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Conserved domains on  [gi|124001566|ref|NP_001074212|]
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G protein-coupled receptor kinase 4 isoform 2 [Mus musculus]

Protein Classification

regulator of G-protein signaling domain-containing protein( domain architecture ID 446)

regulator of G-protein signaling (RGS) domain-containing protein belongs to a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs)

CATH:  1.10.167.10
SCOP:  4001125

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RGS super family cl02565
Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part ...
51-145 2.12e-44

Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. While inactive, G-alpha-subunits bind GDP, which is released and replaced by GTP upon agonist activation. GTP binding leads to dissociation of the alpha-subunit and the beta-gamma-dimer, allowing them to interact with effectors molecules and propagate signaling cascades associated with cellular growth, survival, migration, and invasion. Deactivation of the G-protein signaling controlled by the RGS domain accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, which results in the reassociation of the alpha-subunit with the beta-gamma-dimer and thereby inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins are also involved in apoptosis and cell proliferation, as well as modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play important roles in neuronal signals modulation. Some RGS proteins are principal elements needed for proper vision.


The actual alignment was detected with superfamily member cd08750:

Pssm-ID: 470619  Cd Length: 132  Bit Score: 143.11  E-value: 2.12e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  51 DFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKW 130
Cdd:cd08750    1 DYSSLCDKQPIGRLLFRQFCDTRPTLKRCIEFLDAVAEYEVAPDEKRSDCGLSILDTYFNNGSAAHLPEIPQDVVTECRL 80
                         90
                 ....*....|....*
gi 124001566 131 NLKQNsPSQNVFEEC 145
Cdd:cd08750   81 KLEEN-PSKELFEEC 94
 
Name Accession Description Interval E-value
RGS_GRK4 cd08750
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 4 ...
51-145 2.12e-44

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 4 (GRK4); The RGS domain is an essential part of the GRK4 (G protein-coupled receptor kinase4) proteins, which are membrane-associated serine/threonine protein kinases that phosphorylate G protein-coupled receptors (GPCRs) upon agonist stimulation. This phosphorylation initiates beta-arrestin-mediated receptor desensitization, internalization, and signaling events. GRK4 is a member of the GRK kinase family which includes three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. GRK4 plays a key role in regulating dopaminergic-mediated natriuresis and is associated with essential hypertension and/or salt-sensitive hypertension. GRK4 exists in four splice variants involved in hyperphosphorylation, desensitization, and internalization of two dopamine receptors (D1R and D3R). GRK4 also increases the expression of a key receptor of the renin-angiotensin system, the AT1R (angiotensin type 1 receptor). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188704  Cd Length: 132  Bit Score: 143.11  E-value: 2.12e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  51 DFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKW 130
Cdd:cd08750    1 DYSSLCDKQPIGRLLFRQFCDTRPTLKRCIEFLDAVAEYEVAPDEKRSDCGLSILDTYFNNGSAAHLPEIPQDVVTECRL 80
                         90
                 ....*....|....*
gi 124001566 131 NLKQNsPSQNVFEEC 145
Cdd:cd08750   81 KLEEN-PSKELFEEC 94
RGS smart00315
Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins ...
51-145 1.66e-18

Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 214613  Cd Length: 118  Bit Score: 76.54  E-value: 1.66e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566    51 DFSSLCdKQPIGRLLFRQFCDTKPDLkRCIEFLDAVAEYEVTIEEEQR-EFGLAIFSRFFKEKSEVPLpEIPPDIVKECK 129
Cdd:smart00315   1 SLESLL-SDPIGRLLFREFLESEFSE-ENLEFWLAVEEFKKAEDDEERiAKAREIYDKFLSPNAPKEV-NLDSDLREKIE 77
                           90
                   ....*....|....*.
gi 124001566   130 WNLKQNSPSQNVFEEC 145
Cdd:smart00315  78 ENLESEEPPPDLFDEA 93
RGS pfam00615
Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for ...
51-145 2.27e-17

Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 459870  Cd Length: 117  Bit Score: 73.42  E-value: 2.27e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566   51 DFSSLCDKQPiGRLLFRQFCDTKPDlKRCIEFLDAVAEYEVTIEEEQR-EFGLAIFSRFFKEKSEVPLpEIPPDIVKECK 129
Cdd:pfam00615   1 SFDSLLEDQP-GRRLFRQFLESEFS-EENLEFWLACEEFKKADPDEERlKKAKEIYNEFLAPGSPKEI-NLDSDLREEIR 77
                          90
                  ....*....|....*.
gi 124001566  130 WNLKQNsPSQNVFEEC 145
Cdd:pfam00615  78 ENLEKE-PTRDLFDEA 92
 
Name Accession Description Interval E-value
RGS_GRK4 cd08750
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 4 ...
51-145 2.12e-44

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 4 (GRK4); The RGS domain is an essential part of the GRK4 (G protein-coupled receptor kinase4) proteins, which are membrane-associated serine/threonine protein kinases that phosphorylate G protein-coupled receptors (GPCRs) upon agonist stimulation. This phosphorylation initiates beta-arrestin-mediated receptor desensitization, internalization, and signaling events. GRK4 is a member of the GRK kinase family which includes three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. GRK4 plays a key role in regulating dopaminergic-mediated natriuresis and is associated with essential hypertension and/or salt-sensitive hypertension. GRK4 exists in four splice variants involved in hyperphosphorylation, desensitization, and internalization of two dopamine receptors (D1R and D3R). GRK4 also increases the expression of a key receptor of the renin-angiotensin system, the AT1R (angiotensin type 1 receptor). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188704  Cd Length: 132  Bit Score: 143.11  E-value: 2.12e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  51 DFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKW 130
Cdd:cd08750    1 DYSSLCDKQPIGRLLFRQFCDTRPTLKRCIEFLDAVAEYEVAPDEKRSDCGLSILDTYFNNGSAAHLPEIPQDVVTECRL 80
                         90
                 ....*....|....*
gi 124001566 131 NLKQNsPSQNVFEEC 145
Cdd:cd08750   81 KLEEN-PSKELFEEC 94
RGS_GRK6 cd08751
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 6 ...
34-145 3.44e-41

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 6 (GRK6); The RGS domain is an essential part of the GRK6 (G protein-coupled receptor kinase 6) protein which plays an important role in the regulating of dopamine, opioids, M3 muscarinic, and chemokine receptor signaling. GRK6 is a member of the GRK kinase family which includes three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. The RH domain of GRK6 does not have structural determinants that are required for binding G-alpha subunit, in contrast to GRK2 and many other RGS proteins. GRK6 is an important target for treatment of addiction and Parkinson disease. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188705  Cd Length: 145  Bit Score: 135.48  E-value: 3.44e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  34 KFPPVSMCTELRWSIEKDFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKS 113
Cdd:cd08751    1 QFPHISLCEELRQSLERDYHSLCERQPIGRLLFRQFCATRPELSRCVAFLDAVAEYEVTPDEKRKECGQNLTQKYLSHKS 80
                         90       100       110
                 ....*....|....*....|....*....|..
gi 124001566 114 EVPLPEIPPDIVKECKWNLKQnSPSQNVFEEC 145
Cdd:cd08751   81 EDYIPEVPRQLVTNCTQRLEQ-EPCKELFQEL 111
RGS_GRK-like cd08724
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase (GRK); ...
55-145 8.23e-32

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase (GRK); The RGS domain is found in G protein-coupled receptor kinases (GRKs). These proteins play a key role in phosphorylation-dependent desensitization/resensitization of GPCRs (G protein-coupled receptors), intracellular trafficking, endocytosis, as well as in the modulation of important intracellular signaling cascades by GPCR. GRKs also modulate cellular response in phosphorylation-independent manner using their ability to interact with multiple signaling proteins involved in many essential cellular pathways. The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. Based on sequence homology the GRK family consists of three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188679  Cd Length: 114  Bit Score: 110.36  E-value: 8.23e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  55 LCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKWNLKQ 134
Cdd:cd08724    1 ICEQQPIGRLLFRQFCETRPELVPQIEFLDEIKEYEVAEDEERAKKAREIYDKYIMKESLAHSHEFSKDAVEHVQENLEK 80
                         90
                 ....*....|.
gi 124001566 135 NsPSQNVFEEC 145
Cdd:cd08724   81 E-VPKDLFQPY 90
RGS_GRK5 cd08752
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 5 ...
52-145 8.32e-30

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 5 (GRK5); The RGS domain is an essential part of the GRK5 (G protein-coupled receptor kinase 5) protein, a membrane-associated serine/threonine protein kinases which phosphorylates G protein-coupled receptors (GPCRs) upon agonist stimulation. This phosphorylation initiates beta-arrestin-mediated receptor desensitization, internalization, and signaling events. GRK5 is a member of the GRK kinase family which include three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188706  Cd Length: 123  Bit Score: 105.86  E-value: 8.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  52 FSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKWN 131
Cdd:cd08752    1 YCSLCDKQPIGRLLFRQFCETRPGLECYIQFLDSVAEYEVTPDEKLGEKGKEIMTKYLTPKSPVFIPQVGQDLVSQTEEK 80
                         90
                 ....*....|....
gi 124001566 132 LkQNSPSQNVFEEC 145
Cdd:cd08752   81 L-LQKPCKELFSAC 93
RGS_GRK7 cd08749
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 7 ...
36-129 5.76e-19

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 7 (GRK7); The RGS domain is an essential part of the GRK7 (G protein-coupled receptor kinases 7) proteins which together with GRK1 (Rhodopsin kinase) have been implicated in the shutoff of the photoresponse and adaptation to changing light conditions via rod and cone opsin phosphorylation. GRK7 is a member of the GRK kinase family which includes three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. GRK7 is expressed in all vertebrate cones except that of mice and rats, which do not have the gene for GRK7. Lack of either GRK7 or both GRK1 and GRK7 in human leads to a vision defect called Enhanced S Cone syndrome. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188703  Cd Length: 139  Bit Score: 78.35  E-value: 5.76e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  36 PPVSMCTELRWSIEKDFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEV 115
Cdd:cd08749    1 PKPEQCAELRQSLSKDFESLCEQQPIGKRLFRDFLATVPEYTVAADFLDDVQNWELAEEAAKDKARQNIIANFCKAGSKN 80
                         90
                 ....*....|....
gi 124001566 116 PLPEIPPDIVKECK 129
Cdd:cd08749   81 PLSFLSGDVATKCK 94
RGS smart00315
Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins ...
51-145 1.66e-18

Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 214613  Cd Length: 118  Bit Score: 76.54  E-value: 1.66e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566    51 DFSSLCdKQPIGRLLFRQFCDTKPDLkRCIEFLDAVAEYEVTIEEEQR-EFGLAIFSRFFKEKSEVPLpEIPPDIVKECK 129
Cdd:smart00315   1 SLESLL-SDPIGRLLFREFLESEFSE-ENLEFWLAVEEFKKAEDDEERiAKAREIYDKFLSPNAPKEV-NLDSDLREKIE 77
                           90
                   ....*....|....*.
gi 124001566   130 WNLKQNSPSQNVFEEC 145
Cdd:smart00315  78 ENLESEEPPPDLFDEA 93
RGS pfam00615
Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for ...
51-145 2.27e-17

Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 459870  Cd Length: 117  Bit Score: 73.42  E-value: 2.27e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566   51 DFSSLCDKQPiGRLLFRQFCDTKPDlKRCIEFLDAVAEYEVTIEEEQR-EFGLAIFSRFFKEKSEVPLpEIPPDIVKECK 129
Cdd:pfam00615   1 SFDSLLEDQP-GRRLFRQFLESEFS-EENLEFWLACEEFKKADPDEERlKKAKEIYNEFLAPGSPKEI-NLDSDLREEIR 77
                          90
                  ....*....|....*.
gi 124001566  130 WNLKQNsPSQNVFEEC 145
Cdd:pfam00615  78 ENLEKE-PTRDLFDEA 92
RGS_GRK1 cd08748
Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 1 ...
36-137 4.49e-11

Regulator of G protein signaling domain (RGS) found in G protein-coupled receptor kinase 1 (GRK1); The RGS domain is found in G protein-coupled receptor kinases 1 (GRK1, also refered to as Rhodopsin kinase) which play a key role in phosphorylation of rhodopsin (Rho), a G protein-coupled receptor responsible for visual signal transduction in rod cell. GRK1 is a member of the GRK kinase family which includes three major subfamilies: the GRK4 subfamily (GRK4, GRK5 and GRK6), the rhodopsin kinase or visual GRK subfamily (GRK1 and GRK7), and the beta-adrenergic receptor kinases subfamily (GRK2/GRK3). The RGS domain of the GRKs has very little sequence similarity with the canonical RGS domain of the RGS proteins and therefore is often refered to as the RH (RGS Homology) domain. A few inactivation mutations in GRK1 have been found in patients with Oguchi disease, a stationary form of night blindness. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development.


Pssm-ID: 188702  Cd Length: 138  Bit Score: 57.47  E-value: 4.49e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  36 PPVSMCTELRWSIEKDFSSLCDKQPIGRLLFRQFCDTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEV 115
Cdd:cd08748    1 PPLSPCEDLKEELDLSFESMCVEQPIGKRLFQQFLEATEGYAAAVALWKDIEDYDVAEDGERAKKAQAIRNRYLESSSKE 80
                         90       100
                 ....*....|....*....|..
gi 124001566 116 PLPEIPPDIVKECKWNLKQNSP 137
Cdd:cd08748   81 FCAFLDAKAVARVKEDGNKVGD 102
RGS cd07440
Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part ...
59-144 1.91e-05

Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. While inactive, G-alpha-subunits bind GDP, which is released and replaced by GTP upon agonist activation. GTP binding leads to dissociation of the alpha-subunit and the beta-gamma-dimer, allowing them to interact with effectors molecules and propagate signaling cascades associated with cellular growth, survival, migration, and invasion. Deactivation of the G-protein signaling controlled by the RGS domain accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, which results in the reassociation of the alpha-subunit with the beta-gamma-dimer and thereby inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins are also involved in apoptosis and cell proliferation, as well as modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play important roles in neuronal signals modulation. Some RGS proteins are principal elements needed for proper vision.


Pssm-ID: 188659 [Multi-domain]  Cd Length: 113  Bit Score: 41.99  E-value: 1.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124001566  59 QPIGRLLFRQFCDTKPDLKrCIEFLDAVAEYEVTIEEEQREFGLA--IFSRFFKEKSEVPLPeIPPDIVKECKWNLKQNS 136
Cdd:cd07440    3 DPYGLEYFRQFLKSEHCEE-NLEFWLAVEKFKKTTSSDEELKSKAkeIYDKYISKDAPKEIN-IPESIREEIEENLEEPY 80

                 ....*...
gi 124001566 137 PSQNVFEE 144
Cdd:cd07440   81 PDPDCFDE 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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