|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
214-278 |
1.51e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 126.36 E-value: 1.51e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKV 278
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
60-124 |
5.34e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.35 E-value: 5.34e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 60 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRPSKL 124
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
214-279 |
4.35e-28 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 108.06 E-value: 4.35e-28
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 214 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPKYGLFAPVHKVT 279
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
60-125 |
2.25e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.25e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 60 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLKGIFTRPSKLT 125
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
669-1287 |
8.99e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 96.28 E-value: 8.99e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 669 KEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQ------------EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEE 736
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelKAELRELELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 737 KLLDLDA-----------LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS 805
Cdd:TIGR02168 254 ELEELTAelqeleekleeLRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 806 EVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLI 885
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 886 KAKEKLENDIAEIMKMSGDNSSQLTKMndELRLKERDVEELQLKLTKANENASFLQKSIEdmtvKAEQSQQEAAKKHEEE 965
Cdd:TIGR02168 414 DRRERLQQEIEELLKKLEEAELKELQA--ELEELEEELEELQEELERLEEALEELREELE----EAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 966 KKELERKLSDLEKKMETSHNQCQELKARYERA------------TSETKTKHEEILQ-NLQKTLLDTEDKLKGA----RE 1028
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKNQSGLSgilgvlselisvDEGYEAAIEAALGgRLQAVVVENLNAAKKAiaflKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1029 ENSG-----LLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLE---------DTKQTNAKLQNELD----- 1089
Cdd:TIGR02168 568 NELGrvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNALELAKKLRpgyri 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1090 -TL------------KENNLKNVEELNKSKELLTVEnQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD 1156
Cdd:TIGR02168 648 vTLdgdlvrpggvitGGSAKTNSSILERRREIEELE-EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1157 EVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAK---- 1232
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALReald 806
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 1233 SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQ 1287
Cdd:TIGR02168 807 ELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI 861
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
357-1129 |
3.40e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 3.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 357 LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHdqhvLELEAKMDQLRTMVEAADREKVELLNQLEEEKR 436
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV----SELEEEIEELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 437 KVEDLQFRVEEESITKGDLEQKSQisEDPENVATVSEKsrIMELEKDLALRVQEVAELRRRLE--SNKPAGDVDMSLSLL 514
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLD--ELAEELAELEEK--LEELKEELESLEAELEELEAELEelESRLEELEEQLETLR 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 515 QEISSLQEKLEVTRTDHQR---EITSLKEHFG-AREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIAlwks 590
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERleaRLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE---- 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 591 KLETAIASHQQAMEELkVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQD------------SERAAHAKEME 658
Cdd:TIGR02168 462 ALEELREELEEAEQAL-DAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGlsgilgvlseliSVDEGYEAAIE 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 659 -ALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEdtLNKLQEAEIKVKELEVLQAKCNE------------------ 719
Cdd:TIGR02168 541 aALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLP--LDSIKGTEIQGNDREILKNIEGFlgvakdlvkfdpklrkal 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 720 -----QTKVIDNFTS---QLKATEEKL----LDLDALRK------ASSEGKSEMKKLRQQLEAAEKQIKHLEieknaesS 781
Cdd:TIGR02168 619 syllgGVLVVDDLDNaleLAKKLRPGYrivtLDGDLVRPggvitgGSAKTNSSILERRREIEELEEKIEELE-------E 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 782 KASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLE 861
Cdd:TIGR02168 692 KIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 862 KLRENLADMEAKfrekdereeqlikaKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQ 941
Cdd:TIGR02168 772 EAEEELAEAEAE--------------IEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 942 KSIEDMTVKAEQSQQeaakkheeEKKELERKLSDLEKKMETSHNQCQELKARYERAtSETKTKHEEILQNLQKTLLDTED 1021
Cdd:TIGR02168 838 RRLEDLEEQIEELSE--------DIESLAAEIEELEELIEELESELEALLNERASL-EEALALLRSELEELSEELRELES 908
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1022 KLKGAREENSGLLQELEELRKQADKAKA------AQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1095
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGLEVridnlqERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVN 988
|
810 820 830
....*....|....*....|....*....|....
gi 2217290422 1096 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQA 1129
Cdd:TIGR02168 989 LAAIEEYEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
525-1278 |
5.85e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 90.59 E-value: 5.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 525 EVTRTDHQREITSLKEHFGAREETHQKEIKALytatEKLSKENESLKsKLEHANKENSDVIALWKSKLETAIASHQQAME 604
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKA----EEARKAEEAKK-KAEDARKAEEARKAEDARKAEEARKAEDAKRV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 605 ELKVSFSKGLGTETAEFAELKTQIEKMRldyqhEIENLQNQQDSERAAHAKEMEALRAKlmkvikEKENSLEAIRSKLDK 684
Cdd:PTZ00121 1155 EIARKAEDARKAEEARKAEDAKKAEAAR-----KAEEVRKAEELRKAEDARKAEAARKA------EEERKAEEARKAEDA 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 685 AEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEA 764
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKK 1303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 765 AEKQIKHLEIEKNAESSKASSITRELQGRELKL-TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETV 843
Cdd:PTZ00121 1304 ADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKkAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAA 1383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 844 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKE--- 920
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEeak 1463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 921 ------RDVEELQLKLTKANEnASFLQKSIEDMTVKAEQSQQEAAKKH-EEEKKELERKLSDLEKKMETSHNQCQELKAR 993
Cdd:PTZ00121 1464 kkaeeaKKADEAKKKAEEAKK-ADEAKKKAEEAKKKADEAKKAAEAKKkADEAKKAEEAKKADEAKKAEEAKKADEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 994 YERATSETKTKHEEILQNLQKTLLDTEDKlkgAREENSGLLQELEELRkQADKAKaaqtAEDAMQIMEQMTKEKTETLAS 1073
Cdd:PTZ00121 1543 EEKKKADELKKAEELKKAEEKKKAEEAKK---AEEDKNMALRKAEEAK-KAEEAR----IEEVMKLYEEEKKMKAEEAKK 1614
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1074 LEDTKQTNAKLQNEldtlkENNLKNVEELNKSKElltVENQKMEEFRKEIETLKQAAAQKSQQlsalQEENVKLAEELGR 1153
Cdd:PTZ00121 1615 AEEAKIKAEELKKA-----EEEKKKVEQLKKKEA---EEKKKAEELKKAEEENKIKAAEEAKK----AEEDKKKAEEAKK 1682
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1154 SRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASlQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS 1233
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKA-EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH 1761
|
730 740 750 760
....*....|....*....|....*....|....*....|....*
gi 2217290422 1234 LHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAD 1278
Cdd:PTZ00121 1762 LKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDN 1806
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
405-1201 |
7.32e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.12 E-value: 7.32e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 405 ELEAKMDQLRTMVEAADREKvELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEK-SRIMELEKD 483
Cdd:TIGR02168 197 ELERQLKSLERQAEKAERYK-ELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELeEKLEELRLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 484 LALRVQEVAELRRRLesnkpagdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEkL 563
Cdd:TIGR02168 276 VSELEEEIEELQKEL------------YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAE-L 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 564 SKENESLKSKLEHANKENSDVIALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAEL------KTQIEKMRLDYQH 637
Cdd:TIGR02168 343 EEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQIASLNNEIerlearLERLEDRRERLQQ 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 638 EIE-NLQNQQDSERAAHAKEMEALRAKLMKVIKEKENsLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAK 716
Cdd:TIGR02168 422 EIEeLLKKLEEAELKELQAELEELEEELEELQEELER-LEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 717 cneqtkvIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAA-EKQIKHLEIEKNAESSKA-SSITRELQGR- 793
Cdd:TIGR02168 501 -------LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAlGGRLQAVVVENLNAAKKAiAFLKQNELGRv 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 794 ---ELKLTNLQENLSEVSQVKETLEKELQILKE--KFAEASEEAVS-------VQRSMQETVNKLHQKEEQFNMLSSD-- 859
Cdd:TIGR02168 574 tflPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvKFDPKLRKALSyllggvlVVDDLDNALELAKKLRPGYRIVTLDgd 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 860 -------------------------LEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMND 914
Cdd:TIGR02168 654 lvrpggvitggsaktnssilerrreIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 915 ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKkelerklsDLEKKMETSHNQCQELKARY 994
Cdd:TIGR02168 734 DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE--------ELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 995 ERATSETKTKHEEiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQtaEDAMQIMEQMTKEKTETLASL 1074
Cdd:TIGR02168 806 DELRAELTLLNEE-AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI--EELEELIEELESELEALLNER 882
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1075 EDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRS 1154
Cdd:TIGR02168 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK 962
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 1155 RDEvtSHQKLEEERSVLNNQLLEM--------------KKRE---SKFIKDADEEKASLQKSIS 1201
Cdd:TIGR02168 963 IED--DEEEARRRLKRLENKIKELgpvnlaaieeyeelKERYdflTAQKEDLTEAKETLEEAIE 1024
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
668-1227 |
1.37e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.76 E-value: 1.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 668 IKEKENSLEAIRSKLDKAEDqHLVEMEDTLNKLQ-------------------EAEIKVKELEVLQAKCNEQTKVIDNFT 728
Cdd:COG1196 174 KEEAERKLEATEENLERLED-ILGELERQLEPLErqaekaeryrelkeelkelEAELLLLKLRELEAELEELEAELEELE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 729 SQLKATEEKL-----------LDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKL 797
Cdd:COG1196 253 AELEELEAELaeleaeleelrLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 798 TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK 877
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 878 DEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQE 957
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 958 AAKKHEEEKKELERKLSDLEKKMETSHNQ-CQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGARE----ENSG 1032
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGlAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEylkaAKAG 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1033 ----LLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKEL 1108
Cdd:COG1196 573 ratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLE 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1109 LTVENQ----KMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESK 1184
Cdd:COG1196 653 GEGGSAggslTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA 732
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 2217290422 1185 FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1227
Cdd:COG1196 733 EREELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
619-1307 |
2.54e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.12 E-value: 2.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 619 AEFAELKTQIEKMRLDYQHEIENLQNQQDsERAaHAKEMEALRAKLMKV-IKEKENSLEAIRSKLDKAEDQhLVEMEDTL 697
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRR-ERE-KAERYQALLKEKREYeGYELLKEKEALERQKEAIERQ-LASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 698 NKLQ-EAEIKVKELEVLQAKCNEQTKVIDNFTS-QLKATEEKLLDLDALRkASSEGKSEMKKlrQQLEAAEKQIKHLEIE 775
Cdd:TIGR02169 254 EKLTeEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEI-ASLERSIAEKE--RELEDAEERLAKLEAE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 776 KNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLH-------Q 848
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINelkreldR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 849 KEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQL 928
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 929 KLTKANENASFLQKS------------------------------------------------IEDMTVKAEQSQQEAAK 960
Cdd:TIGR02169 491 ELAEAEAQARASEERvrggraveevlkasiqgvhgtvaqlgsvgeryataievaagnrlnnvvVEDDAVAKEAIELLKRR 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 961 KHEEEKKELERKLSDLEKKMETSHNQCQ--------ELKARYERATS---------ETKTKHEEILQNLQKTLLDTEDKL 1023
Cdd:TIGR02169 571 KAGRATFLPLNKMRDERRDLSILSEDGVigfavdlvEFDPKYEPAFKyvfgdtlvvEDIEAARRLMGKYRMVTLEGELFE 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1024 K------GAREENSGLL---QELEELRKQADKAKAAQTAEDAMQI-MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKE 1093
Cdd:TIGR02169 651 KsgamtgGSRAPRGGILfsrSEPAELQRLRERLEGLKRELSSLQSeLRRIENRLDELSQELSDASRKIGEIEKEIEQLEQ 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1094 NNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSR-DEVTSH-QKLEEERSVL 1171
Cdd:TIGR02169 731 EEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiPEIQAElSKLEEEVSRI 810
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1172 NNQLLEMKKRESK-----------------FIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS- 1233
Cdd:TIGR02169 811 EARLREIEQKLNRltlekeylekeiqelqeQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKe 890
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217290422 1234 ---LHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDL 1307
Cdd:TIGR02169 891 rdeLEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEI 967
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
421-1261 |
6.91e-16 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 83.48 E-value: 6.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 421 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENvatvsEKSRIMELEKDLALRVQEVAELRRRLES 500
Cdd:pfam02463 168 KRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQ-----LKEKLELEEEYLLYLDYLKLNEERIDLL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 501 NKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKE 580
Cdd:pfam02463 243 QELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 581 NSdvialwksKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQdsERAAHAKEMEAL 660
Cdd:pfam02463 323 KK--------KAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK--LESERLSSAAKL 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 661 RAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD 740
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEE---ESIELKQGKLTEEKEELEKQELKLLKDELELKK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 741 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKltnlqenlsevsqVKETLEKELQI 820
Cdd:pfam02463 470 SEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRII-------------SAHGRLGDLGV 536
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 821 LKEKFAEASEEAVSVQRSmQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMK 900
Cdd:pfam02463 537 AVENYKVAISTAVIVEVS-ATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEA 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 901 MSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKM 980
Cdd:pfam02463 616 DEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEIL 695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 981 ETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIM 1060
Cdd:pfam02463 696 RRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKE 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1061 EQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSAL 1140
Cdd:pfam02463 776 LAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1141 QEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALL-TEKDAELEKLRN 1219
Cdd:pfam02463 856 LERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERiKEEAEILLKYEE 935
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2217290422 1220 EVTVLRGENASAKSLhsvvqtLESDKVKLELKVKNLELQLKE 1261
Cdd:pfam02463 936 EPEELLLEEADEKEK------EENNKEEEEERNKRLLLAKEE 971
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
341-893 |
1.43e-15 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 82.42 E-value: 1.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 341 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELaLARDGHDQHVLELEAKMDQLRTMVEAA 420
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEV-KELEELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 421 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVatvseKSRIMELEKDLALRVQEVAELRRRLEs 500
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEY-----LDELREIEKRLSRLEEEINGIEERIK- 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 501 nKPAGDVDMSLSLLQEISSLQEKLEVTRTDHQ--REITSLKEhfgaREETHQKEIKALytATEKLSKENESLKSKLEHAN 578
Cdd:PRK03918 332 -ELEEKEERLEELKKKLKELEKRLEELEERHElyEEAKAKKE----ELERLKKRLTGL--TPEKLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 579 KENSDVIALwKSKLETAIASHQQAMEELKvsfsKGLGTETAEFAELKTQIEKMRL-DYQHEIENLQNQQdseraahaKEM 657
Cdd:PRK03918 405 EEISKITAR-IGELKKEIKELKKAIEELK----KAKGKCPVCGRELTEEHRKELLeEYTAELKRIEKEL--------KEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 658 EALRAKLMKVIKEKENSLEAIR--SKLDKAEDQhLVEMEDTLNK--LQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKA 733
Cdd:PRK03918 472 EEKERKLRKELRELEKVLKKESelIKLKELAEQ-LKELEEKLKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 734 TEEKLLDLDALRKASSEGKSEMKKLRQQL--------EAAEKQIKHLE------IEKNAESSKASSITRELQGRELKLTN 799
Cdd:PRK03918 551 LEELKKKLAELEKKLDELEEELAELLKELeelgfesvEELEERLKELEpfyneyLELKDAEKELEREEKELKKLEEELDK 630
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 800 LQENLSEVSQVKETLEKELQILK-----EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEakf 874
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEERE--- 707
|
570
....*....|....*....
gi 2217290422 875 rEKDEREEQLIKAKEKLEN 893
Cdd:PRK03918 708 -KAKKELEKLEKALERVEE 725
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
625-1322 |
1.68e-15 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 82.47 E-value: 1.68e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 625 KTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKV------IKEKENSLEAIRSKLDKAEDQHLVEMEDTLN 698
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLqtklqeMQMERDAMADIRRRESQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 699 KLQEAE-IKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDAL--RKASSEGKSEMKKLRQQLEAAEKQIKHLEIE 775
Cdd:pfam15921 153 ELEAAKcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEAsgKKIYEHDSMSTMHFRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 776 KNAESSKASSITRELQGRELKLTN-----LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ----ETVNKL 846
Cdd:pfam15921 233 ISYLKGRIFPVEDQLEALKSESQNkiellLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEiiqeQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 847 HQKEEQFNMLSSDLEKLRENLADMEAKFREK-DEREEQLIKAKEKLENDIAE---IMKMSGDNSSQLTKMNDEL--RLKE 920
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSELREAKRMYEDKiEELEKQLVLANSELTEARTErdqFSQESGNLDDQLQKLLADLhkREKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 921 RDVEELQLKL-----TKANENASFLQKSIEDMTVKAEQsqqeaakkheeekkelerklsdLEKKMETSHNQCQelkARYE 995
Cdd:pfam15921 393 LSLEKEQNKRlwdrdTGNSITIDHLRRELDDRNMEVQR----------------------LEALLKAMKSECQ---GQME 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 996 RATSETKTKHE--EILQNLQKTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDAMqimEQMTKEKTETLA 1072
Cdd:pfam15921 448 RQMAAIQGKNEslEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSeRTVSDLTASLQEKERAI---EATNAEITKLRS 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1073 SLEDTKQTNAKLQNEldtlkENNLKNVE-ELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1151
Cdd:pfam15921 525 RVDLKLQELQHLKNE-----GDHLRNVQtECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEI 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1152 GRSRDEVTSHQKLEEERsvlNNQLLEMKKReskfIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE-NAS 1230
Cdd:pfam15921 600 NDRRLELQEFKILKDKK---DAKIRELEAR----VSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNElNSL 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1231 AKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQMidfLNSVIVDLQRKNQDLKMK 1310
Cdd:pfam15921 673 SEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMG---MQKQITAKRGQIDALQSK 749
|
730
....*....|..
gi 2217290422 1311 VEMMSEAALNGN 1322
Cdd:pfam15921 750 IQFLEEAMTNAN 761
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
479-1261 |
4.86e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 4.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 479 ELEKDL------ALRVQEVAELRRRLEsnkpagDVDMSLSLLqEISSLQEKLEVTrtdhQREITSLKEhfgaREETHQKE 552
Cdd:TIGR02168 197 ELERQLkslerqAEKAERYKELKAELR------ELELALLVL-RLEELREELEEL----QEELKEAEE----ELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 553 IKALYTATEKLSKENESLKSKLEHANKENSDVIALwKSKLETAIASHQQAMEELKVSFSKGlgteTAEFAELKTQIEKMR 632
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEIEELQKELYALANE-ISRLEQQKQILRERLANLERQLEEL----EAQLEELESKLDELA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 633 LDY---QHEIENLQNQQDSERAAHaKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQhlveMEDTLNKLQEAEIKVKE 709
Cdd:TIGR02168 337 EELaelEEKLEELKEELESLEAEL-EELEAELEELESRLEELEEQLETLRSKVAQLELQ----IASLNNEIERLEARLER 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 710 LEVLQAKcNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIE---KNAESSKASSI 786
Cdd:TIGR02168 412 LEDRRER-LQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQAldaAERELAQLQAR 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 787 TRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE--KFAEASEEAVSV--QRSMQ-----------ETVNKLHQKEE 851
Cdd:TIGR02168 491 LDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEliSVDEGYEAAIEAalGGRLQavvvenlnaakKAIAFLKQNEL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 852 QFNML----SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMkmSG----DNSSQLTKMNDELRLKERDV 923
Cdd:TIGR02168 571 GRVTFlpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLL--GGvlvvDDLDNALELAKKLRPGYRIV 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 924 -----------------EELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKlSDLEKKMETSHNQ 986
Cdd:TIGR02168 649 tldgdlvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEL-EQLRKELEELSRQ 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 987 CQELKARYERATSETKtKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRkqADKAKAAQTAEDAMQIMEQMTKE 1066
Cdd:TIGR02168 728 ISALRKDLARLEAEVE-QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAE--AEIEELEAQIEQLKEELKALREA 804
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1067 KTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVK 1146
Cdd:TIGR02168 805 LDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS 884
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1147 LAEELgrsrdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLrG 1226
Cdd:TIGR02168 885 LEEAL----------ALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLT-L 953
|
810 820 830
....*....|....*....|....*....|....*
gi 2217290422 1227 ENASAKslhsvVQTLESDKVKLELKVKNLELQLKE 1261
Cdd:TIGR02168 954 EEAEAL-----ENKIEDDEEEARRRLKRLENKIKE 983
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
353-1127 |
6.73e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 6.73e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 353 LQEALKEKQQHIEQLLAERD--------LERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRTMVEAADREK 424
Cdd:TIGR02169 189 LDLIIDEKRQQLERLRREREkaeryqalLKEKREYEGYELLKEKEALERQKEAIERQ-LASLEEELEKLTEEISELEKRL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 425 VELLNQLEEEKRKVEDL----QFRVEEE-SITKGDLEQ-KSQISEDPENVATVSEKSRIMELEKDLALRvqEVAELRRRL 498
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDLgeeeQLRVKEKiGELEAEIASlERSIAEKERELEDAEERLAKLEAEIDKLLA--EIEELEREI 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 499 ESNKPAGDvdmslSLLQEISSLQEKLEVTRTDHQREITSLKEHFgareethqKEIKALYTATEKLSKENESLK---SKLE 575
Cdd:TIGR02169 346 EEERKRRD-----KLTEEYAELKEELEDLRAELEEVDKEFAETR--------DELKDYREKLEKLKREINELKrelDRLQ 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 576 HANKENSDVIALWKSKLETAIASHQQAMEELKvsfSKGLGTETAEfAELKtQIEKMRLDYQHEIENLQNQQD---SERAA 652
Cdd:TIGR02169 413 EELQRLSEELADLNAAIAGIEAKINELEEEKE---DKALEIKKQE-WKLE-QLAADLSKYEQELYDLKEEYDrveKELSK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 653 HAKEMEALRAKL----------MKVIKEKENSLEAIR---SKLDKAEDQHLVEMEDTL-NKLQEAeikVKELEVLQAKCN 718
Cdd:TIGR02169 488 LQRELAEAEAQAraseervrggRAVEEVLKASIQGVHgtvAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 719 EQTKvidnftsQLKATEEKLLDLDALRKASSEGKSEMKK-----------LRQQLEAAEKQI-KHLEIEKNAESS----- 781
Cdd:TIGR02169 565 ELLK-------RRKAGRATFLPLNKMRDERRDLSILSEDgvigfavdlveFDPKYEPAFKYVfGDTLVVEDIEAArrlmg 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 782 -------------KASSIT---RELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNK 845
Cdd:TIGR02169 638 kyrmvtlegelfeKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 846 LHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRlkERDVEE 925
Cdd:TIGR02169 718 IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS--HSRIPE 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 926 LQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKkheeekkelerklsdLEKKMETSHNQCQELKAR---YERATSETK 1002
Cdd:TIGR02169 796 IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEY---------------LEKEIQELQEQRIDLKEQiksIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1003 TKHEEI---LQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAaqTAEDAMQIMEQMT--------------- 1064
Cdd:TIGR02169 861 GKKEELeeeLEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA--QIEKKRKRLSELKaklealeeelseied 938
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 1065 -----KEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE----------LNKSKELLTVENQKMEEFRKEIETLK 1127
Cdd:TIGR02169 939 pkgedEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEyeevlkrldeLKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
407-1197 |
7.21e-15 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 80.16 E-value: 7.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 407 EAKMDQLRTMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgDLEQKSQISEDpENVATVSEKSRIMELEKDlal 486
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----ELHEKQKFYLR-QSVIDLQTKLQEMQMERD--- 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 487 rvqEVAELRRRLESNKPagdvdmslSLLQEISSLQEKLEVTRtdhqreitSLKEHFGAREETHQKEIKALYTATEKLSKE 566
Cdd:pfam15921 128 ---AMADIRRRESQSQE--------DLRNQLQNTVHELEAAK--------CLKEDMLEDSNTQIEQLRKMMLSHEGVLQE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 567 NESLKSKLEHAN----KENSDVIALWKSKLETAIASHQQAMEElKVSFSKGlgtetaEFAELKTQIEKMRLDYQHEIENL 642
Cdd:pfam15921 189 IRSILVDFEEASgkkiYEHDSMSTMHFRSLGSAISKILRELDT-EISYLKG------RIFPVEDQLEALKSESQNKIELL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 643 QNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKEL--EVLQAKCNEQ 720
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLrsELREAKRMYE 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 721 TKvIDNFTSQLKATEEKLLDL----DALRKASSEGKSEMKKLRQQLEAAEKQIKhLEIEKNA---ESSKASSIT-----R 788
Cdd:pfam15921 342 DK-IEELEKQLVLANSELTEArterDQFSQESGNLDDQLQKLLADLHKREKELS-LEKEQNKrlwDRDTGNSITidhlrR 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 789 ELQGRELKLTNLQENLSEV-SQVKETLEKELQILKEKfAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 867
Cdd:pfam15921 420 ELDDRNMEVQRLEALLKAMkSECQGQMERQMAAIQGK-NESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTV 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 868 ADMEAKFREKDEREE----QLIKAKEKLENDIAEImkmsgdnsSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKS 943
Cdd:pfam15921 499 SDLTASLQEKERAIEatnaEITKLRSRVDLKLQEL--------QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQ 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 944 IEDMTVKAEQSQQEAAKKHEEEkkelerklSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQ-NLQKTLL----- 1017
Cdd:pfam15921 571 IENMTQLVGQHGRTAGAMQVEK--------AQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDlELEKVKLvnags 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1018 DTEDKLKGAREENSGLLQELEELRKQADkakaaqTAEDAMQIMEQMTKEKTETLASLEDTKQTNAK-LQNELDTLKeNNL 1096
Cdd:pfam15921 643 ERLRAVKDIKQERDQLLNEVKTSRNELN------SLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKsAQSELEQTR-NTL 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1097 KNVEELNKS--------KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSrdeVTSHQKLEEER 1168
Cdd:pfam15921 716 KSMEGSDGHamkvamgmQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTV---ATEKNKMAGEL 792
|
810 820
....*....|....*....|....*....
gi 2217290422 1169 SVLNNQLLEMKKRESKFikDADEEKASLQ 1197
Cdd:pfam15921 793 EVLRSQERRLKEKVANM--EVALDKASLQ 819
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-898 |
7.91e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.90 E-value: 7.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDG---HDQHVLELEAKMDQLRTMVEAADREKVELL 428
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 429 NQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISE----DPENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPA 504
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEaelaEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 505 gdvdmsLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALyTATEKLSKENESLKSKLEHANKEnsdv 584
Cdd:COG1196 403 ------EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA-EEEAELEEEEEALLELLAELLEE---- 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 585 IALWKSKLETAIASHQQAMEELKVSFSKGLGTET-AEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAkemeALRAK 663
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGfLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEA----ALAAA 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 664 LMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA 743
Cdd:COG1196 548 LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTL 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 744 LRKASSEGKSEMKKLRQQLEAAEKQikhLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE 823
Cdd:COG1196 628 VAARLEAALRRAVTLAGRLREVTLE---GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEE 704
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 824 KFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEI 898
Cdd:COG1196 705 EERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
655-1127 |
1.13e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 76.26 E-value: 1.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 655 KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQEAEIKVKELE----VLQAKCNEQTKVIDNFTSQ 730
Cdd:PRK03918 196 KEKEKELEEVLREINEISSELPELREELEKLEKE-VKELEELKEEIEELEKELESLEgskrKLEEKIRELEERIEELKKE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 731 LKATEEKLLDLDALR-----------------KASSEGKSEMKKLRQQLEAAEKQIKHLEiEKNAESSKASSITRELQGR 793
Cdd:PRK03918 275 IEELEEKVKELKELKekaeeyiklsefyeeylDELREIEKRLSRLEEEINGIEERIKELE-EKEERLEELKKKLKELEKR 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 794 ELKLTNLQENLSEVSQVK---------------ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSS 858
Cdd:PRK03918 354 LEELEERHELYEEAKAKKeelerlkkrltgltpEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKK 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 859 D-------------------LEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK 919
Cdd:PRK03918 434 AkgkcpvcgrelteehrkelLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLK 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 920 ERDVEELQLK---LTKANENASFLQKSIEDM--TVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQC------- 987
Cdd:PRK03918 514 KYNLEELEKKaeeYEKLKEKLIKLKGEIKSLkkELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESveeleer 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 988 -QELKARYERATSETKTKHEeiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTkE 1066
Cdd:PRK03918 594 lKELEPFYNEYLELKDAEKE--LEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYL-E 670
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 1067 KTETLASLEDTKQTNAKLQNE----LDTLKEnNLKNVEELNKSKELLTVENQKMEEFRKEIETLK 1127
Cdd:PRK03918 671 LSRELAGLRAELEELEKRREEikktLEKLKE-ELEEREKAKKELEKLEKALERVEELREKVKKYK 734
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-947 |
1.29e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.13 E-value: 1.29e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 352 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELEELE----AELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 432 EEEKRKVEDLQFRVEEESITKGDLEQKSQisedpenvatvSEKSRIMELEKDLALRVQEVAELRRRLESNKPAgdVDMSL 511
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLE-----------ELEEELAELEEELEELEEELEELEEELEEAEEE--LEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 512 SLLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSK 591
Cdd:COG1196 358 AELAEAEEALLEAEAELAEAEEELEELAE----ELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 592 LETAIASHQQAMEELKvsfskglgtETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEmEALRAKLMKVIKEK 671
Cdd:COG1196 434 EEEEEEEEEALEEAAE---------EEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA-AARLLLLLEAEADY 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 672 ENSLEAIRSKLDKAEDQHL---VEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKAS 748
Cdd:COG1196 504 EGFLEGVKAALLLAGLRGLagaVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 749 SEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRE-------LQGRELKLTNLQENLSEVSQVKETLEKELQIL 821
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGrtlvaarLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 822 KEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKM 901
Cdd:COG1196 664 GGSRRELLAALLEAEAELEELAERLAEEELE---LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEE 740
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 2217290422 902 SGDNSSQLTKMNDELRLKERDVEELQLKLTKanenasfLQKSIEDM 947
Cdd:COG1196 741 LLEEEELLEEEALEELPEPPDLEELERELER-------LEREIEAL 779
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
649-1256 |
1.39e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 75.85 E-value: 1.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 649 ERAAHAkemealRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEmedtlnKLQEAEIKVKELEVLQAKCNEQ----TKVI 724
Cdd:PRK02224 169 ERASDA------RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETR 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 725 DNFTSQLKATEEKLLDLDALRKASSE--------------GKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITREL 790
Cdd:PRK02224 237 DEADEVLEEHEERREELETLEAEIEDlretiaeterereeLAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 791 QGRELKLTNLQENLSEVSQVKETLEKELQILKEKFA-------EASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKL 863
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADdleeraeELREEAAELESELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 864 RENLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkMNDELRLKERDVEELQLKLTKANenasflqks 943
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAE--------------LEATLRTARERVEEAEALLEAGK--------- 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 944 iedmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTkhEEILQNLQKTLLDTEDKL 1023
Cdd:PRK02224 454 ------CPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEA--EDRIERLEERREDLEELI 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1024 KGAREENSGLLQELEELRKQADKAKA-AQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlknveel 1102
Cdd:PRK02224 526 AERRETIEEKRERAEELRERAAELEAeAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRT--------- 596
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1103 nkSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshqkLEEERSVLNNQLLEMKKRE 1182
Cdd:PRK02224 597 --LLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR--------IEEAREDKERAEEYLEQVE 666
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2217290422 1183 SKfIKDADEEKASLQKSI-SITSALltekdAELEKLRNEVTVLRGENASAKSLHSVVQTLES--DKVKLELKVKNLE 1256
Cdd:PRK02224 667 EK-LDELREERDDLQAEIgAVENEL-----EELEELRERREALENRVEALEALYDEAEELESmyGDLRAELRQRNVE 737
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
351-898 |
3.94e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.71 E-value: 3.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTM---VEAADREKVEL 427
Cdd:TIGR02168 340 AELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLearLERLEDRRERL 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 428 LNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSE-KSRIMELEKDLALRVQEVAELRRRLES------ 500
Cdd:TIGR02168 420 QQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEElREELEEAEQALDAAERELAQLQARLDSlerlqe 499
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 501 ----------------NKPAGDVDMSLSLL------------------------------QEISSLQEK-------LEVT 527
Cdd:TIGR02168 500 nlegfsegvkallknqSGLSGILGVLSELIsvdegyeaaieaalggrlqavvvenlnaakKAIAFLKQNelgrvtfLPLD 579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 528 RTDHqREITSLKEHFGAREETHQKEIKALYTATEKLSKE----------NESLKSKLEHANKENSD-------------- 583
Cdd:TIGR02168 580 SIKG-TEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAlsyllggvlvVDDLDNALELAKKLRPGyrivtldgdlvrpg 658
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 584 -VIALWKSKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRA 662
Cdd:TIGR02168 659 gVITGGSAKTNSSILERRREIEELE--------EKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISA 730
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 663 --KLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQtkvIDNFTSQLKATEEKLLD 740
Cdd:TIGR02168 731 lrKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQ---IEQLKEELKALREALDE 807
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 741 L----DALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEK 816
Cdd:TIGR02168 808 LraelTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE 887
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 817 ELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKE-KLENDI 895
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALEnKIEDDE 967
|
...
gi 2217290422 896 AEI 898
Cdd:TIGR02168 968 EEA 970
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
357-953 |
5.95e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.00 E-value: 5.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 357 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELAL----ARDGHD---QHVLELEAKMDQLRTMVEAADREKV 425
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIiqeqARNQNSmymRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 426 ELLNQLEEekrkvedlQFRVEEESITKGDLEqKSQISEDPENVATvseksrimELEKDLALRVQEVAELRRRLESNKPAG 505
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTE-RDQFSQESGNLDD--------QLQKLLADLHKREKELSLEKEQNKRLW 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 506 DVDMSLSLlqEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENeSLKSKLEHANKENSDVI 585
Cdd:pfam15921 405 DRDTGNSI--TIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKEMLRKVV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 586 ALWKSKLETaIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQhEIENLQNQQDSERAAHAkEMEALRAKLm 665
Cdd:pfam15921 482 EELTAKKMT-LESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQ-ELQHLKNEGDHLRNVQT-ECEALKLQM- 557
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 666 kviKEKENSLEAIRSKLDKAED---QH-------LVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 735
Cdd:pfam15921 558 ---AEKDKVIEILRQQIENMTQlvgQHgrtagamQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEK 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 736 EKLLDldalrkASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS-EVSQVKETL 814
Cdd:pfam15921 635 VKLVN------AGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKmQLKSAQSEL 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 815 EKELQILKEkFAEASEEAVSVQRSMQETVNKlhqKEEQFNMLSSDLEKLRENLADMEakfREKDEREEQLIKAKEKLEND 894
Cdd:pfam15921 709 EQTRNTLKS-MEGSDGHAMKVAMGMQKQITA---KRGQIDALQSKIQFLEEAMTNAN---KEKHFLKEEKNKLSQELSTV 781
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 895 IAEIMKMSGDnssqltkmNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQ 953
Cdd:pfam15921 782 ATEKNKMAGE--------LEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQ 832
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
212-272 |
6.33e-13 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 73.57 E-value: 6.33e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217290422 212 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLF 272
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
655-1216 |
1.76e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 71.98 E-value: 1.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 655 KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLvEMEDTLNKLqEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKAT 734
Cdd:TIGR04523 134 KENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKE-ELENELNLL-EKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQ 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 735 EEKLL--DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKE 812
Cdd:TIGR04523 212 KNKSLesQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLN 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 813 TLEKELQILKEKFA-----EASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA 887
Cdd:TIGR04523 292 QLKSEISDLNNQKEqdwnkELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 888 KEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQsQQEAAKKHEEEKK 967
Cdd:TIGR04523 372 IEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIK-NNSEIKDLTNQDS 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 968 ELERKLSDLEKKMETSHNQCQELKARYERATSEtktkheeiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1047
Cdd:TIGR04523 451 VKELIIKNLDNTRESLETQLKVLSRSINKIKQN--------LEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSL 522
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1048 KAAQTA-EDAMQIMEQMTKEKTETLASLEDTKQTNA------KLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFR 1120
Cdd:TIGR04523 523 KEKIEKlESEKKEKESKISDLEDELNKDDFELKKENlekeidEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLI 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1121 KEIETLKQAAAQKSQQLSALQEENVKLAEELgrsRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSI 1200
Cdd:TIGR04523 603 KEIEEKEKKISSLEKELEKAKKENEKLSSII---KNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDII 679
|
570
....*....|....*.
gi 2217290422 1201 SITSALLTEKDAELEK 1216
Cdd:TIGR04523 680 ELMKDWLKELSLHYKK 695
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
859-1268 |
1.86e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 72.02 E-value: 1.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 859 DLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENAS 938
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKE 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 939 FL-QKSIEDMTVKAE-QSQQEAAKKHEEEKKELERKLSDLEKKMETShNQCQELKARYERaTSETKTKHEEILQNLQKTL 1016
Cdd:PRK03918 239 EIeELEKELESLEGSkRKLEEKIRELEERIEELKKEIEELEEKVKEL-KELKEKAEEYIK-LSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1017 LDTEDKLKGAREENSGL------LQELEELRKQADKAKA-----AQTAEDAMQIMEQMTKEKTETlasledTKQTNAKLQ 1085
Cdd:PRK03918 317 SRLEEEINGIEERIKELeekeerLEELKKKLKELEKRLEeleerHELYEEAKAKKEELERLKKRL------TGLTPEKLE 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1086 NELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEEN-----VKLAEELGRSRDEVts 1160
Cdd:PRK03918 391 KELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKEL-- 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1161 hQKLEEERSVLNNQLLEMKK---RESKFIKD---ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSL 1234
Cdd:PRK03918 469 -KEIEEKERKLRKELRELEKvlkKESELIKLkelAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKE 547
|
410 420 430
....*....|....*....|....*....|....
gi 2217290422 1235 HSVVQTLESDKVKLELKVKNLELQLKENKRQLSS 1268
Cdd:PRK03918 548 LEKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
351-898 |
3.48e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 3.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQ 430
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE----EELEELEEELEELEEELEEAEEELEEAEAE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 431 LEEEKRKVEDLQfRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKpAGDVDMS 510
Cdd:COG1196 360 LAEAEEALLEAE-AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEAL-AELEEEE 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 511 LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKEnESLKSKLEHANKENSDVIALWKS 590
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARL-LLLLEAEADYEGFLEGVKAALLL 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 591 KLETAIasHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQ---------DSERAAHAKEMEALR 661
Cdd:COG1196 517 AGLRGL--AGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKagratflplDKIRARAALAAALAR 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 662 AKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDL 741
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 742 DALRKASSEGKSEMKKLRQQLEAAEKQikhlEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQIL 821
Cdd:COG1196 675 LEAEAELEELAERLAEEELELEEALLA----EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 822 KEKFAEASEEAVSVQrsmQETVNKLHQKEEQF---NMLSsdLEKLREnladMEAKFREKDEREEQLIKAKEKLENDIAEI 898
Cdd:COG1196 751 EALEELPEPPDLEEL---ERELERLEREIEALgpvNLLA--IEEYEE----LEERYDFLSEQREDLEEARETLEEAIEEI 821
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
917-1235 |
4.76e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 4.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 917 RLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQsqqeaakkheeekkelerklsdLEKKMETSHNQCQELKARYER 996
Cdd:COG1196 221 ELKELEAELLLLKLRELEAELEELEAELEELEAELEE----------------------LEAELAELEAELEELRLELEE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 997 ATSETKTKHEEiLQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDamQIMEQMTKEKTETLASLED 1076
Cdd:COG1196 279 LELELEEAQAE-EYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELE--EELEELEEELEEAEEELEE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1077 TKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD 1156
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 1157 EVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLH 1235
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
547-1266 |
8.74e-12 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 69.75 E-value: 8.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 547 ETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIA------LWKSKLETAIAS----------HQQAMEELKVSF 610
Cdd:pfam05483 109 QENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 611 SKGLGTETAEFAELKTQIEKMRLDYQHEIenlqnQQDSERAAHAKEmealraKLMKVIKEKENSLEAIRSKLDKAEDQhl 690
Cdd:pfam05483 189 NNNIEKMILAFEELRVQAENARLEMHFKL-----KEDHEKIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK-- 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 691 veMEDTLNKLQEAEIKVKELEvlqakcnEQTKVIDNFTSQLKATEEKLL-DLDALRKASSEGKSEMKKLRQQLEAAEKQI 769
Cdd:pfam05483 256 --MKDLTFLLEESRDKANQLE-------EKTKLQDENLKELIEKKDHLTkELEDIKMSLQRSMSTQKALEEDLQIATKTI 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 770 KHLEIEKNA--ESSKASSITRELQGRELKLT--NLQENLSEVSQVKETLEKELQILKEKFAEASEEAvsvqrsmqETVNK 845
Cdd:pfam05483 327 CQLTEEKEAqmEELNKAKAAHSFVVTEFEATtcSLEELLRTEQQRLEKNEDQLKIITMELQKKSSEL--------EEMTK 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 846 LHQKEEqfnmlsSDLEKLRENLADMEAKFREKdereEQLIKAKEKLENDIAEIMKMsgdnssqltkmndeLRLKERDVEE 925
Cdd:pfam05483 399 FKNNKE------VELEELKKILAEDEKLLDEK----KQFEKIAEELKGKEQELIFL--------------LQAREKEIHD 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 926 LQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKlsdlEKKMETSHNQCQELKARYERATSETKTKH 1005
Cdd:pfam05483 455 LEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLEN----KELTQEASDMTLELKKHQEDIINCKKQEE 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1006 EEI--LQNLQKTLLDTEDKLKGAREEnsgLLQELEELRKQADKAKaaqtaEDAMQIMEQMTKEKTetlasledtkqtnak 1083
Cdd:pfam05483 531 RMLkqIENLEEKEMNLRDELESVREE---FIQKGDEVKCKLDKSE-----ENARSIEYEVLKKEK--------------- 587
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1084 lQNELDTLKENNLKNVEElNKSKELltvenqkmEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQK 1163
Cdd:pfam05483 588 -QMKILENKCNNLKKQIE-NKNKNI--------EELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAK------QK 651
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1164 LEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSAL-------LTEKDAELEKLRNEVTVLRGENASAKSLH- 1235
Cdd:pfam05483 652 FEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIdkrcqhkIAEMVALMEKHKHQYDKIIEERDSELGLYk 731
|
730 740 750
....*....|....*....|....*....|.
gi 2217290422 1236 SVVQTLESDKVKLELKVKNLELQLKENKRQL 1266
Cdd:pfam05483 732 NKEQEQSSAKAALEIELSNIKAELLSLKKQL 762
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
369-932 |
8.98e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 70.17 E-value: 8.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 369 AERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 448
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 449 SITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAgdvdmslsllqeisslqeklevtr 528
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA------------------------ 1459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 529 tdhqreitslkEHFGAREETHQKEIKALYTATEKlsKENESLKSKLEHANKENSDviaLWKSKLETAIASHQQAMEELKV 608
Cdd:PTZ00121 1460 -----------EEAKKKAEEAKKADEAKKKAEEA--KKADEAKKKAEEAKKKADE---AKKAAEAKKKADEAKKAEEAKK 1523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 609 SFSKGLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQ 688
Cdd:PTZ00121 1524 ADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEE 1603
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 689 HLVEMEDTLNKLQEAEIKVKELEvlqaKCNEQTKVIDNFTsqlKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQ 768
Cdd:PTZ00121 1604 EKKMKAEEAKKAEEAKIKAEELK----KAEEEKKKVEQLK---KKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKK 1676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 769 IKHLEIEKNAESSKASSITRELQGRElKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQ 848
Cdd:PTZ00121 1677 AEEAKKAEEDEKKAAEALKKEAEEAK-KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE 1755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 849 KEEQFNMLSSDLEKLRENLADMEAKFrekderEEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQL 928
Cdd:PTZ00121 1756 KKKIAHLKKEEEKKAEEIRKEKEAVI------EEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMED 1829
|
....
gi 2217290422 929 KLTK 932
Cdd:PTZ00121 1830 SAIK 1833
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
60-121 |
1.17e-11 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 69.33 E-value: 1.17e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 60 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTRP 121
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
356-1183 |
1.28e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.71 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 356 ALKEKQQHIEQ--LLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQLRTMVEAAdrekVELLNQLEE 433
Cdd:TIGR02169 215 ALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELE-----------KLTEEISELEKRLEEI----EQLLEELNK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 434 E-KRKVEDLQFRVEEE-SITKGDLEQ-KSQISEDPENVATVSEKSRIMELEKDLALRvqEVAELRRRLESNKPAGDvdms 510
Cdd:TIGR02169 280 KiKDLGEEEQLRVKEKiGELEAEIASlERSIAEKERELEDAEERLAKLEAEIDKLLA--EIEELEREIEEERKRRD---- 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 511 lSLLQEISSLQEKLEVTRTDHQREITSLKEHFgareethqKEIKALYTATEKLSKENESLK---SKLEHANKENSDVIAL 587
Cdd:TIGR02169 354 -KLTEEYAELKEELEDLRAELEEVDKEFAETR--------DELKDYREKLEKLKREINELKrelDRLQEELQRLSEELAD 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 588 WKSKLETAIASHQQAMEELKvsfSKGLGTETAEfAELKtQIEKMRLDYQHEIENLQNQQD---SERAAHAKEMEALRAKL 664
Cdd:TIGR02169 425 LNAAIAGIEAKINELEEEKE---DKALEIKKQE-WKLE-QLAADLSKYEQELYDLKEEYDrveKELSKLQRELAEAEAQA 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 665 ----------MKVIKEKENSLEAIR---SKLDKAEDQHLVEMEDTL-NKLQEAeikVKELEVLQAKCNEQTKvidnftsQ 730
Cdd:TIGR02169 500 raseervrggRAVEEVLKASIQGVHgtvAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAIELLK-------R 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 731 LKATEEKLLDLDALRKASSEGKSEMKK-----------LRQQLEAAEKQI-KHLEIEKNAESS----------------- 781
Cdd:TIGR02169 570 RKAGRATFLPLNKMRDERRDLSILSEDgvigfavdlveFDPKYEPAFKYVfGDTLVVEDIEAArrlmgkyrmvtlegelf 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 782 -KASSIT---RELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLS 857
Cdd:TIGR02169 650 eKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLE 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 858 SDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkmndelrlKERDVEELQLKLT--KANE 935
Cdd:TIGR02169 730 QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE---------------------LEEDLHKLEEALNdlEARL 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 936 NASFLQKSIEDMT-VKAEQSQQEAAKkheeekkelerklSDLEKKMETSHNQCQELkaryeratsetktkhEEILQNLQK 1014
Cdd:TIGR02169 789 SHSRIPEIQAELSkLEEEVSRIEARL-------------REIEQKLNRLTLEKEYL---------------EKEIQELQE 840
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1015 TLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQtaEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEN 1094
Cdd:TIGR02169 841 QRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAAL--RDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKR 918
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1095 ------NLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVK----LAEELGRSRDEVTSHQKL 1164
Cdd:TIGR02169 919 lselkaKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLaiqeYEEVLKRLDELKEKRAKL 998
|
890 900
....*....|....*....|.
gi 2217290422 1165 EEERSVLNNQL--LEMKKRES 1183
Cdd:TIGR02169 999 EEERKAILERIeeYEKKKREV 1019
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
543-1126 |
1.35e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.30 E-value: 1.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 543 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELkvsfskglgtetaefA 622
Cdd:PRK02224 191 QLKAQIEEKEEKDLHERLNGLESELAELDEEIERYE-EQREQARETRDEADEVLEEHEERREEL---------------E 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 623 ELKTQIEKMRLDYQheienlqnQQDSERAAHAKEMEALRAKLMKVIKEKENSLEaiRSKLDKAEDQHLVEMEDTLNklqe 702
Cdd:PRK02224 255 TLEAEIEDLRETIA--------ETEREREELAEEVRDLRERLEELEEERDDLLA--EAGLDDADAEAVEARREELE---- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 703 aeikvKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDA----LRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNA 778
Cdd:PRK02224 321 -----DRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeeLREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 779 ESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE--EAVSVQRSMQET-----VNKLHQKEE 851
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllEAGKCPECGQPVegsphVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 852 QFNMLSSDLEKLRENLADMEAKFrekdEREEQLIKAKEKLENdiaeimkmSGDNSSQLTKMNDElrlKERDVEELQLKLT 931
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERL----ERAEDLVEAEDRIER--------LEERREDLEELIAE---RRETIEEKRERAE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 932 KANENASFLQKSIEDMTVKAeQSQQEAAKKHEEEKKELERKLSDLEKKMEtSHNQCQELKARYERATSETKTKHEEiLQN 1011
Cdd:PRK02224 541 ELRERAAELEAEAEEKREAA-AEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDEIERLREK-REA 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1012 LQKTLLDTEDKLKGAREENSGLLQELEELR---KQADKAKAAQTAEDAMQIMEQMTKEKTEtlasledtkqtnakLQNEL 1088
Cdd:PRK02224 618 LAELNDERRERLAEKRERKRELEAEFDEARieeAREDKERAEEYLEQVEEKLDELREERDD--------------LQAEI 683
|
570 580 590
....*....|....*....|....*....|....*...
gi 2217290422 1089 DTLkENNLKNVEELNKSKELLTVENQKMEEFRKEIETL 1126
Cdd:PRK02224 684 GAV-ENELEELEELRERREALENRVEALEALYDEAEEL 720
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1106 |
2.79e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.56 E-value: 2.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 345 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALARDGHDQHVLELE------------ 407
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEdaeerlakleae 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 408 -----AKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKsqisedpenvatvseksrimelek 482
Cdd:TIGR02169 331 idkllAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDE------------------------ 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 483 dLALRVQEVAELRRRLESNKPAGD--VDMSLSLLQEISSLQEKLEVTRTDHQrEITSLKEHFGAREETHQKEIKALYTAT 560
Cdd:TIGR02169 387 -LKDYREKLEKLKREINELKRELDrlQEELQRLSEELADLNAAIAGIEAKIN-ELEEEKEDKALEIKKQEWKLEQLAADL 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 561 EKLSKENESLKSKLEHANKENSDVialwKSKLETAIASHQQAMEELKVSFS--KGLGTETAEFAELKTQIEKMRLDYQHE 638
Cdd:TIGR02169 465 SKYEQELYDLKEEYDRVEKELSKL----QRELAEAEAQARASEERVRGGRAveEVLKASIQGVHGTVAQLGSVGERYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 639 IE-----NLQN--QQDSERAAHA----KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDtlnKLQEAEI 705
Cdd:TIGR02169 541 IEvaagnRLNNvvVEDDAVAKEAiellKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVEFDP---KYEPAFK 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 706 KVKELEVLQAKCNEQTKVIDNFtsQLKATEEKLLDLDAL----RKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESS 781
Cdd:TIGR02169 618 YVFGDTLVVEDIEAARRLMGKY--RMVTLEGELFEKSGAmtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQS 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 782 KASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLE 861
Cdd:TIGR02169 696 ELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLH 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 862 KLRENLADMEAkfREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQ 941
Cdd:TIGR02169 776 KLEEALNDLEA--RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE 853
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 942 KSIEDMTVKAEQSQQeAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKhEEILQNLQKTLLDTED 1021
Cdd:TIGR02169 854 KEIENLNGKKEELEE-ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKK-RKRLSELKAKLEALEE 931
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1022 KLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMT----KEKTETLASLEDTKQTNAKLQNELDTLKEnnlk 1097
Cdd:TIGR02169 932 ELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNmlaiQEYEEVLKRLDELKEKRAKLEEERKAILE---- 1007
|
....*....
gi 2217290422 1098 NVEELNKSK 1106
Cdd:TIGR02169 1008 RIEEYEKKK 1016
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
345-1043 |
2.94e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.56 E-value: 2.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQeLALARDGHDQH--VLELEAKMDQLRTMVEAADR 422
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ-LRVKEKIGELEaeIASLERSIAEKERELEDAEE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 423 EKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVAtvseKSRIMELEKDLALRVQEVAELRRRLESNK 502
Cdd:TIGR02169 323 RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDL----RAELEEVDKEFAETRDELKDYREKLEKLK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 503 PAGDvdmslSLLQEISSLQE---KLEVTRTDHQREITSLKE---HFGAREETHQKEIKA----LYTATEKLSKENES--- 569
Cdd:TIGR02169 399 REIN-----ELKRELDRLQEelqRLSEELADLNAAIAGIEAkinELEEEKEDKALEIKKqewkLEQLAADLSKYEQElyd 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 570 LKSKLEHANKENSDVialwKSKLETAIASHQQAMEELKVSFS--KGLGTETAEFAELKTQIEKMRLDYQHEIE-----NL 642
Cdd:TIGR02169 474 LKEEYDRVEKELSKL----QRELAEAEAQARASEERVRGGRAveEVLKASIQGVHGTVAQLGSVGERYATAIEvaagnRL 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 643 QN--QQDSERAAHA----KEMEALRA------------KLMKVIKEKE-----------------------------NSL 675
Cdd:TIGR02169 550 NNvvVEDDAVAKEAiellKRRKAGRAtflplnkmrderRDLSILSEDGvigfavdlvefdpkyepafkyvfgdtlvvEDI 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 676 EAIRSKLDKAE----DQHLVE---------------------MEDTLNKLQEAEIKVK-ELEVLQAKCNEQTKVIDNFTS 729
Cdd:TIGR02169 630 EAARRLMGKYRmvtlEGELFEksgamtggsraprggilfsrsEPAELQRLRERLEGLKrELSSLQSELRRIENRLDELSQ 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 730 QLKATEEKLldlDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLS---- 805
Cdd:TIGR02169 710 ELSDASRKI---GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNdlea 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 806 ------------EVSQVKET---LEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADM 870
Cdd:TIGR02169 787 rlshsripeiqaELSKLEEEvsrIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEEL 866
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 871 EAKFREKDEREEQLIKAKEKLENDIAEimkmsgdnssqltkMNDELRLKERDVEELQLKLTKANENASFLQKSIEdmTVK 950
Cdd:TIGR02169 867 EEELEELEAALRDLESRLGDLKKERDE--------------LEAQLRELERKIEELEAQIEKKRKRLSELKAKLE--ALE 930
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 951 AEQSQQEAAKKHEEEKKELERKLSDLEKkmetshnQCQELKARYeRATSETKTKHEEILQNLQKTLLDTEDKLKGAREEN 1030
Cdd:TIGR02169 931 EELSEIEDPKGEDEEIPEEELSLEDVQA-------ELQRVEEEI-RALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEER 1002
|
810
....*....|...
gi 2217290422 1031 SGLLQELEELRKQ 1043
Cdd:TIGR02169 1003 KAILERIEEYEKK 1015
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
474-1067 |
1.19e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 1.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 474 KSRIMELEKDLALRVQEVAELRRRLEsnKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKEHFGAREEthqkEI 553
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELP--ELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEE----KI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 554 KALYTATEKLSKENESLKSKLEHANKensdvialwkskletaiashqqaMEELKVSFSKgLGTETAEFAELKTQIEKMRL 633
Cdd:PRK03918 262 RELEERIEELKKEIEELEEKVKELKE-----------------------LKEKAEEYIK-LSEFYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 634 DYQHEIENLQnqqdseraahakemealraKLMKVIKEKENSLEAIRSKLDKAEDQhLVEMEDTLNKLQEAEIKVKELEVL 713
Cdd:PRK03918 318 RLEEEINGIE-------------------ERIKELEEKEERLEELKKKLKELEKR-LEELEERHELYEEAKAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 714 QAKCNEQTKvidnftsqlkatEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKhlEIEKNAESSKASSITRELQGR 793
Cdd:PRK03918 378 KKRLTGLTP------------EKLEKELEELEKAKEEIEEEISKITARIGELKKEIK--ELKKAIEELKKAKGKCPVCGR 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 794 ELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ--RSMQETVNKLHQKEEQFNMLSSDLEKLreNLADME 871
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEkvLKKESELIKLKELAEQLKELEEKLKKY--NLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 872 AKFREKDEREEQLIKAK-------------EKLENDIAEIMKMSGDNSSQLTKMNDELR-LKERDVEELQLKLtkaNENA 937
Cdd:PRK03918 522 KKAEEYEKLKEKLIKLKgeikslkkeleklEELKKKLAELEKKLDELEEELAELLKELEeLGFESVEELEERL---KELE 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 938 SFLQKSIEDMTVKAE-QSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY-----ERATSETKTKHEEI--- 1008
Cdd:PRK03918 599 PFYNEYLELKDAEKElEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYseeeyEELREEYLELSRELagl 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1009 ------LQNLQKTLLDTEDKLKGAREENSG----------LLQELEELRKQADKAKA-------AQTAEDAMQIMEQMTK 1065
Cdd:PRK03918 679 raeleeLEKRREEIKKTLEKLKEELEEREKakkeleklekALERVEELREKVKKYKAllkeralSKVGEIASEIFEELTE 758
|
..
gi 2217290422 1066 EK 1067
Cdd:PRK03918 759 GK 760
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
561-1318 |
3.90e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 64.81 E-value: 3.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 561 EKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKgLGTETAEfaelKTQIEKMRLDYQHEIE 640
Cdd:pfam01576 200 EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALAR-LEEETAQ----KNNALKKIRELEAQIS 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 641 NLQNQQDSERAAhakemealRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEME---------DTLNKLQEAEIKVKELE 711
Cdd:pfam01576 275 ELQEDLESERAA--------RNKAEKQRRDLGEELEALKTELEDTLDTTAAQQElrskreqevTELKKALEEETRSHEAQ 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 712 VLQAKcNEQTKVIDNFTSQLKATEEKLLDLD----ALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSIT 787
Cdd:pfam01576 347 LQEMR-QKHTQALEELTEQLEQAKRNKANLEkakqALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 788 RELQGRELKLTNLQENLSEVSQVKETLEKelqilkeKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENL 867
Cdd:pfam01576 426 RQRAELAEKLSKLQSELESVSSLLNEAEG-------KNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDER 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 868 ADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLT-------KANENASFL 940
Cdd:pfam01576 499 NSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEekaaaydKLEKTKNRL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 941 QKSIEDMTVKAEQSQQeaakkheeekkelerKLSDLEKKMETSHNQCQELK---ARY----ERATSETKTKHEEILqNLQ 1013
Cdd:pfam01576 579 QQELDDLLVDLDHQRQ---------------LVSNLEKKQKKFDQMLAEEKaisARYaeerDRAEAEAREKETRAL-SLA 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1014 KTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQT--NAKLQNE--- 1087
Cdd:pfam01576 643 RALEEALEAKEELERTNKQLRAEMEDLvSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQAteDAKLRLEvnm 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1088 --LDTLKENNLKNVEELNKSKELLTVenQKMEEFRKEIETLKQaaaQKSQQLSALQeenvKLAEELGRSRDEVTSHQKLE 1165
Cdd:pfam01576 723 qaLKAQFERDLQARDEQGEEKRRQLV--KQVRELEAELEDERK---QRAQAVAAKK----KLELDLKELEAQIDAANKGR 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1166 EERSvlnNQLLEMKKRESKFIKDADEEKASlQKSISITSallTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTlESDK 1245
Cdd:pfam01576 794 EEAV---KQLKKLQAQMKDLQRELEEARAS-RDEILAQS---KESEKKLKNLEAELLQLQEDLAASERARRQAQQ-ERDE 865
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1246 VKLELKVKNL-ELQLKENKRQLSSSSGNTDTQADE--------DERAQESQQMIDFLNSVIV--------------DLQR 1302
Cdd:pfam01576 866 LADEIASGASgKSALQDEKRRLEARIAQLEEELEEeqsntellNDRLRKSTLQVEQLTTELAaerstsqksesarqQLER 945
|
810
....*....|....*.
gi 2217290422 1303 KNQDLKMKVEMMSEAA 1318
Cdd:pfam01576 946 QNKELKAKLQEMEGTV 961
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
754-1269 |
4.65e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 64.27 E-value: 4.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 754 EMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAV 833
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 834 SVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMN 913
Cdd:TIGR04523 121 KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 914 ---DELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAakkheeekkelerklSDLEKKMETSHNQCQEL 990
Cdd:TIGR04523 201 lllSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEI---------------SNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 991 KARYERATSETKTKHEEI------LQNLQKTLLD-----TEDKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQI 1059
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIkelekqLNQLKSEISDlnnqkEQDWNKELKSELKNQEKKLEEIQNQISQNN--KIISQLNEQ 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1060 MEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKelltvenQKMEEFRKEIETLKQAAAQKSQQLSA 1139
Cdd:TIGR04523 344 ISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLE-------SQINDLESKIQNQEKLNQQKDEQIKK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1140 LQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLLEMKKRESKF---IKDADEEKASLQKSISITSALLTEKDA 1212
Cdd:TIGR04523 417 LQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVKELIIKNLDNTRESLetqLKVLSRSINKIKQNLEQKQKELKSKEK 496
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217290422 1213 ELEKLRNEVTVLRGENASAK----SLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSS 1269
Cdd:TIGR04523 497 ELKKLNEEKKELEEKVKDLTkkisSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE 557
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
550-1348 |
6.10e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 64.30 E-value: 6.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 550 QKEIKALYTATEKLSKEN---ESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEEL-KVS---FSKGLGTETAE 620
Cdd:TIGR01612 578 EKEIKDLFDKYLEIDDEIiyiNKLKLELKEKIKNISDKNEYIKKaiDLKKIIENNNAYIDELaKISpyqVPEHLKNKDKI 657
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 621 FAELKTQIEKMrldYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKL 700
Cdd:TIGR01612 658 YSTIKSELSKI---YEDDIDALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNEL 734
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 701 QEAEIKVKElEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL--EAAEKQIKHLEIEKNA 778
Cdd:TIGR01612 735 LDIIVEIKK-HIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYndQINIDNIKDEDAKQNY 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 779 ESSKASSITRELQGREL-KLTNlqenlsevsqvketlekELQILKEKFAEASEEAVSVQRSMQETVNKLHqkeEQFNMLS 857
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIfKIIN-----------------EMKFMKDDFLNKVDKFINFENNCKEKIDSEH---EQFAELT 873
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 858 SDL--EKLRENLADMEAKFREKdereeqlikakEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 935
Cdd:TIGR01612 874 NKIkaEISDDKLNDYEKKFNDS-----------KSLINEINKSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNI 942
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 936 NASFLQKSIEdmTVKAEQSQQEaakkheeekkelerklSDLEKKMETSHNQCQEL-KARYERATSETKTKHEEILQ---N 1011
Cdd:TIGR01612 943 LKEILNKNID--TIKESNLIEK----------------SYKDKFDNTLIDKINELdKAFKDASLNDYEAKNNELIKyfnD 1004
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1012 LQKTL-LDTEDKLKGAREENSGLLQELEElrKQADKAKAAQTAEDAM-----QIMEQMTKEKTETLASLE-------DTK 1078
Cdd:TIGR01612 1005 LKANLgKNKENMLYHQFDEKEKATNDIEQ--KIEDANKNIPNIEIAIhtsiyNIIDEIEKEIGKNIELLNkeileeaEIN 1082
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1079 QTN-------AKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAeel 1151
Cdd:TIGR01612 1083 ITNfneikekLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVA--- 1159
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1152 grsrdevtshqkleeERSVLNNQLLEMKKRESKFIKDADEEKASLQksisitsalltekdaELEKLRNEVTvlrgenasa 1231
Cdd:TIGR01612 1160 ---------------DKAISNDDPEEIEKKIENIVTKIDKKKNIYD---------------EIKKLLNEIA--------- 1200
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1232 kslhsvvqTLESDKVKLElKVKNLELQLKENKrqlssssgNTDTQADEDERAQESQQMIDFLNSVIVDLQR-KNQDLKMK 1310
Cdd:TIGR01612 1201 --------EIEKDKTSLE-EVKGINLSYGKNL--------GKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEiKEKSPEIE 1263
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 2217290422 1311 VEMMSEAALNGNGDDLNNYDSDDQEKQ--SKKKPRLFCDI 1348
Cdd:TIGR01612 1264 NEMGIEMDIKAEMETFNISHDDDKDHHiiSKKHDENISDI 1303
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
352-956 |
6.87e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 63.91 E-value: 6.87e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELalardghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR--------EELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 432 EEEKRKVEDLQFRVeEESITKGDLEqksqiSEDPENVAtvsekSRIMELEKDLalrvqevAELRRRLESNKPAgdvdmsl 511
Cdd:PRK02224 282 RDLRERLEELEEER-DDLLAEAGLD-----DADAEAVE-----ARREELEDRD-------EELRDRLEECRVA------- 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 512 slLQEISSLQEKLEVTRTDHQREITSLKEhfgaREETHQKEIKALYTATEKLSKENESLKSKLEhANKENSDVIALWKSK 591
Cdd:PRK02224 337 --AQAHNEEAESLREDADDLEERAEELRE----EAAELESELEEAREAVEDRREEIEELEEEIE-ELRERFGDAPVDLGN 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 592 LETAIASHQQAMEELKVSfskgLGTETAEFAELKTQIEKMR--LDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIK 669
Cdd:PRK02224 410 AEDFLEELREERDELRER----EAELEATLRTARERVEEAEalLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 670 EKENSLEAIRSKLDKAEDqhLVEMEDTLNKLQEAEIKVKELevlqakcneqtkvidnFTSQLKATEEKLLDLDALRKASS 749
Cdd:PRK02224 486 DLEEEVEEVEERLERAED--LVEAEDRIERLEERREDLEEL----------------IAERRETIEEKRERAEELRERAA 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 750 EGKSEMkklRQQLEAAEKQikHLEIEKNAESSKASSITR-ELQGRELKLTNLQENLSEVSQVKETLEkELQILKEKFAEA 828
Cdd:PRK02224 548 ELEAEA---EEKREAAAEA--EEEAEEAREEVAELNSKLaELKERIESLERIRTLLAAIADAEDEIE-RLREKREALAEL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 829 SEEAVSVQRSMQETVNKLHQK--EEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdns 906
Cdd:PRK02224 622 NDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL-------- 693
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 2217290422 907 sqltkmnDELRLKERDVEELQLKLTKANENASFLQKSIedMTVKAEQSQQ 956
Cdd:PRK02224 694 -------EELRERREALENRVEALEALYDEAEELESMY--GDLRAELRQR 734
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
802-1317 |
1.41e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 62.89 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 802 ENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDERE 881
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 882 EQLIKAKEKLENDI-------------------------AEIMKMSGD---NSSQLTKMNDELRLKERDVEELQLKLTKA 933
Cdd:pfam01576 92 QQLQNEKKKMQQHIqdleeqldeeeaarqklqlekvtteAKIKKLEEDillLEDQNSKLSKERKLLEERISEFTSNLAEE 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 934 NENASFLQK----------SIEDMTVKAEQSQQEAAKKHEEekkelerklsdLEKKMETSHNQCQELKARYERATSETKT 1003
Cdd:pfam01576 172 EEKAKSLSKlknkheamisDLEERLKKEEKGRQELEKAKRK-----------LEGESTDLQEQIAELQAQIAELRAQLAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1004 KHEEI---LQNLQKTLLDTEDKLKGAREENSGLLQELEEL-RKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQ 1079
Cdd:pfam01576 241 KEEELqaaLARLEEETAQKNNALKKIRELEAQISELQEDLeSERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1080 TNAKLQNELDTLKennlKNVEELNKSKELLTVE-----NQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrs 1154
Cdd:pfam01576 321 LRSKREQEVTELK----KALEEETRSHEAQLQEmrqkhTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAEL--- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1155 RDEVTSHQKLEEERSVLNNQLLEMKKRESkfikDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSL 1234
Cdd:pfam01576 394 RTLQQAKQDSEHKRKKLEGQLQELQARLS----ESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQ 469
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1235 HSVVQTLESDKVKLELKVKNLELQLKENKRQLSsssgntDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMM 1314
Cdd:pfam01576 470 LQDTQELLQEETRQKLNLSTRLRQLEDERNSLQ------EQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAL 543
|
...
gi 2217290422 1315 SEA 1317
Cdd:pfam01576 544 EEG 546
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
353-1263 |
2.22e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 62.37 E-value: 2.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 353 LQEALKEKQQHIEQLLAERDlERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:TIGR00606 211 YLKQYKEKACEIRDQITSKE-AQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 433 EEKRKVedlqFRVEEESITKGDLEQKSQISEDPENVATVSEKsrIMELEKDLALRVQEVAELRRRLESNKPAGDV--DMS 510
Cdd:TIGR00606 290 LKMEKV----FQGTDEQLNDLYHNHQRTVREKERELVDCQRE--LEKLNKERRLLNQEKTELLVEQGRLQLQADRhqEHI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 511 LSLLQEISSLQEKLEVTRTDHQREItslkehfgareethQKEIKALYTatekLSKENESLKSKLehankensdvIALWKS 590
Cdd:TIGR00606 364 RARDSLIQSLATRLELDGFERGPFS--------------ERQIKNFHT----LVIERQEDEAKT----------AAQLCA 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 591 KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRldyqHEIENLQNQQDSeraahakemealraklMKVIKE 670
Cdd:TIGR00606 416 DLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELK----FVIKELQQLEGS----------------SDRILE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 671 KENSLEAIRSKLDKAEDQHLVEMEdtlnKLQEAEIKVKELEVLQAKCNEQTKV--IDNFTSQLKATE----EKLLDLDAL 744
Cdd:TIGR00606 476 LDQELRKAERELSKAEKNSLTETL----KKEVKSLQNEKADLDRKLRKLDQEMeqLNHHTTTRTQMEmltkDKMDKDEQI 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 745 RKASSEGKSEM-----------------KKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEV 807
Cdd:TIGR00606 552 RKIKSRHSDELtsllgyfpnkkqledwlHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDV 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 808 SQvKETLEKELQILKEKFAEAS-----------------EEAVSVQRSMQETVNKLHQKEEQFNMLSSDLE-KLR---EN 866
Cdd:TIGR00606 632 CG-SQDEESDLERLKEEIEKSSkqramlagatavysqfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQsKLRlapDK 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 867 LADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIED 946
Cdd:TIGR00606 711 LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTD 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 947 MTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKtKHEEILQNLQKTLLDTEDKLKga 1026
Cdd:TIGR00606 791 VTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIE-LNRKLIQDQQEQIQHLKSKTN-- 867
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1027 rEENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVE-ELNKS 1105
Cdd:TIGR00606 868 -ELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQdKVNDI 946
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1106 KELLTVENQKMEEFRKEIETLKQAAAQKSQ--------QLSALQEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLE 1177
Cdd:TIGR00606 947 KEKVKNIHGYMKDIENKIQDGKDDYLKQKEtelntvnaQLEECEKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTL 1023
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1178 MKKRESkfIKDADEEKASLQKSISitSALLTEKDAELEKLRNEVTVLRGENASAkslHSVVQTLESDKVKLELKVKNLEL 1257
Cdd:TIGR00606 1024 RKRENE--LKEVEEELKQHLKEMG--QMQVLQMKQEHQKLEENIDLIKRNHVLA---LGRQKGYEKEIKHFKKELREPQF 1096
|
....*.
gi 2217290422 1258 QLKENK 1263
Cdd:TIGR00606 1097 RDAEEK 1102
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1022-1318 |
3.46e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.49 E-value: 3.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1022 KLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEE 1101
Cdd:COG1196 217 ELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1102 LNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKR 1181
Cdd:COG1196 297 LARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1182 ESKFIKDADE---EKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSlhsvvQTLESDKVKLELKVKNLELQ 1258
Cdd:COG1196 374 LAEAEEELEElaeELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE-----ALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1259 LKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAA 1318
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
354-917 |
3.88e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 61.47 E-value: 3.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 354 QEALKEKQQhIEQLLAERDLeRAEVAKATSHVGEIEQELALARDGHDQHVLEL-EAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:COG4913 242 EALEDAREQ-IELLEPIREL-AERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLD 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 433 EEKRKVEDLQfrveeesitkgdlEQKSQISEDpenvatvseksRIMELEKDLALRVQEVAELRRRLESnkpagdvdmsls 512
Cdd:COG4913 320 ALREELDELE-------------AQIRGNGGD-----------RLEQLEREIERLERELEERERRRAR------------ 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 513 LLQEISSLQEKLEVTR---TDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEH--ANKEN--SDVI 585
Cdd:COG4913 364 LEALLAALGLPLPASAeefAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASleRRKSNipARLL 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 586 ALwKSKLETAIASHQQAM----EELKV---------SFSKGLGT-------ETAEFAELKTQIE----KMRLDYQHEIEN 641
Cdd:COG4913 444 AL-RDALAEALGLDEAELpfvgELIEVrpeeerwrgAIERVLGGfaltllvPPEHYAAALRWVNrlhlRGRLVYERVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 642 LQNQQDSERAAH--AKEME--------------ALRAKLMKV------------------IKEKENSLE-----AIRS-- 680
Cdd:COG4913 523 LPDPERPRLDPDslAGKLDfkphpfrawleaelGRRFDYVCVdspeelrrhpraitragqVKGNGTRHEkddrrRIRSry 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 681 --------KLDKAEDQhLVEMEDTLNKLQEAEIKVK-ELEVLQAKCNEQTKVIDNFTSQL--KATEEKLLDLDALRKASS 749
Cdd:COG4913 603 vlgfdnraKLAALEAE-LAELEEELAEAEERLEALEaELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLD 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 750 EGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELqiLKEKFAEAS 829
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL--LEERFAAAL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 830 EEAV------SVQRSMQETVNKLHQKEEQ-----------FNMLSSD--------------LEKLREN-LADMEAKFRE- 876
Cdd:COG4913 760 GDAVerelreNLEERIDALRARLNRAEEEleramrafnreWPAETADldadleslpeylalLDRLEEDgLPEYEERFKEl 839
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 2217290422 877 KDEREEQLIKA-KEKLENDIAEImkmsgdnSSQLTKMNDELR 917
Cdd:COG4913 840 LNENSIEFVADlLSKLRRAIREI-------KERIDPLNDSLK 874
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
712-938 |
1.00e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 1.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 712 VLQAKCNEQTKVIDNFTSQLKATEEKlldLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknaesskassitRELQ 791
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQE---IAELEKELAALKKEEKALLKQLAALERRIAALA--------------RRIR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 792 GRELKLTNLQENLSEVSQVKETLEKELQILKEKFAE------------------ASEEAVSVQRSMQETVNKLHQKEEQF 853
Cdd:COG4942 73 ALEQELAALEAELAELEKEIAELRAELEAQKEELAEllralyrlgrqpplalllSPEDFLDAVRRLQYLKYLAPARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 854 NMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKA 933
Cdd:COG4942 153 EELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
....*
gi 2217290422 934 NENAS 938
Cdd:COG4942 233 EAEAA 237
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
675-1220 |
1.17e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 59.93 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 675 LEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKELEVLQAKcneqtkvIDNFTSQLKateeklldLDALRKASSEGK 752
Cdd:COG4913 237 LERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAA-------LRLWFAQRR--------LELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 753 SEMKKLRQQLEAAEKQIKHLEIEK-NAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEE 831
Cdd:COG4913 302 AELARLEAELERLEARLDALREELdELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 832 AVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLikakeklENDIAEIMKMSGDNSSQLTK 911
Cdd:COG4913 382 FAALRAEAAALLEALEEELEA----------LEEALAEAEAALRDLRRELREL-------EAEIASLERRKSNIPARLLA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 912 M----NDELRLKERDV----EELQLKltkaNENASFlQKSIE--------DMTVKAEQSQQ----------------EAA 959
Cdd:COG4913 445 LrdalAEALGLDEAELpfvgELIEVR----PEEERW-RGAIErvlggfalTLLVPPEHYAAalrwvnrlhlrgrlvyERV 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 960 KKHEEEKKELERKLSDLEKKMETSHNQCQE-LKARYERATSETKTKHEEILQNLQKTL---------------------- 1016
Cdd:COG4913 520 RTGLPDPERPRLDPDSLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELRRHPRAItragqvkgngtrhekddrrrir 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1017 ------LDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDT 1090
Cdd:COG4913 600 sryvlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1091 LKENNLKnVEELnkskelltveNQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVtshQKLEEERSV 1170
Cdd:COG4913 680 LDASSDD-LAAL----------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRL---EAAEDLARL 745
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1171 LNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNE 1220
Cdd:COG4913 746 ELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
476-1050 |
1.38e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.57 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 476 RIMELEKDLALRVQEVAELRRRLESnkpagdvdmslsLLQEISSLQEKLEVTRTDHQREITSLKEHfGAREETHQKEIKA 555
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEE------------LEAELAELEAELEELRLELEELELELEEA-QAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 556 LYTATEKLSKENESLKSKLEHANKEnsdvIALWKSKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDY 635
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEE----LAELEEELEELEEELEELEEELE--------EAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 636 QHEIENLQNQQDSERAAHAKEMEALRAKLmkVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEvlqa 715
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAA--ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE---- 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 716 kcNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGREL 795
Cdd:COG1196 442 --EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGL 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 796 KLtnLQENLSEVSQVKETLEKEL---------QILKEKFAEASEEAVSVQRSMQETVNKL-HQKEEQFNMLSSDLEKLRE 865
Cdd:COG1196 520 RG--LAGAVAVLIGVEAAYEAALeaalaaalqNIVVEDDEVAAAAIEYLKAAKAGRATFLpLDKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 866 NLADMEAKFREKDEREEQLIKAKEKLENDIAEimkmsgDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIE 945
Cdd:COG1196 598 GAAVDLVASDLREADARYYVLGDTLLGRTLVA------ARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 946 DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKg 1025
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE- 750
|
570 580
....*....|....*....|....*
gi 2217290422 1026 AREENSGLLQELEELRKQADKAKAA 1050
Cdd:COG1196 751 EALEELPEPPDLEELERELERLERE 775
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
554-1266 |
1.87e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 59.21 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 554 KALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEelkvsfSKGLGTETAEFAELKTQIEKMRL 633
Cdd:TIGR00618 190 KSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQ------SHAYLTQKREAQEEQLKKQQLLK 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 634 DYQHEIENLQNQQdserAAHAKEMEAL--RAKLMKVIKEKENSLEairskLDKAEDQHLVEMEDTLNKLQEAEIKVKELE 711
Cdd:TIGR00618 264 QLRARIEELRAQE----AVLEETQERInrARKAAPLAAHIKAVTQ-----IEQQAQRIHTELQSKMRSRAKLLMKRAAHV 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 712 VLQAKCNEQTKVIDnftsQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRE-- 789
Cdd:TIGR00618 335 KQQSSIEEQRRLLQ----TLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREqa 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 790 -LQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLA 868
Cdd:TIGR00618 411 tIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKA 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 869 dMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEdmt 948
Cdd:TIGR00618 491 -VVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQ--- 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 949 vKAEQSQQEAAKKHEEEKKELERKLSDLEK-KMETSHNQCQELKARYERATSETKTKHEeilQNLQKTLLDTEDKLKGAR 1027
Cdd:TIGR00618 567 -EIQQSFSILTQCDNRSKEDIPNLQNITVRlQDLTEKLSEAEDMLACEQHALLRKLQPE---QDLQDVRLHLQQCSQELA 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1028 EENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQmtkektetlasledtkqtNAKLQNELDTLKENNLKNVEELNKSKE 1107
Cdd:TIGR00618 643 LKLTALHALQLTLTQERVREHALSIRVLPKELLAS------------------RQLALQKMQSEKEQLTYWKEMLAQCQT 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1108 LLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKREskfIK 1187
Cdd:TIGR00618 705 LLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAE---LS 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1188 DADEEKASLQKSISITSALLTEKDAELEKLRNEvtvlrGENASAKSLHSVVQTLESDKVKLELK------VKNLELQLKE 1261
Cdd:TIGR00618 782 HLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPS-----DEDILNLQCETLVQEEEQFLSRLEEKsatlgeITHQLLKYEE 856
|
....*
gi 2217290422 1262 NKRQL 1266
Cdd:TIGR00618 857 CSKQL 861
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
638-1066 |
2.50e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.63 E-value: 2.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 638 EIENLQNQQDSERAAHAKEMEALRAKL------MKVIKEKENSLEAIRSKLDKAEDQ--HLVEMEDTLNKLQEAEIKVKE 709
Cdd:COG4717 54 EADELFKPQGRKPELNLKELKELEEELkeaeekEEEYAELQEELEELEEELEELEAEleELREELEKLEKLLQLLPLYQE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 710 LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQL-EAAEKQIKHLEIEKNAESSKASSITR 788
Cdd:COG4717 134 LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEE 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 789 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEE------------QFNML 856
Cdd:COG4717 214 ELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAgvlflvlgllalLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 857 SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN 936
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 937 ASFLQ---KSIEDMTVKAEQSQQEAakkheeekkelerklsDLEKKMETSHNQCQEL-KARYERATSETKTKHEEILQNL 1012
Cdd:COG4717 374 ALLAEagvEDEEELRAALEQAEEYQ----------------ELKEELEELEEQLEELlGELEELLEALDEEELEEELEEL 437
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 1013 QKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKE 1066
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
753-956 |
2.57e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 2.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 753 SEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEA 832
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 833 VSVQRSMQETVNKLHQKEEQ----FNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQ 908
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQpplaLLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2217290422 909 LTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 956
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
345-1124 |
2.62e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.58 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 345 RKISGTTALQEALKEKQQHIEQLLAERDLERAE-VAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAADRE 423
Cdd:pfam05483 42 QKLNFLPMLEQVANSGDCHYQEGLKDSDFENSEgLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 424 KVELlnQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEK--------DLALRVQEVAELR 495
Cdd:pfam05483 122 IQEL--QFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEReetrqvymDLNNNIEKMILAF 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 496 RRLESNKPAGDVDMSLSLLQE---ISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKS 572
Cdd:pfam05483 200 EELRVQAENARLEMHFKLKEDhekIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 573 KLEHANKENSDVIALWKSkletaiashqqaMEELKVSFSKGLGTETAEFAELKTQIEKMrldyqheienlqNQQDSERAA 652
Cdd:pfam05483 280 QDENLKELIEKKDHLTKE------------LEDIKMSLQRSMSTQKALEEDLQIATKTI------------CQLTEEKEA 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 653 HAKEMEALRAKLMKVIKEKENSLEAIRSKLdKAEDQHLVEMEDTLNKL-QEAEIKVKELEVLQAKCNEQTKVIDNFTSQL 731
Cdd:pfam05483 336 QMEELNKAKAAHSFVVTEFEATTCSLEELL-RTEQQRLEKNEDQLKIItMELQKKSSELEEMTKFKNNKEVELEELKKIL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 732 KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAE-------SSKASSITRELQGRELKLTNLQENL 804
Cdd:pfam05483 415 AEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIktseehyLKEVEDLKTELEKEKLKNIELTAHC 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 805 SEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQL 884
Cdd:pfam05483 495 DKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEEN 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 885 IKAKEKLENDIAEIMKMSGDNSSQLTKmndELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQsqqeaakkhee 964
Cdd:pfam05483 575 ARSIEYEVLKKEKQMKILENKCNNLKK---QIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK----------- 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 965 ekkelerklsdLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKgareensglLQELEELRKQA 1044
Cdd:pfam05483 641 -----------LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVK---------LQKEIDKRCQH 700
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1045 DKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTlKENNLKNveELNKSKELLTVENQKMEEFRKEIE 1124
Cdd:pfam05483 701 KIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEI-ELSNIKA--ELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
755-1181 |
3.12e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.24 E-value: 3.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 755 MKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFaeaseEAVS 834
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLE 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 835 VQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEndiAEIMKMSGDNSSQLTKMND 914
Cdd:COG4717 123 KLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 915 ELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLE----------------- 977
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLglggsllsliltiagvl 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 978 --------------KKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQ 1043
Cdd:COG4717 280 flvlgllallflllAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1044 ADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEnnlkNVEELNKSKELLTVENQKmEEFRKEI 1123
Cdd:COG4717 360 EEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEE----QLEELLGELEELLEALDE-EELEEEL 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 1124 ETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEvTSHQKLEEERSVLNNQLLEMKKR 1181
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEED-GELAELLQELEELKAELRELAEE 491
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
410-947 |
4.20e-08 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 57.99 E-value: 4.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 410 MDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLE-QKSQISEDPENVATVSE-----KSRIMELEKD 483
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMdDYNNLKSALNELSSLEDmknryESEIKTAESD 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 484 LALRVQEVAELR------RRLESNKPAGDVDMSLSLLQEISSLQEKLEVtrtdhqreITSLKEHFGAREETHQK--EIKA 555
Cdd:PRK01156 265 LSMELEKNNYYKeleerhMKIINDPVYKNRNYINDYFKYKNDIENKKQI--------LSNIDAEINKYHAIIKKlsVLQK 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 556 LYTATEKLSKENESLKSKLEHANKENSDVIALWKS--KLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMRL 633
Cdd:PRK01156 337 DYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieSLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 634 DYQHEIENLQNQQDSERAAHAKEMEALRAKLMKvikEKENSLEAIRSKLDKAEDQHLVEmeDTLNKLQEAEIKVKELEVL 713
Cdd:PRK01156 417 KLQDISSKVSSLNQRIRALRENLDELSRNMEML---NGQSVCPVCGTTLGEEKSNHIIN--HYNEKKSRLEEKIREIEIE 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 714 QAKCNEQTKVIDNFTSQLKATE--------EKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEkNAESSKASS 785
Cdd:PRK01156 492 VKDIDEKIVDLKKRKEYLESEEinksineyNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLE-DLDSKRTSW 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 786 ITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRE 865
Cdd:PRK01156 571 LNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRG 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 866 NLADMEAKFREKDEREEQLIKAKEKLeNDIAEIMKMSgdnSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIE 945
Cdd:PRK01156 651 KIDNYKKQIAEIDSIIPDLKEITSRI-NDIEDNLKKS---RKALDDAKANRARLESTIEILRTRINELSDRINDINETLE 726
|
..
gi 2217290422 946 DM 947
Cdd:PRK01156 727 SM 728
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1383-1399 |
1.02e-07 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.00 E-value: 1.02e-07
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
997-1201 |
1.20e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.54 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 997 ATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQ-ADKAKAAQTAEDAMQIMEQ----MTKEKTETL 1071
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiAALARRIRALEQELAALEAelaeLEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1072 ASLEDTKQTNAKLQNELDTLKENN----LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKL 1147
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 1148 AEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSIS 1201
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
560-1123 |
1.67e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.80 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 560 TEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEI 639
Cdd:TIGR04523 180 KEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNT----QTQL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 640 ENLQNQQDSE-RAAHAKEMEALRAKlmKVIKEKENSLEAIRSKLDKAEDQhlvEMEDTLNKLQ-EAEIKVKELEVLQAKC 717
Cdd:TIGR04523 256 NQLKDEQNKIkKQLSEKQKELEQNN--KKIKELEKQLNQLKSEISDLNNQ---KEQDWNKELKsELKNQEKKLEEIQNQI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 718 NEQTKVIDNFTSQLKATEEKLLDLDalrkassegkSEMKKLRQQLEAAEKQIKHLEIEKNAES-------SKASSITREL 790
Cdd:TIGR04523 331 SQNNKIISQLNEQISQLKKELTNSE----------SENSEKQRELEEKQNEIEKLKKENQSYKqeiknleSQINDLESKI 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 791 QGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVS----------------------------VQRSMQET 842
Cdd:TIGR04523 401 QNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDltnqdsvkeliiknldntresletqlkvLSRSINKI 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 843 VNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR--LKE 920
Cdd:TIGR04523 481 KQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKkeNLE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 921 RDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeEKKELERKLSDLEKKMETSHNQCQELKARYERATSE 1000
Cdd:TIGR04523 561 KEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEK--------EKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSI 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1001 tKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADkakaaqtaeDAMQIMEQMTKEKTETlaslEDTKQT 1080
Cdd:TIGR04523 633 -IKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKID---------DIIELMKDWLKELSLH----YKKYIT 698
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 2217290422 1081 NAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEI 1123
Cdd:TIGR04523 699 RMIRIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNKKF 741
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
335-1288 |
2.71e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 2.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 335 LLTETSSRYARKISGTTALQEALKEKQQHIEQLlaERDLERAEVAKATSHVGEIEQELALARdgHDQHVLELEAKMDQLR 414
Cdd:pfam01576 76 ILHELESRLEEEEERSQQLQNEKKKMQQHIQDL--EEQLDEEEAARQKLQLEKVTTEAKIKK--LEEDILLLEDQNSKLS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 415 TMVEAADREKVELLNQLEEEKRKVEDLqfrveeesiTKGDLEQKSQISedpenvatvseksrimelekDLALRVQEVAEL 494
Cdd:pfam01576 152 KERKLLEERISEFTSNLAEEEEKAKSL---------SKLKNKHEAMIS--------------------DLEERLKKEEKG 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 495 RRRLESNKPAGDvdmslsllQEISSLQEKLevtrTDHQREITSLKEHFGAREETHQkeiKALYTATEKLSKENESLKSKL 574
Cdd:pfam01576 203 RQELEKAKRKLE--------GESTDLQEQI----AELQAQIAELRAQLAKKEEELQ---AALARLEEETAQKNNALKKIR 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 575 EHAN-----KENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTeTAEFAELKTQIEKmrldyqhEIENLQNQQDSE 649
Cdd:pfam01576 268 ELEAqiselQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDT-TAAQQELRSKREQ-------EVTELKKALEEE 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 650 RAAHAKEMEALRAKLMKVIKEKENSLEA---IRSKLDKA------EDQHLVEMEDTLNKL-QEAEIKVKELEV----LQA 715
Cdd:pfam01576 340 TRSHEAQLQEMRQKHTQALEELTEQLEQakrNKANLEKAkqalesENAELQAELRTLQQAkQDSEHKRKKLEGqlqeLQA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 716 KCNEQTKVIDNFTSQLKATEeklLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGREL 795
Cdd:pfam01576 420 RLSESERQRAELAEKLSKLQ---SELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLED 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 796 KLTNLQENLSEVSQVKETLEKELQILK----------EKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRE 865
Cdd:pfam01576 497 ERNSLQEQLEEEEEAKRNVERQLSTLQaqlsdmkkklEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKN 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 866 NLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIE 945
Cdd:pfam01576 577 RLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELE 656
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 946 dmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSEtktkheeiLQNLQKTLLDTEDKLKG 1025
Cdd:pfam01576 657 ----RTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDE--------LQATEDAKLRLEVNMQA 724
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1026 AREENSGLLQELEELRKQADKAKAAQTAEDAMQiMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1105
Cdd:pfam01576 725 LKAQFERDLQARDEQGEEKRRQLVKQVRELEAE-LEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKL 803
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1106 KELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRS-RDEVTSHQKLEEERSVLNNQ------LLEM 1178
Cdd:pfam01576 804 QAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASeRARRQAQQERDELADEIASGasgksaLQDE 883
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1179 KKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEvtvLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQ 1258
Cdd:pfam01576 884 KRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTE---LAAERSTSQKSESARQQLERQNKELKAKLQEMEGT 960
|
970 980 990
....*....|....*....|....*....|
gi 2217290422 1259 LKeNKRQLSSSSGNTDTQADEDERAQESQQ 1288
Cdd:pfam01576 961 VK-SKFKSSIAALEAKIAQLEEQLEQESRE 989
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
979-1313 |
2.77e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.47 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 979 KMETSHNqCQELKARYERatSETKTKHEEILQNlQKTLLDTEDKLKGAREEnsglLQELEELRKQADKAKaaqtaedamQ 1058
Cdd:COG5022 837 EVEFSLK-AEVLIQKFGR--SLKAKKRFSLLKK-ETIYLQSAQRVELAERQ----LQELKIDVKSISSLK---------L 899
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1059 IMEQMTKEKTETLASLEDTKQTNAKLQNELDT-LKENNLKNVEELNKSKELltVENQKMEEFRKEIETLKQAaaqkSQQL 1137
Cdd:COG5022 900 VNLELESEIIELKKSLSSDLIENLEFKTELIArLKKLLNNIDLEEGPSIEY--VKLPELNKLHEVESKLKET----SEEY 973
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1138 SALQEENVKLAEELGRSRDEVTSHQK----LEEERSVLNNQLLEMKKRE---------SKFIKDADEEKASLQKSISITS 1204
Cdd:COG5022 974 EDLLKKSTILVREGNKANSELKNFKKelaeLSKQYGALQESTKQLKELPvevaelqsaSKIISSESTELSILKPLQKLKG 1053
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1205 ALLtekdAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKL-ELKVKNLELqlkeNKRQLSSSSGNTDTQADEDERA 1283
Cdd:COG5022 1054 LLL----LENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLkTINVKDLEV----TNRNLVKPANVLQFIVAQMIKL 1125
|
330 340 350
....*....|....*....|....*....|
gi 2217290422 1284 QESQQMIDFLNSVIVDLQRKNQDLKMKVEM 1313
Cdd:COG5022 1126 NLLQEISKFLSQLVNTLEPVFQKLSVLQLE 1155
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
626-1273 |
3.69e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.08 E-value: 3.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 626 TQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIR--SKLDKAE--DQHLVEMEDTLNKLQ 701
Cdd:COG5022 806 LGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKrfSLLKKETiyLQSAQRVELAERQLQ 885
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 702 EAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE--------EKLLDL-DALRKASSEGKSEMK----KLRQQLEAAEKQ 768
Cdd:COG5022 886 ELKIDVKSISSLKLVNLELESEIIELKKSLSSDLienlefktELIARLkKLLNNIDLEEGPSIEyvklPELNKLHEVESK 965
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 769 IKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQ 848
Cdd:COG5022 966 LKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSESTELSIL 1045
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 849 KEEQfnmlssDLEKLrenladMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnSSQLTKMNDELRLKERDVEELQL 928
Cdd:COG5022 1046 KPLQ------KLKGL------LLLENNQLQARYKALKLRRENSLLDDKQL-------YQLESTENLLKTINVKDLEVTNR 1106
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 929 KLTKAnenASFLQKSIedmtvkaeqSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEI 1008
Cdd:COG5022 1107 NLVKP---ANVLQFIV---------AQMIKLNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPF 1174
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1009 LQNLQKTLLD---TEDKLKGAREENSGLLQELEELRKQ-------ADKAKAAQTAEDAMqimeqmtkekTETLASLEDTK 1078
Cdd:COG5022 1175 AALSEKRLYQsalYDEKSKLSSSEVNDLKNELIALFSKifsgwprGDKLKKLISEGWVP----------TEYSTSLKGFN 1244
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1079 QTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKME-EFRKEIETLKQAAAQK-SQQLSALqeeNVKLAEELGRSRD 1156
Cdd:COG5022 1245 NLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPaTINSLLQYINVGLFNAlRTKASSL---RWKSATEVNYNSE 1321
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1157 EVtSHQKLEEERSVLNNQLLEMKKRESKFIKDadeeKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKslhS 1236
Cdd:COG5022 1322 EL-DDWCREFEISDVDEELEELIQAVKVLQLL----KDDLNKLDELLDACYSLNPAEIQNLKSRYDPADKENNLPK---E 1393
|
650 660 670
....*....|....*....|....*....|....*..
gi 2217290422 1237 VVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNT 1273
Cdd:COG5022 1394 ILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEKS 1430
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
538-1285 |
3.69e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.06 E-value: 3.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 538 LKEHFGAREEThqkeikALYTATEKLSKENESLKSKLEHANKENSDV-IALWKS------KLETAIASHqqaMEELKVSF 610
Cdd:TIGR01612 1005 LKANLGKNKEN------MLYHQFDEKEKATNDIEQKIEDANKNIPNIeIAIHTSiyniidEIEKEIGKN---IELLNKEI 1075
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 611 SKGLGTETAEFAELKtqiEKMRLdyqheiENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDqHL 690
Cdd:TIGR01612 1076 LEEAEINITNFNEIK---EKLKH------YNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSEN-YI 1145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 691 VEMEDTLNKLQeaeiKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLldldalrkassegkSEMKKLRQQLEAAEKQIK 770
Cdd:TIGR01612 1146 DEIKAQINDLE----DVADKAISNDDPEEIEKKIENIVTKIDKKKNIY--------------DEIKKLLNEIAEIEKDKT 1207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 771 HLEIEKNAESSKASSITRelqgreLKLTNLQENLSEVSQVKETLE---KELQILKEKFAEASEEA---VSVQRSMqETVN 844
Cdd:TIGR01612 1208 SLEEVKGINLSYGKNLGK------LFLEKIDEEKKKSEHMIKAMEayiEDLDEIKEKSPEIENEMgieMDIKAEM-ETFN 1280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 845 KLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNS---SQLTKMNDELRLKE- 920
Cdd:TIGR01612 1281 ISHDDDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDINlylNEIANIYNILKLNKi 1360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 921 ----RDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYER 996
Cdd:TIGR01612 1361 kkiiDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDT 1440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 997 ATSETKTKHEEIL---QNLQKTLLDTEDKLKGAREE-NSGLLQELEELRKQADKAKAAQTAEDA--------MQIMEQMT 1064
Cdd:TIGR01612 1441 YFKNADENNENVLllfKNIEMADNKSQHILKIKKDNaTNDHDFNINELKEHIDKSKGCKDEADKnakaieknKELFEQYK 1520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1065 KEKTETLasledTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVE----NQKMEEFRKEIETLKQAAAQKSQ----- 1135
Cdd:TIGR01612 1521 KDVTELL-----NKYSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEaeksEQKIKEIKKEKFRIEDDAAKNDKsnkaa 1595
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1136 ---QLSALQEEN--VKLAEELGRSRDEVTSHQKLEEERSVL--NNQLLEMKKRESKF--IKDADEEKASLQKSISITSAL 1206
Cdd:TIGR01612 1596 idiQLSLENFENkfLKISDIKKKINDCLKETESIEKKISSFsiDSQDTELKENGDNLnsLQEFLESLKDQKKNIEDKKKE 1675
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 1207 LTEKDAELEKLRNEVTVLRgENASAKSLHSVVQTLESDKVKLELKVKNLELQLkenKRQLSSSSGNTDTQADEDERAQE 1285
Cdd:TIGR01612 1676 LDELDSEIEKIEIDVDQHK-KNYEIGIIEKIKEIAIANKEEIESIKELIEPTI---ENLISSFNTNDLEGIDPNEKLEE 1750
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
612-1066 |
7.15e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 53.62 E-value: 7.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 612 KGLGTETAEFAELKTQIEKMRldyqHEIENLQNQQDSERAAHAKEMEALRA-KLMKVIKEKENSLEAIRSKLDKAEdQHL 690
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELE----EELEELEAELEELREELEKLEKLLQLlPLYQELEALEAELAELPERLEELE-ERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 691 VEMEDTLNKLQEAEikvKELEVLQAKCNEQTKVIDNftSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIK 770
Cdd:COG4717 156 EELRELEEELEELE---AELAELQEELEELLEQLSL--ATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 771 HLEIEKNAEsskasSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKE 850
Cdd:COG4717 231 QLENELEAA-----ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAE 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 851 EqfnmlssdleklrenladMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKL 930
Cdd:COG4717 306 E------------------LQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 931 TKANENASFLQ---KSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEE 1007
Cdd:COG4717 368 LEQEIAALLAEagvEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEE 447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 1008 iLQNLQKTLLDTEDKLKGAREEN--SGLLQELEELRKQ-ADKAKAAQTAEDAMQIMEQMTKE 1066
Cdd:COG4717 448 -LEELREELAELEAELEQLEEDGelAELLQELEELKAElRELAEEWAALKLALELLEEAREE 508
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
747-1085 |
9.55e-07 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 53.68 E-value: 9.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 747 ASSEGKsemkklrQQLEAAEKQIKHLEIEKNAESSKASSitrELQGRELKlTNLQENLSEVSQVKETLEKELQILKEKFA 826
Cdd:NF012221 1536 ATSESS-------QQADAVSKHAKQDDAAQNALADKERA---EADRQRLE-QEKQQQLAAISGSQSQLESTDQNALETNG 1604
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 827 EASEEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKL----RENLADmeakfREKDEREEQLIKAKEKLENDIAEImkm 901
Cdd:NF012221 1605 QAQRDAILEeSRAVTKELTTLAQGLDALDSQATYAGESgdqwRNPFAG-----GLLDRVQEQLDDAKKISGKQLADA--- 1676
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 902 SGDNSSQLTKMNDELRLKERDVEelqlkltKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKElerklsdlEKKME 981
Cdd:NF012221 1677 KQRHVDNQQKVKDAVAKSEAGVA-------QGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQA--------ESDAN 1741
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 982 TSHNQCQElkaRYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELrKQADKAKAAQTAEDAMQIME 1061
Cdd:NF012221 1742 AAANDAQS---RGEQDASAAENKANQAQADAKGAKQDESDKPNRQGAAGSGLSGKAYSV-EGVAEPGSHINPDSPAAADG 1817
|
330 340
....*....|....*....|....*
gi 2217290422 1062 QMTKEKTE-TLASLEDTKQTNAKLQ 1085
Cdd:NF012221 1818 RFSEGLTEqEQEALEGATNAVNRLQ 1842
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
472-1072 |
1.41e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 52.83 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 472 SEKSRIMELEKDLALRVQEVAELRRRLE---SNKPAGDVDMSLSLLQEISSLQEKLEVTRTdhqreiTSLKEHFgaREET 548
Cdd:pfam07111 27 TQRPTVTMWEQDVSGDGQGPGRRGRSLElegSQALSQQAELISRQLQELRRLEEEVRLLRE------TSLQQKM--RLEA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 549 HQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQI 628
Cdd:pfam07111 99 QAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 629 EKMRLDYQHEIENL---QNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAE-DQHLVEMEDTLNKLQEAE 704
Cdd:pfam07111 179 NSLETKRAGEAKQLaeaQKEAELLRKQLSKTQEELEAQVTLVESLRKYVGEQVPPEVHSQTwELERQELLDTMQHLQEDR 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 705 IKVKE-LEVLQAKCNEQTKVI----------------------DNFTSQLKATEEKLLDLDALRKASS-EGKSEMKKLRQ 760
Cdd:pfam07111 259 ADLQAtVELLQVRVQSLTHMLalqeeeltrkiqpsdslepefpKKCRSLLNRWREKVFALMVQLKAQDlEHRDSVKQLRG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 761 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 840
Cdd:pfam07111 339 QVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMELSRAQEARRRQQQQTASAEEQLKFVVNAMSSTQIWLE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 841 ETVNKLHQKEEQF----NMLSSDLEKLRENLADMEAKFREKDEREEQ--LIKAKEKLENDIAEIMKMSGDNSSQLtkmND 914
Cdd:pfam07111 419 TTMTRVEQAVARIpslsNRLSYAVRKVHTIKGLMARKVALAQLRQEScpPPPPAPPVDADLSLELEQLREERNRL---DA 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 915 ELRLKERDVeelQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARY 994
Cdd:pfam07111 496 ELQLSAHLI---QQEVGRAREQGEAERQQLSEVAQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAASLRQELTQQQ 572
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 995 ERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLA 1072
Cdd:pfam07111 573 EIYGQALQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSLRQIQHRATQEK--ERNQELRRLQDEARKEEGQRLA 648
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
796-1025 |
1.42e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 796 KLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR 875
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 876 EKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR-----LKERdVEELQLKLTKANENASFLQKSIEDMTvK 950
Cdd:COG4942 101 AQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKylapaRREQ-AEELRADLAELAALRAELEAERAELE-A 178
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 951 AEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKG 1025
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
479-1220 |
1.61e-06 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 52.90 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 479 ELEKDLALRVQEVAELRRRLESNKPAGDVDMSLSLlqEISSLQEKLEVTR-------TDHQREITSLKEHFGAREEThQK 551
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQL--TIQALQDELRAQRdlnqllqQDFTTSPVDGEDKFSTPELT-EE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 552 EIKALYTATEKLSKENESLKSKLEHANKEnsdvIALWKSKLETAIASHQQAMEELKvsfSKGLGTETAEFAELKTQ---I 628
Cdd:pfam10174 117 NFRRLQSEHERQAKELFLLRKTLEEMELR----IETQKQTLGARDESIKKLLEMLQ---SKGLPKKSGEEDWERTRriaE 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 629 EKMRLDY------QHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQE 702
Cdd:pfam10174 190 AEMQLGHlevlldQKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTED 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 703 AEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLL----DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNA 778
Cdd:pfam10174 270 REEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLalqtKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDA 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 779 esskassITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKfaeaseeavsvqrsmqetvnkLHQKEEQFNMLSS 858
Cdd:pfam10174 350 -------LRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDM---------------------LDVKERKINVLQK 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 859 DLEKLRENLadmeakfREKDEREEQLIKAKEKLENDiaeimkmSGDNSSQLTKMNDELRLKERDVEELQLkltkanenas 938
Cdd:pfam10174 402 KIENLQEQL-------RDKDKQLAGLKERVKSLQTD-------SSNTDTALTTLEEALSEKERIIERLKE---------- 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 939 flQKSIEDmTVKAEQSQQEAAKKHeeekkelerklsDLEKKMETSHNQCQElkaryeRATSETKTKheEILQNLQKTLLD 1018
Cdd:pfam10174 458 --QRERED-RERLEELESLKKENK------------DLKEKVSALQPELTE------KESSLIDLK--EHASSLASSGLK 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1019 TEDKLKGAREEnsgLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENnLKN 1098
Cdd:pfam10174 515 KDSKLKSLEIA---VEQKKEECSKLENQLKKAHNAEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLLGI-LRE 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1099 VEELNKSKElltvenQKMEEFRKEIETLKQAAAQKSQQLSALQ-EENVKLAEELGRSRDEvtshqKLEEERSVLNNQLLE 1177
Cdd:pfam10174 591 VENEKNDKD------KKIAELESLTLRQMKEQNKKVANIKHGQqEMKKKGAQLLEEARRR-----EDNLADNSQQLQLEE 659
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 2217290422 1178 MKKRESKFIKDADEEKASLqksiSITSALLTEKDAELEKLRNE 1220
Cdd:pfam10174 660 LMGALEKTRQELDATKARL----SSTQQSLAEKDGHLTNLRAE 698
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
808-1055 |
1.91e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 1.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 808 SQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKA 887
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 888 KEKLENDIAEIMKMSGDNSSQLTKMndeLRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAkkheeekk 967
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLA---LLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA-------- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 968 elerklsDLEKKMETSHNQCQELKARYERATSEtKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKA 1047
Cdd:COG4942 168 -------ELEAERAELEALLAELEEERAALEAL-KAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
....*...
gi 2217290422 1048 KAAQTAED 1055
Cdd:COG4942 240 AERTPAAG 247
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
891-1233 |
2.36e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.38 E-value: 2.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 891 LENDIAEIMKMSG--------------DNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEdmtvKAEQSQQ 956
Cdd:TIGR02169 140 LQGDVTDFISMSPverrkiideiagvaEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE----KAERYQA 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 957 EAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQnLQKTLLDTEDKLKGAREENSGLLQE 1036
Cdd:TIGR02169 216 LLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEE-IEQLLEELNKKIKDLGEEEQLRVKE 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1037 -LEELrkQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKElltvenqK 1115
Cdd:TIGR02169 295 kIGEL--EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKE-------E 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1116 MEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKRESKFI---KD 1188
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRlqeeLQRLSEELADLNAAIAGIEAKINELEeekED 445
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2217290422 1189 ADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS 1233
Cdd:TIGR02169 446 KALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
366-1044 |
3.56e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 51.76 E-value: 3.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 366 QLLAERDLERAEVAKAtshvgEIEQELALARDGHDQHVLELEAKMDQLRTMVeAADREKVELLnqlEEEKRKVEDLqfRV 445
Cdd:pfam12128 271 ETLIASRQEERQETSA-----ELNQLLRTLDDQWKEKRDELNGELSAADAAV-AKDRSELEAL---EDQHGAFLDA--DI 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 446 EEesiTKGDLEQKSQISEDPENVatvsekSRIMELEKDLALRVQEVAELRRRLesnkpagdvdMSLSLLQEISSLQEKLE 525
Cdd:pfam12128 340 ET---AAADQEQLPSWQSELENL------EERLKALTGKHQDVTAKYNRRRSK----------IKEQNNRDIAGIKDKLA 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 526 VTRTDHQREITSLKEHFGAREETHQKEIKAlytATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIA-SHQQAME 604
Cdd:pfam12128 401 KIREARDRQLAVAEDDLQALESELREQLEA---GKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFdERIERAR 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 605 ELKVSFSKGLGTETAEFAELKTQIEKMrlDYQHEIENLQNQQDSERAAHAKEM-----EALRAKLMKVIKEKENSLEAI- 678
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQA--SEALRQASRRLEERQSALDELELQlfpqaGTLLHFLRKEAPDWEQSIGKVi 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 679 ------RSKLDKAEDQHLVEMEDTLN--KLQEAEIKVKEL----EVLQAKCNEQTKVIDNFTSQLKATEEKLLdldALRK 746
Cdd:pfam12128 556 spellhRTDLDPEVWDGSVGGELNLYgvKLDLKRIDVPEWaaseEELRERLDKAEEALQSAREKQAAAEEQLV---QANG 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 747 ASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKassITRELQGRELKLtnlQENLSEVSQVKETLEKELQILKEKFA 826
Cdd:pfam12128 633 ELEKASREETFARTALKNARLDLRRLFDEKQSEKDK---KNKALAERKDSA---NERLNSLEAQLKQLDKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 827 EASEEA-VSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLA--------DMEAKFREKDEREEQLIKAKEKLENDIAE 897
Cdd:pfam12128 707 EQKREArTEKQAYWQVVEGALDAQLAL---LKAAIAARRSGAKaelkaletWYKRDLASLGVDPDVIAKLKREIRTLERK 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 898 IMKMSGDN--------------SSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEdMTVKAEQSQQEAAKKHE 963
Cdd:pfam12128 784 IERIAVRRqevlryfdwyqetwLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLE-MERKASEKQQVRLSENL 862
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 964 EEKKELERKLSDLekKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDteDKLKGAREENSGLLQELEELRKQ 1043
Cdd:pfam12128 863 RGLRCEMSKLATL--KEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKKYVEH--FKNVIADHSGSGLAETWESLREE 938
|
.
gi 2217290422 1044 A 1044
Cdd:pfam12128 939 D 939
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
643-1227 |
4.45e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 51.33 E-value: 4.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 643 QNQQDSERAAHAKEMealRAKLMKVIKEKENSLEAIRSKLDKAED---QHLVEMEDTLNKLQEAEIKVKELEVLQAKCNE 719
Cdd:pfam01576 48 QLQAETELCAEAEEM---RARLAARKQELEEILHELESRLEEEEErsqQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 720 QTKVIDnftSQLKATEEKLLDLDalrkassEGKSEMKKLRQQLEaaeKQIKHLEIEKNAESSKASSITRELQGRELKLTN 799
Cdd:pfam01576 125 EKVTTE---AKIKKLEEDILLLE-------DQNSKLSKERKLLE---ERISEFTSNLAEEEEKAKSLSKLKNKHEAMISD 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 800 LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmLSSDLEKLRENLADMEAKFREKDE 879
Cdd:pfam01576 192 LEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEE---LQAALARLEEETAQKNNALKKIRE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 880 REEQLIKAKEKLENDIA---EIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 956
Cdd:pfam01576 269 LEAQISELQEDLESERAarnKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQ 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 957 EAAKKHEEEKKelerklsDLEKKMETSHNQCQELKARYERATSETKTKHEEiLQNLQKTLLDTEDKLKGAreenSGLLQE 1036
Cdd:pfam01576 349 EMRQKHTQALE-------ELTEQLEQAKRNKANLEKAKQALESENAELQAE-LRTLQQAKQDSEHKRKKL----EGQLQE 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1037 LEELRKQADKAKAaqtaeDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLkENNLKNVEELNKskelltvenqkm 1116
Cdd:pfam01576 417 LQARLSESERQRA-----ELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSL-ESQLQDTQELLQ------------ 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1117 EEFRKEIetlkqaaaQKSQQLSALQEENVKLAEELgrsRDEVTSHQKLEEERSVLNNQLLEMKKR---ESKFIKDADEEK 1193
Cdd:pfam01576 479 EETRQKL--------NLSTRLRQLEDERNSLQEQL---EEEEEAKRNVERQLSTLQAQLSDMKKKleeDAGTLEALEEGK 547
|
570 580 590
....*....|....*....|....*....|....
gi 2217290422 1194 ASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1227
Cdd:pfam01576 548 KRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
844-1316 |
6.83e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 50.51 E-value: 6.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 844 NKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDV 923
Cdd:pfam05557 16 NEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 924 EElqlKLTKANENASFLQKSIEDMTVKAEQSQQeaakkheeekkelerKLSDLEKKMETSHNQCQELKARYERAtsetkT 1003
Cdd:pfam05557 96 ES---QLADAREVISCLKNELSELRRQIQRAEL---------------ELQSTNSELEELQERLDLLKAKASEA-----E 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1004 KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQadKAKAAQTAEdamqiMEQMTKEKTETLASLEDTKQTNAK 1083
Cdd:pfam05557 153 QLRQNLEKQQSSLAEAEQRIKELEFEIQSQEQDSEIVKNS--KSELARIPE-----LEKELERLREHNKHLNENIENKLL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1084 LQNELDTLKeNNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQK-------SQQLSALQEENVKLAEELG---- 1152
Cdd:pfam05557 226 LKEEVEDLK-RKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlrspedlSRRIEQLQQREIVLKEENSslts 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1153 RSRDEVTSHQKLEEERSVLNNQLLEMKKReskfIKDADEEKASLQKSISITSallTEKDAELEKLRNEVTVLRGENASAK 1232
Cdd:pfam05557 305 SARQLEKARRELEQELAQYLKKIEDLNKK----LKRHKALVRRLQRRVLLLT---KERDGYRAILESYDKELTMSNYSPQ 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1233 SLHSVvqtLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDE----RAQESQQMIDFLNSVIVDLQRKNQDLK 1308
Cdd:pfam05557 378 LLERI---EEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERElqalRQQESLADPSYSKEEVDSLRRKLETLE 454
|
....*...
gi 2217290422 1309 MKVEMMSE 1316
Cdd:pfam05557 455 LERQRLRE 462
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
702-1286 |
7.32e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.49 E-value: 7.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 702 EAEIKVKElevlqAKCNEQTKVIDnftSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLE--IEKNAE 779
Cdd:pfam05483 98 EAELKQKE-----NKLQENRKIIE---AQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKetCARSAE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 780 SSKASSITRElQGRELKL---TNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVN-----------K 845
Cdd:pfam05483 170 KTKKYEYERE-ETRQVYMdlnNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINdkekqvsllliQ 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 846 LHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEE 925
Cdd:pfam05483 249 ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQ 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 926 L-------QLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKmETSHNQCQELKARYERAT 998
Cdd:pfam05483 329 LteekeaqMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKK-SSELEEMTKFKNNKEVEL 407
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 999 SETKT--KHEEILQNLQKTLLDTEDKLKGAREENSGLLQELE-ELRKQADKAKAAQTAED--AMQIMEQMTKEKTETLAS 1073
Cdd:pfam05483 408 EELKKilAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREkEIHDLEIQLTAIKTSEEhyLKEVEDLKTELEKEKLKN 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1074 LEDTKQTNaKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEEnvklaeeLGR 1153
Cdd:pfam05483 488 IELTAHCD-KLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREE-------FIQ 559
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1154 SRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEekaSLQKSISITSALLTEKDAELEKLRNEVTvlrgenASAKS 1233
Cdd:pfam05483 560 KGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCN---NLKKQIENKNKNIEELHQENKALKKKGS------AENKQ 630
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 2217290422 1234 LHSvvqtlesdkvkLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQES 1286
Cdd:pfam05483 631 LNA-----------YEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEK 672
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
355-825 |
1.38e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 355 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHvlELEAKMDQLRTMVEAADREKVELLNQLEEE 434
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 435 KRKVEDLQFRVEEESITKGDLEQKsqisedpENVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKpagdvdmslsll 514
Cdd:COG4717 159 RELEEELEELEAELAELQEELEEL-------LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQ------------ 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 515 QEISSLQEKLEvtrtdhqrEITSLKEHFGAREETHQKEIKALYTAT----EKLSKENESLKSKLEHANKENSDVIALWKS 590
Cdd:COG4717 220 EELEELEEELE--------QLENELEAAALEERLKEARLLLLIAAAllalLGLGGSLLSLILTIAGVLFLVLGLLALLFL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 591 KLETAIASHQQAMEELKvsfskgLGTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLMKVIKE 670
Cdd:COG4717 292 LLAREKASLGKEAEELQ------ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 671 KENsLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKaTEEKLLDLDALRKASSE 750
Cdd:COG4717 366 EEL-EQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALD-EEELEEELEELEEELEE 443
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 751 GKSEMKKLRQQLEAAEKQIKHLEieknaESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKF 825
Cdd:COG4717 444 LEEELEELREELAELEAELEQLE-----EDGELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1045-1305 |
1.38e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 1.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1045 DKAKAAQTAEDAMQIMEQMTKEktetlASLEDTKQTNAKLQNELDTLKennlknveelnksKELLTVEnQKMEEFRKE-- 1122
Cdd:COG3206 146 DPELAAAVANALAEAYLEQNLE-----LRREEARKALEFLEEQLPELR-------------KELEEAE-AALEEFRQKng 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1123 IETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEmkkreSKFIKDADEEKASLQKSISI 1202
Cdd:COG3206 207 LVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQ-----SPVIQQLRAQLAELEAELAE 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1203 TSALLTEKDAELEKLRNEVTVLRGEnaSAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDER 1282
Cdd:COG3206 282 LSARYTPNHPDVIALRAQIAALRAQ--LQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLERE 359
|
250 260
....*....|....*....|...
gi 2217290422 1283 AQESQQMIDFLnsvivdLQRKNQ 1305
Cdd:COG3206 360 VEVARELYESL------LQRLEE 376
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
742-955 |
1.50e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 742 DALRKASSEGKSEMKKLRQQLEAAEKQIKHLeieknAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQIL 821
Cdd:COG3206 171 EEARKALEFLEEQLPELRKELEEAEAALEEF-----RQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAAL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 822 KEKFAEASEEAVSVQRS--MQETVNKLHQKEEQFNMLSS-------DLEKLRENLADMEAKFREKDEREEQLIKAK-EKL 891
Cdd:COG3206 246 RAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEAQRILASLEAElEAL 325
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 892 ENDIAEIMKMSGDNSSQLTKMNDelrlKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ 955
Cdd:COG3206 326 QAREASLQAQLAQLEARLAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEALTV 385
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
352-580 |
1.56e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 352 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARdghdQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----RRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 432 EEEKRKVEDL---QFRVEEESITKGDLEQKS--QISEDPENVATVSE--KSRIMELEKDLalrvQEVAELRRRLESNKPA 504
Cdd:COG4942 100 EAQKEELAELlraLYRLGRQPPLALLLSPEDflDAVRRLQYLKYLAParREQAEELRADL----AELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217290422 505 GDvdmslSLLQEISSLQEKLEVTRTDHQREITSLKehfgAREETHQKEIKALYTATEKLSKENESLKSKLEHANKE 580
Cdd:COG4942 176 LE-----ALLAELEEERAALEALKAERQKLLARLE----KELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
656-941 |
2.53e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.97 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 656 EMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDtlNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATE 735
Cdd:pfam17380 267 ENEFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKE--EKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 736 EKLLDLDALRKasSEGKSEMKKLRQQLEAAE-KQIKHLEIEKNAESSKASSITRELQG-RELKLT------NLQENLSEV 807
Cdd:pfam17380 345 ERERELERIRQ--EERKRELERIRQEEIAMEiSRMRELERLQMERQQKNERVRQELEAaRKVKILeeerqrKIQQQKVEM 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 808 SQVK----ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFR-----EKD 878
Cdd:pfam17380 423 EQIRaeqeEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkilekELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 879 EREEQLIKAKEK---LENDIAEimKMSGDNSSQLTKMNDELRLKERDVEE---LQLKLTKANENASFLQ 941
Cdd:pfam17380 503 ERKQAMIEEERKrklLEKEMEE--RQKAIYEEERRREAEEERRKQQEMEErrrIQEQMRKATEERSRLE 569
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
740-1142 |
3.03e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.80 E-value: 3.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 740 DLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESS------KASSITRELQGRELKLTNLQENLSEVSQVKET 813
Cdd:COG3096 293 ELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDhlnlvqTALRQQEKIERYQEDLEELTERLEEQEEVVEE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 814 LEKELQILKEKFAEASEEAVSVQRSM---QETVNKLHQKEEQFNMLSSDLEKLR----------ENLADMEAKFREK-DE 879
Cdd:COG3096 373 AAEQLAEAEARLEAAEEEVDSLKSQLadyQQALDVQQTRAIQYQQAVQALEKARalcglpdltpENAEDYLAAFRAKeQQ 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 880 REEQLIKAKEKLenDIAEIMKMSGDNSSQL-TKMNDElrlkerdVEELQlkltkANENASFLQKSIEDMTVKAEQSQQEA 958
Cdd:COG3096 453 ATEEVLELEQKL--SVADAARRQFEKAYELvCKIAGE-------VERSQ-----AWQTARELLRRYRSQQALAQRLQQLR 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 959 AKKheeekkelerklSDLEKKMEtSHNQCQELKARYERATSETKTKHEEI---LQNLQKTLLDTEDKLKGAREENSGLLQ 1035
Cdd:COG3096 519 AQL------------AELEQRLR-QQQNAERLLEEFCQRIGQQLDAAEELeelLAELEAQLEELEEQAAEAVEQRSELRQ 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1036 ELEELRKQ----ADKAKAAQTAEDAMQIMEQMTKEktetlaSLEDTKQTNAKLQNELDTLKennlknveELNKSKELLtv 1111
Cdd:COG3096 586 QLEQLRARikelAARAPAWLAAQDALERLREQSGE------ALADSQEVTAAMQQLLERER--------EATVERDEL-- 649
|
410 420 430
....*....|....*....|....*....|.
gi 2217290422 1112 eNQKMEEFRKEIETLKQAAAQKSQQLSALQE 1142
Cdd:COG3096 650 -AARKQALESQIERLSQPGGAEDPRLLALAE 679
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
675-1308 |
4.81e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 4.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 675 LEAIRSKLDKAEdQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD--LDALRKASSEGK 752
Cdd:pfam12128 236 IMKIRPEFTKLQ-QEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKekRDELNGELSAAD 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 753 SEMKKLRQQLEAAEKQIKHLEiEKNAESSKASsitrelqgrelkltnlQENLSEVSQVKETLEKELQILKEKfaeaseea 832
Cdd:pfam12128 315 AAVAKDRSELEALEDQHGAFL-DADIETAAAD----------------QEQLPSWQSELENLEERLKALTGK-------- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 833 vsvQRSMQETVNKLHQKEEQFNmlSSDLEKLRENLADM-EAKFREKDEREEQLikakEKLENDIAEIMKmsgdnsSQLTK 911
Cdd:pfam12128 370 ---HQDVTAKYNRRRSKIKEQN--NRDIAGIKDKLAKIrEARDRQLAVAEDDL----QALESELREQLE------AGKLE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 912 MNDELRLKERDVEELQLKLTKAN-ENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQC--- 987
Cdd:pfam12128 435 FNEEEYRLKSRLGELKLRLNQATaTPELLLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQAsrr 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 988 -QELKARYERATSETKTKHEEILQNLQKTLLDTED----------------------------------KLKGAREENSG 1032
Cdd:pfam12128 515 lEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQsigkvispellhrtdldpevwdgsvggelnlygvKLDLKRIDVPE 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1033 LLQELEELRKQADKAKAA-QTAED-AMQIMEQMTKEKTET-LASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELL 1109
Cdd:pfam12128 595 WAASEEELRERLDKAEEAlQSAREkQAAAEEQLVQANGELeKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALA 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1110 TVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERsvLNNQLLEMKKRESKFIKDA 1189
Cdd:pfam12128 675 ERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLAL--LKAAIAARRSGAKAELKAL 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1190 DEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQ-TLESDKVKLELKVKNLELQLKENKRQLSS 1268
Cdd:pfam12128 753 ETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQeTWLQRRPRLATQLSNIERAISELQQQLAR 832
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 2217290422 1269 SSGNTDTQADEDER---AQESQQM-IDFLNSVIVDLQRKNQDLK 1308
Cdd:pfam12128 833 LIADTKLRRAKLEMerkASEKQQVrLSENLRGLRCEMSKLATLK 876
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
471-921 |
5.21e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.02 E-value: 5.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 471 VSEKSRIMELEKDLAlrvqEVAELRRRLESnkpagDVDMS---LSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREE 547
Cdd:COG3096 302 AEEQYRLVEMARELE----ELSARESDLEQ-----DYQAAsdhLNLVQTALRQQEKIERYQEDLEELTERLEEQEEVVEE 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 548 TH--QKEIKALYTATEKlskENESLKSKLehankensdviALWKSKLET----AIASHQ--QAMEELKVSFskGLGTETA 619
Cdd:COG3096 373 AAeqLAEAEARLEAAEE---EVDSLKSQL-----------ADYQQALDVqqtrAIQYQQavQALEKARALC--GLPDLTP 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 620 EFAELKTQIEKMRLDYQHEiENLQNQQ-----DSERAAHAKEMEALRAKLMKVikEKENSLEAIRSKLDKAEDQ------ 688
Cdd:COG3096 437 ENAEDYLAAFRAKEQQATE-EVLELEQklsvaDAARRQFEKAYELVCKIAGEV--ERSQAWQTARELLRRYRSQqalaqr 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 689 ------HLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLkatEEKLLDLDALRKASSEGKSEMkklRQQL 762
Cdd:COG3096 514 lqqlraQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAEL---EAQLEELEEQAAEAVEQRSEL---RQQL 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 763 EAAEKQIKHLEieknaessKASSITRELQGRelkLTNLQEnlsevsQVKETLekelqilkekfaeasEEAVSVQRSMQET 842
Cdd:COG3096 588 EQLRARIKELA--------ARAPAWLAAQDA---LERLRE------QSGEAL---------------ADSQEVTAAMQQL 635
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 843 VNKLHQKEeqfnmlssdleklrenladmeakfREKDereeQLIKAKEKLENDIAEIMKMSGDNSSQLtkmndeLRLKER 921
Cdd:COG3096 636 LEREREAT------------------------VERD----ELAARKQALESQIERLSQPGGAEDPRL------LALAER 680
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
619-1118 |
5.27e-05 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 47.81 E-value: 5.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 619 AEFAELKTQIEKMRLDY-QHEIENLQNQQDSERAAHA---------KEMEALRAKLMKVIKEKENSLEAIRSKLDKAEdQ 688
Cdd:pfam05557 2 AELIESKARLSQLQNEKkQMELEHKRARIELEKKASAlkrqldresDRNQELQKRIRLLEKREAEAEEALREQAELNR-L 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 689 HLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQT----KVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEA 764
Cdd:pfam05557 81 KKKYLEALNKKLNEKESQLADAREVISCLKNELselrRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 765 -------AEKQIKHLEIEkNAESSKASSITRELQGRELKLTNLQ----------ENLSEVSQVKETLEKELQILK---EK 824
Cdd:pfam05557 161 qqsslaeAEQRIKELEFE-IQSQEQDSEIVKNSKSELARIPELEkelerlrehnKHLNENIENKLLLKEEVEDLKrklER 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 825 FAEASEEAVSVQRSMQETVNKLHQKEEQFNM----------LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 894
Cdd:pfam05557 240 EEKYREEAATLELEKEKLEQELQSWVKLAQDtglnlrspedLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQE 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 895 IAEIMKmsgdnssQLTKMNDELRLKERDVEELQLKLTKANENASFLQ---KSIEDMTVKAEQSQQEAAKKHE-------- 963
Cdd:pfam05557 320 LAQYLK-------KIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRailESYDKELTMSNYSPQLLERIEEaedmtqkm 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 964 -EEKKELERKLSDLEKKMETSHNQCQ----ELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELE 1038
Cdd:pfam05557 393 qAHNEEMEAQLSVAEEELGGYKQQAQtlerELQALRQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELE 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1039 ELRKQAD----KAKAAQTAEDAMQIMEQMTKEKTETL-ASLEDTKQTNAKLQNELD-------TLKENNLKNVEELNKSK 1106
Cdd:pfam05557 473 RRCLQGDydpkKTKVLHLSMNPAAEAYQQRKNQLEKLqAEIERLKRLLKKLEDDLEqvlrlpeTTSTMNFKEVLDLRKEL 552
|
570
....*....|..
gi 2217290422 1107 ELLTVENQKMEE 1118
Cdd:pfam05557 553 ESAELKNQRLKE 564
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1040-1247 |
6.94e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.08 E-value: 6.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1040 LRKQADKAKAAQTAEDAMQIMEQMTKE-KTETLASLEDTKQTNAKLQNELD---TLKENNLKNVEE--------LNKSKE 1107
Cdd:PRK12704 24 VRKKIAEAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEIHKLRNEFEkelRERRNELQKLEKrllqkeenLDRKLE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1108 LLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL-GRSRDEVTshqkleeersvlnNQLLEMKKRESKfi 1186
Cdd:PRK12704 104 LLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERIsGLTAEEAK-------------EILLEKVEEEAR-- 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 1187 kdadEEKASLQKSIsitsalltEKDAELE--KLRNEVTVL---R--GENASAKSLhSVVqTLESDKVK 1247
Cdd:PRK12704 169 ----HEAAVLIKEI--------EEEAKEEadKKAKEILAQaiqRcaADHVAETTV-SVV-NLPNDEMK 222
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
387-823 |
8.16e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 8.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 387 EIEQELALARDGHDQHvLELEAKMDQL---RTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISE 463
Cdd:PRK01156 326 AIIKKLSVLQKDYNDY-IKKKSRYDDLnnqILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDP 404
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 464 DPENVATVSEKSRIMELEKDLALRVQEVAELRRRLesnkpagdvdMSLSLLQEISSLQEKLEVTRTDHQRE-ITSLKEHF 542
Cdd:PRK01156 405 DAIKKELNEINVKLQDISSKVSSLNQRIRALRENL----------DELSRNMEMLNGQSVCPVCGTTLGEEkSNHIINHY 474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 543 GAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIAShqqaMEELKVSFSKgLGTETAEFA 622
Cdd:PRK01156 475 NEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARAD----LEDIKIKINE-LKDKHDKYE 549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 623 ELKTQIEKMRLdyqheiENLQNQQDSERAAHAK----EMEALRAK---LMKVIKEKENSLEAIRSKLDKAE---DQHLVE 692
Cdd:PRK01156 550 EIKNRYKSLKL------EDLDSKRTSWLNALAVisliDIETNRSRsneIKKQLNDLESRLQEIEIGFPDDKsyiDKSIRE 623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 693 MEDTLNKLQEaeiKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAekqikhl 772
Cdd:PRK01156 624 IENEANNLNN---KYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDA------- 693
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2217290422 773 eiekNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE 823
Cdd:PRK01156 694 ----KANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKR 740
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
756-917 |
9.21e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 46.69 E-value: 9.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 756 KKLRQQLEAAEKQIKHL--EIEKNAESSKassitrelqgrELKLTNLQEnlsEVSQVKETLEKELQILKEKFAEaseeav 833
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRIleEAKKEAEAIK-----------KEALLEAKE---EIHKLRNEFEKELRERRNELQK------ 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 834 svqrsmQEtvNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREK----DEREEQLIKAKEKLENDIAEIMKMSGDNSSQ- 908
Cdd:PRK12704 87 ------LE--KRLLQKEENLDRKLELLEKREEELEKKEKELEQKqqelEKKEEELEELIEEQLQELERISGLTAEEAKEi 158
|
170
....*....|
gi 2217290422 909 -LTKMNDELR 917
Cdd:PRK12704 159 lLEKVEEEAR 168
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
356-499 |
1.07e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.77 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 356 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD 421
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 422 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdlEQKSQISEDPEnvaTVSEKSRIMELEKDLALRVQEVAELRRRLE 499
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-----EERREIRKDRE---ISRLDREIERLERELEEERERIEELKRKLE 496
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1343-1360 |
1.22e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 40.14 E-value: 1.22e-04
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
1093-1341 |
1.29e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.49 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1093 ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA----AQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEER 1168
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLEKlgenAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKAT 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1169 SVLNNQLLEMKKrESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKS---LHSVVQTLESDK 1245
Cdd:COG5185 312 ESLEEQLAAAEA-EQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSseeLDSFKDTIESTK 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1246 VKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAqesqqmIDFLNSVIVDLQRKNQDL-KMKVEMMSEAALNGNGD 1324
Cdd:COG5185 391 ESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQ------IEQATSSNEEVSKLLNELiSELNKVMREADEESQSR 464
|
250
....*....|....*..
gi 2217290422 1325 DLNNYDSDDQEKQSKKK 1341
Cdd:COG5185 465 LEEAYDEINRSVRSKKE 481
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
514-926 |
1.58e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 514 LQEISSLQEKLEVTRTDHQ--REITSLKEHFGAREETHQKEIKALYTATEKLSK--ENESLKSKLEHANKENSDVIALWK 589
Cdd:COG4717 70 LKELKELEEELKEAEEKEEeyAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 590 sKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKLmkviK 669
Cdd:COG4717 150 -ELEERLEELRELEEELE--------ELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEEL----E 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 670 EKENSLEAIRSKLDKAEDQHlvEMEDTLNKLQEAEIKVK---ELEVLQAKCNEQTKVIDNFTSQLKATEEkLLDLDALRK 746
Cdd:COG4717 217 EAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLiaaALLALLGLGGSLLSLILTIAGVLFLVLG-LLALLFLLL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 747 ASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGREL--KLTNLQENLSEVSQVKETL-----EKELQ 819
Cdd:COG4717 294 AREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELldRIEELQELLREAEELEEELqleelEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 820 ILKEKFAEASEEA----VSVQRSMQETVNKLHQKEEQFN---------MLSSDLEKLRENLADMEAKFREKDEREEQLIK 886
Cdd:COG4717 374 ALLAEAGVEDEEElraaLEQAEEYQELKEELEELEEQLEellgeleelLEALDEEELEEELEELEEELEELEEELEELRE 453
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2217290422 887 AKEKLENDIAEIMkmsgdNSSQLTKMNDELRLKERDVEEL 926
Cdd:COG4717 454 ELAELEAELEQLE-----EDGELAELLQELEELKAELREL 488
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
856-1213 |
1.58e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.50 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 856 LSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANE 935
Cdd:pfam02463 147 IAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYL 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 936 NASFLQKSIEdmtvKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQcQELKARYERATSETKTKHEEILQNLQKT 1015
Cdd:pfam02463 227 LYLDYLKLNE----ERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKE-NKEEEKEKKLQEEELKLLAKEEEELKSE 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1016 LLDTEDKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1095
Cdd:pfam02463 302 LLKLERRKVDDEEKLKESEKEKKKAEKELKKEK--EEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1096 LKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL 1175
Cdd:pfam02463 380 KLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350
....*....|....*....|....*....|....*...
gi 2217290422 1176 LEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAE 1213
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEE 497
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
351-1095 |
1.71e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.32 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlARDGHDQHVLELEAKMDQLRTMVEaadREKVELLNQ 430
Cdd:pfam01576 260 NNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELE-ALKTELEDTLDTTAAQQELRSKRE---QEVTELKKA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 431 LEEEKRK---------------VEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKS---RIMELEKDLALRVQEVA 492
Cdd:pfam01576 336 LEEETRSheaqlqemrqkhtqaLEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTlqqAKQDSEHKRKKLEGQLQ 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 493 ELRRRL-ESNKPAGDVDMSLSLLQ----EISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIK---ALYTATEKLS 564
Cdd:pfam01576 416 ELQARLsESERQRAELAEKLSKLQseleSVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRqklNLSTRLRQLE 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 565 KENESLKSKLEHANKEnsdvialwKSKLETAIASHQQAMEELKvsfskglgTETAEFAELKTQIEKMRLDYQHEIENLqN 644
Cdd:pfam01576 496 DERNSLQEQLEEEEEA--------KRNVERQLSTLQAQLSDMK--------KKLEEDAGTLEALEEGKKRLQRELEAL-T 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 645 QQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRS------KLDKAEDQHLVEMEDTLNKLQ------EAEIKVKELEV 712
Cdd:pfam01576 559 QQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQlvsnleKKQKKFDQMLAEEKAISARYAeerdraEAEAREKETRA 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 713 LQ--AKCNEQTKVIDNFTSQLKATEEKLLDL----DALRKASSEGKSEMKKLRQQLEAAEKQIKHLE------------I 774
Cdd:pfam01576 639 LSlaRALEEALEAKEELERTNKQLRAEMEDLvsskDDVGKNVHELERSKRALEQQVEEMKTQLEELEdelqatedaklrL 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 775 EKNAESSKAsSITRELQGRELKltNLQENLSEVSQVKEtLEKELQ--------------ILKEKFAEASEEAVSVQRSMQ 840
Cdd:pfam01576 719 EVNMQALKA-QFERDLQARDEQ--GEEKRRQLVKQVRE-LEAELEderkqraqavaakkKLELDLKELEAQIDAANKGRE 794
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 841 ETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDER----EEQLIKAKEKL----------ENDIAEIMKMSGDNS 906
Cdd:pfam01576 795 EAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKlknlEAELLQLQEDLaaserarrqaQQERDELADEIASGA 874
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 907 SQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKelerklsdLEKKMETSHNQ 986
Cdd:pfam01576 875 SGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQK--------SESARQQLERQ 946
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 987 CQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSG--------------LLQELEELRKQADKAKaaQT 1052
Cdd:pfam01576 947 NKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAanklvrrtekklkeVLLQVEDERRHADQYK--DQ 1024
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 2217290422 1053 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENN 1095
Cdd:pfam01576 1025 AEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRELDDATESN 1067
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
336-666 |
1.77e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 336 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALARDGHDQhVLELEAKMDQLRT 415
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 416 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQIsedpenvatvseksrimELEKDLALRVQEVAELR 495
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARL-----------------ELRALLEERFAAALGDA 762
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 496 RRLEsnkpagdvdMSLSLLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSK-ENESL---K 571
Cdd:COG4913 763 VERE---------LRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRlEEDGLpeyE 833
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 572 SKLEHANKENSDV-IALWKSKLETAIASHQQAMEEL-----KVSFSKG----LGTETAEFAELKtqiekmrlDYQHEI-- 639
Cdd:COG4913 834 ERFKELLNENSIEfVADLLSKLRRAIREIKERIDPLndslkRIPFGPGrylrLEARPRPDPEVR--------EFRQELra 905
|
330 340
....*....|....*....|....*....
gi 2217290422 640 --ENLQNQQDSERAAHAKEMEALRAKLMK 666
Cdd:COG4913 906 vtSGASLFDEELSEARFAALKRLIERLRS 934
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1004-1194 |
1.85e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 46.07 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1004 KHEEILQNLQKtLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQImEQMTKEKTETLASLEDTKQtnaK 1083
Cdd:PRK05771 44 RLRKLRSLLTK-LSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKI-EKEIKELEEEISELENEIK---E 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1084 LQNELDTLK-----------------------------------ENNLKNVEELNKSKE----LLTVENQKMEEFRKEIE 1124
Cdd:PRK05771 119 LEQEIERLEpwgnfdldlslllgfkyvsvfvgtvpedkleelklESDVENVEYISTDKGyvyvVVVVLKELSDEVEEELK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1125 -------------TLKQAAAQKSQQLSALQEENVKLAEELGRSRdevtshQKLEEERSVLNNQLLEMKKRESKFIKDADE 1191
Cdd:PRK05771 199 klgferleleeegTPSELIREIKEELEEIEKERESLLEELKELA------KKYLEELLALYEYLEIELERAEALSKFLKT 272
|
...
gi 2217290422 1192 EKA 1194
Cdd:PRK05771 273 DKT 275
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
401-1047 |
1.85e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 401 QHVLELEAKMDQLRTMVEAADrEKVELLNQLEEEKRKVEDLQfrveeesitkgdleqksQISEDPENVAtvSEKSRIMEL 480
Cdd:COG4913 215 EYMLEEPDTFEAADALVEHFD-DLERAHEALEDAREQIELLE-----------------PIRELAERYA--AARERLAEL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 481 EKDLALRVQEVAELRRRLesnkpagdvdmslsLLQEISSLQEKLEvtrtDHQREITSLKehfgAREETHQKEIKALYTAT 560
Cdd:COG4913 275 EYLRAALRLWFAQRRLEL--------------LEAELEELRAELA----RLEAELERLE----ARLDALREELDELEAQI 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 561 EKLSKEN-ESLKSKLEHANKEnsdvialwKSKLETAIASHQQAMEELKVSfskgLGTETAEFAELKTQIEKMRLDYQHEI 639
Cdd:COG4913 333 RGNGGDRlEQLEREIERLERE--------LEERERRRARLEALLAALGLP----LPASAEEFAALRAEAAALLEALEEEL 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 640 ENLQNQQDSERAAHAKEMEALRAklmkviKEKE-NSLEAIRSKLdkaeDQHLVEMEDTLNklQEAEIKVKEL----EVLQ 714
Cdd:COG4913 401 EALEEALAEAEAALRDLRRELRE------LEAEiASLERRKSNI----PARLLALRDALA--EALGLDEAELpfvgELIE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 715 AKCNEQ---------------------------TKVIDN--FTSQLKATEEKLLDLDALRKASSEG-------------- 751
Cdd:COG4913 469 VRPEEErwrgaiervlggfaltllvppehyaaaLRWVNRlhLRGRLVYERVRTGLPDPERPRLDPDslagkldfkphpfr 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 752 ---KSEMKKLR--------QQLEAAEK------QIKHLEI--EKNAESSKAS------SITRELQGRELKLTNLQENLSE 806
Cdd:COG4913 549 awlEAELGRRFdyvcvdspEELRRHPRaitragQVKGNGTrhEKDDRRRIRSryvlgfDNRAKLAALEAELAELEEELAE 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 807 VSQVKETLEKELQILKEKFAEAS--EEAVSVQRSMQETVNKLHQKEEQFNML---SSDLEKLRENLADMEAKFREKDERE 881
Cdd:COG4913 629 AEERLEALEAELDALQERREALQrlAEYSWDEIDVASAEREIAELEAELERLdasSDDLAALEEQLEELEAELEELEEEL 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 882 EQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQeaakk 961
Cdd:COG4913 709 DELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLN----- 783
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 962 heeekkeleRKLSDLEKKMETsHNQCQELKARYERATSETKTKHEEILQNLQKT-LLDTEDKLKGAREENSGllQELEEL 1040
Cdd:COG4913 784 ---------RAEEELERAMRA-FNREWPAETADLDADLESLPEYLALLDRLEEDgLPEYEERFKELLNENSI--EFVADL 851
|
....*..
gi 2217290422 1041 RKQADKA 1047
Cdd:COG4913 852 LSKLRRA 858
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
865-1265 |
1.93e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 865 ENLADMEAKFREKDEREEQLIKAKEKLENDIAEImkmsgdnssqltkmnDELRLKERDVEELQLKLTKANENASFLQKSI 944
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEEL---------------EELEAELEELREELEKLEKLLQLLPLYQELE 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 945 E-DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKL 1023
Cdd:COG4717 136 AlEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1024 KGAREENSGLLQELEELRKQADKAKAAQTAEDAMQI--------------------------------------MEQMTK 1065
Cdd:COG4717 216 EEAQEELEELEEELEQLENELEAAALEERLKEARLLlliaaallallglggsllsliltiagvlflvlgllallFLLLAR 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1066 EKTETLASLEDTKQ-------TNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQlS 1138
Cdd:COG4717 296 EKASLGKEAEELQAlpaleelEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA-A 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1139 ALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEkaSLQKSISITSALLTEKDAELEKLR 1218
Cdd:COG4717 375 LLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEELEEELEELR 452
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2217290422 1219 NEVTVLRGEnasakslhsvVQTLESDK--VKLELKVKNLELQLKENKRQ 1265
Cdd:COG4717 453 EELAELEAE----------LEQLEEDGelAELLQELEELKAELRELAEE 491
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
628-1107 |
1.96e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 45.97 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 628 IEKMRLDYQHEIENLQNQQD---SERAAHAKEMEALR--AKLMKV--------IKEKENSLEAIRSKLDKAEDQ------ 688
Cdd:pfam10174 245 LERNIRDLEDEVQMLKTNGLlhtEDREEEIKQMEVYKshSKFMKNkidqlkqeLSKKESELLALQTKLETLTNQnsdckq 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 689 HLVEMEDTLN-KLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLK-ATEEKlldldalrkasSEGKSEMKKLRQQLEAAE 766
Cdd:pfam10174 325 HIEVLKESLTaKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQdLTEEK-----------STLAGEIRDLKDMLDVKE 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 767 KQIKHLEieknaesSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASE--EAVSVQRSMQEtvn 844
Cdd:pfam10174 394 RKINVLQ-------KKIENLQEQLRDKDKQLAGLKERVKSLQTDSSNTDTALTTLEEALSEKERiiERLKEQRERED--- 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 845 klHQKEEQFNMLSSDLEKLRENLADMEakfREKDEREEQLIKAKEKLENDIAEIMKmsgdNSSQLTKMNDELRLKERDVE 924
Cdd:pfam10174 464 --RERLEELESLKKENKDLKEKVSALQ---PELTEKESSLIDLKEHASSLASSGLK----KDSKLKSLEIAVEQKKEECS 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 925 ELQLKLTKANENASFLQKSiEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLE--KKMETSHNQCQELKARYERATSETK 1002
Cdd:pfam10174 535 KLENQLKKAHNAEEAVRTN-PEINDRIRLLEQEVARYKEESGKAQAEVERLLGilREVENEKNDKDKKIAELESLTLRQM 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1003 TKHEEILQNLQktLLDTEDKLKGAreensGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNA 1082
Cdd:pfam10174 614 KEQNKKVANIK--HGQQEMKKKGA-----QLLEEARRREDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLA 686
|
490 500
....*....|....*....|....*
gi 2217290422 1083 KLQNELDTLKENNLKNVEELNKSKE 1107
Cdd:pfam10174 687 EKDGHLTNLRAERRKQLEEILEMKQ 711
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
623-862 |
2.25e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.78 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 623 ELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALrAKLMKVIKEKENSLEAIRSKLDKAEDQ---HLVEMEDT--- 696
Cdd:PHA02562 178 ELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENI-ARKQNKYDELVEEAKTIKAEIEELTDEllnLVMDIEDPsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 697 LNKLQEAEIKVK-ELEVLQ--AKCNEQTKVIDNFTSQLKATEEKLldldalrkasSEGKSEMKKLRQQLEAAEKQIKHLE 773
Cdd:PHA02562 257 LNKLNTAAAKIKsKIEQFQkvIKMYEKGGVCPTCTQQISEGPDRI----------TKIKDKLKELQHSLEKLDTAIDELE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 774 iEKNAESSKASSITRELQGrelKLTNLQENLS-EVSQVKEtLEKELQILKEKFAEASEEAVSVQRSMQETVNKL--HQKE 850
Cdd:PHA02562 327 -EIMDEFNEQSKKLLELKN---KISTNKQSLItLVDKAKK-VKAAIEELQAEFVDNAEELAKLQDELDKIVKTKseLVKE 401
|
250
....*....|..
gi 2217290422 851 EQFNMLSSDLEK 862
Cdd:PHA02562 402 KYHRGIVTDLLK 413
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
709-1264 |
3.33e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 45.28 E-value: 3.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 709 ELEVLQAKCNEQTKVIDNFTSQLKateekllDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSkassitr 788
Cdd:PRK01156 160 EINSLERNYDKLKDVIDMLRAEIS-------NIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSI------- 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 789 ELQGRELKLTNLQENLSEVSQVKET---LEKELQILKEKFAEASEEAV----SVQRSMQETVNKLHQKEEQFN---MLSS 858
Cdd:PRK01156 226 EYNNAMDDYNNLKSALNELSSLEDMknrYESEIKTAESDLSMELEKNNyykeLEERHMKIINDPVYKNRNYINdyfKYKN 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 859 DLEKLRENLADMEAKFREKDEreeqLIKAKEKLENDIAEIMKMSgdnssqltKMNDELRLKERDVEELQLKLTKANENAS 938
Cdd:PRK01156 306 DIENKKQILSNIDAEINKYHA----IIKKLSVLQKDYNDYIKKK--------SRYDDLNNQILELEGYEMDYNSYLKSIE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 939 FLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEK---KMETSHNQCQELKARYE--RATSETKTKHEEILQNLQ 1013
Cdd:PRK01156 374 SLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEinvKLQDISSKVSSLNQRIRalRENLDELSRNMEMLNGQS 453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1014 K-----TLLDTE---DKLKGAREENSGLLQELEELRKQADKAKaaQTAEDAMQIMEQMTKEKTETLAS----LEDTKQTN 1081
Cdd:PRK01156 454 VcpvcgTTLGEEksnHIINHYNEKKSRLEEKIREIEIEVKDID--EKIVDLKKRKEYLESEEINKSINeynkIESARADL 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1082 AKLQNELDTLKENNLKNVEELNKSKEL-LTVENQKMEEFRK--------EIETLKQAAAQKSQQLSALQEENVKLAEELG 1152
Cdd:PRK01156 532 EDIKIKINELKDKHDKYEEIKNRYKSLkLEDLDSKRTSWLNalavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFP 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1153 RSRDEVTSH-QKLEEERSVLNNQ--LLEMKKRE----SKFIKDADEEKA---SLQKSISITSALLTEKDAELEKLRNEvt 1222
Cdd:PRK01156 612 DDKSYIDKSiREIENEANNLNNKynEIQENKILieklRGKIDNYKKQIAeidSIIPDLKEITSRINDIEDNLKKSRKA-- 689
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2217290422 1223 vLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKR 1264
Cdd:PRK01156 690 -LDDAKANRARLESTIEILRTRINELSDRINDINETLESMKK 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1064-1266 |
3.41e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 3.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1064 TKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEE 1143
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1144 NVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTV 1223
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2217290422 1224 LRGENASAKslhsvvQTLESDKVKLELKVKNLELQLKENKRQL 1266
Cdd:COG4942 179 LLAELEEER------AALEALKAERQKLLARLEKELAELAAEL 215
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
936-1317 |
4.16e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 45.13 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 936 NASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKT 1015
Cdd:PTZ00121 1073 KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAK 1152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1016 LLDTEDKLKGAREENSGLLQE----LEELRK--QADKAKAAQTAEDAMQIMEQMTKE---KTETLASLEDTKQTNAKLQN 1086
Cdd:PTZ00121 1153 RVEIARKAEDARKAEEARKAEdakkAEAARKaeEVRKAEELRKAEDARKAEAARKAEeerKAEEARKAEDAKKAEAVKKA 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1087 ELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSalQEENVKLAEELGRS---RDEVTSHQK 1163
Cdd:PTZ00121 1233 EEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELK--KAEEKKKADEAKKAeekKKADEAKKK 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1164 LEEERsvlnnQLLEMKKRESKFIKDADEEKASLQKSisitsalltEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLES 1243
Cdd:PTZ00121 1311 AEEAK-----KADEAKKKAEEAKKKADAAKKKAEEA---------KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA 1376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 1244 DKVKLELKVKNLElqlKENKRQLSSSSGNTDTQADEDERAQESQQMIDFLNSViVDLQRKNQDLKMKVEMMSEA 1317
Cdd:PTZ00121 1377 KKKADAAKKKAEE---KKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK-AEEKKKADEAKKKAEEAKKA 1446
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
421-898 |
4.17e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.07 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 421 DREKVELL---NQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVSEKSRIMELEKDLALRVQEVAELRRR 497
Cdd:COG5022 857 AKKRFSLLkkeTIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKL 936
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 498 LE-------SNKPAGDVDMSLSLLQEISSLQEKLEvtrtDHQREITSLKEHF----GAREET--HQKEIKALYTATEKLS 564
Cdd:COG5022 937 LNnidleegPSIEYVKLPELNKLHEVESKLKETSE----EYEDLLKKSTILVregnKANSELknFKKELAELSKQYGALQ 1012
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 565 KENESLKSKlEHANKENSDVIALWKSklETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKmRLDYQHEIENLQN 644
Cdd:COG5022 1013 ESTKQLKEL-PVEVAELQSASKIISS--ESTELSILKPLQKLKGLLLLENNQLQARYKALKLRREN-SLLDDKQLYQLES 1088
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 645 QQDSERAAHAKEMEALRAKLMKVIKEKE-NSLEAIRSKLDKAED----QHLVEMEDTLNKLQEAEIKVKELEVLQAkcNE 719
Cdd:COG5022 1089 TENLLKTINVKDLEVTNRNLVKPANVLQfIVAQMIKLNLLQEISkflsQLVNTLEPVFQKLSVLQLELDGLFWEAN--LE 1166
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 720 QTKVIDNFTSQLkatEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKH---LEIEKNAESSKASSITRELQgrELK 796
Cdd:COG5022 1167 ALPSPPPFAALS---EKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSgwpRGDKLKKLISEGWVPTEYST--SLK 1241
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 797 lTNLQENLSEVSQVKETLEKELQILKEkfAEASEEAVSVQRSMQE-TVNKLHQ--KEEQFNMLSSDLEKLR--------E 865
Cdd:COG5022 1242 -GFNNLNKKFDTPASMSNEKLLSLLNS--IDNLLSSYKLEEEVLPaTINSLLQyiNVGLFNALRTKASSLRwksatevnY 1318
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 2217290422 866 NLADMEAKFREK-----DEREEQLI---KAKEKLENDIAEI 898
Cdd:COG5022 1319 NSEELDDWCREFeisdvDEELEELIqavKVLQLLKDDLNKL 1359
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
513-1051 |
4.27e-04 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 44.68 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 513 LLQEISSLQEKLEVTRTDHQREITSLKEHFGAR-EETHQKEIKALYTATEKLSKENESLKsKLEHANKENSDVIALWKSK 591
Cdd:COG5244 84 GLVCESKGMDKDGEIKQENHEDRIHFEESKIRRlEETIEALKSTEKEEIVELRRENEELD-KINLSLRERISSEEPELNK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 592 LETAIASHQ--QAMEELKVsfskgLGTETAEFAELKTQIEKMRLDYQheienLQNQQDSERAAHAKEMEALRAKLMKVIK 669
Cdd:COG5244 163 DGSKLSYDElkEFVEESRV-----QVYDMVELVSDISETLNRNGSIQ-----RSSVRECERSNIHDVLFLVNGILDGVID 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 670 EKENSLEAIRSKLDKAEDQHLVEMED------TLNKLQEAEIKVKEL--EVLQAKCNEQTKVIDNFTSQlKATEEKLLDL 741
Cdd:COG5244 233 ELNGELERLRRQLVSLMSSHGIEVEEnsrlkaTLEKFQSLELKVNTLqeELYQNKLLKKFYQIYEPFAQ-AALSSQLQYL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 742 DALRKASSEGKSEMKKLRQ--QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLtNLQENLS-EVSQVKETLEKEL 818
Cdd:COG5244 312 AEVIESENFGKLENIEIHIilKVLSSISYALHIYTIKNTPDHLETTLQCFVNIAPISM-WLSEFLQrKFSSKQETAFSIC 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 819 QILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA----KFREKDEREEQLIKAKEKLEND 894
Cdd:COG5244 391 QFLEDN--KDVTLILKILHPILETTVPKLLAFLRTNSNFNDNDTLCLIGSLYEIaridKLIGKEEISKQDNRLFLYPSCD 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 895 IAEIMKMS---GDNSSQLTKMNDELRLKERDVEEL---QLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKE 968
Cdd:COG5244 469 ITLSSILTilfSDKLEVFFQGIESLLENITIFPEQpsqQTSDSENIKENSLLSDRLNEENIRLKEVLVQKENMLTEETKI 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 969 LERKLSDLEKKmeTSHNQCQELKARYERATSETKTKHEeilqNLQKTLLDTEDKLKGAREEN------SGLLQELEELRK 1042
Cdd:COG5244 549 KIIIGRDLERK--TLEENIKTLKVELNNKNNKLKEENF----NLVNRLKNMELKLYQIKDNNtlnkiyLDLVSEIMELRE 622
|
....*....
gi 2217290422 1043 QADKAKAAQ 1051
Cdd:COG5244 623 TIRRQIKEQ 631
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
689-890 |
4.37e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 44.30 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 689 HLVEMEDTLNKLQeAEIKVKELEV---------LQAKCNEQTKVIDNFTSQLKATEEKLLDLD--------ALRKASSEG 751
Cdd:PRK11637 41 HASDNRDQLKSIQ-QDIAAKEKSVrqqqqqrasLLAQLKKQEEAISQASRKLRETQNTLNQLNkqidelnaSIAKLEQQQ 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 752 KSEMKKLRQQLEAAEKQIKH--LEIEKNAESSKASSitREL-------QGRELKLTNLQENLSEVSQVKETLE----KEL 818
Cdd:PRK11637 120 AAQERLLAAQLDAAFRQGEHtgLQLILSGEESQRGE--RILayfgylnQARQETIAELKQTREELAAQKAELEekqsQQK 197
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2217290422 819 QILKEKFAEAS--EEAVSV-QRSMQETVNKLHQKEEQFNMLSSDLEKLRENL--ADMEAKFR-EKDEREEQLIKAKEK 890
Cdd:PRK11637 198 TLLYEQQAQQQklEQARNErKKTLTGLESSLQKDQQQLSELRANESRLRDSIarAEREAKARaEREAREAARVRDKQK 275
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
741-897 |
5.10e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 5.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 741 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKE-------- 812
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyealqkei 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 813 -TLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQfnmlssdlekLRENLADMEAKFREKDEREEQLIKAKEKL 891
Cdd:COG1579 99 eSLKRRISDLEDEILELMERIEELEEELAELEAELAELEAE----------LEEKKAELDEELAELEAELEELEAEREEL 168
|
....*.
gi 2217290422 892 ENDIAE 897
Cdd:COG1579 169 AAKIPP 174
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
354-917 |
5.50e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.57 E-value: 5.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 354 QEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGH--DQHVLELEAKMDQLRTMVEAADREKVELLNQL 431
Cdd:TIGR00618 337 QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHtlQQQKTTLTQKLQSLCKELDILQREQATIDTRT 416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 432 EEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATVsEKSRIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSL 511
Cdd:TIGR00618 417 SAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKL-EKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLAR 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 512 SLLQ-------EISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKLEHANKENSDV 584
Cdd:TIGR00618 496 LLELqeepcplCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSIL 575
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 585 IALWKSkLETAIASHQQAMEELKVSFSKGLGTETAEFAELKTQIEKMrldyQHEIENLQNQQDSERAAH--AKEMEALRA 662
Cdd:TIGR00618 576 TQCDNR-SKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKL----QPEQDLQDVRLHLQQCSQelALKLTALHA 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 663 KLMKVIKEKEnSLEAIRSKLDKAEdqhlvemedtlnKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLD 742
Cdd:TIGR00618 651 LQLTLTQERV-REHALSIRVLPKE------------LLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYD 717
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 743 ALRKASSEGKSEMK-KLRQQLEAAEKQIKHLEiEKNAESSKASSITRELQGREL-----KLTNLQENLSEVSQVKETLEK 816
Cdd:TIGR00618 718 REFNEIENASSSLGsDLAAREDALNQSLKELM-HQARTVLKARTEAHFNNNEEVtaalqTGAELSHLAAEIQFFNRLREE 796
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 817 ELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNmlsSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIA 896
Cdd:TIGR00618 797 DTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFL---SRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQ 873
|
570 580
....*....|....*....|.
gi 2217290422 897 EIMKMSGDNSSQLTKMNDELR 917
Cdd:TIGR00618 874 LSDKLNGINQIKIQFDGDALI 894
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
422-866 |
5.78e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 44.66 E-value: 5.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 422 REKVELLNQLEEEKRKVEDLQfrveeESITKGDLEQKSQISEDPENVATVSEKSRIMELEKdLALRVQEVAELRRRLESN 501
Cdd:TIGR01612 1304 REKSLKIIEDFSEESDINDIK-----KELQKNLLDAQKHNSDINLYLNEIANIYNILKLNK-IKKIIDEVKEYTKEIEEN 1377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 502 KP--AGDVDMSLSLLQEI---SSLQE---KLEVTRTDHQ-----REITSLKEHFGAREETHQKeikalYTATEKLSKENE 568
Cdd:TIGR01612 1378 NKniKDELDKSEKLIKKIkddINLEEcksKIESTLDDKDideciKKIKELKNHILSEESNIDT-----YFKNADENNENV 1452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 569 SLKSK-LEHANKENSDVIalwKSKLETAIASHQQAMEELKVSFSKGLGTETaEFAELKTQIEKMRLDYQheienlQNQQD 647
Cdd:TIGR01612 1453 LLLFKnIEMADNKSQHIL---KIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKELFE------QYKKD 1522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 648 SERAAHAKEMEALRAKLMKVIKEKENSLEAIRskldKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNF 727
Cdd:TIGR01612 1523 VTELLNKYSALAIKNKFAKTKKDSEIIIKEIK----DAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDI 1598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 728 TSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKA-----SSITRELQGRELKLTNLQE 802
Cdd:TIGR01612 1599 QLSLENFENKFLKISDIKKKINDCLKETESIEKKISSFSIDSQDTELKENGDNLNSlqeflESLKDQKKNIEDKKKELDE 1678
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 803 NLSEVSQVKETLEKE--------LQILKEKFAEASEEAVSVQRSMQETVNKLhqkEEQFNmlSSDLEKLREN 866
Cdd:TIGR01612 1679 LDSEIEKIEIDVDQHkknyeigiIEKIKEIAIANKEEIESIKELIEPTIENL---ISSFN--TNDLEGIDPN 1745
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
812-930 |
6.01e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.46 E-value: 6.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 812 ETLEKELQILKEKfaEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDER----EEQLIKA 887
Cdd:COG2433 376 LSIEEALEELIEK--ELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERierlERELSEA 453
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2217290422 888 KEKLENDI---AEIMKMSGDNsSQLTKmndELRLKERDVEELQLKL 930
Cdd:COG2433 454 RSEERREIrkdREISRLDREI-ERLER---ELEEERERIEELKRKL 495
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
614-829 |
6.48e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 614 LGTETAEFAELKTQIEKMRLDYQHEIENLQ---NQQDSERAAHAKEMEALRAKLMKV---IKEKENSLEAIRSKLDKAED 687
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEkelAALKKEEKALLKQLAALERRIAALarrIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 688 QhLVEMEDTLNKLQEAeikVKELEVLQAKCNEQTKV------------------IDNFTSQLKATEEKL-LDLDALRKAS 748
Cdd:COG4942 91 E-IAELRAELEAQKEE---LAELLRALYRLGRQPPLalllspedfldavrrlqyLKYLAPARREQAEELrADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 749 SEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEA 828
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
.
gi 2217290422 829 S 829
Cdd:COG4942 247 G 247
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1026-1297 |
6.84e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.13 E-value: 6.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1026 AREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKS 1105
Cdd:PRK11281 27 ARAASNGDLPTEADVQAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEAL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1106 KElltvENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEelgrsrdevtshqkleeersvLNNQLlemkkreskf 1185
Cdd:PRK11281 107 KD----DNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDLAE---------------------YNSQL---------- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1186 ikdadeekASLQKSISITSALLTEKDAELEKLRNEvtvLRGENASAKSLHSvvqtleSDKVKLELKVKNLELQLKENKRQ 1265
Cdd:PRK11281 152 --------VSLQTQPERAQAALYANSQRLQQIRNL---LKGGKVGGKALRP------SQRVLLQAEQALLNAQNDLQRKS 214
|
250 260 270
....*....|....*....|....*....|....*.
gi 2217290422 1266 LSSSSGNTDT---QADE-DERAQESQQMIDFLNSVI 1297
Cdd:PRK11281 215 LEGNTQLQDLlqkQRDYlTARIQRLEHQLQLLQEAI 250
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
761-956 |
7.40e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 7.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 761 QLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQ 840
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 841 ET-------------------------VNKLHQKE-EQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 894
Cdd:COG3883 97 RSggsvsyldvllgsesfsdfldrlsaLSKIADADaDLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQ 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 895 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 956
Cdd:COG3883 177 QAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 238
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
974-1160 |
9.35e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.28 E-value: 9.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 974 SDLEKKMETSHNQCQELKARYERATSETKTKHEEIlQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADK------A 1047
Cdd:COG3883 33 EAAQAELDALQAELEELNEEYNELQAELEALQAEI-DKLQAEIAEAEAEIEERREELGERARALYRSGGSVSYldvllgS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1048 KAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLtveNQKMEEFRKEIETLK 1127
Cdd:COG3883 112 ESFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL---EAQQAEQEALLAQLS 188
|
170 180 190
....*....|....*....|....*....|...
gi 2217290422 1128 QAAAQKSQQLSALQEENVKLAEELGRSRDEVTS 1160
Cdd:COG3883 189 AEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
668-872 |
9.40e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 9.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 668 IKEKENSLEAIRSKLDKAEDQhlvemedtLNKLQEAEIKV-KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRK 746
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKE--------LAALKKEEKALlKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 747 ASSEGKSEMKK-LRQQLEAAEK--QIKHLEIEKNAESSKASSITREL-----QGRELKLTNLQENLSEVSQVKETLE--- 815
Cdd:COG4942 94 ELRAELEAQKEeLAELLRALYRlgRQPPLALLLSPEDFLDAVRRLQYlkylaPARREQAEELRADLAELAALRAELEaer 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2217290422 816 --------------KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA 872
Cdd:COG4942 174 aeleallaeleeerAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
629-835 |
1.08e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 629 EKMRLDYQHEIENlqnqqDSERAAHAKEMEALRAklmkvIKEKENSLEAirskldKAEDQHLVEM-----------EDTL 697
Cdd:COG2433 319 EKLHLAREYGYDN-----DHERDALAAALKAYDA-----YKNKFERVEK------KVPPDVDRDEvkarvirglsiEEAL 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 698 NKLQEAEIKVKELEVLQAKCNEQTkvidnftsQLKATEEKLLDLDALRKassEGKSEMKKLRQQLEAAEKQIKHLEIEKN 777
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEER--------ELTEEEEEIRRLEEQVE---RLEAEVEELEAELEEKDERIERLERELS 451
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 778 AESSKASS---ITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKE-KFAEASEEAVSV 835
Cdd:COG2433 452 EARSEERReirKDREISRLDREIERLERELEEERERIEELKRKLERLKElWKLEHSGELVPV 513
|
|
| COG4487 |
COG4487 |
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown]; |
975-1137 |
1.28e-03 |
|
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown];
Pssm-ID: 443580 [Multi-domain] Cd Length: 425 Bit Score: 43.01 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 975 DLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGllQELEELRKQAdKAKAAQTAE 1054
Cdd:COG4487 37 ERLADAAKREAALELAEAKAKAQLQEQVAEKDAEIAELRARLEAEERKKALAVAEEKE--KELAALQEAL-AEKDAKLAE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1055 DAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKEN-NLKNVEELNKSKELLTVENQK-MEEFRKEIETLKQAAAQ 1132
Cdd:COG4487 114 LQAKELELLKKERELEDAKREAELTVEKERDEELDELKEKlKKEEEEKQLAEKSLKVAEYEKqLKDMQEQIEELKRKKEQ 193
|
....*
gi 2217290422 1133 KSQQL 1137
Cdd:COG4487 194 GSTQL 198
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
695-867 |
1.39e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 695 DTLNKLQEAEIKVKELEV----LQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKassEGKSEMKKLRQQLEAAEKQIK 770
Cdd:COG1579 7 RALLDLQELDSELDRLEHrlkeLPAELAELEDELAALEARLEAAKTELEDLEKEIK---RLELEIEEVEARIKKYEEQLG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 771 hleiekNAESSK-ASSITRELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQK 849
Cdd:COG1579 84 ------NVRNNKeYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170
....*....|....*...
gi 2217290422 850 EEQfnmLSSDLEKLRENL 867
Cdd:COG1579 158 LEE---LEAEREELAAKI 172
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1082-1227 |
1.47e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1082 AKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRD--EVT 1159
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 1160 SHQK----LEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGE 1227
Cdd:COG1579 93 ALQKeiesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE 164
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
619-956 |
1.48e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.92 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 619 AEFAELKTQIEKMRLdyqhEIENLQNQQDSERaahaKEMEALRAKLMKVIKEKENSLEAIRSKLDKA----EDQHLVEME 694
Cdd:pfam06160 107 EELDELLESEEKNRE----EVEELKDKYRELR----KTLLANRFSYGPAIDELEKQLAEIEEEFSQFeeltESGDYLEAR 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 695 DTLNKLQEA----EIKVKELEVLQAKCneQTKVIDNFTsQLKATEEKLLDLD-ALRKASSEgkSEMKKLRQQLEAAEKQI 769
Cdd:pfam06160 179 EVLEKLEEEtdalEELMEDIPPLYEEL--KTELPDQLE-ELKEGYREMEEEGyALEHLNVD--KEIQQLEEQLEENLALL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 770 KHLEIEKNAESSKA---------SSITRELQGR---ELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ- 836
Cdd:pfam06160 254 ENLELDEAEEALEEieeridqlyDLLEKEVDAKkyvEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRg 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 837 ---------RSMQETVNKLHQKEEQFNMLSSDLEKLRENLADME---AKFRE------KDERE--EQLIKAKEKLENDI- 895
Cdd:pfam06160 334 lekqleeleKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEeeqEEFKEslqslrKDELEarEKLDEFKLELREIKr 413
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2217290422 896 -----------AEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQ 956
Cdd:pfam06160 414 lveksnlpglpESYLDYFFDVSDEIEDLADELNEVPLNMDEVNRLLDEAQDDVDTLYEKTEELIDNATLAEQ 485
|
|
| HOOK |
pfam05622 |
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from ... |
685-954 |
1.49e-03 |
|
HOOK protein coiled-coil region; This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organizms. The different members of the human gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three human HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas this central coiled-coil motif mediates homodimerization and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes, whereas both HOOK1 and HOOK2 are localized to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head. This entry includes the central coiled-coiled domain and the divergent C-terminal domain.
Pssm-ID: 461694 [Multi-domain] Cd Length: 528 Bit Score: 42.75 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 685 AEDQHLvemEDTLNKLQEAEIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLdALRKASSEgkSEMKK---LRQQ 761
Cdd:pfam05622 111 EEAQAL---KDEMDILRESSDKVKKLEATVETYKKKLEDLGDLRRQVKLLEERNAEY-MQRTLQLE--EELKKanaLRGQ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 762 LEAAEKQIKHLEIEKNAESSKASSITRELQgrelkltNLQENLSEVSQVKETLEKELQILKE-----KFAEASEEAVSVQ 836
Cdd:pfam05622 185 LETYKRQVQELHGKLSEESKKADKLEFEYK-------KLEEKLEALQKEKERLIIERDTLREtneelRCAQLQQAELSQA 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 837 RSMQ-----------------ETVNKLHQKEEQFNMLS-----SDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 894
Cdd:pfam05622 258 DALLspssdpgdnlaaeimpaEIREKLIRLQHENKMLRlgqegSYRERLTELQQLLEDANRRKNELETQNRLANQRILEL 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 895 IAEIMKMSGDNSSQLTKMNDELRLKeRDVEELQLKLTKANENASFLQKSIEDMTVKAEQS 954
Cdd:pfam05622 338 QQQVEELQKALQEQGSKAEDSSLLK-QKLEEHLEKLHEAQSELQKKKEQIEELEPKQDSN 396
|
|
| PRK05431 |
PRK05431 |
seryl-tRNA synthetase; Provisional |
675-772 |
2.37e-03 |
|
seryl-tRNA synthetase; Provisional
Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 41.98 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 675 LEAIRSKLDK-AEDQHLVEMEDTLNKLQEAEIKVKEL----EVLQAKCNEQTKVIdnftSQLKATEEkllDLDALRKASS 749
Cdd:PRK05431 4 IKLIRENPEAvKEALAKRGFPLDVDELLELDEERRELqtelEELQAERNALSKEI----GQAKRKGE---DAEALIAEVK 76
|
90 100
....*....|....*....|...
gi 2217290422 750 EGKSEMKKLRQQLEAAEKQIKHL 772
Cdd:PRK05431 77 ELKEEIKALEAELDELEAELEEL 99
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
692-932 |
2.65e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 692 EMEDTLNKLQEAEIkvkeLEVLQAKCNEQTKVIDNFTSQLKATEEKLldlDALRKASSEGKSEMK-KLRQQLEAAEKQIK 770
Cdd:PRK05771 17 YKDEVLEALHELGV----VHIEDLKEELSNERLRKLRSLLTKLSEAL---DKLRSYLPKLNPLREeKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 771 HLEIEknaesskASSITRELQGRELKLTNLQENLSEVSQVKETLEK------ELQILKEK------FAEASEEAVSVQRS 838
Cdd:PRK05771 90 DVEEE-------LEKIEKEIKELEEEISELENEIKELEQEIERLEPwgnfdlDLSLLLGFkyvsvfVGTVPEDKLEELKL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 839 MQETVNKLHQKEEQ------FNMLSSDLEKLRENLADMEAK-------------FREKDEREEQLIKAKEKLENDIAEIM 899
Cdd:PRK05771 163 ESDVENVEYISTDKgyvyvvVVVLKELSDEVEEELKKLGFErleleeegtpselIREIKEELEEIEKERESLLEELKELA 242
|
250 260 270
....*....|....*....|....*....|...
gi 2217290422 900 KMSGDNSSQLtkmnDELRLKERDVEELQLKLTK 932
Cdd:PRK05771 243 KKYLEELLAL----YEYLEIELERAEALSKFLK 271
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
674-956 |
2.83e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.21 E-value: 2.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 674 SLEAIRSKLDKAEDQhlvemedtlnKLQEAEIKVkelevlqakcneqtkvidnftsqLKATEEKLLDLDALRKASsegKS 753
Cdd:PRK11281 37 TEADVQAQLDALNKQ----------KLLEAEDKL-----------------------VQQDLEQTLALLDKIDRQ---KE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 754 EMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRElQGRELKLTNLQENLSEVSQvketlekELQILKEKFAEASEEAV 833
Cdd:PRK11281 81 ETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRE-TLSTLSLRQLESRLAQTLD-------QLQNAQNDLAEYNSQLV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 834 SVQ----RSMQETVNKLHQKEEQFNMLSSDleklRENLADMEAKFREKDEREEQLIKAKEKLEndiaeimKMSGDNSSQL 909
Cdd:PRK11281 153 SLQtqpeRAQAALYANSQRLQQIRNLLKGG----KVGGKALRPSQRVLLQAEQALLNAQNDLQ-------RKSLEGNTQL 221
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 910 TkmndELRLKERDveELQLKLTKANENASFLQKSIED-------MTVKAEQSQQ 956
Cdd:PRK11281 222 Q----DLLQKQRD--YLTARIQRLEHQLQLLQEAINSkrltlseKTVQEAQSQD 269
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
640-947 |
2.94e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 640 ENLQNQQDSERAAHAKEMEALRAKLMKVIKEKEN-SLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKELEVLQAKCN 718
Cdd:PLN02939 94 DDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKIN 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 719 eqtkvidnftsqlkATEEKLLDLDALRKASSEGKSEMKKLRQQLeaaEKQIKHLEIEKNAESSKASSITRELQgrELKLT 798
Cdd:PLN02939 174 --------------ILEMRLSETDARIKLAAQEKIHVEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD--VLKEE 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 799 N---------LQENLSEVSQVKE---TLEKELQILKEKFAEASEEAVSVQRSMQET----VNKLHQKEEQFNMLSSDLEK 862
Cdd:PLN02939 235 NmllkddiqfLKAELIEVAETEErvfKLEKERSLLDASLRELESKFIVAQEDVSKLsplqYDCWWEKVENLQDLLDRATN 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 863 LRENLA---DMEAKFREK-DEREEQLIKAK-EKLENDIAEIM--KMSG-----DNSSQltKMNDELRLKERDVEELQLKL 930
Cdd:PLN02939 315 QVEKAAlvlDQNQDLRDKvDKLEASLKEANvSKFSSYKVELLqqKLKLleerlQASDH--EIHSYIQLYQESIKEFQDTL 392
|
330
....*....|....*....
gi 2217290422 931 TKANENAS--FLQKSIEDM 947
Cdd:PLN02939 393 SKLKEESKkrSLEHPADDM 411
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
728-1127 |
2.94e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.13 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 728 TSQLKATEEKLLDL-DALRKAS-SEGKSEMKKLRQQLEAAEKQIKHLE------IEKNAESSKASSITRELQgRELKLTN 799
Cdd:PRK04778 78 TNSLPDIEEQLFEAeELNDKFRfRKAKHEINEIESLLDLIEEDIEQILeelqelLESEEKNREEVEQLKDLY-RELRKSL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 800 LQENLSeVSQVKETLEKELQILKEKFAEASE--------EAVSVQRSMQETVNKLHQKEEQFNMLSSDLEK-LRENLADM 870
Cdd:PRK04778 157 LANRFS-FGPALDELEKQLENLEEEFSQFVEltesgdyvEAREILDQLEEELAALEQIMEEIPELLKELQTeLPDQLQEL 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 871 EAKFREkdereeqLIKAKEKLENDIAEimkmsgdnsSQLTKMNDELRLKERDVEElqLKLTKANENASFLQKSIEDM--- 947
Cdd:PRK04778 236 KAGYRE-------LVEEGYHLDHLDIE---------KEIQDLKEQIDENLALLEE--LDLDEAEEKNEEIQERIDQLydi 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 948 ---TVKAEQsqqeaakkheeekkelerklsDLEKKMETshnqcqeLKARYERATSETKTKHEEILQnLQKTLLDTEDKLK 1024
Cdd:PRK04778 298 lerEVKARK---------------------YVEKNSDT-------LPDFLEHAKEQNKELKEEIDR-VKQSYTLNESELE 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1025 GAREensgLLQELEELRKQADKAKAAQTAEDAM--QIMEQMtkekTETLASLEDTKQTNAKLQNELDTLKEnnlknvEEL 1102
Cdd:PRK04778 349 SVRQ----LEKQLESLEKQYDEITERIAEQEIAysELQEEL----EEILKQLEEIEKEQEKLSEMLQGLRK------DEL 414
|
410 420
....*....|....*....|....*
gi 2217290422 1103 nkskelltVENQKMEEFRKEIETLK 1127
Cdd:PRK04778 415 --------EAREKLERYRNKLHEIK 431
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
840-1051 |
3.06e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 3.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 840 QETVNKL------HQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLikakeKLENDIAEIMKMSGDNSSQLTKMN 913
Cdd:COG3206 151 AAVANALaeayleQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEF-----RQKNGLVDLSEEAKLLLQQLSELE 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 914 DELRlkerdveELQLKLTKANENASFLQKSIE-DMTVKAEQSQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKA 992
Cdd:COG3206 226 SQLA-------EARAELAEAEARLAALRAQLGsGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRA 298
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 993 RYERATsetktkhEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQ 1051
Cdd:COG3206 299 QIAALR-------AQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELE 350
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
999-1307 |
3.18e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.93 E-value: 3.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 999 SETKTKhEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKaaqtaedamQIMEQMTKEKTETLASLEDTK 1078
Cdd:TIGR04523 47 NELKNK-EKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNK---------DKINKLNSDLSKINSEIKNDK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1079 QTNAKLQNELDTLK-------ENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEEL 1151
Cdd:TIGR04523 117 EQKNKLEVELNKLEkqkkenkKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1152 GRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQKSISITSA-------LLTEKDAELEKLRNEVTVL 1224
Cdd:TIGR04523 197 LKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNtqtqlnqLKDEQNKIKKQLSEKQKEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1225 RGENASAKSLHSVVQTLESD-----KVKLELKVKNLELQLKENKRQLSsssgNTDTQADederaqESQQMIDFLNSVIVD 1299
Cdd:TIGR04523 277 EQNNKKIKELEKQLNQLKSEisdlnNQKEQDWNKELKSELKNQEKKLE----EIQNQIS------QNNKIISQLNEQISQ 346
|
....*...
gi 2217290422 1300 LQRKNQDL 1307
Cdd:TIGR04523 347 LKKELTNS 354
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1034-1241 |
3.29e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1034 LQELEELRKQADKAKAAQTAedamqiMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK--ENNLKNVEELNKSKELLTV 1111
Cdd:COG4717 70 LKELKELEEELKEAEEKEEE------YAELQEELEELEEELEELEAELEELREELEKLEklLQLLPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1112 ENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELgrsrdEVTSHQKLEEersvlnnqllemkkreskfIKDADE 1191
Cdd:COG4717 144 LPERLEELEERLEELRELEEELEELEAELAELQEELEELL-----EQLSLATEEE-------------------LQDLAE 199
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1192 EKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTL 1241
Cdd:COG4717 200 ELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEAR 249
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
760-921 |
3.35e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.99 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 760 QQLEAAEKQIKHLEIEKNAesskassITREL-QGRELKLTNLQENLSEvsqvketLEKELQILKEKFAEASEEAVSVQRS 838
Cdd:COG0542 411 EELDELERRLEQLEIEKEA-------LKKEQdEASFERLAELRDELAE-------LEEELEALKARWEAEKELIEEIQEL 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 839 MQEtvnkLHQKEEQFNMLSSDLEKLRENLADMEAKFREK-DereeqlikakeklENDIAEIM---------KMSGDNSSQ 908
Cdd:COG0542 477 KEE----LEQRYGKIPELEKELAELEEELAELAPLLREEvT-------------EEDIAEVVsrwtgipvgKLLEGEREK 539
|
170
....*....|...
gi 2217290422 909 LTKMNDElrLKER 921
Cdd:COG0542 540 LLNLEEE--LHER 550
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
353-606 |
4.04e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.97 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 353 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALardgHDQHVLELEAKMDQLRTMVEAADREKVELLNQLE 432
Cdd:TIGR02168 773 AEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL----LNEEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 433 EEKRKVEDLQFRVEEESITKGDLEQKSQISE---DPENVATVSEKSRIMELEKDLALRVQEVAELRRRL-ESNKPAGDVD 508
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLnerASLEEALALLRSELEELSEELRELESKRSELRRELeELREKLAQLE 928
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 509 MSLS-LLQEISSLQEKLEVTRTDHQREITSLKEHFGAREETHQKEIKALYTATEKLSKEN-------ESLKSKLEHANKE 580
Cdd:TIGR02168 929 LRLEgLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNlaaieeyEELKERYDFLTAQ 1008
|
250 260
....*....|....*....|....*.
gi 2217290422 581 NSDvialwkskLETAIASHQQAMEEL 606
Cdd:TIGR02168 1009 KED--------LTEAKETLEEAIEEI 1026
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
462-705 |
4.15e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 462 SEDPENVATVSEKsrIME--LEKDLALRVQEVAELRRRLESNKPagdvdmslSLLQEISSLQEKLEVTRTDHQreITSLK 539
Cdd:COG3206 144 SPDPELAAAVANA--LAEayLEQNLELRREEARKALEFLEEQLP--------ELRKELEEAEAALEEFRQKNG--LVDLS 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 540 EHFGAREEThQKEIKALYTATEKLSKENESLKSKLEHANKENSDVI-ALWKSKLETAIASHQQAMEELKVSFSKGLGTET 618
Cdd:COG3206 212 EEAKLLLQQ-LSELESQLAEARAELAEAEARLAALRAQLGSGPDALpELLQSPVIQQLRAQLAELEAELAELSARYTPNH 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 619 AEFAELKTQIEKMRLDYQHEIENLQNQQDSERAAHAKEMEALRAKL------MKVIKEKENSLEAIRSKLDKAEDQHlve 692
Cdd:COG3206 291 PDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLaqlearLAELPELEAELRRLEREVEVARELY--- 367
|
250
....*....|...
gi 2217290422 693 mEDTLNKLQEAEI 705
Cdd:COG3206 368 -ESLLQRLEEARL 379
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
732-945 |
4.38e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 4.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 732 KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVK 811
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 812 ETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREeqLIKAKEKL 891
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE--AEQALDEL 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2217290422 892 ENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIE 945
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDAL 242
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
691-895 |
4.42e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.55 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 691 VEMEDTLNKLQEAEIKV--KELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQ 768
Cdd:pfam05667 323 VETEEELQQQREEELEElqEQLEDLESSIQELEKEIKKLESSIKQVEEELEELKEQNEELEKQYKVKKKTLDLLPDAEEN 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 769 IKHLEIEKNAESSKassitrelqgrelkltnLQENLSEVSQVKETLEKELQILKEKFAEASEEAvsvQRSMQEtvnklhq 848
Cdd:pfam05667 403 IAKLQALVDASAQR-----------------LVELAGQWEKHRVPLIEEYRALKEAKSNKEDES---QRKLEE------- 455
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2217290422 849 keeqfnmlssdLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDI 895
Cdd:pfam05667 456 -----------IKELREKIKEVAEEAKQKEELYKQLVAEYERLPKDV 491
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
563-817 |
4.74e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 4.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 563 LSKENESLKSKLEHANkENSDVIALWKSKLETAIASHQQAMEELKvsfsKGLGTETAEFAELKTQIEKMRLDYQHEIENL 642
Cdd:PHA02562 165 LSEMDKLNKDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQR----KKNGENIARKQNKYDELVEEAKTIKAEIEEL 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 643 QNQQdseraahakemealrAKLMKVIKEKENSLEAIRSKLDKAEDQHlvemeDTLNKL--------------QEAEIKVK 708
Cdd:PHA02562 240 TDEL---------------LNLVMDIEDPSAALNKLNTAAAKIKSKI-----EQFQKVikmyekggvcptctQQISEGPD 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 709 ELEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEieknAESSKASSitr 788
Cdd:PHA02562 300 RITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVK----AAIEELQA--- 372
|
250 260
....*....|....*....|....*....
gi 2217290422 789 ELQGRELKLTNLQENLSEVSQVKETLEKE 817
Cdd:PHA02562 373 EFVDNAEELAKLQDELDKIVKTKSELVKE 401
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
789-1253 |
5.15e-03 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 41.74 E-value: 5.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 789 ELQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFaeaseeavsvqrsmqetvNKLHQKEEQFNMLSSDLEKLRENLA 868
Cdd:PTZ00440 485 SKEKKESSDSNYQEKVDELLQIINSIKEKNNIVNNNF------------------KNIEDYYITIEGLKNEIEGLIELIK 546
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 869 DMEAKFREKDEREeqliKAKEKLENDIAEIMKMSGDNSSQLTKM---NDELRLKERDVEELqLKLTKANENASFLQKSIE 945
Cdd:PTZ00440 547 YYLQSIETLIKDE----KLKRSMKNDIKNKIKYIEENVDHIKDIislNDEIDNIIQQIEEL-INEALFNKEKFINEKNDL 621
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 946 DMTVKaeqsqqeaakkheeeKKELERKLSDLEKKMETSHNQCQELKARYERATSETKtkheeiLQNLQKTLLDTEDKLKG 1025
Cdd:PTZ00440 622 QEKVK---------------YILNKFYKGDLQELLDELSHFLDDHKYLYHEAKSKED------LQTLLNTSKNEYEKLEF 680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1026 AREEN--------SGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLK 1097
Cdd:PTZ00440 681 MKSDNidniiknlKKELQNLLSLKENIIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNE 760
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1098 NVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLE 1177
Cdd:PTZ00440 761 FILHLYENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQ 840
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217290422 1178 MKKRESKFIKDADEEKaSLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESdkvKLELKVK 1253
Cdd:PTZ00440 841 KFPTEDENLNLKELEK-EFNENNQIVDNIIKDIENMNKNINIIKTLNIAINRSNSNKQLVEHLLNN---KIDLKNK 912
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
857-1131 |
5.31e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 857 SSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANEN 936
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 937 ASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDLEkkmetshnqcqelkaryeratsetktkheeILQNLQKTL 1016
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQ------------------------------YLKYLAPAR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1017 LDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEdamqimeqmtkektetLASLEDTKQTNAKLQNELDTLKENNL 1096
Cdd:COG4942 149 REQAEELRADLAELAALRAELEAERAELEALLAELEEE----------------RAALEALKAERQKLLARLEKELAELA 212
|
250 260 270
....*....|....*....|....*....|....*
gi 2217290422 1097 KNVEELNKSKELLTVENQKMEEFRKEIETLKQAAA 1131
Cdd:COG4942 213 AELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
501-921 |
5.34e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 501 NKPAGDVDMSLSLLQEISSLQEKLEVTRTDH---QREITSLKEHFGAREETHQ---------KEIKALYTATEKLSKENE 568
Cdd:PRK04863 279 NERRVHLEEALELRRELYTSRRQLAAEQYRLvemARELAELNEAESDLEQDYQaasdhlnlvQTALRQQEKIERYQADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 569 SLKSKLEhankENSDVIALWKSKLETAIASHQQAMEELKvsfskglgtetaefaELKTQI----------EKMRLDYQHE 638
Cdd:PRK04863 359 ELEERLE----EQNEVVEEADEQQEENEARAEAAEEEVD---------------ELKSQLadyqqaldvqQTRAIQYQQA 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 639 IENLQ-----NQQDSERAAHAKEM-EALRAKLmKVIKEKENSLEAIRSKLDKAEDQHLVEMEdTLNKLqeaeikVKELEV 712
Cdd:PRK04863 420 VQALErakqlCGLPDLTADNAEDWlEEFQAKE-QEATEELLSLEQKLSVAQAAHSQFEQAYQ-LVRKI------AGEVSR 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 713 LQAKcneqtkviDNFTSQLK-ATEEKLLD--LDALRKasseGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRE 789
Cdd:PRK04863 492 SEAW--------DVARELLRrLREQRHLAeqLQQLRM----RLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQL 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 790 LQGRELKLTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAvSVQRSMQETVNKL--HQKEEQFNmlSSDLEKLRENL 867
Cdd:PRK04863 560 QEELEARLESLSESVSEARERRMALRQQLEQLQARIQRLAARA-PAWLAAQDALARLreQSGEEFED--SQDVTEYMQQL 636
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2217290422 868 ADMEAKFR-EKDEREEQlikaKEKLEndiAEIMKMSGDNSSQLTKMNdelRLKER 921
Cdd:PRK04863 637 LERERELTvERDELAAR----KQALD---EEIERLSQPGGSEDPRLN---ALAER 681
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
732-1289 |
5.67e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.11 E-value: 5.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 732 KATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSIT-RELQGRELKLTNLQENLSEVSQV 810
Cdd:pfam02463 173 EALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYlDYLKLNEERIDLLQELLRDEQEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 811 KETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEK 890
Cdd:pfam02463 253 IESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKK 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 891 LENDIAEIMKmsgdnssQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTvkAEQSQQEAAKKHEEEKKELE 970
Cdd:pfam02463 333 EKEEIEELEK-------ELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLES--ERLSSAAKLKEEELELKSEE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 971 RKLSDLEKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENsgllqeLEELRKQADKAKAA 1050
Cdd:pfam02463 404 EKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKD------ELELKKSEDLLKET 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1051 QTAEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAA 1130
Cdd:pfam02463 478 QLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATA 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1131 AQKSQQLSALQEENvKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKAsLQKSISITSALLTEK 1210
Cdd:pfam02463 558 DEVEERQKLVRALT-ELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDK-RAKVVEGILKDTELT 635
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2217290422 1211 DAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQQM 1289
Cdd:pfam02463 636 KLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKK 714
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1006-1177 |
6.68e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 6.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1006 EEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAkaaqtaEDAMQIMEQMTKEKTETLASLEDTKQTNAkLQ 1085
Cdd:COG1579 23 EHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL------ELEIEEVEARIKKYEEQLGNVRNNKEYEA-LQ 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 1086 NELDTLKennlKNVEELNksKELLTVENQKmEEFRKEIETLKQAAAQKSQQLSALQEENVKLAEELGRSRDEVTshQKLE 1165
Cdd:COG1579 96 KEIESLK----RRISDLE--DEILELMERI-EELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE--AERE 166
|
170
....*....|..
gi 2217290422 1166 EERSVLNNQLLE 1177
Cdd:COG1579 167 ELAAKIPPELLA 178
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
723-893 |
7.09e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.97 E-value: 7.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 723 VIDNFTSQLKATEEKLLDLDALRKASSEGKSEMKKLRQQLEAAEKQIKH-LEIE-----KNAESSkASSITRELQGRElK 796
Cdd:PRK00409 521 LIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEeAEKEaqqaiKEAKKE-ADEIIKELRQLQ-K 598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 797 LTNLQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQ-------RSMQETVNKLHQKEEQFNMLSSDLEKLRENLAD 869
Cdd:PRK00409 599 GGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKvgdevkyLSLGQKGEVLSIPDDKEAIVQAGIMKMKVPLSD 678
|
170 180
....*....|....*....|....
gi 2217290422 870 MEAKFREKDEREEQLIKAKEKLEN 893
Cdd:PRK00409 679 LEKIQKPKKKKKKKPKTVKPKPRT 702
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
335-492 |
7.49e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 40.84 E-value: 7.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 335 LLTETSSRYARKISgttALQEALKEKQQHIEQLLAERD-LERAEVAKATSHVGEIEQELAlardghdqhvlELEAKMDQL 413
Cdd:COG0542 394 LIDEAAARVRMEID---SKPEELDELERRLEQLEIEKEaLKKEQDEASFERLAELRDELA-----------ELEEELEAL 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 414 RTMVEA---ADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENVATV--------------SEKSR 476
Cdd:COG0542 460 KARWEAekeLIEEIQELKEELEQRYGKIPELEKELAELEEELAELAPLLREEVTEEDIAEVvsrwtgipvgklleGEREK 539
|
170
....*....|....*...
gi 2217290422 477 IMELEKDLALRV--QEVA 492
Cdd:COG0542 540 LLNLEEELHERVigQDEA 557
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
332-678 |
8.28e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 8.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 332 RTGLLTETSSRYARKISGTTALQEA---LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlardghdqhvlELEA 408
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDAsrkIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE-----------NVKS 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 409 KMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQisedpenvatvseKSRIMELEKDLALRV 488
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRI-------------EARLREIEQKLNRLT 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 489 QEVAELRrrlesnkpagdvdmslSLLQEISSLQEKLEVTRTDHQREITSL---KEHFGAREETHQKEIKALYTATEKLSK 565
Cdd:TIGR02169 826 LEKEYLE----------------KEIQELQEQRIDLKEQIKSIEKEIENLngkKEELEEELEELEAALRDLESRLGDLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 566 ENESLKSKLEHANKENSDV---IALWKSKLETAIASHQQAMEELK-VSFSKGLGTETAEFAELKTQIEKMRLDYQHEIE- 640
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELeaqIEKKRKRLSELKAKLEALEEELSeIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRa 969
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2217290422 641 ----NLQNQQDSERAahAKEMEALRAKLMKVIKEKENSLEAI 678
Cdd:TIGR02169 970 lepvNMLAIQEYEEV--LKRLDELKEKRAKLEEERKAILERI 1009
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
800-955 |
9.05e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.27 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2217290422 800 LQENLSEVSQVKETLEKELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKDE 879
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2217290422 880 REEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQ 955
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQA 184
|
|
| |
