pituitary homeobox 3 [Mus musculus]
homeobox domain-containing protein( domain architecture ID 11079034)
homeobox domain-containing protein may be involved in the transcriptional regulation of key eukaryotic developmental processes; also contains an OAR domain
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
63-119 | 5.28e-31 | |||
Homeodomain; : Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 110.28 E-value: 5.28e-31
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
258-275 | 8.14e-06 | |||
OAR motif; The entry represents the OAR motif. : Pssm-ID: 461067 Cd Length: 19 Bit Score: 41.63 E-value: 8.14e-06
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PTZ00395 super family | cl33180 | Sec24-related protein; Provisional |
142-236 | 3.98e-05 | |||
Sec24-related protein; Provisional The actual alignment was detected with superfamily member PTZ00395: Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 45.07 E-value: 3.98e-05
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
63-119 | 5.28e-31 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 110.28 E-value: 5.28e-31
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
63-121 | 1.50e-26 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 98.85 E-value: 1.50e-26
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
62-118 | 3.34e-26 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 98.09 E-value: 3.34e-26
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
42-130 | 1.69e-12 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 63.99 E-value: 1.69e-12
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
258-275 | 8.14e-06 | |||
OAR motif; The entry represents the OAR motif. Pssm-ID: 461067 Cd Length: 19 Bit Score: 41.63 E-value: 8.14e-06
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PTZ00395 | PTZ00395 | Sec24-related protein; Provisional |
142-236 | 3.98e-05 | |||
Sec24-related protein; Provisional Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 45.07 E-value: 3.98e-05
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Name | Accession | Description | Interval | E-value | |||
Homeodomain | pfam00046 | Homeodomain; |
63-119 | 5.28e-31 | |||
Homeodomain; Pssm-ID: 459649 [Multi-domain] Cd Length: 57 Bit Score: 110.28 E-value: 5.28e-31
|
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homeodomain | cd00086 | Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ... |
63-121 | 1.50e-26 | |||
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner. Pssm-ID: 238039 [Multi-domain] Cd Length: 59 Bit Score: 98.85 E-value: 1.50e-26
|
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HOX | smart00389 | Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ... |
62-118 | 3.34e-26 | |||
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes Pssm-ID: 197696 [Multi-domain] Cd Length: 57 Bit Score: 98.09 E-value: 3.34e-26
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COG5576 | COG5576 | Homeodomain-containing transcription factor [Transcription]; |
42-130 | 1.69e-12 | |||
Homeodomain-containing transcription factor [Transcription]; Pssm-ID: 227863 [Multi-domain] Cd Length: 156 Bit Score: 63.99 E-value: 1.69e-12
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OAR | pfam03826 | OAR motif; The entry represents the OAR motif. |
258-275 | 8.14e-06 | |||
OAR motif; The entry represents the OAR motif. Pssm-ID: 461067 Cd Length: 19 Bit Score: 41.63 E-value: 8.14e-06
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PTZ00395 | PTZ00395 | Sec24-related protein; Provisional |
142-236 | 3.98e-05 | |||
Sec24-related protein; Provisional Pssm-ID: 185594 [Multi-domain] Cd Length: 1560 Bit Score: 45.07 E-value: 3.98e-05
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Blast search parameters | ||||
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