282398104 246 APGTLKTLARYAVRRSLGLQYLPDaVKGLPLPVSLKDYLL 285
Cdd:cd03718    2 EPLPLMDLCRRRVRVALGRDRLEE-IEQLPLPPSLKNYLL 40
PHA02859 PHA02859
ankyrin repeat protein; Provisional
 79-155 3.74e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 40.96  E-value: 3.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  79 VNALDGYNRTALHYAAEKDEACVEV---LLEYGANPN-ALDGNRDTPLHWAAFKN---NAECVRALLESGASVNALDYNN 151
Cdd:PHA02859  44 VNDCNDLYETPIFSCLEKDKVNVEIlkfLIENGADVNfKTRDNNLSALHHYLSFNknvEPEILKILIDSGSSITEEDEDG 123


                 ....
gi 282398104 152 DTPL 155
Cdd:PHA02859 124 KNLL 127
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 56-83 3.83e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 459634 [Multi-domain]  Cd Length: 34  Bit Score: 37.27  E-value: 3.83e-04
                          10        20
                  ....*....|....*....|....*....
gi 282398104   56 PLHCAC-MVSDADCVELLLEKGAEVNALD 83
Cdd:pfam00023   5 PLHLAAgRRGNLEIVKLLLSKGADVNARD 33
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 56-81 4.32e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.80  E-value: 4.32e-04
                           10        20
                   ....*....|....*....|....*.
gi 282398104    56 PLHCACMVSDADCVELLLEKGAEVNA 81
Cdd:smart00248   5 PLHLAAENGNLEVVKLLLDKGADINA 30
Ank_5 pfam13857
Ankyrin repeats (many copies);
42-93 4.40e-04

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 37.71  E-value: 4.40e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 282398104   42 RGGADVNCTHG-TLKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHYA 93
Cdd:pfam13857   4 HGPIDLNRLDGeGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 85-113 5.31e-04

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 36.80  E-value: 5.31e-04
                           10        20        30
                   ....*....|....*....|....*....|
gi 282398104    85 YNRTALHYAAEK-DEACVEVLLEYGANPNA 113
Cdd:smart00248   1 DGRTPLHLAAENgNLEVVKLLLDKGADINA 30
PHA02859 PHA02859
ankyrin repeat protein; Provisional
 37-150 6.52e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165195 [Multi-domain]  Cd Length: 209  Bit Score: 40.19  E-value: 6.52e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVNCT--HGTLKPLHCACMVS---DADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEV---LLEYG 108
Cdd:PHA02859  69 LKFLIENGADVNFKtrDNNLSALHHYLSFNknvEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINViklLIDSG 148

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 282398104 109 ANPNALDGNRDTPLH-WAAFKNNAECVRALLESGasvnaLDYN 150
Cdd:PHA02859 149 VSFLNKDFDNNNILYsYILFHSDKKIFDFLTSLG-----IDIN 186
PHA02884 PHA02884
ankyrin repeat protein; Provisional
 67-160 7.33e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 40.35  E-value: 7.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  67 DCVELLLEKGAEVNA-----LDGYNrTALHYAAEKD-EACVEVLLEYGANPNALDGN-RDTPLHWAAFKNNAECVRALLE 139
Cdd:PHA02884  47 DIIDAILKLGADPEApfplsENSKT-NPLIYAIDCDnDDAAKLLIRYGADVNRYAEEaKITPLYISVLHGCLKCLEILLS 125

                         90       100
                 ....*....|....*....|.
gi 282398104 140 SGASVNALDYNNDTPLSWAAM 160
Cdd:PHA02884 126 YGADINIQTNDMVTPIELALM 146
PHA02791 PHA02791
ankyrin-like protein; Provisional
 83-171 8.00e-04

ankyrin-like protein; Provisional


Pssm-ID: 165154 [Multi-domain]  Cd Length: 284  Bit Score: 40.41  E-value: 8.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  83 DGYNRTALHYA-AEKDEACVEVLLEYGANPNALDGnrDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMK 161
Cdd:PHA02791  27 DVHGHSALYYAiADNNVRLVCTLLNAGALKNLLEN--EFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS 104

                         90
                 ....*....|
gi 282398104 162 GNLESVSILL 171
Cdd:PHA02791 105 GNMQTVKLFV 114
SOCS_ASB4_ASB18 cd03723
SOCS (suppressors of cytokine signaling) box of ASB4 and ASB18 proteins. ASB family members ...
 247-286 8.66e-04

SOCS (suppressors of cytokine signaling) box of ASB4 and ASB18 proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Asb4 was identified as imprinted gene in mice. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239693  Cd Length: 48  Bit Score: 36.65  E-value: 8.66e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 282398104 247 PGTLKTLARYAVRRSLGlQYLPDAVKGLPLPVSLKDYLLL 286
Cdd:cd03723    3 PRSLQHLCRCAIRKLLG-SRCHKLVPQLSLPTSLKNYLLL 41
SOCS_ASB6 cd03725
SOCS (suppressors of cytokine signaling) box of ASB6-like proteins. ASB family members have a ...
 245-285 9.62e-04

SOCS (suppressors of cytokine signaling) box of ASB6-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. ASB6 interacts with the adaptor protein APS and recruits elongin B/C to the insulin receptor signaling complex. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239695  Cd Length: 44  Bit Score: 36.27  E-value: 9.62e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPVSLKDYLL 285
Cdd:cd03725    1 SYPPPLKHLCRVFIRLCLRPWPVDVKVKALPLPDRLKWYLL 41
Ank_4 pfam13637
Ankyrin repeats (many copies);
151-188 1.00e-03

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 36.48  E-value: 1.00e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 282398104  151 NDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:pfam13637   1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETAL 38
SOCS_SOCS_like cd03717
SOCS (suppressors of cytokine signaling) box of SOCS-like proteins. The CIS/SOCS family of ...
 249-285 1.01e-03

SOCS (suppressors of cytokine signaling) box of SOCS-like proteins. The CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. These intracellular proteins regulate the responses of immune cells to cytokines. Identified as negative regulators of the cytokine-JAK-STAT pathway, they seem to play a role in many immunological and pathological processes. The function of the SOCS box is the recruitment of the ubiquitin-transferase system. Related SOCS boxes are also present in Rab40-like proteins and insect proteins of unknown function that also contain a NEUZ (domain in neuralized proteins) domain.


Pssm-ID: 239687  Cd Length: 39  Bit Score: 36.04  E-value: 1.01e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 282398104 249 TLKTLARYAVRRSLGLqylpDAVKGLPLPVSLKDYLL 285
Cdd:cd03717    5 SLQHLCRFVIRQCTRR----DLIDQLPLPRRLKDYLK 37
SOCS_SSB4 cd03743
SOCS (suppressors of cytokine signaling) box of SSB4 (SPRY domain-containing SOCS box ...
 247-284 1.21e-03

SOCS (suppressors of cytokine signaling) box of SSB4 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB4 has been shown to bind to MET, the receptor protein-tyrosine kinase for hepatocyte growth factor (HGF). SSB4, like SSB2 and SSB1, also interacts with prostate apoptosis response protein-4. Both types of interactions are mediated through the SPRY domain. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239712  Cd Length: 42  Bit Score: 36.09  E-value: 1.21e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 282398104 247 PGTLKTLARYAVRRSLGLQYLPDaVKGLPLPVSLKDYL 284
Cdd:cd03743    3 PLPLMDLCRRSARQALGRHRLHH-IQSLPLPQTLKNYL 39
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 120-146 1.68e-03

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 463933 [Multi-domain]  Cd Length: 30  Bit Score: 35.31  E-value: 1.68e-03
                          10        20
                  ....*....|....*....|....*..
gi 282398104  120 TPLHWAAFKNNAECVRALLESGASVNA 146
Cdd:pfam13606   4 TPLHLAARNGRLEIVKLLLENGADINA 30
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 150-177 1.71e-03

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 35.26  E-value: 1.71e-03
                           10        20
                   ....*....|....*....|....*...
gi 282398104   150 NNDTPLSWAAMKGNLESVSILLDYGAEV 177
Cdd:smart00248   1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
SOCS_SSB1 cd03744
SOCS (suppressors of cytokine signaling) box of SSB1 (SPRY domain-containing SOCS box proteins) ...
 247-285 3.16e-03

SOCS (suppressors of cytokine signaling) box of SSB1 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB1 has been shown to bind to MET, the receptor protein-tyrosine kinase for hepatocyte growth factor (HGF), both the absence and the presence of HGF and enhances the HGF-MET-induced mitogen-activated protein kinases Erk-transcription factor Elk-1-serum response elements (SRE) pathway. SSB1, like SSB2 and SSB4, also interacts with prostate apoptosis response protein-4. Both types of interactions are mediated through the SPRY domain. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239713  Cd Length: 42  Bit Score: 34.96  E-value: 3.16e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 282398104 247 PGTLKTLARYAVRRSLGLQYLPDaVKGLPLPVSLKDYLL 285
Cdd:cd03744    3 PLPLMDLCRRSVRLALGRERLSE-IHTLPLPASLKNYLL 40
Ank_5 pfam13857
Ankyrin repeats (many copies);
137-188 5.59e-03

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 34.63  E-value: 5.59e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 282398104  137 LLESG-ASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLKGQTPI 188
Cdd:pfam13857   1 LLEHGpIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTAL 53
PHA02884 PHA02884
ankyrin repeat protein; Provisional
 12-80 6.23e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165212 [Multi-domain]  Cd Length: 300  Bit Score: 37.66  E-value: 6.23e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 282398104  12 IQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLK--PLHCACMVSDADCVELLLEKGAEVN 80
Cdd:PHA02884  61 APFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKitPLYISVLHGCLKCLEILLSYGADIN 131
SOCS_ASB1 cd03720
SOCS (suppressors of cytokine signaling) box of ASB1-like proteins. ASB family members have a ...
 245-285 8.53e-03

SOCS (suppressors of cytokine signaling) box of ASB1-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. The SOCS box interacts with Elongins B and C, Cullin-5 or Cullin-2, Rbx-1, and E2. Therefore, SOCS-box-containing proteins probably function as E3 ubiquitin ligases and mediate the degradation of proteins associated through their N-terminal regions.


Pssm-ID: 239690  Cd Length: 42  Bit Score: 33.55  E-value: 8.53e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 282398104 245 SAPGTLKTLARYAVRRSLGLQYLpDAVKGLPLPVSLKDYLL 285
Cdd:cd03720    1 GNPRSLLSLCRIAVRRALGKQRL-SLICSLPLPDPIKKFLL 40
TRPV5-6 cd22192
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and ...
 37-132 8.92e-03

Transient Receptor Potential channel, Vanilloid subfamily (TRPV), types 5 and 6; TRPV5 and TRPV6 (TRPV5/6) are two homologous members within the vanilloid subfamily of the transient receptor potential (TRP) family. TRPV5 and TRPV6 show only 30-40% homology with other members of the TRP family and have unique properties that differentiates them from other TRP channels. They mediate calcium uptake in epithelia and their expression is dramatically increased in numerous types of cancer. The structure of TRPV5/6 shows the typical topology features of all TRP family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6, which is predicted to form the Ca2+ pore, and large intracellular N- and C-terminal domains. The N-terminal domain of TRPV5/6 contains three ankyrin repeats. This structural element is present in several proteins and plays a role in protein-protein interactions. The N- and C-terminal tails of TRPV5/6 each contain an internal PDZ motif which can function as part of a molecular scaffold via interaction with PDZ-domain containing proteins. A major difference between the properties of TRPV5 and TRPV6 is in their tissue distribution: TRPV5 is predominantly expressed in the distal convoluted tubules (DCT) and connecting tubules (CNT) of the kidney, with limited expression in extrarenal tissues. In contrast, TRPV6 has a broader expression pattern such as expression in the intestine, kidney, placenta, epididymis, exocrine tissues, and a few other tissues.


Pssm-ID: 411976 [Multi-domain]  Cd Length: 609  Bit Score: 37.30  E-value: 8.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104  37 VEDLIRGGADVN----------------CTHGTlKPLHCACMVSDADCVELLLEKGAEVNALDGYNRTALHY---AAEKD 97
Cdd:cd22192  105 VRELIARGADVVspratgtffrpgpknlIYYGE-HPLSFAACVGNEEIVRLLIEHGADIRAQDSLGNTVLHIlvlQPNKT 183

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 282398104  98 EAC--VEVLLEYGA--NPNALD--GNRD--TPLHWAAFKNNAE 132
Cdd:cd22192  184 FACqmYDLILSYDKedDLQPLDlvPNNQglTPFKLAAKEGNIV 226
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 104-188 9.47e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 37.28  E-value: 9.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398104 104 LLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVR-VINL 182
Cdd:PHA02875  21 LLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADdVFYK 100


                 ....*.
gi 282398104 183 KGQTPI 188
Cdd:PHA02875 101 DGMTPL 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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