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Conserved domains on  [gi|506429449|ref|WP_015949168|]
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FAD-binding protein [Desulfatibacillum aliphaticivorans]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FAD_binding_2 super family cl46878
FAD binding domain; This family includes members that bind FAD. This family includes the ...
1-554 6.57e-65

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


The actual alignment was detected with superfamily member PRK06263:

Pssm-ID: 481218 [Multi-domain]  Cd Length: 543  Bit Score: 221.78  E-value: 6.57e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   1 MTQNYLETDVLVIGGGGAGFRAAIGAAEKGaKVTLLSKGPLARCGASPMAGADFTldgASMskidglqgDPSDSMEKVFN 80
Cdd:PRK06263   1 MEDEIMITDVLIIGSGGAGARAAIEAERGK-NVVIVSKGLFGKSGCTVMAEGGYN---AVL--------NPEDSFEKHFE 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  81 DIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMI----F-------------TSGLDILDALLRKARSLG 143
Cdd:PRK06263  69 DTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIaqrpFggqsfnrtcyagdRTGHEMMMGLMEYLIKER 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 144 VTFWEDIAMLDLVLEDG-AVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNME 222
Cdd:PRK06263 149 IKILEEVMAIKLIVDENrEVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDME 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 223 FITFccnvfyDPPiwrGSLAPYVMSLIV--------GGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHASMQEIRA 294
Cdd:PRK06263 229 MVQF------HPT---GMVYPYSGRGILvteavrgeGGILYNKNGERFMKRYDPERMELST-----RDVVARAIYTEIQE 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 295 GKAGPHGGIFYSRGDVPWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFA 374
Cdd:PRK06263 295 GRGTNHGGVYLDVTHLPDEVIEEKLETMLEQFLDVGVDIRK--------EPMEVAPTAHHFMGGIRINEDCETNIPGLFA 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 375 AGECTLGAFGSNRI-FSAITEMLVHGVDAGENAAEFAKSSAAAAASDAAYATLEEAASVPLTKSQGANPAKVRRRLQEAA 453
Cdd:PRK06263 367 CGEVAGGVHGANRLgGNALADTQVFGAIAGKSAAKNAENNEFKKVNRSVEEDIARIKSEIKFLNGSINPYDLIDELKKTM 446
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 454 HAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNAraynkEWVDALELPNLVLLLETSVRSALARTESRGVHFREDHP 533
Cdd:PRK06263 447 WDYVSIVRNEKGLKKALEEINELKEK-LKDLKVNGIV-----DFNKALELENMILVAELVIKSALLRKESRGAHYREDYP 520
                        570       580
                 ....*....|....*....|.
gi 506429449 534 ETdNDNWLQESVAALNGEAIE 554
Cdd:PRK06263 521 ET-NDEWFGNIILNKNKIKFE 540
 
Name Accession Description Interval E-value
sdhA PRK06263
succinate dehydrogenase flavoprotein subunit; Reviewed
1-554 6.57e-65

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 235758 [Multi-domain]  Cd Length: 543  Bit Score: 221.78  E-value: 6.57e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   1 MTQNYLETDVLVIGGGGAGFRAAIGAAEKGaKVTLLSKGPLARCGASPMAGADFTldgASMskidglqgDPSDSMEKVFN 80
Cdd:PRK06263   1 MEDEIMITDVLIIGSGGAGARAAIEAERGK-NVVIVSKGLFGKSGCTVMAEGGYN---AVL--------NPEDSFEKHFE 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  81 DIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMI----F-------------TSGLDILDALLRKARSLG 143
Cdd:PRK06263  69 DTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIaqrpFggqsfnrtcyagdRTGHEMMMGLMEYLIKER 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 144 VTFWEDIAMLDLVLEDG-AVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNME 222
Cdd:PRK06263 149 IKILEEVMAIKLIVDENrEVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDME 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 223 FITFccnvfyDPPiwrGSLAPYVMSLIV--------GGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHASMQEIRA 294
Cdd:PRK06263 229 MVQF------HPT---GMVYPYSGRGILvteavrgeGGILYNKNGERFMKRYDPERMELST-----RDVVARAIYTEIQE 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 295 GKAGPHGGIFYSRGDVPWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFA 374
Cdd:PRK06263 295 GRGTNHGGVYLDVTHLPDEVIEEKLETMLEQFLDVGVDIRK--------EPMEVAPTAHHFMGGIRINEDCETNIPGLFA 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 375 AGECTLGAFGSNRI-FSAITEMLVHGVDAGENAAEFAKSSAAAAASDAAYATLEEAASVPLTKSQGANPAKVRRRLQEAA 453
Cdd:PRK06263 367 CGEVAGGVHGANRLgGNALADTQVFGAIAGKSAAKNAENNEFKKVNRSVEEDIARIKSEIKFLNGSINPYDLIDELKKTM 446
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 454 HAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNAraynkEWVDALELPNLVLLLETSVRSALARTESRGVHFREDHP 533
Cdd:PRK06263 447 WDYVSIVRNEKGLKKALEEINELKEK-LKDLKVNGIV-----DFNKALELENMILVAELVIKSALLRKESRGAHYREDYP 520
                        570       580
                 ....*....|....*....|.
gi 506429449 534 ETdNDNWLQESVAALNGEAIE 554
Cdd:PRK06263 521 ET-NDEWFGNIILNKNKIKFE 540
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
32-551 9.98e-61

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 209.96  E-value: 9.98e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  32 KVTLLSKGPLARCgASPMAgadftldgasmskidglQG------DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQC 105
Cdd:COG0029   28 RVTLLTKGELGES-NTRWA-----------------QGgiaavlDPGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPER 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 106 LRELLDWGV--------KVKLSDE------RMIF---TSGLDILDALLRKARSL-GVTFWEDIAMLDLVLE-DGAVAGGL 166
Cdd:COG0029   90 IRELIELGVpfdrdedgELALTREgghsrrRILHagdATGREIERALLEAVRAHpNITVLENHFAVDLITDaDGRCVGAY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 167 ALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDPPIWRGslapyvm 246
Cdd:COG0029  170 VLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGAPSF------- 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 247 sLI---V---GGKLTNSEDEEFLNKYDPfviqtgtftewNKS-----VLSHASMQEIragKAGPHGGIFYsrgDV---PW 312
Cdd:COG0029  243 -LIseaVrgeGAVLRNADGERFMPDYHP-----------RAElaprdVVARAIDAEM---KKTGGDCVYL---DIshlDA 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 313 ENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS 390
Cdd:COG0029  305 EFIRERFPTIYARCLELGIDITK--------EPIPVAPAAHYTMGGVATDLDGRTSIPGLYAVGEvaCT-GVHGANRLAS 375
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 391 -AITEMLVHGVDAGENaaefaksSAAAAASDAAYATLEEAASVPLTKSQGANPAKVRRRLQEAAHAWLGPIRSGEEM--- 466
Cdd:COG0029  376 nSLLEGLVFGRRAAED-------IAARLAESPLPPEIPEWDESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLera 448
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 467 -DKLLGLTQEIKEN----------DLPNLALTSnaraynkewvdalelpnlvlllETSVRSALARTESRGVHFREDHPET 535
Cdd:COG0029  449 lRRLELLREEIEEYanfrvsrdllELRNLLLVA----------------------ELIVRAALARKESRGAHYRSDYPET 506
                        570
                 ....*....|....*.
gi 506429449 536 DnDNWLQESVAALNGE 551
Cdd:COG0029  507 D-PAWRRHTVLRLDDD 521
nadB TIGR00551
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ...
7-533 2.05e-39

L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273131 [Multi-domain]  Cd Length: 489  Bit Score: 150.72  E-value: 2.05e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449    7 ETDVLVIGGGGAGFRAAIGAAEKGaKVTLLSKGPLArcgaspmagadftlDGASMSKIDGLQG--DPSDSMEKVFNDIVT 84
Cdd:TIGR00551   2 EMDVVVIGSGAAGLSAALALAEKG-RVSVITKASVT--------------DSNSYYAQGGIAAalAETDSIDAHVEDTLA 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   85 QGSYLNNQKIVQQYVERAPQCLRELLDWGV--------KVKLSDE-----RMIF----TSGLDILDALLRKARS-LGVTF 146
Cdd:TIGR00551  67 AGAGICDEEAVWFVVSDGSEAVQFLVSHGVtfdrneqgGVALTREgghsyPRIFhagdATGREIIPTLEKHARSePNVNI 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  147 WEDIAMLDLVLEDGAVAGglALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITF 226
Cdd:TIGR00551 147 IEGEFALDLLIETGRCAG--VFVQGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQF 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  227 CCNVFYDPPIWRGSLAPYVMSliVGGKLTNSEDEEFLNKYDPfviqTGTFTEwnKSVLSHASMQEIRAGKAGPhggIFYs 306
Cdd:TIGR00551 225 HPTALIKPRVRYFLITEAVRG--EGAKLVDRDGERFMADRHP----RGELAP--RDIVARAIDMEMAEGGGDC---VFL- 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  307 rgDV-PWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAF 383
Cdd:TIGR00551 293 --DAsGIENFKDRFPTIYAVCRGAGIDPER--------EPIPVAPGAHYTMGGISVDAFGRTTIPGLYAIGEtaCT-GLH 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  384 GSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASDAayatleEAASVPLTKSQGANPAKVRRRLQEAAHAWLGPIRS 462
Cdd:TIGR00551 362 GANRLASnSLLECLVFGLRAARTISREPPYASREYQSGV------WDEPRSENPLDRHELQHKMSSLRSVLWNHAGIVRL 435
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 506429449  463 GEEMDKLLGLTQEIKEndlpnlaltsnaraynkEWVDALELPNLVLLLETSVRSALARTESRGVHFREDHP 533
Cdd:TIGR00551 436 EWSLREALRKLVEIQD-----------------EVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
9-387 1.00e-32

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 129.72  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449    9 DVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARcGASPMAGAdfTLDGASmskiDGLQGDPsDSMEKVFNDIVTQGSY 88
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFG-GATAWSSG--GIDALG----NPPQGGI-DSPELHPTDTLKGLDE 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   89 LNNQKIVQQYVERAPQCLRELLDWGVKVK------------------------LSDERMIFTSGLDILDALLRKARSLGV 144
Cdd:pfam00890  73 LADHPYVEAFVEAAPEAVDWLEALGVPFSrtedghldlrplgglsatwrtphdAADRRRGLGTGHALLARLLEGLRKAGV 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  145 TFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAK-AVVMASGGW---------HKAFWPNTGMRDLSGDGMAMAMRA 214
Cdd:pfam00890 153 DFQPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIaAVLLATGGFgrlaelllpAAGYADTTNPPANTGDGLALALRA 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  215 GAKMGN--MEFITFCcnvfydPPIWRGSLAPYVMsLIV-----GGKLTNSEDEEFLNKYDPfviqtgtfteWNksVLSHA 287
Cdd:pfam00890 233 GAALTDdlMEFVQFH------PTSLVGIRLGSGL-LIEalrgeGGILVNKDGRRFMNELAS----------RD--VVSRA 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  288 SMQEIRAGKAGPHGGIFYSrGDVPWENIEmvASiiFPKWKYKAIDLSawaqklqDG----EPVEVGPAVEYFEGGICVNE 363
Cdd:pfam00890 294 ITRNEIDEGRGANVYLDAS-GSLDAEGLE--AT--LPAINEEAIFGL-------DVdpydRPIPVFPAQHYTMGGVRTDE 361
                         410       420       430
                  ....*....|....*....|....*....|.
gi 506429449  364 KLET------TIPGLFAAGECTLGAF-GSNR 387
Cdd:pfam00890 362 NGRVldadgqPIPGLYAAGEVACGGVhGANR 392
 
Name Accession Description Interval E-value
sdhA PRK06263
succinate dehydrogenase flavoprotein subunit; Reviewed
1-554 6.57e-65

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 235758 [Multi-domain]  Cd Length: 543  Bit Score: 221.78  E-value: 6.57e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   1 MTQNYLETDVLVIGGGGAGFRAAIGAAEKGaKVTLLSKGPLARCGASPMAGADFTldgASMskidglqgDPSDSMEKVFN 80
Cdd:PRK06263   1 MEDEIMITDVLIIGSGGAGARAAIEAERGK-NVVIVSKGLFGKSGCTVMAEGGYN---AVL--------NPEDSFEKHFE 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  81 DIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMI----F-------------TSGLDILDALLRKARSLG 143
Cdd:PRK06263  69 DTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIaqrpFggqsfnrtcyagdRTGHEMMMGLMEYLIKER 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 144 VTFWEDIAMLDLVLEDG-AVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNME 222
Cdd:PRK06263 149 IKILEEVMAIKLIVDENrEVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDME 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 223 FITFccnvfyDPPiwrGSLAPYVMSLIV--------GGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHASMQEIRA 294
Cdd:PRK06263 229 MVQF------HPT---GMVYPYSGRGILvteavrgeGGILYNKNGERFMKRYDPERMELST-----RDVVARAIYTEIQE 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 295 GKAGPHGGIFYSRGDVPWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFA 374
Cdd:PRK06263 295 GRGTNHGGVYLDVTHLPDEVIEEKLETMLEQFLDVGVDIRK--------EPMEVAPTAHHFMGGIRINEDCETNIPGLFA 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 375 AGECTLGAFGSNRI-FSAITEMLVHGVDAGENAAEFAKSSAAAAASDAAYATLEEAASVPLTKSQGANPAKVRRRLQEAA 453
Cdd:PRK06263 367 CGEVAGGVHGANRLgGNALADTQVFGAIAGKSAAKNAENNEFKKVNRSVEEDIARIKSEIKFLNGSINPYDLIDELKKTM 446
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 454 HAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNAraynkEWVDALELPNLVLLLETSVRSALARTESRGVHFREDHP 533
Cdd:PRK06263 447 WDYVSIVRNEKGLKKALEEINELKEK-LKDLKVNGIV-----DFNKALELENMILVAELVIKSALLRKESRGAHYREDYP 520
                        570       580
                 ....*....|....*....|.
gi 506429449 534 ETdNDNWLQESVAALNGEAIE 554
Cdd:PRK06263 521 ET-NDEWFGNIILNKNKIKFE 540
sdhA PRK07803
succinate dehydrogenase flavoprotein subunit; Reviewed
7-567 2.31e-61

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236101 [Multi-domain]  Cd Length: 626  Bit Score: 214.13  E-value: 2.31e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   7 ETDVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARcGASPMA--GAdftldGASMSKIDglqgdPSDSMEKVFNDIVT 84
Cdd:PRK07803   8 SYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGK-AHTVMAegGC-----AAAMGNVN-----PKDNWQVHFRDTMR 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  85 QGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMI----F-------------TSGLDILDALLRKARSL----- 142
Cdd:PRK07803  77 GGKFLNNWRMAELHAKEAPDRVWELETYGALFDRTKDGRIsqrnFgghtyprlahvgdRTGLELIRTLQQKIVSLqqedh 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 143 --------GVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRA 214
Cdd:PRK07803 157 aelgdyeaRIKVFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRA 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 215 GAKMGNMEFITFccnvfyDPP--IWrgslAPYVMSLIV-------GGKLTNSEDEEFLNKYDP--FVIQTGTFTE----W 279
Cdd:PRK07803 237 GATLINMEFVQF------HPTgmVW----PPSVKGILVtegvrgdGGVLKNSEGKRFMFDYIPdvFKGQYAETEEeadrW 306
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 280 NKS--------------VLSHASMQEIRAGKAGPHGGIFY---SRgdVPWENIEMVASIIFPKWKYKA-IDLSAwaqklq 341
Cdd:PRK07803 307 YKDndnnrrppellprdEVARAINSEVKAGRGSPHGGVYLdiaSR--LPAEEIKRRLPSMYHQFKELAdVDITK------ 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 342 dgEPVEVGPAVEYFEGGICVN-EKLETTIPGLFAAGECTLGAFGSNRIF-SAITEMLVHGVDAGENAAE-FAKSSAAAAA 418
Cdd:PRK07803 379 --EPMEVGPTCHYVMGGVEVDpDTGAATVPGLFAAGECAGGMHGSNRLGgNSLSDLLVFGRRAGLGAADyVRGLGSRPAV 456
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 419 SDAAYATLEEAASVPLTKSQGA-NPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNaRAYNKEW 497
Cdd:PRK07803 457 SEEAVDAAAREALAPFERPAGAeNPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKER-AANVSVEGH-RQYNPGW 534
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 506429449 498 VDALELPNLVLLLETSVRSALARTESRGVHFREDHPETDnDNWLQES-VAALNGEAIEVGHRPITQTAMAP 567
Cdd:PRK07803 535 HLALDLRNMLLVSECVARAALERTESRGGHTRDDHPGMD-PEWRRINlVCRADPVGGHVTVTRQPQPPMRP 604
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
32-551 9.98e-61

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 209.96  E-value: 9.98e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  32 KVTLLSKGPLARCgASPMAgadftldgasmskidglQG------DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQC 105
Cdd:COG0029   28 RVTLLTKGELGES-NTRWA-----------------QGgiaavlDPGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPER 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 106 LRELLDWGV--------KVKLSDE------RMIF---TSGLDILDALLRKARSL-GVTFWEDIAMLDLVLE-DGAVAGGL 166
Cdd:COG0029   90 IRELIELGVpfdrdedgELALTREgghsrrRILHagdATGREIERALLEAVRAHpNITVLENHFAVDLITDaDGRCVGAY 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 167 ALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDPPIWRGslapyvm 246
Cdd:COG0029  170 VLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGAPSF------- 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 247 sLI---V---GGKLTNSEDEEFLNKYDPfviqtgtftewNKS-----VLSHASMQEIragKAGPHGGIFYsrgDV---PW 312
Cdd:COG0029  243 -LIseaVrgeGAVLRNADGERFMPDYHP-----------RAElaprdVVARAIDAEM---KKTGGDCVYL---DIshlDA 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 313 ENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS 390
Cdd:COG0029  305 EFIRERFPTIYARCLELGIDITK--------EPIPVAPAAHYTMGGVATDLDGRTSIPGLYAVGEvaCT-GVHGANRLAS 375
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 391 -AITEMLVHGVDAGENaaefaksSAAAAASDAAYATLEEAASVPLTKSQGANPAKVRRRLQEAAHAWLGPIRSGEEM--- 466
Cdd:COG0029  376 nSLLEGLVFGRRAAED-------IAARLAESPLPPEIPEWDESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLera 448
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 467 -DKLLGLTQEIKEN----------DLPNLALTSnaraynkewvdalelpnlvlllETSVRSALARTESRGVHFREDHPET 535
Cdd:COG0029  449 lRRLELLREEIEEYanfrvsrdllELRNLLLVA----------------------ELIVRAALARKESRGAHYRSDYPET 506
                        570
                 ....*....|....*.
gi 506429449 536 DnDNWLQESVAALNGE 551
Cdd:COG0029  507 D-PAWRRHTVLRLDDD 521
sdhA PRK06069
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
67-567 1.95e-58

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 235689 [Multi-domain]  Cd Length: 577  Bit Score: 205.29  E-value: 1.95e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  67 LQGDPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVK--------------LSDERMIFT---SGL 129
Cdd:PRK06069  58 LYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSrrpdgrisqrpfggMSFPRTTFAadkTGF 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 130 DILDALLRKARSL-GVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGM 208
Cdd:PRK06069 138 YIMHTLYSRALRFdNIHFYDEHFVTSLIVENGVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGL 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 209 AMAMRAGAKMGNMEFITFccnvfyDPPiwrgSLAPyvmSLIV--------GGKLTNSEDEEFLNKYDPFVIQTGTftewn 280
Cdd:PRK06069 218 AIAYRAGIPLKDMEFVQF------HPT----GLVP---SGILiteaargeGGYLINKEGERFMKRYAPQKMELAP----- 279
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 281 KSVLSHASMQEIRAGKAGPH-GGIFYSRGDVPW-------ENIEMVASIIFpkwKYKAIDLSAwaqklqdgEPVEVGPAV 352
Cdd:PRK06069 280 RDVVSRAIMTEIMEGRGFKHeSGLCYVGLDLRHlgeekinERLPLIREIAK---KYAGIDPVT--------EPIPVRPAA 348
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 353 EYFEGGICVNEKLET------TIPGLFAAGEC-TLGAFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASDAAYA 424
Cdd:PRK06069 349 HYTMGGIHTDVYGRVltadgeWVRGLWAAGEAaAVSVHGANRLGSnSTAECLVWGRIAGEQAAEYALKRPAPSSPVEKLA 428
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 425 TLEEAA--SVPLTKSQGANPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNARAYNKEWVDALE 502
Cdd:PRK06069 429 EKEEKRifDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRER-YKNVRIEDKSRIYNTDLKDALE 507
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 506429449 503 LPNLVLLLETSVRSALARTESRGVHFREDHPETDNDNWLQESVAALNGEAIEVGHRPITQTAMAP 567
Cdd:PRK06069 508 LDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLAYYTGGGPKVTYTPVTITKWKP 572
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
28-387 3.64e-54

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 190.43  E-value: 3.64e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  28 EKGAKVTLLSKGPLARcGASPMAGADFTLDGASMSKIDGlqgdpSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLR 107
Cdd:COG1053   24 EAGLKVLVLEKVPPRG-GHTAAAQGGINAAGTNVQKAAG-----EDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAID 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 108 ELLDWGVKVKLSDE------------RMIF---TSGLDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLALDvRS 172
Cdd:COG1053   98 WLEAQGVPFSRTPDgrlpqfgghsvgRTCYagdGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVVARD-RT 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 173 GEFIRFKAKAVVMASGG------WHKAFWPN------TGMRDLSGDGMAMAMRAGAKMGNMEFITFCcnVFYDPpiWRGS 240
Cdd:COG1053  177 GEIVRIRAKAVVLATGGfgrnyeMRAEYLPEaegalsTNAPGNTGDGIAMALRAGAALADMEFVQFH--PTGLP--GDGG 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 241 LAPYVMSLIVGGKLTNSEDEEFLNKYDPFviqtgtftewnkSVLSHASMQEIRAG-------------KAGPHGGIFYSR 307
Cdd:COG1053  253 LISEGARGKPGGILVNKEGERFMNEYAPR------------DVVSRAILEEIDEPaylvldlrhrrrlEEYLEAGYLVKA 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 308 G---------DVPWEniEMVASI-IFPKWKYKAID-LSAWAQKLQDG--EPVEVGPAVEYFEGGICVNEKLE------TT 368
Cdd:COG1053  321 DtieelaaklGIDAA--ELAATVaRYNAAAKAGVDpRGTCLGPIKEGpfYAIPVRPGVHYTMGGLRVDADARvldadgTP 398
                        410
                 ....*....|....*....
gi 506429449 369 IPGLFAAGECTLGAFGSNR 387
Cdd:COG1053  399 IPGLYAAGEAAGSVHGANR 417
PRK09231 PRK09231
fumarate reductase flavoprotein subunit; Validated
73-567 8.23e-52

fumarate reductase flavoprotein subunit; Validated


Pssm-ID: 236421 [Multi-domain]  Cd Length: 582  Bit Score: 187.15  E-value: 8.23e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  73 DSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWG----------VKVK----LSDERMIFT---SGLDILDAL 135
Cdd:PRK09231  60 DSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGcpwsrkpdgsVNVRrfggMKIERTWFAadkTGFHMLHTL 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 136 LRkaRSLG----VTFWEDIAmLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMA 211
Cdd:PRK09231 140 FQ--TSLKypqiQRFDEHFV-LDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMA 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 212 MRAGAKMGNMEFitfccnVFYDPPIWRGSLApyvmsLIV------GGKLTNSEDEEFLNKYDpfviqTGTFTEW----NK 281
Cdd:PRK09231 217 YRHGVPLRDMEF------VQYHPTGLPGSGI-----LMTegcrgeGGILVNKDGYRYLQDYG-----LGPETPLgepkNK 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 282 SV-------LSHASMQEIRAGK--AGPHG----------GIFYSRGDVPWenIEMVASiifpkwKYKAIDLSAwaqklqd 342
Cdd:PRK09231 281 YMelgprdkVSQAFWHEWRKGNtiSTPRGdvvyldlrhlGEKKLHERLPF--ICELAK------AYVGVDPVK------- 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 343 gEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGEC-TLGAFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASD 420
Cdd:PRK09231 346 -EPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECsSVGLHGANRLGSnSLAELVVFGRVAGEQAAERAATAGPGNEAA 424
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 421 AAYATLEEAASV-PLTKSQGA-NPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNARAYNKEWV 498
Cdd:PRK09231 425 LDAQAADVEQRLkALVNQEGGeNWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKER-FKRVRITDTSSVFNTDLL 503
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 506429449 499 DALELPNLVLLLETSVRSALARTESRGVHFRED--HPETDNDNWLQESVAALNGE-AIEVGHRPITQTAMAP 567
Cdd:PRK09231 504 YTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDDVNFLKHTLAFYNADgTPRIEYSDVKITKSPP 575
sdhA PRK06452
succinate dehydrogenase flavoprotein subunit; Reviewed
70-567 1.27e-47

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 180567 [Multi-domain]  Cd Length: 566  Bit Score: 175.46  E-value: 1.27e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  70 DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGV--------KVKL------SDERMIFT---SGLDIL 132
Cdd:PRK06452  60 DPNDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWGAlfnrqpdgRVAVryfggqTYPRTRFVgdkTGMALL 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 133 DALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAM 212
Cdd:PRK06452 140 HTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIAL 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 213 RAGAKMGNMEFITFCCNVFYDPPIW-----RGSlapyvmslivGGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHA 287
Cdd:PRK06452 220 RAGAALKDPEFVQFHPTALYPSDVLiseaaRGE----------GGILKNVKGERFMTKYAPKKLDLAP-----RDIVSRA 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 288 SMQEIRAGKAGPHGGIFYSRGDVPWENIEMVASIIFPKWK-YKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVN-EKL 365
Cdd:PRK06452 285 IITEIREGRGFPGGYVGLDLTHLGEEYIKERLALAVEAAKsFAGVDAFT--------EPIPVRPAQHYYMGGIDVDiDGR 356
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 366 ETTIPGLFAAGECT-LGAFGSNRIFS-AITEMLVHGVDAGENAAE--FAKSSAAAAASDAAYATLEEAASVPLTKSQGAN 441
Cdd:PRK06452 357 NPDIVGLFSAGEAAcVSVHGANRLGSnSLLDTLVFGQVTGRTVVQflKSNPGNPTSNYEKEAEKVVDDAYKFVKSESGVH 436
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 442 PAKVRRRLQEAAHAWLGPIRsgeEMDKLLGLTQEIKE--NDLPNLALTSNARAYNKEWVDALELPNLVLLLETSVRSALA 519
Cdd:PRK06452 437 FGQILEKLRDTMWDYVGIYR---DEGGLLNAMSEINKlrGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALE 513
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*...
gi 506429449 520 RTESRGVHFREDHPETDNDNWLQESVAALNGEAIEVGHRPITQTAMAP 567
Cdd:PRK06452 514 RKESRGAHYRTDYPDRDDNNWLKHTIAYLRGNTVEVTFKPVKITRWKP 561
sdhA PRK05945
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
70-567 1.39e-42

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 180319 [Multi-domain]  Cd Length: 575  Bit Score: 161.44  E-value: 1.39e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  70 DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKV-KLSDERMI---F-------------TSGLDIL 132
Cdd:PRK05945  59 DPEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFsRLPDGRIAqraFgghshnrtcyaadKTGHAIL 138
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 133 DALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFwpNTGMRDL--SGDGMAM 210
Cdd:PRK05945 139 HELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVF--NTTSNDYasTGDGLAM 216
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 211 AMRAGAKMGNMEFITFCCNVFYdpPIwrGSLapyvMSLIVGGK---LTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHA 287
Cdd:PRK05945 217 TAIAGLPLEDMEFVQFHPTGLY--PV--GVL----ISEAVRGEgayLINSEGDRFMADYAPSRMELAP-----RDITSRA 283
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 288 SMQEIRAGKA----GPHGGIF-------------YSRGDVPWENIEMVASIifpkwkyKAIDlsawaqklqdgEPVEVGP 350
Cdd:PRK05945 284 ITLEIRAGRGinpdGSAGGPFvyldlrhmgkekiMSRVPFCWEEAHRLVGV-------DAVT-----------EPMPVRP 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 351 AVEYFEGGICVN------EKLETTIPGLFAAGECT-LGAFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASDAA 422
Cdd:PRK05945 346 TVHYCMGGIPVNtdgrvrRSADGLVEGFFAAGECAcVSVHGANRLGSnSLLECVVYGRRTGAAIAEYVQGRKLPEVDEQR 425
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 423 YatLEEAAS---VPLTKSQGANPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNARAYNKEWVD 499
Cdd:PRK05945 426 Y--LKEAKQriqALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQ-YEQIYLDDKGKCWNTELIE 502
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 506429449 500 ALELPNLVLLLETSVRSALARTESRGVHFREDHPETDNDNWLQESVAALNGEAIEVGHRPITQTAMAP 567
Cdd:PRK05945 503 ALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLAYYSPAGIDIQYMPVVITMFEP 570
nadB TIGR00551
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ...
7-533 2.05e-39

L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273131 [Multi-domain]  Cd Length: 489  Bit Score: 150.72  E-value: 2.05e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449    7 ETDVLVIGGGGAGFRAAIGAAEKGaKVTLLSKGPLArcgaspmagadftlDGASMSKIDGLQG--DPSDSMEKVFNDIVT 84
Cdd:TIGR00551   2 EMDVVVIGSGAAGLSAALALAEKG-RVSVITKASVT--------------DSNSYYAQGGIAAalAETDSIDAHVEDTLA 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   85 QGSYLNNQKIVQQYVERAPQCLRELLDWGV--------KVKLSDE-----RMIF----TSGLDILDALLRKARS-LGVTF 146
Cdd:TIGR00551  67 AGAGICDEEAVWFVVSDGSEAVQFLVSHGVtfdrneqgGVALTREgghsyPRIFhagdATGREIIPTLEKHARSePNVNI 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  147 WEDIAMLDLVLEDGAVAGglALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITF 226
Cdd:TIGR00551 147 IEGEFALDLLIETGRCAG--VFVQGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQF 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  227 CCNVFYDPPIWRGSLAPYVMSliVGGKLTNSEDEEFLNKYDPfviqTGTFTEwnKSVLSHASMQEIRAGKAGPhggIFYs 306
Cdd:TIGR00551 225 HPTALIKPRVRYFLITEAVRG--EGAKLVDRDGERFMADRHP----RGELAP--RDIVARAIDMEMAEGGGDC---VFL- 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  307 rgDV-PWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAF 383
Cdd:TIGR00551 293 --DAsGIENFKDRFPTIYAVCRGAGIDPER--------EPIPVAPGAHYTMGGISVDAFGRTTIPGLYAIGEtaCT-GLH 361
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  384 GSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASDAayatleEAASVPLTKSQGANPAKVRRRLQEAAHAWLGPIRS 462
Cdd:TIGR00551 362 GANRLASnSLLECLVFGLRAARTISREPPYASREYQSGV------WDEPRSENPLDRHELQHKMSSLRSVLWNHAGIVRL 435
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 506429449  463 GEEMDKLLGLTQEIKEndlpnlaltsnaraynkEWVDALELPNLVLLLETSVRSALARTESRGVHFREDHP 533
Cdd:TIGR00551 436 EWSLREALRKLVEIQD-----------------EVDERMELSNLKLVAKLVTISALKREESRGAHYRLDYP 489
PLN00128 PLN00128
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
81-560 8.77e-36

Succinate dehydrogenase [ubiquinone] flavoprotein subunit


Pssm-ID: 177739 [Multi-domain]  Cd Length: 635  Bit Score: 142.30  E-value: 8.77e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  81 DIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMIFT-------------------------SGLDILDAL 135
Cdd:PLN00128 114 DTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQrafggqsldfgkggqayrcacaadrTGHAMLHTL 193
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 136 LRKARSLGVTFWEDIAMLDLVL-EDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRA 214
Cdd:PLN00128 194 YGQAMKHNTQFFVEYFALDLIMdSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARA 273
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 215 GAKMGNMEFITFCCNVFYDPP--IWRGSLAPyvmslivGGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHASMQEI 292
Cdd:PLN00128 274 GLPLQDLEFVQFHPTGIYGAGclITEGSRGE-------GGILRNSEGERFMERYAPTAKDLAS-----RDVVSRSMTMEI 341
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 293 RAGK-AGPHGG-IFYSRGDVPWE-------NIEMVASIifpkwkYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNE 363
Cdd:PLN00128 342 REGRgVGPEKDhIYLHLNHLPPEvlkerlpGISETAAI------FAGVDVTK--------EPIPVLPTVHYNMGGIPTNY 407
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 364 KLE----------TTIPGLFAAGECTLGAF-GSNRI-FSAITEMLVHGvDAGENAAEFAKSSAAAAASDAAYATLEEAAS 431
Cdd:PLN00128 408 HGEvvtikgddpdAVVPGLMAAGEAACASVhGANRLgANSLLDIVVFG-RACANRVAEIAKPGEKQKPLPKDAGEKTIAW 486
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 432 V-PLTKSQGANP-AKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNARAYNKEWVDALELPNLVLL 509
Cdd:PLN00128 487 LdKLRNANGSLPtSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDS-FHDVKVTDRSLIWNSDLIETLELENLLIN 565
                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|.
gi 506429449 510 LETSVRSALARTESRGVHFREDHPETDNDNWLQESVAALNGEAIEVGHRPI 560
Cdd:PLN00128 566 ACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEEGKVRLDYRPV 616
PLN02815 PLN02815
L-aspartate oxidase
70-538 2.17e-34

L-aspartate oxidase


Pssm-ID: 215436 [Multi-domain]  Cd Length: 594  Bit Score: 137.92  E-value: 2.17e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  70 DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVK--------VKLSDE------RMIFT---SGLDIL 132
Cdd:PLN02815  79 DPSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASfdhgedgnLHLAREgghshhRIVHAadmTGREIE 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 133 DALLRKARS-LGVTFWEDIAMLDL-VLEDGA---VAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFwPNTGMRDLS-GD 206
Cdd:PLN02815 159 RALLEAVKNdPNITFFEHHFAIDLlTSQDGGsivCHGADVLDTRTGEVVRFISKVTLLASGGAGHIY-PSTTNPLVAtGD 237
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 207 GMAMAMRAGAKMGNMEFITFCCNVFYDP--PI----WRGSlaPYVMSLIV---GGKLTNSEDEEFLNKYD------Pfvi 271
Cdd:PLN02815 238 GIAMAHRAQAVVSNMEFVQFHPTALADEglPIkpakAREN--AFLITEAVrgdGGILYNLAGERFMPLYDeraelaP--- 312
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 272 qtgtftewnKSVLSHASMQEIRAGKAgPHggIFYSRGDVPWENIEMVASIIFPKWKYKAIDLSAwaqklqdgEPVEVGPA 351
Cdd:PLN02815 313 ---------RDVVARSIDDQLKKRNE-KY--VLLDISHKPREEILSHFPNIAAECLKRGLDITK--------QPIPVVPA 372
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 352 VEYFEGGICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAASDAAYAtlEE 428
Cdd:PLN02815 373 AHYMCGGVRTGLQGETNVQGLYAAGEvaCT-GLHGANRLASnSLLEALVFARRAVQPSIDHMARALRDVSAAAAWA--RP 449
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 429 AASVPLTKSQGAN----PAKVRRRLQEAAHAWLGPIRSGEEMdkllgltqEIKENDLPNLALTSNARAYNKEWVDALELP 504
Cdd:PLN02815 450 VAPTALADSVMDEilewTAVVRKELQRIMWNYVGIVRSTERL--------ETAERKLEELEAEWEAILFRHGWKPTMVGL 521
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|
gi 506429449 505 NL------VLLLETSVRSALARTESRGVHFREDHPETDND 538
Cdd:PLN02815 522 EAcemrnlFCVAKLVVSSALARKESRGLHYTTDYPELVES 561
PTZ00139 PTZ00139
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
79-563 5.58e-33

Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional


Pssm-ID: 240286 [Multi-domain]  Cd Length: 617  Bit Score: 133.71  E-value: 5.58e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  79 FNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMIFT-------------------------SGLDILD 133
Cdd:PTZ00139  91 AYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQrafggqslkfgkggqayrcaaaadrTGHAMLH 170
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 134 ALLRKARSLGVTFWEDIAMLDLVL-EDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAM 212
Cdd:PTZ00139 171 TLYGQSLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVS 250
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 213 RAGAKMGNMEFITFCCNVFYDPPIW-----RGSlapyvmslivGGKLTNSEDEEFLNKYDPFVIQTGTftewnKSVLSHA 287
Cdd:PTZ00139 251 RAGLPLQDLEFVQFHPTGIYGAGCLitegcRGE----------GGILRNSEGERFMERYAPTAKDLAS-----RDVVSRA 315
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 288 SMQEIRAGKA-GP---HggIFYSRGDVPWENIE------MVASIIFpkwkyKAIDLSAwaqklqdgEPVEVGPAVEYFEG 357
Cdd:PTZ00139 316 MTIEILEGRGcGPnkdH--IYLDLTHLPPETLHerlpgiSETAKIF-----AGVDVTK--------EPIPVLPTVHYNMG 380
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 358 GICVNEKLET----------TIPGLFAAGECTLGAF-GSNRI-FSAITEMLVHGVDAGENAAEFAKSSAAAAASDAAYAt 425
Cdd:PTZ00139 381 GIPTNWKTQVltqrngdddkIVPGLLAAGEAACASVhGANRLgANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAG- 459
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 426 leEAASVPLTKSQGAN----PAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKeNDLPNLALTSNARAYNKEWVDAL 501
Cdd:PTZ00139 460 --EASIARLDKIRHNKgdisTAQIRKRMQRTMQKHAAVFRIGESLQEGVEKIKEIY-SDFKDVKIKDKSLVWNTDLIETL 536
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 506429449 502 ELPNLVLLLETSVRSALARTESRGVHFREDHPETDNDNWLQESVAAL---NGEAIEVGHRPITQT 563
Cdd:PTZ00139 537 ELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWMKHTLSYIrdvKKGKVRLTYRPVITT 601
PRK08275 PRK08275
putative oxidoreductase; Provisional
1-540 7.30e-33

putative oxidoreductase; Provisional


Pssm-ID: 181346 [Multi-domain]  Cd Length: 554  Bit Score: 132.87  E-value: 7.30e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   1 MTQNYLETDVLVIGGGGAGFRAAIGAAEK--GAKVTLLSKGPLARCGASPMAgadftLDGASMSKIDGlQGDPSDSMEK- 77
Cdd:PRK08275   3 MNTQEVETDILVIGGGTAGPMAAIKAKERnpALRVLLLEKANVKRSGAISMG-----MDGLNNAVIPG-HATPEQYTKEi 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  78 -VFND-IVtqgsylnNQKIVQQYVERAPQCLRELLDWGVKVKlSDERMIFT---------------SGLDILDALLRKAR 140
Cdd:PRK08275  77 tIANDgIV-------DQKAVYAYAEHSFETIQQLDRWGVKFE-KDETGDYAvkkvhhmgsyvlpmpEGHDIKKVLYRQLK 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 141 SLGVTFWEDI-AMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMrdL---------SGDGMAM 210
Cdd:PRK08275 149 RARVLITNRImATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLGLPASGY--LfgtyenptnAGDGYAM 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 211 AMRAGAKMGNMEFitFCCNvfydPPI--WRGSLAPYVMSLIvGGKLTNSEDEEFLNKYDPfviqtgtftewnksvlSHAS 288
Cdd:PRK08275 227 AYHAGAELANLEC--FQIN----PLIkdYNGPACAYVTGPL-GGYTANAKGERFIECDYW----------------SGQM 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 289 MQEIRAGKAGPHGGIFYSRGDVPWENIEMVASIIF----PKWKY----KAIDlsaWAQKLQDGEPVEVGPAVEYFEGGIC 360
Cdd:PRK08275 284 MWEFYQELQSGNGPVFLKLDHLAEETIQTIETILHtnerPSRGRfhegRGTD---YRQQMVEMHISEIGFCSGHSASGVW 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 361 VNEKLETTIPGLFAAGEctLGAFGSNRIFSAitemLVHGVDAGENAAEFAKSSAAAAASDAAYATLEEAASVPLTKSQGA 440
Cdd:PRK08275 361 VNEKAETTVPGLYAAGD--MASVPHNYMLGA----FTYGWFAGENAAEYVAGRDLPEVDAAQVEAERARVLAPLHREDGL 434
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 441 NPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKEnDLPNLaltsnaRAYN-KEWVDALELPNLVLLLETSVRSALA 519
Cdd:PRK08275 435 PPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIRE-DLERI------KARDpHELMRALEVSSIRDCAEMAARASLF 507
                        570       580
                 ....*....|....*....|...
gi 506429449 520 RTESR-GV-HFREDHPETDNDNW 540
Cdd:PRK08275 508 RTESRwGLyHYRVDFPERNDAEW 530
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
9-387 1.00e-32

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 129.72  E-value: 1.00e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449    9 DVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARcGASPMAGAdfTLDGASmskiDGLQGDPsDSMEKVFNDIVTQGSY 88
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFG-GATAWSSG--GIDALG----NPPQGGI-DSPELHPTDTLKGLDE 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   89 LNNQKIVQQYVERAPQCLRELLDWGVKVK------------------------LSDERMIFTSGLDILDALLRKARSLGV 144
Cdd:pfam00890  73 LADHPYVEAFVEAAPEAVDWLEALGVPFSrtedghldlrplgglsatwrtphdAADRRRGLGTGHALLARLLEGLRKAGV 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  145 TFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAK-AVVMASGGW---------HKAFWPNTGMRDLSGDGMAMAMRA 214
Cdd:pfam00890 153 DFQPRTAADDLIVEDGRVTGAVVENRRNGREVRIRAIaAVLLATGGFgrlaelllpAAGYADTTNPPANTGDGLALALRA 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  215 GAKMGN--MEFITFCcnvfydPPIWRGSLAPYVMsLIV-----GGKLTNSEDEEFLNKYDPfviqtgtfteWNksVLSHA 287
Cdd:pfam00890 233 GAALTDdlMEFVQFH------PTSLVGIRLGSGL-LIEalrgeGGILVNKDGRRFMNELAS----------RD--VVSRA 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  288 SMQEIRAGKAGPHGGIFYSrGDVPWENIEmvASiiFPKWKYKAIDLSawaqklqDG----EPVEVGPAVEYFEGGICVNE 363
Cdd:pfam00890 294 ITRNEIDEGRGANVYLDAS-GSLDAEGLE--AT--LPAINEEAIFGL-------DVdpydRPIPVFPAQHYTMGGVRTDE 361
                         410       420       430
                  ....*....|....*....|....*....|.
gi 506429449  364 KLET------TIPGLFAAGECTLGAF-GSNR 387
Cdd:pfam00890 362 NGRVldadgqPIPGLYAAGEVACGGVhGANR 392
PRK07804 PRK07804
L-aspartate oxidase; Provisional
28-561 7.60e-31

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 126.62  E-value: 7.60e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  28 EKGAKVTLLSKGPLARcGASPMAgadftldgasmskidglQG------DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVER 101
Cdd:PRK07804  37 RAGRRVLVVTKAALDD-GSTRWA-----------------QGgiaavlDPGDSPEAHVADTLVAGAGLCDPDAVRSLVAE 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 102 APQCLRELLDWGVKVKLSDE-RMIFT-----------------SGLDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVA 163
Cdd:PRK07804  99 GPRAVRELVALGARFDESPDgRWALTregghsrrrivhaggdaTGAEVQRALDAAVRADPLDIREHALALDLLTDGTGAV 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 164 GGLALDVRsGEFIR-----FKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDPPIWR 238
Cdd:PRK07804 179 AGVTLHVL-GEGSPdgvgaVHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFLGPAAG 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 239 GSLaPYVMSLI--VGGKLTNSEDEEF------LNKYDPfviqtgtftewnKSVLSHASMQEIRAGKAgPHggiFY--SRG 308
Cdd:PRK07804 258 GQR-PLISEAVrgEGAILVDAQGNRFmagvhpLADLAP------------RDVVAKAIDRRMKATGD-DH---VYldARG 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 309 dvpwenIEMVASIiFPkwkykaidlSAWAQKLQDG-----EPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlG 381
Cdd:PRK07804 321 ------IEGFARR-FP---------TITASCRAAGidpvrQPIPVAPAAHYSCGGVVTDVYGRTSVPGLYAAGEvaCT-G 383
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 382 AFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAaaaasdaayatlEEAASVPLTKSQGANPAKVRRRLQEAAHAWLGPI 460
Cdd:PRK07804 384 VHGANRLASnSLLEGLVVGERAGAAAAAHAAAAG------------RPRATPAVGPEPGLLPALDRAELQRAMTRGAGVL 451
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 461 RSGE-------EMDKLLGLTQEIKENDLPNLALTSNARAYnkewvdalelpnlvllletsVRSALARTESRGVHFREDHP 533
Cdd:PRK07804 452 RSAAglaraadRLAAGAPARVVPGRADWEDTNLTLVARAL--------------------VAAALARTESRGCHWREDFP 511
                        570       580
                 ....*....|....*....|....*...
gi 506429449 534 ETDnDNWLQESVAALNGEAIEVGHRPIT 561
Cdd:PRK07804 512 DTD-DEWARSIVVRLADDGNLVVVQALV 538
PRK08071 PRK08071
L-aspartate oxidase; Provisional
71-540 2.84e-28

L-aspartate oxidase; Provisional


Pssm-ID: 236147 [Multi-domain]  Cd Length: 510  Bit Score: 118.55  E-value: 2.84e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  71 PSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVK--------VKLSDE-----RMIFTSGLD-----IL 132
Cdd:PRK08071  54 TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPfdgdetgpLHLGKEgahrkRRILHAGGDatgknLL 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 133 DALLRKARSlGVTFWEDIAMLDLVLEDGAVAGGLALDvRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAM 212
Cdd:PRK08071 134 EHLLQELVP-HVTVVEQEMVIDLIIENGRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAY 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 213 RAGAKMGNMEFITFCCNVFYdppiwRGSLAPYVMSLIV---GGKLTNSEDEEFLN----KYD--PfviqtgtftewnKSV 283
Cdd:PRK08071 212 RAGAELVDLEFIQFHPTMLY-----ANGRCVGLVSEAVrgeGAVLINEDGRRFMMgihpLADlaP------------RDV 274
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 284 LSHASMQEIRAGkagphggifysrGDVpWENIEMVASiiFPKwKYKAIdlSAWAQKlqDGEPVEVG-----PAVEYFEGG 358
Cdd:PRK08071 275 VARAIHEELLSG------------EKV-YLNISSIQN--FEE-RFPTI--SALCEK--NGVDIETKripvvPGAHFLMGG 334
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 359 ICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS-AITEMLVHGVDAGENAAEFAKSSAAAAAsdaayatleeaaSVPLT 435
Cdd:PRK08071 335 VKTNLDGETSIPGLYAIGEvaCT-GVHGANRLASnSLLEGLVFGKRAAEHILTKATKPRLNPF------------AEKEK 401
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 436 KSQGANPAKVRRRLQEAAHAWLGPIRSGEEMDKLLG-LTQEIKENDLPNLALTSNARAynkewvdalelpnlvlllETS- 513
Cdd:PRK08071 402 KFIVLNHLPTKEEIQEKMMKYVGIVRTEQSLSEAKRwLEKYGVRNMILDHDALTNEEI------------------ELSh 463
                        490       500       510
                 ....*....|....*....|....*....|....*
gi 506429449 514 --------VRSALARTESRGVHFREDHPetdNDNW 540
Cdd:PRK08071 464 mltvakliVVSALQRTESRGGHYRSDYP---HRNW 495
PRK07395 PRK07395
L-aspartate oxidase; Provisional
55-540 1.46e-27

L-aspartate oxidase; Provisional


Pssm-ID: 236010 [Multi-domain]  Cd Length: 553  Bit Score: 117.07  E-value: 1.46e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  55 TLDGASMSKIDGLQG------DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELLDWGVKVKLSDERMIFT-- 126
Cdd:PRK07395  38 TKDTLKTSASDWAQGgiaaaiAPDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRHGQHLALTle 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 127 --------------SGLDILDALLRKARSLG-VTFWEDIAMLDLVLE-DGAVAGGLALDvRSGEFIRFKAKAVVMASGGW 190
Cdd:PRK07395 118 aahsrprvlhaadtTGRAIVTTLTEQVLQRPnIEIISQALALSLWLEpETGRCQGISLL-YQGQITWLRAGAVILATGGG 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 191 HKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFccnvfyDPPIWRGSLAP-YVMSLIV---GGKLTNSEDEEFLNKY 266
Cdd:PRK07395 197 GQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQF------HPTALTKPGAPrFLISEAVrgeGAHLVDAQGRRFAFDY 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 267 DPfviqTGTFTEwnKSVLSHASMQEIRAGKAGP-HGGIFYSRGDVPWENIEMVasiiFP-------KWkykAIDLsawaq 338
Cdd:PRK07395 271 HP----AGELAP--RDVVSRAIFSHLQKTATDPaTAHVWLDLRPIPAERIRRR----FPniirvcqKW---GIDV----- 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 339 kLQdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS-AITEMLVHgvdAGENAAEFAKSSAA 415
Cdd:PRK07395 333 -FQ--EPIPVAPAAHYWMGGVVTDLNNQTSIPGLYAVGEtaST-GVHGANRLASnSLLECLVF---AAQLAQLELPIEPP 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 416 AAASDAAYATLEEAASvplTKSQGANPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKEnDLPNLALT-------- 487
Cdd:PRK07395 406 ASPDLPPISFIIDASQ---WKNEQEQIQRIRQELPELVWQSAGICREADTLERAIAQVEQWQQ-QLAALPLSqflanlpp 481
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 488 --------SNARAYNKEWvdalelpnlvllLETS---------VRSALARTESRGVHFREDHPETDNdNW 540
Cdd:PRK07395 482 gqtvsfngPDAEQQLRLW------------AETRnlldiayliLKSALFRTESRGGHYRLDYPQTDP-AW 538
Succ_DH_flav_C pfam02910
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ...
446-569 4.88e-26

Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.


Pssm-ID: 460743 [Multi-domain]  Cd Length: 129  Bit Score: 103.29  E-value: 4.88e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  446 RRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKEnDLPNLALTSNARAYNKEWVDALELPNLVLLLETSVRSALARTESRG 525
Cdd:pfam02910   1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRE-RYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRG 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 506429449  526 VHFREDHPETDNDNWLQESVAALNGEA--IEVGHRPITQTAMAPPG 569
Cdd:pfam02910  80 AHAREDYPERDDENWLKHTLAYYDGDDggPRLEYEPVTFTTLFPPK 125
PRK09077 PRK09077
L-aspartate oxidase; Provisional
31-538 1.40e-25

L-aspartate oxidase; Provisional


Pssm-ID: 236374 [Multi-domain]  Cd Length: 536  Bit Score: 110.77  E-value: 1.40e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  31 AKVTLLSKGPLArcgaspmagadftlDGASmskiDGLQG------DPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQ 104
Cdd:PRK09077  31 RRVAVLSKGPLS--------------EGST----FYAQGgiaavlDETDSIESHVEDTLIAGAGLCDEDAVRFIAENARE 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 105 CLRELLDWGVKVKLSDE------------------RMIFT---SGLDILDALLRKARSL-GVTFWEDIAMLDLV------ 156
Cdd:PRK09077  93 AVQWLIDQGVPFTTDEQangeegyhltregghshrRILHAadaTGKAVQTTLVERARNHpNITVLERHNAIDLItsdklg 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 157 LEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDppi 236
Cdd:PRK09077 173 LPGRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYH--- 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 237 wrgslaPYVMSLIV-------GGKLTNSEDEEFLNKYDP--------FVIQTGTFtEWNKSVL-------SHASMQEIRA 294
Cdd:PRK09077 250 ------PQARSFLItealrgeGAYLKLPDGTRFMPDFDEraelaprdIVARAIDH-EMKRLGAdcvyldiSHKPADFIRQ 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 295 gkagpHGGIFYSR----GdvpweniemvasiifpkwkykaIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIP 370
Cdd:PRK09077 323 -----HFPTIYERclelG----------------------IDITK--------EPIPVVPAAHYTCGGVMVDLHGRTDLD 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 371 GLFAAGE--CTlGAFGSNRIFS-AITEMLVHGVDAGENaaefakssaaaaaSDAAYATLEEAASVPL-TKSQGANP---- 442
Cdd:PRK09077 368 GLYAIGEvsYT-GLHGANRMASnSLLECLVYGRSAAED-------------ILSRLPKAPMPPTLPAwDESRVTDSdeev 433
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 443 ------AKVRR-------------RLQEAAHawlgpirsgeemdKLLGLTQEIKE--------NDL---PNLALTSnara 492
Cdd:PRK09077 434 viqhnwHELRLfmwdyvgivrttkRLERALH-------------RIRLLQQEIDEyyanfrvsNNLlelRNLVQVA---- 496
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....*.
gi 506429449 493 ynkewvdalelpnlvlllETSVRSALARTESRGVHFREDHPETDND 538
Cdd:PRK09077 497 ------------------ELIVRCAMERKESRGLHYTLDYPELLPE 524
PRK08626 PRK08626
fumarate reductase flavoprotein subunit; Provisional
8-569 7.24e-25

fumarate reductase flavoprotein subunit; Provisional


Pssm-ID: 181507 [Multi-domain]  Cd Length: 657  Bit Score: 109.30  E-value: 7.24e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   8 TDVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARC-GASPMAGADFTLDGASMSkidglQGDPSDSMekvFNDIVTQG 86
Cdd:PRK08626   6 TDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRShSAAAQGGMQASLGNAVKG-----EGDNEDVH---FADTVKGS 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  87 SYLNNQKIVQQYVERAPQCLRELLDWGV-----------------KVKLSDE------------------RMIFTS---G 128
Cdd:PRK08626  78 DWGCDQEVARMFVHTAPKAVRELAAWGVpwtrvtagprtvvingeKVTITEKeeahglinardfggtkkwRTCYTAdgtG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 129 LDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGM 208
Cdd:PRK08626 158 HTMLYAVDNEAIKLGVPVHDRKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGA 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 209 AMAMRAG-AKMGNMEFITFccnvfyDP----PIW-------RGSlapyvmslivGGKLTNSEDEEFLNKYDPfviqtgtf 276
Cdd:PRK08626 238 AIALETGvAPLGNMEAVQF------HPtaivPSGilvtegcRGD----------GGLLRDKDGYRFMPDYEP-------- 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 277 tEWN----KSVLSHASMQEIRAGKagphgGIFYSRGDVPWENIemvaSIIFPKWKYKAI-DLSAWAQKLQDGEPVE---- 347
Cdd:PRK08626 294 -EKKelasRDVVSRRMTEHIRKGK-----GVKSPYGPHLWLDI----RILGRKHIETNLrEVQEICENFLGIDPAKdwip 363
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 348 VGPAVEYFEGGICVNEKLET-TIPGLFAAGE--C-TLGAFgsNRIF-SAITEMLVHGVDAGENAAEFAKSSAAAAASDAA 422
Cdd:PRK08626 364 VRPTQHYSMGGIRTNPTGESyGLKGLFSAGEaaCwDMHGF--NRLGgNSLAETVVAGMIVGKYVADFCLGNELEIDTALV 441
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 423 YATL--EEAASVPLTKSQGA-NPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENDLpNLALTSNARAYNKEWVD 499
Cdd:PRK08626 442 EKFVkkQQDRIDELIAGEGKeNVFEIKNEMQEIMMEKVGIFRNGPELEKAVKELQELLERSK-NIGLKSKKRGANPELEE 520
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 506429449 500 ALELPNLVLLLETSVRSALARTESRGVHFREDHPETDNDNWLQESVAAL-NGEAI--EVGHRPITQTAMA-PPG 569
Cdd:PRK08626 521 ALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRNDRDWLNRTLASWpEGEALepTLEYEPLDVMKMElPPG 594
PRK07512 PRK07512
L-aspartate oxidase; Provisional
32-536 8.59e-25

L-aspartate oxidase; Provisional


Pssm-ID: 236036 [Multi-domain]  Cd Length: 513  Bit Score: 108.07  E-value: 8.59e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  32 KVTLLSKGPLARcGASP------MAgadftldgASMSkidglqgdPSDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQC 105
Cdd:PRK07512  32 PVVVLSPAPLGE-GASSawaqggIA--------AALG--------PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAA 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 106 LRELLDWGV--------KVKLSDE-----RMIF-----TSGLDILDALLRKARSL-GVTFWEDIAMLDLVLEDGAVAGGL 166
Cdd:PRK07512  95 IEDLLRLGVpfdrdadgRLALGLEaahsrRRIVhvggdGAGAAIMRALIAAVRATpSITVLEGAEARRLLVDDGAVAGVL 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 167 AldVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITF---CCNVFYDPpiwrgslap 243
Cdd:PRK07512 175 A--ATAGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFhptAIDIGRDP--------- 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 244 yvMSLIV------GGKLTNSEDEEFLNKYDPFviqtgtfTEWN-KSVLSHASMQEIRAGkagphGGIFYsrgdvpwENIE 316
Cdd:PRK07512 244 --APLATealrgeGAILINEDGERFMADIHPG-------AELApRDVVARAVFAEIAAG-----RGAFL-------DARA 302
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 317 MVASIiFPKwKYKAIDLSAWAQKLQDG-EPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGECT-LGAFGSNRIFS-AIT 393
Cdd:PRK07512 303 ALGAH-FAT-RFPTVYAACRSAGIDPArQPIPVAPAAHYHMGGIAVDADGRSSLPGLWAAGEVAsTGLHGANRLASnSLL 380
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 394 EMLVHGVDAGENAAEFAKSSAAaaasdaayaTLEEAASVPLTksqGANPAKVRRRLQEAahawLGPIRSGEEMDKLLGLT 473
Cdd:PRK07512 381 EAVVFAARAAEDIAGTPAAAAA---------PLSAAAAPALD---PADLALLRPIMSRH----VGVLRDADGLRRAIAAL 444
                        490       500       510       520       530       540
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 506429449 474 QEIKENDLPNLALTSNARAYnkewvdalelpnlvllletsVRSALARTESRGVHFREDHPETD 536
Cdd:PRK07512 445 LPLEAGAGPAADPATVALLI--------------------AVAALAREESRGAHFRTDFPLTA 487
PRK06175 PRK06175
L-aspartate oxidase; Provisional
29-397 1.41e-24

L-aspartate oxidase; Provisional


Pssm-ID: 180442 [Multi-domain]  Cd Length: 433  Bit Score: 106.69  E-value: 1.41e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  29 KGAKVTLLSKGPLARCGASPMAGadftldGASMSKIDglqgdpsDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRE 108
Cdd:PRK06175  25 KDLKILMVSKGKLNECNTYLAQG------GISVARNK-------DDITSFVEDTLKAGQYENNLEAVKILANESIENINK 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 109 LLDWGVKVKLSDERMIFT----------------SGLDILDALLRKA-RSLGVTFWEDIAMLDLVLEDGAVAGGLALdvR 171
Cdd:PRK06175  92 LIDMGLNFDKDEKELSYTkegahsvnrivhfkdnTGKKVEKILLKKVkKRKNITIIENCYLVDIIENDNTCIGAICL--K 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 172 SGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDPPIWRGSlapYVMSLIV- 250
Cdd:PRK06175 170 DNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIEGKK---FLISESVr 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 251 --GGKLTNSEDEEFLNKYDPfviqtgtftewnKSVLSHASMQEIRagkagphggifysRGDVPWENIEMVA--------- 319
Cdd:PRK06175 247 geGGKLLNSKGERFVDELLP------------RDVVTKAILEEMK-------------KTGSNYVYLDITFldkdflknr 301
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 320 -SIIFPKWKYKAIDLSAwaqklqdgEPVEVGPAVEYFEGGICVNEKLETTIPGLFAAGE--CTlGAFGSNRIFS-AITEM 395
Cdd:PRK06175 302 fPTIYEECLKRGIDITK--------DAIPVSPAQHYFMGGIKVDLNSKTSMKNLYAFGEvsCT-GVHGANRLASnSLLEG 372

                 ..
gi 506429449 396 LV 397
Cdd:PRK06175 373 LV 374
flavo_cyto_c TIGR01813
flavocytochrome c; This model describes a family of redox proteins related to the succinate ...
31-404 1.56e-21

flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]


Pssm-ID: 273816 [Multi-domain]  Cd Length: 439  Bit Score: 97.41  E-value: 1.56e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   31 AKVTLLSKGPLARcGASPMAGADFTLDGASMSKIDGLQgdpsDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLRELL 110
Cdd:TIGR01813  24 ANVVLLEKMPVIG-GNSAIAAGGMNAAGTDQQKALGIE----DSPELFIKDTLKGGRGINDPELVRILAEESKDAVDWLQ 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  111 DwGVKVKLSD---------ERMIFT-----SGLDILDALLRKARSLGVTFWEDIAMLDLVL-EDGAVAGGLALDVRSGEF 175
Cdd:TIGR01813  99 D-GVGARLDDliqlgghsvPRAHRPtggaaSGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVKGKGKGIY 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  176 IRfKAKAVVMASGGWH------KAFWPN------TGMRDLSGDGMAMAMRAGAKMGNMEFITFCCNVFYDPpiwrGSLAP 243
Cdd:TIGR01813 178 IK-AAKAVVLATGGFGsnkemiAKYDPTlkhlgsTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTASPDE----GGFLI 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  244 YVMSLIVGGKLTNSEDEEFLNKY----------------DPFVIqtgtfteWNKSVLSHASMQEiragkagphggiFYSR 307
Cdd:TIGR01813 253 SEAVRGYGAILVNKTGERFMNELatrdkvsdailaqpgkDAYLI-------FDDDVYKKAKMVD------------NYYR 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  308 GDVPW--ENIEMVAsiifpkwKYKAIDLSAWAQKLQD-----------------GEP----------VEVGPAVEYFEGG 358
Cdd:TIGR01813 314 LGVAYkgDSLEELA-------KQFGIPAAALKQTIKDyngyvasgkdtpfgrpmDMPtdlskapyyaIKVTPGVHHTMGG 386
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 506429449  359 ICVNEKLE------TTIPGLFAAGECTLGAFGSNRIF-SAITEMLVHGVDAGE 404
Cdd:TIGR01813 387 VKINTKAEvldangKPIPGLFAAGEVTGGVHGANRLGgNAIADCIVFGRIAGE 439
PRK08401 PRK08401
L-aspartate oxidase; Provisional
28-533 1.41e-20

L-aspartate oxidase; Provisional


Pssm-ID: 236259 [Multi-domain]  Cd Length: 466  Bit Score: 94.87  E-value: 1.41e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  28 EKGAKVTLLskGPLARCGASPMAGAdftldGASMSKIDGlqgdpsDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLR 107
Cdd:PRK08401  22 KKGFDVTII--GPGIKKSNSYLAQA-----GIAFPILEG------DSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYD 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 108 ELLDWGVKVKLSDER------MIFT----SGLDILDALLRKARSLGVTFWEDIAmldlvlEDGAVAGGLALDV-RSGEFI 176
Cdd:PRK08401  89 FLTSLGLEFEGNELEgghsfpRVFTikneTGKHIIKILYKHARELGVNFIRGFA------EELAIKNGKAYGVfLDGELL 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 177 RFKAkaVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFccnvfyDPPIWRGSLAPYVMSLIV---GGK 253
Cdd:PRK08401 163 KFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQF------HPTGFIGKRGTYLISEAVrgaGAK 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 254 LTNSEDEEFLNKYDPfviqtgtftewnKSVLSHASMQEIRAGKagphgGIFYSRGDVpwENIEMVASIIFPKWKYKAIDL 333
Cdd:PRK08401 235 LVTGDGERFVNELET------------RDIVARAIYRKMQEGK-----GVFLDATGI--EDFKRRFPQIYAFLRKEGIDP 295
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 334 SawaqklQDGEPVEvgPAVEYFEGGICVNEKLETTIPGLFAAGECTLGAF-GSNRIFS-AITEMLVHGVDAGENAAEFAK 411
Cdd:PRK08401 296 S------RDLIPVT--PIAHYTIGGISVDTFYRTGIKNLYAIGEAASNGFhGANRLASnSLLECIVSGLEVARTISRERP 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 412 SsaaaaasdaayatLEEAASVPLTKSQGANPAKVRRRLQEaaHAwlGPIRSGEEMDKLLGLTQEIkENDlPNLALTSNAr 491
Cdd:PRK08401 368 K-------------LREVKEPPYHGYELGDVDSIREILWN--HA--GIVRSEESLREGLKKLEGI-EAD-PRLKLLAKG- 427
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 506429449 492 aynkewvdalelpnlvllletSVRSALARTESRGVHFREDHP 533
Cdd:PRK08401 428 ---------------------VLECALAREESRGAHYREDFP 448
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
141-541 1.62e-20

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 95.37  E-value: 1.62e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 141 SLGVTFWEDIAMLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGG-------------WHKAFWP--NTgmrdlsG 205
Cdd:PRK06854 145 ALGDNVLNRVFITDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiyrprspgegRGRMWYPpfNT------G 218
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 206 DGMAMAMRAGAKMGNME--FITFCCNVFYDPPiwrGSLApyvmsLIVGGKLTNSEDEEFLNKYDPfVIQTGTFTEWNK-- 281
Cdd:PRK06854 219 SGYAMGIRAGAEMTTFEnrFIPLRFKDGYGPV---GAWF-----LLFKAKAVNALGEEYEAKNAA-ELKKYVPYADYKpi 289
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 282 --SVLSHASMQEIRAGKaGPhggifysrgdvpwenIEMVASIIFPKwkyKAIDLSAW--------AQKL----QDGEP-- 345
Cdd:PRK06854 290 ptCLRNYATVEENKAGR-GP---------------IYMDTEEALQD---KHLESELWedfldmtpGQALlwaaQNIEPee 350
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 346 --VEVGPAVEYFEG------GICVN-------------EKLETTIPGLFAAGECT--------LGAFGSNRIFS-AITEM 395
Cdd:PRK06854 351 enSEIMGTEPYIVGshsgasGYWVSgpedwvpeeykwgYNRMTTVEGLFAAGDVVggsphkfsSGSFAEGRIAAkAAVRY 430
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 396 LVHGVDAGENAAEFAKSSAAAAASDAAYATLE--EAASVPLTKSQGANPAKVRRRLQEAAHAWLGPIR-----SGEEMDK 468
Cdd:PRK06854 431 ILDNKDEKPEIDDDQIEELKKEIYAPLERYEEfkDYSTDPDVNPNYISPEQLEERLQKIMDEYAGGIStnyttNEKLLEI 510
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 469 LLGLTQEIKEnDLPNLALTSN---ARAY-NKE--WVdalelpnlvllLETSVRSALARTESR--GVHFREDHPETDNDNW 540
Cdd:PRK06854 511 ALELLEMLEE-DSEKLAARDLhelMRCWeLKHrlLV-----------AEAHIRHLLFRKETRwpGYYERADYPGKDDENW 578

                 .
gi 506429449 541 L 541
Cdd:PRK06854 579 K 579
PRK13800 PRK13800
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
6-540 5.56e-19

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 237512 [Multi-domain]  Cd Length: 897  Bit Score: 91.06  E-value: 5.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   6 LETDVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARCGASPMAgadftLDGASMSKIDGlQGDPSDSMEKVF--ND-I 82
Cdd:PRK13800  12 LDCDVLVIGGGTAGTMAALTAAEHGANVLLLEKAHVRHSGALAMG-----MDGVNNAVIPG-KAEPEDYVAEITraNDgI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  83 VtqgsylnNQKIVQQYVERAPQCLRELLDWGVKVKlSDE------RMIFTS---------GLDILDALLRKARSLGVTfw 147
Cdd:PRK13800  86 V-------NQRTVYQTATRGFAMVQRLERYGVKFE-KDEhgeyavRRVHRSgsyvlpmpeGKDVKKALYRVLRQRSMR-- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 148 EDIAMLDLVL------EDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGM-------RDLSGDGMAMAMRA 214
Cdd:PRK13800 156 ERIRIENRLMpvrvltEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLGLPASGYlygtyenPTNAGDGYSMAYHA 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 215 GAKMGNMEfitfCCNVfyDPPI--WRGSLAPYVMSLIvGGKLTNSEDEEFLNKydpfviqtgtfTEWnksvlSHASMQEI 292
Cdd:PRK13800 236 GAELSGIE----CFQI--NPLIkdYNGPACAYVANPF-GGYQVNAQGERFVDS-----------DYW-----SGQMMAEV 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 293 RAGKAGPHGGIFYSRGDVPWENIEMVASIIFPKWK-------------YKAIDLSAWAQklqdgepvEVGPAVEYFEGGI 359
Cdd:PRK13800 293 KREIESARGPIYLKVSHLPEETLSALESILHTTERptrgtfhanrghdYRTHDIEMHIS--------EIGLCSGHSASGV 364
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 360 CVNEKLETTIPGLFAAGEctLGAFGSNRIFSAitemLVHGVDAGENAAEFAKSSAAAAASDAAYatLEEAASV---PLTK 436
Cdd:PRK13800 365 WVDEHARTTVPGLYAAGD--LACVPHNYMIGA----FVFGDLAGAHAAGTLAEVPAPGELPADQ--LAEAHELiyrPLRH 436
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 437 SQGANPAKVRRRLQEAAHAWLGPIRSGEEmdklLGLTQEIKENDLPNLAlTSNARAYNkEWVDALELPNLVLLLETSVRS 516
Cdd:PRK13800 437 PDGPPQPQVEYKLRRFVNDYVAPPKTAAK----LSIAVETFERMAAEIA-GMGARTPH-ELMRCAEVSFIRDCAEMAARS 510
                        570       580
                 ....*....|....*....|....*.
gi 506429449 517 ALARTESR-GV-HFREDHPETDNDNW 540
Cdd:PRK13800 511 SLTRTESRwGLyHDRADLPERDDASW 536
sdhA PRK08641
succinate dehydrogenase flavoprotein subunit; Reviewed
28-554 3.37e-18

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 236319 [Multi-domain]  Cd Length: 589  Bit Score: 88.11  E-value: 3.37e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  28 EKGAKVTLLSKGPLARcgaSPMAGADFTLDGASMSKIDGlqgdpsDSMEKVFNDIVTQGSYLNNQKIVQQYVERAPQCLr 107
Cdd:PRK08641  24 EAGVHVDLFSLVPVKR---SHSVCAQGGINGAVNTKGEG------DSPWIHFDDTVYGGDFLANQPPVKAMCEAAPGII- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 108 ELLD-WGVKVKLSDE--------------RMIF---TSGLDILDAL---LRKARSLG-VTFWEDIAMLDLVL-EDGAVAG 164
Cdd:PRK08641  94 HLLDrMGVMFNRTPEglldfrrfggtlhhRTAFagaTTGQQLLYALdeqVRRYEVAGlVTKYEGWEFLGAVLdDEGVCRG 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 165 GLALDVRSGEFIRFKAKAVVMASGGWHKAFWPNTGMRDLSGDGMAMAMRAGAKMGNMEFITFCCN--------------- 229
Cdd:PRK08641 174 IVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTaipgddklrlmsesa 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 230 --------VFYDPPIWR---------GSLAPY------VMSLIVGGKL-TNSEDEEFLNkydpfviqtgtftewnksvLS 285
Cdd:PRK08641 254 rgeggrvwTYKDGKPWYfleekypayGNLVPRdiatreIFDVCVEQKLgINGENMVYLD-------------------LS 314
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 286 HASMQEIRAgKAGphgGIF--YSR--GDVPweniemvasiifpkwkykaidlsawaQKLqdgePVEVGPAVEYFEGGICV 361
Cdd:PRK08641 315 HKDPKELDI-KLG---GILeiYEKftGDDP--------------------------RKV----PMKIFPAVHYSMGGLWV 360
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 362 NEKLETTIPGLFAAGECTLGAFGSNRI-----FSAITEMLVHGVDAGENAAEFAKSSAAAAASDAAYATLEEAASVP--L 434
Cdd:PRK08641 361 DYDQMTNIPGLFAAGECDYSYHGANRLganslLSAIYGGMVAGPNAVEYIKGLGKSADDVSSSVFEQALKQEQEKFDniL 440
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 435 TKSQGANPAKVRRRLQEAAHAWLGPIRSGEEMDKLLGLTQEIKENdLPNLALTSNARAYNKEWVDALELPNLVLLLETSV 514
Cdd:PRK08641 441 SMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQELMER-YKRISVNDTSRWSNQGASFTRQLWNMLELARVIT 519
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|
gi 506429449 515 RSALARTESRGVHFREDHPETDNDNWLQESVAALNGEAIE 554
Cdd:PRK08641 520 IGALNRNESRGAHYKPEFPERNDENWLKTTMATYTPEGEE 559
PRK06481 PRK06481
flavocytochrome c;
9-404 3.35e-11

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 65.63  E-value: 3.35e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   9 DVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGPLARcGASPMAGADFTldgASMSKIDGLQGdPSDSMEKVFNDIVTQGSY 88
Cdd:PRK06481  63 DIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAG-GNTMKASSGMN---ASETKFQKAQG-IADSNDKFYEETLKGGGG 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  89 LNNQKIVQQYVERAPqclrELLDW--GVKVKLSDerMIFTSGLD----------------ILDALLRKARSLGVTFWEDI 150
Cdd:PRK06481 138 TNDKALLRYFVDNSA----SAIDWldSMGIKLDN--LTITGGMSekrthrphdgsavggyLVDGLLKNVQERKIPLFVNA 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 151 AMLDLVLEDGAVAgGLALDVRSGEFIRFKAKAVVMASGGWH------KAFWPN------TGMRDLSGDGMAMAMRAGAKM 218
Cdd:PRK06481 212 DVTKITEKDGKVT-GVKVKINGKETKTISSKAVVVTTGGFGankdmiAKYRPDlkgyvtTNQEGSTGDGIKMIEKLGGTT 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 219 GNMEFITFCCNVFYDPPIW-----RGSlapyvmslivGGKLTNSEDEEFLN-----------------KYDPFVIQTGTf 276
Cdd:PRK06481 291 VDMDQIQIHPTVQQSKSYLigeavRGE----------GAILVNQKGKRFGNeldtrdkvsaainklpeKYAYVVFDSGV- 359
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 277 TEWNKSVLSHASMQEIRAGKAgphggifysrgdvpwenIEMVASII-FPKWKYKAIdLSAWAQKLQDGE----------- 344
Cdd:PRK06481 360 KDRVKAIAQYEEKGFVEEGKT-----------------IDELAKKInVPAETLTKT-LDTWNKAVKNKKdeafgrttgmd 421
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 506429449 345 ---------PVEVGPAVEYFEGGICVNEKLE------TTIPGLFAAGECTLGAFGSNRI-FSAITEMLVHGVDAGE 404
Cdd:PRK06481 422 ndlstgpyyAIKIAPGIHYTMGGVKINTNTEvlkkdgSPITGLYAAGEVTGGLHGENRIgGNSVADIIIFGRQAGT 497
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
28-218 4.86e-11

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 65.28  E-value: 4.86e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  28 EKGAKVTLLSKGPLA-RCGASP-MAGADFTLDGAsmskiDGLQGDPSDSmEKVFNDI--VTQGsyLNNQKIVQQYVERAP 103
Cdd:PRK08274  25 EAGASVLLLEAAPREwRGGNSRhTRNLRCMHDAP-----QDVLVGAYPE-EEFWQDLlrVTGG--RTDEALARLLIRESS 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 104 QCLRELLDWGVKVKLSDERMIFTS---------GLDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLAlDVRSGE 174
Cdd:PRK08274  97 DCRDWMRKHGVRFQPPLSGALHVArtnaffwggGKALVNALYRSAERLGVEIRYDAPVTALELDDGRFVGARA-GSAAGG 175
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 506429449 175 FIRFKAKAVVMASGG------WHKAFWPNT-------GMRDLSGDGMAMAMRAGAKM 218
Cdd:PRK08274 176 AERIRAKAVVLAAGGfesnreWLREAWGQPadnflvrGTPYNQGDLLKALLDAGADR 232
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
97-222 2.38e-08

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 56.69  E-value: 2.38e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  97 QYVERAPQCLRELLDWGVK---VKLSDERMIfTSGLDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLAldVRSG 173
Cdd:PRK12844 174 QLIKRTPRGMRTAARVGARtlaARIRGQKLL-TNGAALIGRMLEAALAAGVPLWTNTPLTELIVEDGRVVGVVV--VRDG 250
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 506429449 174 EFIRFKA-KAVVMASGGWHK--------------AFWPNTGMRDlSGDGMAMAMRAGAKMGNME 222
Cdd:PRK12844 251 REVLIRArRGVLLASGGFGHnaemrkryqpqpnsGDWTNANPGD-TGEVIEAAMRLGAALDLMD 313
sdhA PRK07573
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
152-540 6.84e-08

fumarate reductase/succinate dehydrogenase flavoprotein subunit;


Pssm-ID: 236054 [Multi-domain]  Cd Length: 640  Bit Score: 55.59  E-value: 6.84e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 152 MLDLVLEDGAVAGGLALDVRSGEFIRFKAKAVVMASGGWHKAFWpntgmrdLSGDGMA----MAMRA---GAKMGNMEFI 224
Cdd:PRK07573 193 MLDLVVVDGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFY-------LSTNAMGsnatAIWRAhkkGAYFANPCFT 265
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 225 TF---CCNVFYDppiWRGSLAPYVMSLIVGGKL---TNSED--------EE----FL-NKYDPFviqtGTFTEwnKSVLS 285
Cdd:PRK07573 266 QIhptCIPVSGD---YQSKLTLMSESLRNDGRIwvpKKKGDkrkpndipEEerdyYLeRRYPAF----GNLVP--RDVAS 336
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 286 HASMQEIRAGKA-GPHG-GIFYSRGDvpweNIE-MVASIIfpKWKY--------KAIDLSAWAQklqdgePVEVGPAVEY 354
Cdd:PRK07573 337 RAAKERCDAGRGvGPTGlGVYLDFAD----AIKrLGKDVI--RERYgnlfdmyeRITGENPYET------PMRIYPAVHY 404
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 355 FEGGICVNEKLETTIPGLFAAGECTLGAFGSNRI-FSAITEMLVHG--VdagenaaefakssaaaaasdaAYATLEE--A 429
Cdd:PRK07573 405 TMGGLWVDYNLMSTIPGLFVIGEANFSDHGANRLgASALMQGLADGyfV---------------------LPYTIGNylA 463
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 430 ASVPLTKSQGANPA------KVRRRLQ-----------EAAHAWLGPI--------RSGEEMDKLLGLTQEIKENDLPNL 484
Cdd:PRK07573 464 DTIGTPKVSTDHPEfkeaeaEVQDRIDrllnikgkrtvDSFHRELGKImwdycgmaRNEEGLKKALEKIRALREEFWKNV 543
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 506429449 485 ALTSNARAYNKEWVDALELPNLVLLLETSVRSALARTESRGVHFREDH--PE----TDNDNW 540
Cdd:PRK07573 544 RVPGSADELNQELEKAGRVADFLELGELMCRDALHREESCGGHFREEHqtEDgealRDDENF 605
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
135-216 1.41e-06

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 51.26  E-value: 1.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 135 LLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLAldVRSGEFIRFKA-KAVVMASGGW------HKAFWPNT--------- 198
Cdd:PRK06134 223 LLKSAEDLGVRIWESAPARELLREDGRVAGAVV--ETPGGLQEIRArKGVVLAAGGFphdparRAALFPRAptghehlsl 300
                         90
                 ....*....|....*...
gi 506429449 199 GMRDLSGDGMAMAMRAGA 216
Cdd:PRK06134 301 PPPGNSGDGLRLGESAGG 318
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
80-222 8.72e-06

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 48.49  E-value: 8.72e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  80 NDIVTQGSY--LNNQKIVQQYVERAPQCLRElldwGVKVKLSDERMIfTSGLDILDALLRKARSLGVTFWEDIAMLDLVL 157
Cdd:PRK07843 162 NMVVMQQDYvwLNLLKRHPRGVLRALKVGAR----TLWAKATGKNLL-GMGQALAAGLRIGLQRAGVPVLLNTPLTDLYV 236
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 158 EDGAVAGGLALDVRSGEFIRFKaKAVVMASGGwhkaFWPNTGMRDL-----------------SGDGMAMAMRAGAKMGN 220
Cdd:PRK07843 237 EDGRVTGVHAAESGEPQLIRAR-RGVILASGG----FEHNEQMRAKyqrapigtewtvgakanTGDGILAGEKLGAALDL 311

                 ..
gi 506429449 221 ME 222
Cdd:PRK07843 312 MD 313
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
132-201 3.46e-05

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 46.44  E-value: 3.46e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 132 LDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGglaLDVRSGefiRFKAKAVVMASGGWHKAFWPNTGMR 201
Cdd:COG0665  154 VRALARAARAAGVRIREGTPVTGLEREGGRVTG---VRTERG---TVRADAVVLAAGAWSARLLPMLGLR 217
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
126-220 4.70e-04

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 43.14  E-value: 4.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 126 TSGLDILDALLRKARSLGVTFWEDIAMLDLVLEDGAVAGGLALDvrSGEFIRFKAK-AVVMASGG------WHKAFWPNT 198
Cdd:PRK12842 211 TSGNALAARLAKSALDLGIPILTGTPARELLTEGGRVVGARVID--AGGERRITARrGVVLACGGfshdlaRIARAYPHL 288
                         90       100       110
                 ....*....|....*....|....*....|.
gi 506429449 199 --GMRDLS-------GDGMAMAMRAGAKMGN 220
Cdd:PRK12842 289 arGGEHLSpvpagntGDGIRLAEAVGGAVDI 319
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
103-188 1.06e-03

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 41.11  E-value: 1.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 103 PQCLRELLDWG----VKVKLSDERMIFTSG----------------LDILDA-LLRKARSLGVTFWEDIAMLDLVLEDGA 161
Cdd:COG0644   39 PRALEELEPLGldepLERPVRGARFYSPGGksvelppgrgggyvvdRARFDRwLAEQAEEAGAEVRTGTRVTDVLRDDGR 118
                         90       100
                 ....*....|....*....|....*..
gi 506429449 162 VAgglaldVRSGEFIRFKAKAVVMASG 188
Cdd:COG0644  119 VV------VRTGDGEEIRADYVVDADG 139
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
339-379 3.19e-03

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 40.12  E-value: 3.19e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 506429449 339 KLQDGEPVE-------VG--PAVEYFE-------GGICVNEKLETTIPGLFAAGECT 379
Cdd:COG1251  220 RLADGEELPadlvvvaIGvrPNTELARaaglavdRGIVVDDYLRTSDPDIYAAGDCA 276
PRK07121 PRK07121
FAD-binding protein;
7-235 3.19e-03

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 40.26  E-value: 3.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   7 ETDVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGpLARCGASPMAGADFTLDGA-SMSKIDGLQGDPsDSMEKVFNdiVTQ 85
Cdd:PRK07121  20 EADVVVVGFGAAGACAAIEAAAAGARVLVLERA-AGAGGATALSGGVIYLGGGtAVQKAAGFEDSP-ENMYAYLR--VAV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449  86 GSYLNNQKIvQQYVERAPqclrELLDW----GVKVKLS-----------DERMIFT------------------------ 126
Cdd:PRK07121  96 GPGVDEEKL-RRYCEGSV----EHFDWleglGVPFERSffpektsyppnDEGLYYSgnekawpfaeiakpaprghrvqgp 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 127 ----SGLDILDALLRKARSLGVTFWEDIAMLDLVLE-DGAVAGGLALdvRSGEFIRFKA-KAVVMASGG------WHKAF 194
Cdd:PRK07121 171 gdsgGGAMLMDPLAKRAAALGVQIRYDTRATRLIVDdDGRVVGVEAR--RYGETVAIRArKGVVLAAGGfamnreMVARY 248
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 506429449 195 WPN-TGMRDLS-----GDGMAMAMRAGAKMGNME--FITFccnvFYDPP 235
Cdd:PRK07121 249 APAyAGGLPLGttgddGSGIRLGQSAGGATAHMDqvFAWR----FIYPP 293
PRK12837 PRK12837
FAD-binding protein;
125-219 4.17e-03

FAD-binding protein;


Pssm-ID: 237222 [Multi-domain]  Cd Length: 513  Bit Score: 39.81  E-value: 4.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449 125 FTSGLDILDALLRKARSL-GVTFWEDIAMLDLVLEDGAVAGglALDVRSGEFIRFKA-KAVVMASGGwhkaFWPNTGMRD 202
Cdd:PRK12837 169 LVGGRALIGRFLAALARFpNARLRLNTPLVELVVEDGRVVG--AVVERGGERRRVRArRGVLLAAGG----FEQNDDMRA 242
                         90       100
                 ....*....|....*....|....*....
gi 506429449 203 LSG------DGM------AMAMRAGAKMG 219
Cdd:PRK12837 243 RYGvpgsarDTMggpgntGLAHQAAIAVG 271
PRK06370 PRK06370
FAD-containing oxidoreductase;
352-383 5.67e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 39.42  E-value: 5.67e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 506429449 352 VEYFE-GGICVNEKLETTIPGLFAAGECTL-GAF 383
Cdd:PRK06370 283 VETDArGYIKVDDQLRTTNPGIYAAGDCNGrGAF 316
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
356-394 8.70e-03

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 38.56  E-value: 8.70e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 506429449 356 EGGICVNEKLETTIPGLFAAGECTLGAFgsNRIFSAITE 394
Cdd:COG0492  253 DGYIVVDEDMETSVPGVFAAGDVRDYKY--RQAATAAGE 289
HI0933_like pfam03486
HI0933-like protein;
8-215 8.75e-03

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 38.72  E-value: 8.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449    8 TDVLVIGGGGAGFRAAIGAAEKGAKVTLLSKGplarcgasPMAGADFTLDGASMSKIDGLQGDPSDSMekvfndivtqGS 87
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKG--------KKLGRKILISGGGRCNVTNLSEEPDNFL----------SR 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506429449   88 YLNNQKIVQQYVER-APQCLRELL-DWGVKVK-LSDERMiFT---SGLDILDALLRKARSLGVTFWEDIAMLDLVLEDGa 161
Cdd:pfam03486  63 YPGNPKFLKSALSRfTPWDFIAFFeSLGVPLKeEDHGRL-FPdsdKASDIVDALLNELKELGVKIRLRTRVLSVEKDDD- 140
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 506429449  162 vaGGLALDVRSGEfirFKAKAVVMASGGwhkAFWPNTGMrdlSGDGMAMAMRAG 215
Cdd:pfam03486 141 --GRFRVKTGGEE---LEADSLVLATGG---LSWPKTGS---TGFGYPLAEQFG 183
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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