|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG2 |
cd23465 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1381-1516 |
7.40e-87 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 2 (CRYBG2) and similar proteins; CRYBG2, also called absent in melanoma 1-like protein (AIM1L), is a beta/gamma-crystallin family protein with a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
:
Pssm-ID: 467343 Cd Length: 136 Bit Score: 278.68 E-value: 7.40e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1381 QRRAYFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCIWYYEDGLLKNQMAPTMSLQVIGPPSPGSKVVLWAESR 1460
Cdd:cd23465 1 QRRVYFRLRNRELGLYLAVPDGVEDMKAGRVVVTEQQEGMSHVWFYEDGLLKNQMAPTMSLQVIGPPDNGAKVVLWSETR 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 244790065 1461 LPRQTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHVL 1516
Cdd:cd23465 81 QPRQTWSIQPSGHILSQMFEGMILDVKGGRTYDRDHVVLWEVSEERPSQIWDMEVL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1024-1110 |
2.16e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
:
Pssm-ID: 459639 Cd Length: 82 Bit Score: 123.76 E-value: 2.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1024 KAVVYEAPGFQGQSWEVSRDIYNLQQPEDSqspqlTSVGSLRILGGCWVGYEKEGFRGHQYLLEEGEYADWSNWGGYDEL 1103
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFN-----SRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDR 75
|
....*..
gi 244790065 1104 LTSLRVI 1110
Cdd:pfam00030 76 IGSLRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1119-1199 |
1.57e-31 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
:
Pssm-ID: 459639 Cd Length: 82 Bit Score: 118.37 E-value: 1.57e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1119 VVLFEDMDFQGHRVEVSSALPDVELAQHGPSTQAIHVLSGVWVAYERVGFSGEQFILEKGVYRNCDDWGSGNCALGSLQP 1198
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLRP 81
|
.
gi 244790065 1199 V 1199
Cdd:pfam00030 82 I 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1299-1379 |
3.41e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
:
Pssm-ID: 459639 Cd Length: 82 Bit Score: 100.26 E-value: 3.41e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1299 SLSLFGLECFEGKEIELTGEVRSLQAEGFNNHVLSVRVKGGVWVVCEHSDFRGRQWLVGSCEITNWLTYSG-TQRVGSLY 1377
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLR 80
|
..
gi 244790065 1378 PI 1379
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
929-1010 |
8.30e-23 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
:
Pssm-ID: 459639 Cd Length: 82 Bit Score: 93.71 E-value: 8.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 929 RISLFSEEGLKGKPVTLTGDLKDSQGLERPLQVASATVTAGLWLLYPKPFFEDTPYILEPGEYPTLEAWGTSGPSVGSLK 1008
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 244790065 1009 PM 1010
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1212-1291 |
2.71e-20 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
:
Pssm-ID: 459639 Cd Length: 82 Bit Score: 86.39 E-value: 2.71e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1212 KIQLFSGPNFLGDHISFEDDQASLPASFHP---QSCRVHGGSWVLFEDKNFEADQHIVSEGEFPTLTAMGCLASTVlGSL 1288
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNsrvNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRI-GSL 79
|
...
gi 244790065 1289 RKV 1291
Cdd:pfam00030 80 RPI 82
|
|
| Crystall super family |
cl02528 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
842-920 |
3.73e-10 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
The actual alignment was detected with superfamily member smart00247:
Pssm-ID: 470604 Cd Length: 82 Bit Score: 57.52 E-value: 3.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 842 KVILFSEPGCRGRGREVWGDIADASA---WDPVASIRVIRGCWILYEQPEFRGQKLSLPEGDVeLRALACAWSLQGFGSL 918
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDygsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEY-PDYQEWGGFNDQISSI 79
|
..
gi 244790065 919 RR 920
Cdd:smart00247 80 RR 81
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
354-607 |
1.51e-07 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 354 SSSPKPQTCAASLTQSPEQPVVPAHLEAQSTPhVLPAvkekftGLSTVPVPPTAKGEVTVPEPPPSPSSPRRKAAPSSQS 433
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGP-ATPG------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 434 PCAPASPKSKFVPDPENVPSSALTQKEVYPCPSVPAHSHIPKEVLQAHGAPKTSSSRPTTVVQN---AEGGPSIKKEVGQ 510
Cdd:PHA03247 2790 SLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGgsvAPGGDVRRRPPSR 2869
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 511 YPQNSPSPCSVP-----CKETVESPTFPAPLPPKQDEVVRDSPgnflsSPTPKGSFQSPPFAPSSSEAKESLSLEGSP-A 584
Cdd:PHA03247 2870 SPAAKPAAPARPpvrrlARPAVSRSTESFALPPDQPERPPQPQ-----APPPPQPQPQPPPPPQPQPPPPPPPRPQPPlA 2944
|
250 260
....*....|....*....|...
gi 244790065 585 SKPMGAEVSTGSQTIPDSTEGKV 607
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGAL 2967
|
|
| PHA03378 super family |
cl33729 |
EBNA-3B; Provisional |
726-858 |
2.30e-04 |
|
EBNA-3B; Provisional
The actual alignment was detected with superfamily member PHA03378:
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 726 PTPAKVTCSPMEMMKKLIAGQGPEPQPSNRPTSRLGgsllfgnlvPANKDAPALEPLGTKLSALPPHGAPGVKKVPGQLP 805
Cdd:PHA03378 701 PTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARP---------PAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAP 771
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 244790065 806 LLCSGRPPPE-KPAPIEPPEGwSPAPKTQGKLNTRPGKVILFSEPGCRGRGREV 858
Cdd:PHA03378 772 GAPTPQPPPQaPPAPQQRPRG-APTPQPPPQAGPTSMQLMPRAAPGQQGPTKQI 824
|
|
| PRK11901 super family |
cl36081 |
hypothetical protein; Reviewed |
262-439 |
4.18e-03 |
|
hypothetical protein; Reviewed
The actual alignment was detected with superfamily member PRK11901:
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 41.21 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 262 TSRGSGPGGTVGTTLGQPLEISTTELKNSISALAPvgvPAVDSPAQNIDIPvahpirdqGGVSDARTEESSRLQGASSVL 341
Cdd:PRK11901 99 NNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAP---PQTPNGQQRIELP--------GNISDALSQQQGQVNAASQNA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 342 LLNQTSQSQVPASSSPKPQTCAASLTQSPEQPVVPAhleAQSTPHVLPAVKekftglSTVPVPPTAKGEVTvpepppsps 421
Cdd:PRK11901 168 QGNTSTLPTAPATVAPSKGAKVPATAETHPTPPQKP---ATKKPAVNHHKT------ATVAVPPATSGKPK--------- 229
|
170
....*....|....*...
gi 244790065 422 sPRRKAAPSSQSpcAPAS 439
Cdd:PRK11901 230 -SGAASARALSS--APAS 244
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG2 |
cd23465 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1381-1516 |
7.40e-87 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 2 (CRYBG2) and similar proteins; CRYBG2, also called absent in melanoma 1-like protein (AIM1L), is a beta/gamma-crystallin family protein with a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467343 Cd Length: 136 Bit Score: 278.68 E-value: 7.40e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1381 QRRAYFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCIWYYEDGLLKNQMAPTMSLQVIGPPSPGSKVVLWAESR 1460
Cdd:cd23465 1 QRRVYFRLRNRELGLYLAVPDGVEDMKAGRVVVTEQQEGMSHVWFYEDGLLKNQMAPTMSLQVIGPPDNGAKVVLWSETR 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 244790065 1461 LPRQTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHVL 1516
Cdd:cd23465 81 QPRQTWSIQPSGHILSQMFEGMILDVKGGRTYDRDHVVLWEVSEERPSQIWDMEVL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1024-1110 |
2.16e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 123.76 E-value: 2.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1024 KAVVYEAPGFQGQSWEVSRDIYNLQQPEDSqspqlTSVGSLRILGGCWVGYEKEGFRGHQYLLEEGEYADWSNWGGYDEL 1103
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFN-----SRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDR 75
|
....*..
gi 244790065 1104 LTSLRVI 1110
Cdd:pfam00030 76 IGSLRPI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1119-1199 |
1.57e-31 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 118.37 E-value: 1.57e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1119 VVLFEDMDFQGHRVEVSSALPDVELAQHGPSTQAIHVLSGVWVAYERVGFSGEQFILEKGVYRNCDDWGSGNCALGSLQP 1198
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLRP 81
|
.
gi 244790065 1199 V 1199
Cdd:pfam00030 82 I 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1024-1110 |
1.06e-25 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 101.82 E-value: 1.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1024 KAVVYEAPGFQGQSWEVSRDIYNLQqPEDSQSpqltSVGSLRILGGCWVGYEKEGFRGHQYLLEEGEYADWSNWGGYDEL 1103
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQ-DYGSRD----NVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQ 75
|
....*..
gi 244790065 1104 LTSLRVI 1110
Cdd:smart00247 76 ISSIRRI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1299-1379 |
3.41e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 100.26 E-value: 3.41e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1299 SLSLFGLECFEGKEIELTGEVRSLQAEGFNNHVLSVRVKGGVWVVCEHSDFRGRQWLVGSCEITNWLTYSG-TQRVGSLY 1377
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLR 80
|
..
gi 244790065 1378 PI 1379
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
929-1010 |
8.30e-23 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 93.71 E-value: 8.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 929 RISLFSEEGLKGKPVTLTGDLKDSQGLERPLQVASATVTAGLWLLYPKPFFEDTPYILEPGEYPTLEAWGTSGPSVGSLK 1008
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 244790065 1009 PM 1010
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1212-1291 |
2.71e-20 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 86.39 E-value: 2.71e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1212 KIQLFSGPNFLGDHISFEDDQASLPASFHP---QSCRVHGGSWVLFEDKNFEADQHIVSEGEFPTLTAMGCLASTVlGSL 1288
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNsrvNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRI-GSL 79
|
...
gi 244790065 1289 RKV 1291
Cdd:pfam00030 80 RPI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1119-1199 |
1.21e-19 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 84.48 E-value: 1.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1119 VVLFEDMDFQGHRVEVSSALPDVELAQHGPSTQAIHVLSGVWVAYERVGFSGEQFILEKGVYRNCDDWGSGNCALGSLQP 1198
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIRR 81
|
.
gi 244790065 1199 V 1199
Cdd:smart00247 82 I 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1308-1379 |
1.26e-17 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 78.70 E-value: 1.26e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 244790065 1308 FEGKEIELTGEVRSLQAEGFNNHVLSVRVKGGVWVVCEHSDFRGRQWLVGSCEITNWLTYSGTQ-RVGSLYPI 1379
Cdd:smart00247 10 FQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNdQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1212-1289 |
2.90e-15 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 72.16 E-value: 2.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1212 KIQLFSGPNFLGDHISFEDDQASLPASFHP---QSCRVHGGSWVLFEDKNFEADQHIVSEGEFPTLTAMGCLASTVlGSL 1288
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRdnvSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQI-SSI 79
|
.
gi 244790065 1289 R 1289
Cdd:smart00247 80 R 80
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
929-1010 |
1.29e-11 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 61.76 E-value: 1.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 929 RISLFSEEGLKGKPVTLTGDLKDSQGLERPLQVASATVTAGLWLLYPKPFFEDTPYILEPGEYPTLEAWGTSGPSVGSLK 1008
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 244790065 1009 PM 1010
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
842-920 |
3.73e-10 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 57.52 E-value: 3.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 842 KVILFSEPGCRGRGREVWGDIADASA---WDPVASIRVIRGCWILYEQPEFRGQKLSLPEGDVeLRALACAWSLQGFGSL 918
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDygsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEY-PDYQEWGGFNDQISSI 79
|
..
gi 244790065 919 RR 920
Cdd:smart00247 80 RR 81
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
354-607 |
1.51e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 354 SSSPKPQTCAASLTQSPEQPVVPAHLEAQSTPhVLPAvkekftGLSTVPVPPTAKGEVTVPEPPPSPSSPRRKAAPSSQS 433
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGP-ATPG------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 434 PCAPASPKSKFVPDPENVPSSALTQKEVYPCPSVPAHSHIPKEVLQAHGAPKTSSSRPTTVVQN---AEGGPSIKKEVGQ 510
Cdd:PHA03247 2790 SLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGgsvAPGGDVRRRPPSR 2869
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 511 YPQNSPSPCSVP-----CKETVESPTFPAPLPPKQDEVVRDSPgnflsSPTPKGSFQSPPFAPSSSEAKESLSLEGSP-A 584
Cdd:PHA03247 2870 SPAAKPAAPARPpvrrlARPAVSRSTESFALPPDQPERPPQPQ-----APPPPQPQPQPPPPPQPQPPPPPPPRPQPPlA 2944
|
250 260
....*....|....*....|...
gi 244790065 585 SKPMGAEVSTGSQTIPDSTEGKV 607
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGAL 2967
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1384-1511 |
2.18e-05 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 45.60 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1384 AYFRLWNAALGGFLSVPDHVedmKAGRVVVSEPQAG--GSCIW-YYEDGLLKNqMAPTMSLQVIGPpSPGSKVVLWA-ES 1459
Cdd:pfam00652 1 ATGRIRNRASGKCLDVPGGS---SAGGPVGLYPCHGsnGNQLWtLTGDGTIRS-VASDLCLDVGST-ADGAKVVLWPcHP 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 244790065 1460 RLPRQTWSINELGHICSQMFEGQILDVKGGrGYDRDHVVLWEPTKDRLSQIW 1511
Cdd:pfam00652 76 GNGNQRWRYDEDGTQIRNPQSGKCLDVSGA-GTSNGKVILWTCDSGNPNQQW 126
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
252-560 |
3.08e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 48.42 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 252 ASRIPrltmlTSRGSGPGGTVGTTLGQPLEISTTELKNSISALAPvGVPAVDSPAQnidiPVAHPIRDQGGVSDARTEES 331
Cdd:pfam17823 111 ASRAL-----AAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAAC-RANASAAPRA----AIAAASAPHAASPAPRTAAS 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 332 SrlqgassvlllNQTSQSQVPASSSPKPQTCAASLTQSPEQPVVPAhleAQSTPHvlPAVKekfTGLSTVPVPPTAKGEV 411
Cdd:pfam17823 181 S-----------TTAASSTTAASSAPTTAASSAPATLTPARGISTA---ATATGH--PAAG---TALAAVGNSSPAAGTV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 412 TVPEPPPSPSSPRRKAA-----PSSQSPCAPASPKSKFVPDPENVPSSALTQKevyPCPSVPAHSHIPKEVLQAHGAPKT 486
Cdd:pfam17823 242 TAAVGTVTPAALATLAAaagtvASAAGTINMGDPHARRLSPAKHMPSDTMARN---PAAPMGAQAQGPIIQVSTDQPVHN 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 487 SSSRPTTVVQNAEGGPSIKKEVG----------QYPQNSPSPCSVPCKETVESP--------TFPAPLPPKQ-------- 540
Cdd:pfam17823 319 TAGEPTPSPSNTTLEPNTPKSVAstnlavvtttKAQAKEPSASPVPVLHTSMIPeveatsptTQPSPLLPTQgaagpgil 398
|
330 340
....*....|....*....|....
gi 244790065 541 ---DEV-VRDSPGNFLSSPTPKGS 560
Cdd:pfam17823 399 lapEQVaTEATAGTASAGPTPRSS 422
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
726-858 |
2.30e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 726 PTPAKVTCSPMEMMKKLIAGQGPEPQPSNRPTSRLGgsllfgnlvPANKDAPALEPLGTKLSALPPHGAPGVKKVPGQLP 805
Cdd:PHA03378 701 PTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARP---------PAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAP 771
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 244790065 806 LLCSGRPPPE-KPAPIEPPEGwSPAPKTQGKLNTRPGKVILFSEPGCRGRGREV 858
Cdd:PHA03378 772 GAPTPQPPPQaPPAPQQRPRG-APTPQPPPQAGPTSMQLMPRAAPGQQGPTKQI 824
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
262-439 |
4.18e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 41.21 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 262 TSRGSGPGGTVGTTLGQPLEISTTELKNSISALAPvgvPAVDSPAQNIDIPvahpirdqGGVSDARTEESSRLQGASSVL 341
Cdd:PRK11901 99 NNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAP---PQTPNGQQRIELP--------GNISDALSQQQGQVNAASQNA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 342 LLNQTSQSQVPASSSPKPQTCAASLTQSPEQPVVPAhleAQSTPHVLPAVKekftglSTVPVPPTAKGEVTvpepppsps 421
Cdd:PRK11901 168 QGNTSTLPTAPATVAPSKGAKVPATAETHPTPPQKP---ATKKPAVNHHKT------ATVAVPPATSGKPK--------- 229
|
170
....*....|....*...
gi 244790065 422 sPRRKAAPSSQSpcAPAS 439
Cdd:PRK11901 230 -SGAASARALSS--APAS 244
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| beta-trefoil_Ricin_CRYBG2 |
cd23465 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1381-1516 |
7.40e-87 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 2 (CRYBG2) and similar proteins; CRYBG2, also called absent in melanoma 1-like protein (AIM1L), is a beta/gamma-crystallin family protein with a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467343 Cd Length: 136 Bit Score: 278.68 E-value: 7.40e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1381 QRRAYFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCIWYYEDGLLKNQMAPTMSLQVIGPPSPGSKVVLWAESR 1460
Cdd:cd23465 1 QRRVYFRLRNRELGLYLAVPDGVEDMKAGRVVVTEQQEGMSHVWFYEDGLLKNQMAPTMSLQVIGPPDNGAKVVLWSETR 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 244790065 1461 LPRQTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHVL 1516
Cdd:cd23465 81 QPRQTWSIQPSGHILSQMFEGMILDVKGGRTYDRDHVVLWEVSEERPSQIWDMEVL 136
|
|
| beta-trefoil_Ricin_CRYBG |
cd23430 |
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin ... |
1385-1515 |
8.70e-71 |
|
ricin B-type lectin domain, beta-trefoil fold, found in the beta/gamma crystallin domain-containing protein (CRYBG) family; The CRYBG family includes three members: CRYBG1, CRYBG2, and CRYBG3/vlAKAP. CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG2 is also called absent in melanoma 1-like protein (AIM1L). CRYBG3/vlAKAP, also called very large A-kinase anchor protein, is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). CRYBG proteins belong to the beta/gamma-crystallin family. They all contain a ricin B-type lectin domain with a beta-trefoil fold at the C-terminus. The beta-trefoil fold is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467308 [Multi-domain] Cd Length: 133 Bit Score: 232.87 E-value: 8.70e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1385 YFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCIWYYEDGLLKNQMAPTMSLQVIGPPS-PGSKVVLWAESRLPR 1463
Cdd:cd23430 2 YFRLRNKATGLFLSVNGNLEDLKLLRVQVMPDVGADDQIWYYQEGLIKCRIAEDCCLTVIGSLVtPGSKVGLWLEQNADR 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 244790065 1464 QTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHV 1515
Cdd:cd23430 82 QFWSLKSDGRIYSKLKPNLVLDVKGGTQYDQNHVILNTPSEEKFTQVWEIMV 133
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1024-1110 |
2.16e-33 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 123.76 E-value: 2.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1024 KAVVYEAPGFQGQSWEVSRDIYNLQQPEDSqspqlTSVGSLRILGGCWVGYEKEGFRGHQYLLEEGEYADWSNWGGYDEL 1103
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFN-----SRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDR 75
|
....*..
gi 244790065 1104 LTSLRVI 1110
Cdd:pfam00030 76 IGSLRPI 82
|
|
| beta-trefoil_Ricin_vlAKAP |
cd23463 |
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein ... |
1381-1516 |
5.54e-32 |
|
ricin B-type lectin domain, beta-trefoil fold, found in very large A-kinase anchor protein (vlAKAP) and similar proteins; vlAKAP, also called beta/gamma crystallin domain-containing protein 3 (CRYBG3), is an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA). It binds to the dimeric RII-alpha regulatory subunit of PKA (PRKAR2A/PRKAR2B). vlAKAP belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467341 Cd Length: 136 Bit Score: 121.78 E-value: 5.54e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1381 QRRAYFRLWNAALGGFLSVPDHVEDMKAGRVVVSepQAGGSC--IWYYEDGLLKNQMAPTmSLQVIG-PPSPGSKVVLWA 1457
Cdd:cd23463 1 QPRVYLRIKNRAQGLYLTTEGNLADPRATSVCVS--QYNGKDtqIWYYCRGLLKSKANDA-CLDVIGgKDNPGSKVALWT 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 244790065 1458 ESRLPRQTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHVL 1516
Cdd:cd23463 78 EHGKTHQKWRINEDGTISSHLSDDLVLDLKGGNYYDKDHLIVNNPEEDQQTQKWDIELL 136
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1119-1199 |
1.57e-31 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 118.37 E-value: 1.57e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1119 VVLFEDMDFQGHRVEVSSALPDVELAQHGPSTQAIHVLSGVWVAYERVGFSGEQFILEKGVYRNCDDWGSGNCALGSLQP 1198
Cdd:pfam00030 2 IVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLRP 81
|
.
gi 244790065 1199 V 1199
Cdd:pfam00030 82 I 82
|
|
| beta-trefoil_Ricin_CRYBG1 |
cd23464 |
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin ... |
1381-1516 |
1.23e-26 |
|
ricin B-type lectin domain, beta-trefoil fold, found in beta/gamma crystallin domain-containing protein 1 (CRYBG1) and similar proteins; CRYBG1, also called absent in melanoma 1 protein (AIM1), may function as a suppressor of malignant melanoma. It may exert its effects through interactions with the cytoskeleton. CRYBG1 belongs to the beta/gamma-crystallin family. It contains a ricin B-type lectin domain at the C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467342 Cd Length: 137 Bit Score: 106.81 E-value: 1.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1381 QRRAYFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCIWYYEDGLLKNQMAPTMSLQVIGP-PSPGSKVVLWAES 1459
Cdd:cd23464 1 QKRVYFRLRNKETGCFMSTNGNLDDLKLLRIQVLEDTGSDDQIWVYQDGLIRCRMAEDCCLETVGNlVTAGSKLGLSLEQ 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 244790065 1460 RLPRQTWSINELGHICSQMFEGQILDVKGGRGYDRDHVVLWEPTKDRLSQIWTVHVL 1516
Cdd:cd23464 81 GKDNQFWSITSDGRIYSKLKPDLVLDIKGGQQYDQNHVILNTFDEEKLTQRWEVEIL 137
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1024-1110 |
1.06e-25 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 101.82 E-value: 1.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1024 KAVVYEAPGFQGQSWEVSRDIYNLQqPEDSQSpqltSVGSLRILGGCWVGYEKEGFRGHQYLLEEGEYADWSNWGGYDEL 1103
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQ-DYGSRD----NVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQ 75
|
....*..
gi 244790065 1104 LTSLRVI 1110
Cdd:smart00247 76 ISSIRRI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1299-1379 |
3.41e-25 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 100.26 E-value: 3.41e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1299 SLSLFGLECFEGKEIELTGEVRSLQAEGFNNHVLSVRVKGGVWVVCEHSDFRGRQWLVGSCEITNWLTYSG-TQRVGSLY 1377
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGApNDRIGSLR 80
|
..
gi 244790065 1378 PI 1379
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
929-1010 |
8.30e-23 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 93.71 E-value: 8.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 929 RISLFSEEGLKGKPVTLTGDLKDSQGLERPLQVASATVTAGLWLLYPKPFFEDTPYILEPGEYPTLEAWGTSGPSVGSLK 1008
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSLR 80
|
..
gi 244790065 1009 PM 1010
Cdd:pfam00030 81 PI 82
|
|
| Crystall |
pfam00030 |
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ... |
1212-1291 |
2.71e-20 |
|
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.
Pssm-ID: 459639 Cd Length: 82 Bit Score: 86.39 E-value: 2.71e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1212 KIQLFSGPNFLGDHISFEDDQASLPASFHP---QSCRVHGGSWVLFEDKNFEADQHIVSEGEFPTLTAMGCLASTVlGSL 1288
Cdd:pfam00030 1 KIVLYEKENFQGRSIELTDDCPSLQERGFNsrvNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRI-GSL 79
|
...
gi 244790065 1289 RKV 1291
Cdd:pfam00030 80 RPI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1119-1199 |
1.21e-19 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 84.48 E-value: 1.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1119 VVLFEDMDFQGHRVEVSSALPDVELAQHGPSTQAIHVLSGVWVAYERVGFSGEQFILEKGVYRNCDDWGSGNCALGSLQP 1198
Cdd:smart00247 2 ITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIRR 81
|
.
gi 244790065 1199 V 1199
Cdd:smart00247 82 I 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1308-1379 |
1.26e-17 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 78.70 E-value: 1.26e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 244790065 1308 FEGKEIELTGEVRSLQAEGFNNHVLSVRVKGGVWVVCEHSDFRGRQWLVGSCEITNWLTYSGTQ-RVGSLYPI 1379
Cdd:smart00247 10 FQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNdQISSIRRI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
1212-1289 |
2.90e-15 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 72.16 E-value: 2.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1212 KIQLFSGPNFLGDHISFEDDQASLPASFHP---QSCRVHGGSWVLFEDKNFEADQHIVSEGEFPTLTAMGCLASTVlGSL 1288
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRdnvSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQI-SSI 79
|
.
gi 244790065 1289 R 1289
Cdd:smart00247 80 R 80
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
929-1010 |
1.29e-11 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 61.76 E-value: 1.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 929 RISLFSEEGLKGKPVTLTGDLKDSQGLERPLQVASATVTAGLWLLYPKPFFEDTPYILEPGEYPTLEAWGTSGPSVGSLK 1008
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSIR 80
|
..
gi 244790065 1009 PM 1010
Cdd:smart00247 81 RI 82
|
|
| XTALbg |
smart00247 |
Beta/gamma crystallins; Beta/gamma crystallins |
842-920 |
3.73e-10 |
|
Beta/gamma crystallins; Beta/gamma crystallins
Pssm-ID: 214583 Cd Length: 82 Bit Score: 57.52 E-value: 3.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 842 KVILFSEPGCRGRGREVWGDIADASA---WDPVASIRVIRGCWILYEQPEFRGQKLSLPEGDVeLRALACAWSLQGFGSL 918
Cdd:smart00247 1 KITLYEDENFQGRSYELSDDCPSLQDygsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEY-PDYQEWGGFNDQISSI 79
|
..
gi 244790065 919 RR 920
Cdd:smart00247 80 RR 81
|
|
| beta-trefoil_Ricin_SCDase |
cd23456 |
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide ... |
1385-1501 |
6.95e-10 |
|
ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket.
Pssm-ID: 467334 [Multi-domain] Cd Length: 122 Bit Score: 58.14 E-value: 6.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1385 YFRLWNAALGGFLSVPDHVedMKAGRVVVSEPQAGGSCIWYYE-DGLLKNQMAPTMSLQVIGPPSPGSKVVLWAESRLPR 1463
Cdd:cd23456 2 YFQLKSQASGLCLDVSGGA--TNGANVVVYDCNNSNSQKWYYDaTGRLHSKANPGKCLDAGGENSNGANVVLWACNDSAN 79
|
90 100 110
....*....|....*....|....*....|....*...
gi 244790065 1464 QTWSINElGHICSQMFEGQILDVKGGRGydrDHVVLWE 1501
Cdd:cd23456 80 QRWDFDG-NFIRSRNNTNLALDAYGSQG---SNVGLWQ 113
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
354-607 |
1.51e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 1.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 354 SSSPKPQTCAASLTQSPEQPVVPAHLEAQSTPhVLPAvkekftGLSTVPVPPTAKGEVTVPEPPPSPSSPRRKAAPSSQS 433
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVPAGP-ATPG------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVA 2789
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 434 PCAPASPKSKFVPDPENVPSSALTQKEVYPCPSVPAHSHIPKEVLQAHGAPKTSSSRPTTVVQN---AEGGPSIKKEVGQ 510
Cdd:PHA03247 2790 SLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGgsvAPGGDVRRRPPSR 2869
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 511 YPQNSPSPCSVP-----CKETVESPTFPAPLPPKQDEVVRDSPgnflsSPTPKGSFQSPPFAPSSSEAKESLSLEGSP-A 584
Cdd:PHA03247 2870 SPAAKPAAPARPpvrrlARPAVSRSTESFALPPDQPERPPQPQ-----APPPPQPQPQPPPPPQPQPPPPPPPRPQPPlA 2944
|
250 260
....*....|....*....|...
gi 244790065 585 SKPMGAEVSTGSQTIPDSTEGKV 607
Cdd:PHA03247 2945 PTTDPAGAGEPSGAVPQPWLGAL 2967
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
101-605 |
1.71e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 1.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 101 PPPKEKRPTVRVQEAADWGDGGPQAPRTELPGMGSMARTELLVPLPGPREPSPHPHVGVASGGSRNREEWRVTRTVRTTT 180
Cdd:PHA03247 2573 PAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERP 2652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 181 TTTVVGGHVDRRVSSSVSVGPSMSGETLPRgrnvtrtvravvvsPRAEGSPSRSQALEVLSNLMPAERiPPASRIPRLTM 260
Cdd:PHA03247 2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQR--------------PRRRAARPTVGSLTSLADPPPPPP-TPEPAPHALVS 2717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 261 LTSRGSGPGGTVGTTLGQPLEISTTELKNsiSALAPVGVPAVDSPAQNIDIPVAHPIRDQGGVSDARTEESSRLQGASSV 340
Cdd:PHA03247 2718 ATPLPPGPAAARQASPALPAAPAPPAVPA--GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESR 2795
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 341 LLLNQTSQSQVPASSSPKPqTCAASLTQSPEQPVVPAHLEAQSTPHVLPAvkekftglstvPVPPTAKGEVTVPEPPPSp 420
Cdd:PHA03247 2796 ESLPSPWDPADPPAAVLAP-AAALPPAASPAGPLPPPTSAQPTAPPPPPG-----------PPPPSLPLGGSVAPGGDV- 2862
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 421 ssprRKAAPSSQSPCAPASPKskfvpdpeNVPSSALTQKEVYPCPSVPAHSHIPKEVLQAHGAPKTSSSRPTTVVQNAEG 500
Cdd:PHA03247 2863 ----RRRPPSRSPAAKPAAPA--------RPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 501 GPsikKEVGQYPQNSPSPCSVPCKETVESPTFPAP----LPPKQDEVVRD-SPGNFLSSPTPKGSFQSPPFAPSS--SEA 573
Cdd:PHA03247 2931 PP---PPPPPRPQPPLAPTTDPAGAGEPSGAVPQPwlgaLVPGRVAVPRFrVPQPAPSREAPASSTPPLTGHSLSrvSSW 3007
|
490 500 510
....*....|....*....|....*....|....
gi 244790065 574 KESLSLEGSPASKPMGAEvstgsQT--IPDSTEG 605
Cdd:PHA03247 3008 ASSLALHEETDPPPVSLK-----QTlwPPDDTED 3036
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
346-831 |
6.51e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.09 E-value: 6.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 346 TSQSQVPASSSPKPQTCAAslTQSPEQPVVPAHleaQSTPHVLPAVKEKFTG-LSTVPVPPTAkgevTVPEPPPSPSSPR 424
Cdd:PHA03247 2564 PDRSVPPPRPAPRPSEPAV--TSRARRPDAPPQ---SARPRAPVDDRGDPRGpAPPSPLPPDT----HAPDPPPPSPSPA 2634
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 425 RKAAPSSQSPCAPASPKSKFVPDPENV-PSSALTQKEVYPCPSVPAHSHIPKEVLQAHGA----------PKTSSSRPTT 493
Cdd:PHA03247 2635 ANEPDPHPPPTVPPPERPRDDPAPGRVsRPRRARRLGRAAQASSPPQRPRRRAARPTVGSltsladppppPPTPEPAPHA 2714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 494 VVQNAEGGPSIKKEVGQYPQNSPSPCSVPCKETVESPTFPAPLPPKQDEVVRDSPGNFLSSPTPKGSFQSPPFAPSSSEA 573
Cdd:PHA03247 2715 LVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSES 2794
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 574 KESLSLEGSPASKPMGAEVSTGSQTIPDSTEGKVPSEPSEEEDEAALT-ADLEIFLDTLRSMEPPEILRTHRLPRAPrss 652
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPpGPPPPSLPLGGSVAPGGDVRRRPPSRSP--- 2871
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 653 ylamyATLPAIEEDQLGPCVPGPGPQERPVLEEeeeeveeeeeelenpyLSDDEKLRRRQEKAGPRPSLGLHPPTPAKVT 732
Cdd:PHA03247 2872 -----AAKPAAPARPPVRRLARPAVSRSTESFA----------------LPPDQPERPPQPQAPPPPQPQPQPPPPPQPQ 2930
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 733 cspmemmkkliagqgPEPQPSNRPTSRLGgsllfgnlvPANKDAPALEPLGTKLSALPPHGAPGVKKVPGQlpLLCSGRP 812
Cdd:PHA03247 2931 ---------------PPPPPPPRPQPPLA---------PTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRF--RVPQPAP 2984
|
490
....*....|....*....
gi 244790065 813 PPEKPAPIEPPEGWSPAPK 831
Cdd:PHA03247 2985 SREAPASSTPPLTGHSLSR 3003
|
|
| beta-trefoil_Ricin-like |
cd00161 |
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a ... |
1384-1511 |
1.21e-05 |
|
ricin B-type lectin domain, beta-trefoil fold; The ricin B-type lectin domain is a carbohydrate-binding domain formed from presumed gene triplication. It shows a beta-trefoil fold characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. The ricin B-type lectin domain was originally found in Ricin, which is a legume lectin from the seeds of the castor bean plant, Ricinus communis. It is also found in many carbohydrate-recognition proteins like plant and bacterial AB-toxins, glycosidases, or proteases, which serve diverse functions such as inhibitory toxicity, enzymatic activity, and signal transduction. The ricin B-type lectin domain can be present in one or more copies and has been shown in some instances to bind simple sugars, such as galactose or lactose. The most characteristic, though not completely conserved, sequence feature is the presence of a Q-W pattern. Consequently, the ricin B-type lectin domain has also been referred as the (QxW)3 domain and the three homologous regions as the QxW repeats. A disulfide bond is also conserved in some QxW repeats.
Pssm-ID: 467293 [Multi-domain] Cd Length: 134 Bit Score: 46.59 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1384 AYFRLWNAALGGFLSVPDHveDMKAGRVVVSEPQAGGSC-IWYYED-----GLLKNqMAPTMSLQVIG-PPSPGSKVVLW 1456
Cdd:cd00161 1 GTYRIVNAASGKCLDVAGG--STANGAPVQQWTCNGGANqQWTLTPvgdgyYTIRN-VASGKCLDVAGgSTANGANVQQW 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 244790065 1457 AESRLPRQTWSINELG----HICSQMfEGQILDVKGGRGYDRDHVVLWEPTkDRLSQIW 1511
Cdd:cd00161 78 TCNGGDNQQWRLEPVGdgyyRIVNKH-SGKCLDVSGGSTANGANVQQWTCN-GGANQQW 134
|
|
| Ricin_B_lectin |
pfam00652 |
Ricin-type beta-trefoil lectin domain; |
1384-1511 |
2.18e-05 |
|
Ricin-type beta-trefoil lectin domain;
Pssm-ID: 395527 [Multi-domain] Cd Length: 126 Bit Score: 45.60 E-value: 2.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1384 AYFRLWNAALGGFLSVPDHVedmKAGRVVVSEPQAG--GSCIW-YYEDGLLKNqMAPTMSLQVIGPpSPGSKVVLWA-ES 1459
Cdd:pfam00652 1 ATGRIRNRASGKCLDVPGGS---SAGGPVGLYPCHGsnGNQLWtLTGDGTIRS-VASDLCLDVGST-ADGAKVVLWPcHP 75
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 244790065 1460 RLPRQTWSINELGHICSQMFEGQILDVKGGrGYDRDHVVLWEPTKDRLSQIW 1511
Cdd:pfam00652 76 GNGNQRWRYDEDGTQIRNPQSGKCLDVSGA-GTSNGKVILWTCDSGNPNQQW 126
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
252-560 |
3.08e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 48.42 E-value: 3.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 252 ASRIPrltmlTSRGSGPGGTVGTTLGQPLEISTTELKNSISALAPvGVPAVDSPAQnidiPVAHPIRDQGGVSDARTEES 331
Cdd:pfam17823 111 ASRAL-----AAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAAC-RANASAAPRA----AIAAASAPHAASPAPRTAAS 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 332 SrlqgassvlllNQTSQSQVPASSSPKPQTCAASLTQSPEQPVVPAhleAQSTPHvlPAVKekfTGLSTVPVPPTAKGEV 411
Cdd:pfam17823 181 S-----------TTAASSTTAASSAPTTAASSAPATLTPARGISTA---ATATGH--PAAG---TALAAVGNSSPAAGTV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 412 TVPEPPPSPSSPRRKAA-----PSSQSPCAPASPKSKFVPDPENVPSSALTQKevyPCPSVPAHSHIPKEVLQAHGAPKT 486
Cdd:pfam17823 242 TAAVGTVTPAALATLAAaagtvASAAGTINMGDPHARRLSPAKHMPSDTMARN---PAAPMGAQAQGPIIQVSTDQPVHN 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 487 SSSRPTTVVQNAEGGPSIKKEVG----------QYPQNSPSPCSVPCKETVESP--------TFPAPLPPKQ-------- 540
Cdd:pfam17823 319 TAGEPTPSPSNTTLEPNTPKSVAstnlavvtttKAQAKEPSASPVPVLHTSMIPeveatsptTQPSPLLPTQgaagpgil 398
|
330 340
....*....|....*....|....
gi 244790065 541 ---DEV-VRDSPGNFLSSPTPKGS 560
Cdd:pfam17823 399 lapEQVaTEATAGTASAGPTPRSS 422
|
|
| beta-trefoil_Ricin_SCDase_rpt1 |
cd23499 |
first ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ... |
1385-1501 |
7.76e-05 |
|
first ricin B-type lectin domain, beta-trefoil fold, found in Shewanella algae sphingolipid ceramide N-deacylase (SCDase) and similar proteins; SCDase (EC 3.5.1.69) is an enzyme which hydrolyzes the N-acyl linkage between fatty acid and sphingosine in ceramide of various glycosphingolipids and sphingomyelin. Shewanella algae SCDase contains two ricin B-type lectin domains at its C-terminus. The ricin B-type lectin domain shows a beta-trefoil fold, which is characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain may harbor a sugar-binding pocket. The model corresponds to the first lectin domain.
Pssm-ID: 467377 [Multi-domain] Cd Length: 131 Bit Score: 43.98 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1385 YFRLWNAALGGFLSVPDHVEDMKAGRVVVSEPQAGGSCI--WYY--EDGLLKNQMAPTMSLQVIGPPSPGSKVVLWAESR 1460
Cdd:cd23499 2 FVRIVNRASGKCLDIPGNDNDVVNGANVILWDCADKSADqrWIYdaASGMLRNKANPSYCLDNRGQAYNGGEVVLWQCED 81
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 244790065 1461 LPRQTWSINElGHICSQMFEGQILDVkGGRGYDrDHVVLWE 1501
Cdd:cd23499 82 SDNLRWTYDN-GVLRSKHNPNIVLDA-YGRDNN-SQVGQWE 119
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
424-835 |
9.05e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 9.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 424 RRKAAPSSQSPCAPASPKSKFvpdPENVPSSALTQKEVYPCPSVPAHSHIPKEVLQAHGAPKTSSSRPttvvQNAEGGPS 503
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDP---RGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERP----RDDPAPGR 2660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 504 IKKEVGQYPQNSPSPCSVPcketVESPTFPAPLPPKqdevvrdSPGNFLSSPTPkgsfQSPPFAPSSSEAKESLSLEGSP 583
Cdd:PHA03247 2661 VSRPRRARRLGRAAQASSP----PQRPRRRAARPTV-------GSLTSLADPPP----PPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 584 ASKPMGAEVSTGSQTIPDSTEGKVPSEPSEEEDEAALTAdleifldTLRSMEPPEILRTHRLPRAPRSSYLAMYATLPAI 663
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTA-------GPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 664 eedqlgPCVPGPGPQERPVLEeeeeeveeeeeelenpylsddeklRRRQEKAGPRPSLGLHPPTPAKVTCSPMEmmkkli 743
Cdd:PHA03247 2799 ------PSPWDPADPPAAVLA------------------------PAAALPPAASPAGPLPPPTSAQPTAPPPP------ 2842
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 744 agqgPEPQPSNRPtsrLGGSLLFGNlvPANKDAPALEPLGTklSALPPH------GAPGVKKVPGQLPLLCSGRPPPEKP 817
Cdd:PHA03247 2843 ----PGPPPPSLP---LGGSVAPGG--DVRRRPPSRSPAAK--PAAPARppvrrlARPAVSRSTESFALPPDQPERPPQP 2911
|
410 420
....*....|....*....|....*..
gi 244790065 818 ---------APIEPPEGWSPAPKTQGK 835
Cdd:PHA03247 2912 qappppqpqPQPPPPPQPQPPPPPPPR 2938
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
726-858 |
2.30e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 726 PTPAKVTCSPMEMMKKLIAGQGPEPQPSNRPTSRLGgsllfgnlvPANKDAPALEPLGTKLSALPPHGAPGVKKVPGQLP 805
Cdd:PHA03378 701 PTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARP---------PAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAP 771
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 244790065 806 LLCSGRPPPE-KPAPIEPPEGwSPAPKTQGKLNTRPGKVILFSEPGCRGRGREV 858
Cdd:PHA03378 772 GAPTPQPPPQaPPAPQQRPRG-APTPQPPPQAGPTSMQLMPRAAPGQQGPTKQI 824
|
|
| beta-trefoil_Ricin_GllA-1 |
cd23454 |
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; ... |
1421-1513 |
1.85e-03 |
|
GllA-1 domain, beta-trefoil fold, found in Mucor circinelloides Gellins and similar proteins; Gellin proteins act as central effectors of wound-induced protoplasmic gelation. They possess ten related N-terminal beta-trefoil domains (Gll-1 to Gll-10) that contribute to distinct gelation-related activities. The beta-trefoil domains show low sequence similarity to members of the functionally diverse ricin B lectin domain family. They are characterized by 12 beta strands folded into three similar trefoil subdomains (alpha, beta, and gamma) associated to give an overall structure with pseudo-3-fold symmetry. Each subdomain bears a potential sugar binding site. Gellin from M. circinelloides has been called GellinA (also known as GllA). The model corresponds to GllA-1 domain, which is a remote family member of the ricin B-type lectin domain.
Pssm-ID: 467332 [Multi-domain] Cd Length: 136 Bit Score: 39.99 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 1421 SCIWYYEDGLLKNQMaptmSLQVI----GPPSPGSKVVLWAESRLPR---QTWSINELGHICSQMFEGQILDVKGGRGYD 1493
Cdd:cd23454 39 SQLWRYDDGYLVNKA----SGLVLdiqgGVVKSGTRLVQSPKKPSKDannQRWGLTADGYIYLLSNPSLVLGIKGNETRE 114
|
90 100
....*....|....*....|..
gi 244790065 1494 RDHVVLWE--PTKDRLSQIWTV 1513
Cdd:cd23454 115 GARVILQErkLQKDALNQRWTF 136
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
262-439 |
4.18e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 41.21 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 262 TSRGSGPGGTVGTTLGQPLEISTTELKNSISALAPvgvPAVDSPAQNIDIPvahpirdqGGVSDARTEESSRLQGASSVL 341
Cdd:PRK11901 99 NNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAP---PQTPNGQQRIELP--------GNISDALSQQQGQVNAASQNA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 244790065 342 LLNQTSQSQVPASSSPKPQTCAASLTQSPEQPVVPAhleAQSTPHVLPAVKekftglSTVPVPPTAKGEVTvpepppsps 421
Cdd:PRK11901 168 QGNTSTLPTAPATVAPSKGAKVPATAETHPTPPQKP---ATKKPAVNHHKT------ATVAVPPATSGKPK--------- 229
|
170
....*....|....*...
gi 244790065 422 sPRRKAAPSSQSpcAPAS 439
Cdd:PRK11901 230 -SGAASARALSS--APAS 244
|
|
| |
