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Conserved domains on  [gi|6754936|ref|NP_035140|]
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olfactory marker protein [Mus musculus]

Protein Classification

Olfactory_mark domain-containing protein( domain architecture ID 10534934)

Olfactory_mark domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Olfactory_mark pfam06554
Olfactory marker protein; This family consists of several olfactory marker proteins. ...
12-161 2.08e-95

Olfactory marker protein; This family consists of several olfactory marker proteins. Expression of the olfactory marker protein (OMP) is highly restricted to mature olfactory receptor neurons in virtually all vertebrate species from fish to man.


:

Pssm-ID: 399511  Cd Length: 149  Bit Score: 272.40  E-value: 2.08e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     12 EMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQqKLQFDHWNVVLDKPGKVTITGTSQNWTPDL 91
Cdd:pfam06554   1 ELTFRQDVQLTEVMRLRVQSLQQRGQKRQDGEKLLRPNESVYRLDFSQQ-KLRFLRWNVCLDKPGKLTITGTSQLWTPDL 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     92 TNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFN 161
Cdd:pfam06554  80 TNLMTRQLLEPVGIFWRKAGDDAIQCYEADAQEFGERIAELAKIRKVMYFLIAFGDGLEPANVKCSIVFN 149
 
Name Accession Description Interval E-value
Olfactory_mark pfam06554
Olfactory marker protein; This family consists of several olfactory marker proteins. ...
12-161 2.08e-95

Olfactory marker protein; This family consists of several olfactory marker proteins. Expression of the olfactory marker protein (OMP) is highly restricted to mature olfactory receptor neurons in virtually all vertebrate species from fish to man.


Pssm-ID: 399511  Cd Length: 149  Bit Score: 272.40  E-value: 2.08e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     12 EMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQqKLQFDHWNVVLDKPGKVTITGTSQNWTPDL 91
Cdd:pfam06554   1 ELTFRQDVQLTEVMRLRVQSLQQRGQKRQDGEKLLRPNESVYRLDFSQQ-KLRFLRWNVCLDKPGKLTITGTSQLWTPDL 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     92 TNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFN 161
Cdd:pfam06554  80 TNLMTRQLLEPVGIFWRKAGDDAIQCYEADAQEFGERIAELAKIRKVMYFLIAFGDGLEPANVKCSIVFN 149
 
Name Accession Description Interval E-value
Olfactory_mark pfam06554
Olfactory marker protein; This family consists of several olfactory marker proteins. ...
12-161 2.08e-95

Olfactory marker protein; This family consists of several olfactory marker proteins. Expression of the olfactory marker protein (OMP) is highly restricted to mature olfactory receptor neurons in virtually all vertebrate species from fish to man.


Pssm-ID: 399511  Cd Length: 149  Bit Score: 272.40  E-value: 2.08e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     12 EMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQqKLQFDHWNVVLDKPGKVTITGTSQNWTPDL 91
Cdd:pfam06554   1 ELTFRQDVQLTEVMRLRVQSLQQRGQKRQDGEKLLRPNESVYRLDFSQQ-KLRFLRWNVCLDKPGKLTITGTSQLWTPDL 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6754936     92 TNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFN 161
Cdd:pfam06554  80 TNLMTRQLLEPVGIFWRKAGDDAIQCYEADAQEFGERIAELAKIRKVMYFLIAFGDGLEPANVKCSIVFN 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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