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Conserved domains on  [gi|4885341|ref|NP_005275|]
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G-protein coupled receptor 6 isoform b [Homo sapiens]

Protein Classification

7tmA_GPR6 domain-containing protein( domain architecture ID 11610467)

7tmA_GPR6 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
73-340 3.52e-169

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


:

Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 472.11  E-value: 3.52e-169
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15962   1 NPWDIMLCISGTVIACENAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISLITVGFLVASF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15962  81 TASVSSLLAITVDRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGLLPVLGWNCLEERASCSIVRPLTKSNVTLLSA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15962 161 SFFFIFILMLHLYIKICKIVCRHAHQIALQQHFLTASHYVATKKGVSTLAIILGTFGASWLPFAIYCVVGDHEYPAVYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15962 241 ATLLPATYNSMINPIIYAYRNQEIQRSM 268
 
Name Accession Description Interval E-value
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
73-340 3.52e-169

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 472.11  E-value: 3.52e-169
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15962   1 NPWDIMLCISGTVIACENAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISLITVGFLVASF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15962  81 TASVSSLLAITVDRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGLLPVLGWNCLEERASCSIVRPLTKSNVTLLSA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15962 161 SFFFIFILMLHLYIKICKIVCRHAHQIALQQHFLTASHYVATKKGVSTLAIILGTFGASWLPFAIYCVVGDHEYPAVYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15962 241 ATLLPATYNSMINPIIYAYRNQEIQRSM 268
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
89-329 2.32e-24

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 100.06  E-value: 2.32e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341     89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSETVSL------LTVGFLVASFAASVSSLLAI 162
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSL-LTLPFWLVYYLNHGDWPFgsalckIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341    163 TVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL-LPVLGWNCLAE---RAACSVVRPLARS-----HVALLSAA 233
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLpPLLFGWTLTVPegnVTVCFIDFPEDLSkpvsyTLLISVLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341    234 FFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED------- 306
Cdd:pfam00001 160 FLLPLLVILVCYTLIIRTLRKSASKQKSSERTQRR------RKALKTLAVVVVVFILCWLPYHIVNLLDSLALdcelsrl 233
                         250       260
                  ....*....|....*....|....
gi 4885341    307 -PAVYTYATLLpATYNSMINPIIY 329
Cdd:pfam00001 234 lDKALSVTLWL-AYVNSCLNPIIY 256
 
Name Accession Description Interval E-value
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
73-340 3.52e-169

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 472.11  E-value: 3.52e-169
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15962   1 NPWDIMLCISGTVIACENAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISLITVGFLVASF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15962  81 TASVSSLLAITVDRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGLLPVLGWNCLEERASCSIVRPLTKSNVTLLSA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15962 161 SFFFIFILMLHLYIKICKIVCRHAHQIALQQHFLTASHYVATKKGVSTLAIILGTFGASWLPFAIYCVVGDHEYPAVYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15962 241 ATLLPATYNSMINPIIYAYRNQEIQRSM 268
7tmA_GPR3_GPR6_GPR12-like cd15100
G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of ...
73-340 2.65e-148

G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3. Also included in this subfamily is GPRx, also known as GPR185, which involved in the maintenance of meiotic arrest in frog oocytes.


Pssm-ID: 320228 [Multi-domain]  Cd Length: 268  Bit Score: 419.19  E-value: 2.65e-148
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15100   1 NPWDIVLCVSGTLIACENAIVVAIIFSTPSLRAPMFLLIGSLALADLLAGLGLILHFVFRYCVYSEALSLVSVGLLVAAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15100  81 SASVCSLLAITVDRYLSLYNALTYYSERTLTFTYVMLALLWTLALGLGLLPVLGWNCLREGSSCSVVRPLTKNHLAVLAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15100 161 AFLLVFALMLQLYAQICRIVLRHAHQIALQRHFLAPSHYVATRKGVSTLALILGTFAACWIPFAVYCLLGDGSSPALYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15100 241 ATLLPATYNSMINPIIYAFRNQDIQKVL 268
7tmA_GPR3 cd15963
G protein-coupled receptor 3, member of the class A family of seven-transmembrane G ...
73-340 2.95e-120

G protein-coupled receptor 3, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320629 [Multi-domain]  Cd Length: 268  Bit Score: 348.03  E-value: 2.95e-120
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15963   1 NPWDVVLCISGTVISCENAIVVAVIFYTPAFRAPMFLLIGSLATADLLAGLGLILHFAFVYCIQSAPVNLVTVGLLAPSF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15963  81 TASVSSLLAITIDRYLSLYNALTYYSERTVTRTYIMLILTWGASLCLGLLPVVGWNCLKDPSTCSVVKPLTKNHLVILSI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15963 161 SFFMVFALMLQLYAQICRIVCRHAHQIALQRHFLPTSHYVTTRKGIATLAVILGTFASCWLPFAVYCLLGDYTYPALYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15963 241 ATLLPATYNSMINPIIYAFRNQEIQKVL 268
7tmA_GPR12 cd15961
G protein-coupled receptor 12, member of the class A family of seven-transmembrane G ...
73-340 6.61e-113

G protein-coupled receptor 12, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320627 [Multi-domain]  Cd Length: 268  Bit Score: 329.68  E-value: 6.61e-113
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15961   1 NPWDIVLCTSGTLISCENAIVVLIIFQNPSLRAPMFLLIGSLALADLLAGIGLILNFIFAYLLQSEAAKLVTVGLIVASF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15961  81 SASVCSLLAITVDRYLSLYYALTYNSERTVTFTYVMLVLLWGASICLGLLPVMGWNCLADESTCSVVRPLTKNNAAILSV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15961 161 SFLLMFALMLQLYIQICKIVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSIYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15961 241 ATLLPATYNSIINPVIYAFRNQEIQKAL 268
7tmA_GPR185-like cd15960
G protein-coupled receptor 185 and similar proteins, member of the class A family of ...
73-340 6.88e-98

G protein-coupled receptor 185 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR185, also called GPRx, is a member of the constitutively active GPR3/6/12 subfamily of G protein-coupled receptors. It plays a role in the maintenance of meiotic arrest in Xenopus laevis oocytes through G(s) protein, which leads to increased cAMP levels. In Xenopus laevis, GPR185 is primarily expressed in brain, ovary, and testis; however, its ortholog has not been identified in other vertebrate genomes. GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest.


Pssm-ID: 320626 [Multi-domain]  Cd Length: 268  Bit Score: 291.42  E-value: 6.88e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd15960   1 SPWDIALCVTGTVMACENAIVIAILFYTPSLRAPMFILIGSLALADLLAGLGLIANFVAIYVMNSEAVTLCSAGLLLAAF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15960  81 SASVCSLLAITVDRYLSLYNALTYHTERTLTFTYGLLALLWLTCIGIGLLPAMGWNCLRAPASCSVLRPVTKNNAAVLAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15960 161 SFLLLFALMMQLYLQICRIAFRHAQQIAVQHQFVNFCLASSTRKGVSTLSLILATFAFCWVPFAVYSMVADSSYPMIYTY 240
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15960 241 YLVLPAACNSVINPIIYAFRNPDIQKSL 268
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
75-340 4.15e-86

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 261.46  E-value: 4.15e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLV---PSETVSLLTVGFLVAS 151
Cdd:cd14972   1 VLVVAIVLGVFIVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVsltPSPATWLLRKGSLVLS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNC-LAERAACSVV-RPLARSHVAL 229
Cdd:cd14972  81 LLASAYSLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLALLPVLGWNCvLCDQESCSPLgPGLPKSYLVL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSH----E 305
Cdd:cd14972 161 ILVFFFIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQPSTSRKLAKTVVIVLGVFLVCWLPLLILLVLDVLcpsvC 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 4885341  306 DPAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14972 241 DIQAVFYYFLVLALLNSAINPIIYAFRLKEMRRAV 275
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
77-333 4.08e-33

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 124.32  E-value: 4.08e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGL----ILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd00637   3 VLYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVipfsLVSLLLGRWWFGDALCKLLGFLQSVSL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN-----CLAERAACSVVRPLARSHV 227
Cdd:cd00637  83 LASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGvydygGYCCCCLCWPDLTLSKAYT 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  228 ALLSAAFFMV-FGIMLHLYVRICQVVWRHAHQIALQQHCLAPP-HLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHE 305
Cdd:cd00637 163 IFLFVLLFLLpLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRrRRRRERKVTKTLLIVVVVFLLCWLPYFILLLLDVFG 242
                       250       260       270
                ....*....|....*....|....*....|...
gi 4885341  306 DPAVYTYATLLPATY-----NSMINPIIYAFRN 333
Cdd:cd00637 243 PDPSPLPRILYFLALllaylNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
77-340 2.41e-30

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 116.51  E-value: 2.41e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGC----GLILHFVFQYLVPSETVSLLTVGFLVASF 152
Cdd:cd14967   5 FLSLIILVTVFG-NLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALlvmpFSAVYTLLGYWPFGPVLCRFWIALDVLCC 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN--CLAERAACSVVRPLARSHVALL 230
Cdd:cd14967  84 TASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRdeTQPSVVDCECEFTPNKIYVLVS 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 S-AAFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSH----- 304
Cdd:cd14967 164 SvISFFIPLLIMIVLYARIFRVARRE-------------------LKAAKTLAIIVGAFLLCWLPFFIIYLVSAFcppdc 224
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 4885341  305 EDPAVYTYATLLPATyNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14967 225 VPPILYAVFFWLGYL-NSALNPIIYALFNRDFRRAF 259
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
77-340 7.82e-26

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 104.76  E-value: 7.82e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALR-TPMFVLVGSLATADLLAGCGLILHFVFQYLVPSE-TVSLLTVG---FLVAS 151
Cdd:cd15104   4 VILAVLSPLIITGNLLVIVALLKLIRKKdTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGEnTQKVLCLLrmcFVITS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL--PVLGWNCLAERAACS---VVRPlaRSH 226
Cdd:cd15104  84 CAASVLSLAAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIGFLplISPQFQQTSYKGKCSffaAFHP--RVL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 VALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPP-HLAATR---KGVGTLAVVLGTFGASWLPFAIYCVV- 301
Cdd:cd15104 162 LVLSCMVFFPALLLFVFCYCDILKIARVHSRAIYKVEHALARQiHPRRTLsdfKAARTVAVLIGCFLLSWLPFQITGLVq 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 4885341  302 ----GSHEDPAVYTYaTLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15104 242 alcdECKLYDVLEDY-LWLLGLCNSLLNPWIYAFWQKEVRRAL 283
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
89-329 2.32e-24

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 100.06  E-value: 2.32e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341     89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSETVSL------LTVGFLVASFAASVSSLLAI 162
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSL-LTLPFWLVYYLNHGDWPFgsalckIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341    163 TVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL-LPVLGWNCLAE---RAACSVVRPLARS-----HVALLSAA 233
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLpPLLFGWTLTVPegnVTVCFIDFPEDLSkpvsyTLLISVLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341    234 FFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED------- 306
Cdd:pfam00001 160 FLLPLLVILVCYTLIIRTLRKSASKQKSSERTQRR------RKALKTLAVVVVVFILCWLPYHIVNLLDSLALdcelsrl 233
                         250       260
                  ....*....|....*....|....
gi 4885341    307 -PAVYTYATLLpATYNSMINPIIY 329
Cdd:pfam00001 234 lDKALSVTLWL-AYVNSCLNPIIY 256
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
90-340 1.03e-23

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 98.87  E-value: 1.03e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETV--SLLTVGFLVASFAASVSSLLAITVDRY 167
Cdd:cd14968  18 NVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAILISLGLPTNFhgCLFMACLVLVLTQSSIFSLLAIAIDRY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  168 LSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA---CSVVRPLARSHVALLSAAFFMVFG----- 239
Cdd:cd14968  98 LAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGLTPMFGWNNGAPLESgcgEGGIQCLFEEVIPMDYMVYFNFFAcvlvp 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  240 --IMLHLYVRICQVVWRHAHQIALQQHCLAPPH-LAATRKGVGTLAVVLGTFGASWLPFAIY-CVV---GSHEDPAVYTY 312
Cdd:cd14968 178 llIMLVIYLRIFRVIRKQLRQIESLLRSRRSRStLQKEVKAAKSLAIILFLFALCWLPLHIInCITlfcPECKVPKILTY 257
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14968 258 IAILLSHANSAVNPIVYAYRIRKFRQTF 285
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
77-340 1.05e-22

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 96.06  E-value: 1.05e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALR-TPMFVLVGSLATADLLAGCGLILHFVFQYL---VPSETVSLLTVGFLVASF 152
Cdd:cd15099   5 VLCFLAGPVTFLENILVLLTILSSTALRrRPSYLFIGSLALADMLASVIFTISFLDFHVfhqRDSRNLFLFKLGGVTMAF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd15099  85 TASVGSLLLTALDRYLCIYQPSNYKLLVTRTRAKVAILLMWCVTIIISFLPLMGWRCKTWDSPCSRLFPYIDRHYLASWT 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVfgIMLHLYVRICQVVWR-HAHQIALQQHCLAP---PHLAATRKGV---GTLAVVLGTFGASWLP---FAIYCVVG 302
Cdd:cd15099 165 GLQLV--LLFLIIYAYPYILWKaHRHEANMGGPKLGRqqvKGQARMRMDIrlaKTLSLILLVLAICWLPvlaFMLVDVRV 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 4885341  303 SHED--PAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15099 243 TLTNkqKRMFAFCSML-CLVNSCVNPIIYALRSRELRGAM 281
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
77-340 1.50e-22

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 95.68  E-value: 1.50e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALR-TPMFVLVGSLATADLLAG----CGLILHFVFqYLVPSETVSLLTVGFLVAS 151
Cdd:cd15341   5 VLCTLCGLLCILENVAVLYLILSSPKLRrKPSYLFIGSLALADFLASvvfaCSFVDFHVF-HGVDSSAIFLLKLGGVTMS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVaLLS 231
Cdd:cd15341  84 FTASLGSLLLMAFDRYVCIYYPSEYKALVTRKRALVALAVMWVLTALIAYLPLMGWNCCPLNSPCSELFPLIPNDY-LLS 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRIcQVVWR-HAHQIALQQHCL-APPHLAATRKGV---GTLAVVLGTFGASWLPFAI---YCVVGS 303
Cdd:cd15341 163 WLLLVAILLSGIIYTYG-HVLWKaHKHVVYMEKHQDqQGPGNARMRLDVrlaKTLGLVLAVLLICWSPVLAlmmHSLFTS 241
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 4885341  304 HED--PAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15341 242 LSDhiKKAFAFCSTL-CLVNSMVNPIIYALRSRELRSSL 279
7tmA_LPAR2_Edg4 cd15342
lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial ...
90-338 2.28e-22

lysophosphatidic acid receptor subtype 2 (LPAR2 or LPA2), also called Endothelial differentiation gene 4 (Edg4), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320464 [Multi-domain]  Cd Length: 274  Bit Score: 95.25  E-value: 2.28e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLiLHFVFQYLVPSETVSL----LTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15342  18 NLLVIAAIFINRRFHYPIYYLLGNLAAADLFAGVAY-LFLMFHTGPWTAKLSLyqwfLRQGLLDTSLTASVANLLAIAVE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNaLTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSAAFFMVFGIMLHL 244
Cdd:cd15342  97 RHQTIFT-MQLHSKMSNQRVVILIFGIWMVALILGLIPAMGWNCLCDLKRCSTMAPLySRSYLVFWALSNLLTFLIMVAV 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  245 YVRICQVVWRHAHQIAlQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGS--HEDPAVYTYAT--LLPATY 320
Cdd:cd15342 176 YTRIFIYVRRKSQRMS-EHHSSHPRYRETVLGLMKTVVIILGAFVVCWTPGQVVLLLDGlgCESCNVLAYEKyfLLLAEI 254
                       250
                ....*....|....*...
gi 4885341  321 NSMINPIIYAFRNQEIQR 338
Cdd:cd15342 255 NSLVNPIVYSYRDKEMRK 272
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
75-339 9.86e-22

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 92.81  E-value: 9.86e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPS----ETVSLLTVGFLVA 150
Cdd:cd15061   2 LISFLILAIIFTIFGNLLVILAVATTRRLRTITNCYIVSLATADLLVGVLVLPLAIIRQLLGYwplgSHLCDFWISLDVL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALL 230
Cdd:cd15061  82 LCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVWVISLLITSPPLVGPSWHGRRGLGSCYYTYDKGYRIYS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 S-AAFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED--- 306
Cdd:cd15061 162 SmGSFFLPLLLMLFVYLRIFRVIAKE-------------------RKTAKTLAIVVGCFIVCWLPFFIMYLIEPFCDcqf 222
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  307 -PAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15061 223 sEALSTAFTWL-GYFNSVINPFIYAFYNKDFRRA 255
7tmA_S1PR2_Edg5 cd15347
sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial ...
74-338 1.71e-21

sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial differentiation gene 5 (Edg5), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320469 [Multi-domain]  Cd Length: 266  Bit Score: 92.57  E-value: 1.71e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   74 PWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFvfqYLVPSETVSLLTVGFLV---- 149
Cdd:cd15347   2 VASIFIVILCCIIVLENLLVLIAVARNKKFHSAMFFFIGNLAFSDLLAGVAFIANI---LLSGSVTFRLTPVQWFIregt 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 --ASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVhLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSH 226
Cdd:cd15347  79 afITLSASVFSLLAIAIERHVAITKVKLYGSDKNCRMV-LLIGACWVISIVLGGLPILGWNCIGNLEDCSTVLPLySKHY 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 VALLSAAFFMVFGIMLHLYVRICQVVwRHAHQIAlqqhcLAPPHLAATRkgvgTLAVVLGTFGASWLP-FAIYCVVGS-- 303
Cdd:cd15347 158 ILFVVTIFSIILLSIVILYVRIYCIV-RSSHAEM-----AAPQTLALLK----TVTIVLGVFIVCWLPaFIILLLDTSck 227
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  304 -HEDPAVYTYATLLP-ATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15347 228 vKSCPILYKADYFFSvATLNSALNPVIYTLRSKDMRK 264
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
89-340 2.25e-21

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 92.15  E-value: 2.25e-21
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQ---YLVPSETVSLLTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15102  17 ENLLVLIAIWRHMKFHRPMYYFLGNLALSDLLAGAAYLANILLSgarTLRLSPAQWFLREGSMFVALSASVFSLLAIAIE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLgVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSAAFFMVFGIMLHL 244
Cdd:cd15102  97 RHLTMAKMKPYGASKTSR-VLLLIGACWLISLLLGGLPILGWNCLGALDACSTVLPLySKHYVLFCVTIFAGILAAIVAL 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  245 YVRICQVVwrHAHQIALQQHCLAPPHLAATRkgvgTLAVVLGTFGASWLPFAIYCVVG----SHEDPAVYTYATLLP-AT 319
Cdd:cd15102 176 YARIYCLV--RASGRKATRASASPRSLALLK----TVLIVLLVFIACWGPLFILLLLDvacpVKTCPILYKADWFLAlAV 249
                       250       260
                ....*....|....*....|.
gi 4885341  320 YNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15102 250 LNSALNPIIYTLRSRELRRAV 270
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
89-340 2.36e-20

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 89.47  E-value: 2.36e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL----------LTVGFLVASFAASVSS 158
Cdd:cd15103  17 ENILVILAIAKNKNLHSPMYFFICSLAVADMLVSVSNALETIVIILLNNGYLVPrdsfeqhidnVIDSMICSSLLASICS 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLglgllpvlgwnclaeraACSVVRPLARSHVAL---LSAAFF 235
Cdd:cd15103  97 LLAIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCT-----------------VCGILFIIYSDSVPViicLISMFF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFGIMLHLYVRICQVVWRHAHQIAlQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV--VGSHEDPAVYTYA 313
Cdd:cd15103 160 AMLVLMASLYVHMFLLARSHVKKIA-ALPGQRSTRQRANMKGAVTLTILLGVFIFCWAPFFLHLTlmISCPSNPYCACYM 238
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  314 T-----LLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15103 239 ShfnvyLILIMCNSVIDPLIYAFRSQELRKTF 270
7tmA_LPAR cd15101
lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane ...
77-338 2.83e-20

lysophosphatidic acid receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341325 [Multi-domain]  Cd Length: 274  Bit Score: 89.11  E-value: 2.83e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTV---IAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCG-LILHFVFQYLVPSETVS--LLTVGFLVA 150
Cdd:cd15101   2 LVMGLGITVcifIMLANLLVIAAIYKNRRFHFPIYYLLANLAAADFFAGLAyFFLMFNTGPNTRRLTVStwFLRQGLLDT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYLSLYnALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVAL 229
Cdd:cd15101  82 SLTASVANLLAIAVERHISVM-RMQLHSRLSNRRVVVLIVLVWTMAIVMGAIPSVGWNCLCAIDACSNMAPLySRSYLVF 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHClAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV--VGSHEDP 307
Cdd:cd15101 161 WAISNLVTFLVMVVVYARIFVYVRRRTNRMSPHTSG-SIRNRDTMMSLLKTVVIVLGAFVVCWTPGLVVLLldGLCCRQC 239
                       250       260       270
                ....*....|....*....|....*....|...
gi 4885341  308 AVYTYAT--LLPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15101 240 NVLAVEKffLLLAEFNSAVNPIIYSYRDKEMSG 272
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
90-339 5.04e-20

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 88.15  E-value: 5.04e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYlvpsETVSLLTVGFLVASF---------AASVSSLL 160
Cdd:cd15064  18 NALVIAAILLTRKLHTPANYLIASLAVADLLVAV-LVMPLSAVY----ELTGRWILGQVLCDIwisldvtccTASILHLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGW--NCLAERAACSVVRPLARSHVALLsAAFFMVF 238
Cdd:cd15064  93 VIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFGWrtPDSEDPSECLISQDIGYTIFSTF-GAFYIPL 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVV-----GSHEDPAVYTYA 313
Cdd:cd15064 172 LLMLILYWKIYRAAARE-------------------RKAAKTLGIILGAFIVCWLPFFLVALIvplcsHCWIPLALKSFF 232
                       250       260
                ....*....|....*....|....*.
gi 4885341  314 TLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15064 233 LWL-GYFNSLINPLIYTFFNKDFRKA 257
7tmA_S1PR5_Edg8 cd15348
sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial ...
86-340 1.55e-19

sphingosine-1-phosphate receptor subtype 5 (S1PR5 or S1P5), also called endothelial differentiation gene 8 (Edg8), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320470 [Multi-domain]  Cd Length: 277  Bit Score: 87.19  E-value: 1.55e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   86 IAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQ---YLVPSETVSLLTVGFLVASFAASVSSLLAI 162
Cdd:cd15348  14 IVLENLIVLLALWRNKKFHSPMFYLLGSLTLSDLLAGAAYAANILMSganTLKLTPALWFLREGGVFITLTASVFSLLAI 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNaLTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSAAFFMVFGIM 241
Cdd:cd15348  94 AIERHITMVR-MKPYPGDKRGRMFLLIGAAWLVSILLGVLPILGWNCLGNLDACSTVLPLyAKSYILFCITVFLAILAAI 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRICQVVWRHAHQIALQQHC-----LAPPHLAATRkgvgTLAVVLGTFGASWLP------FAIYCVVGSHedPAVY 310
Cdd:cd15348 173 VVLYARIYRIVKANSQRLGALPTRkgrarRSQKYLALLK----TVTIVLGTFVACWLPlfllllLDVSCPAQAC--PVLL 246
                       250       260       270
                ....*....|....*....|....*....|.
gi 4885341  311 TYATLLP-ATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15348 247 KADYFLGlAMINSLLNPIIYTLTSRDMRRAI 277
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
89-340 1.90e-19

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 86.77  E-value: 1.90e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVpSETVSLLTVGFL-----------VASFAASVS 157
Cdd:cd15351  17 ENILVVVAIAKNRNLHSPMYYFICCLAVSDMLVSVSNLIETLFMLLL-EHGVLVCRAPMLqhmdnvidtmiCSSVVSSLS 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  158 SLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWtvslglgllpvlgwncLAERAACSVVRPLARSHVALLSAAFFMV 237
Cdd:cd15351  96 FLGAIAVDRYITIFYALRYHSIMTLQRAVNAIAGIW----------------LASTVSSTLFIVYYNSNAVILCLIVFFL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  238 FGI--MLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIY--CVVGSHEDPAVYTYA 313
Cdd:cd15351 160 FMLvlMLVLYIHMFILACRHSQSISSQQRRQCPHQQTASLKGAITLTILLGIFFLCWGPFFLHltLIVTCPTHPFCLCYF 239
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  314 T-----LLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15351 240 KyfnlfLILIICNSIIDPLIYAFRSQELRKTL 271
7tmA_S1PR1_Edg1 cd15346
sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial ...
89-340 4.41e-19

sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320468 [Multi-domain]  Cd Length: 277  Bit Score: 86.08  E-value: 4.41e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   89 ENALVVALIASTPALRTPMFVLVGSLATADLLAG----CGLILHFVFQY-LVPSETvsLLTVGFLVASFAASVSSLLAIT 163
Cdd:cd15346  17 ENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGvaytANLLLSGATTYkLTPTQW--FLREGSMFVALSASVFSLLAIA 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  164 VDRYLSLYNALTYYSRRTLLgVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVFGI-ML 242
Cdd:cd15346  95 IERYITMLKMKLHNGSNSFR-SFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLsIV 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKG-VGTLAVVLGTFGASWLPFAIYCV--VGSHEDPAVYTYAT---LL 316
Cdd:cd15346 174 ILYCRIYSLVRTRSRRLTFRKNIRKASRSSEKSMAlLKTVIIVLSVFIACWAPLFILLLldVGCKVKTCSILFKAeyfLV 253
                       250       260
                ....*....|....*....|....
gi 4885341  317 PATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15346 254 LAVLNSATNPIIYTLTNKEMRRAF 277
7tmA_LPAR3_Edg7 cd15343
lysophosphatidic acid receptor subtype 3 (LPAR3 or LPA3), also called endothelial ...
90-340 5.22e-19

lysophosphatidic acid receptor subtype 3 (LPAR3 or LPA3), also called endothelial differentiation gene 7 (Edg7), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320465 [Multi-domain]  Cd Length: 274  Bit Score: 85.70  E-value: 5.22e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILhFVFQYLVPSETVSL----LTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15343  18 NSLVIAAVVKNKRFHYPFYYLLANLAAADFFAGIAYVF-LMFNTGPVSKTLTVnrwfLRQGLLDTSLSASLTNLLVIAVE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNaLTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSAAFFMVFGIMLHL 244
Cdd:cd15343  97 RHISIMR-MKVHSNLTKRRVTLLIALVWAIAIFMGAVPTLGWNCICNISACSSLAPIySRSYLVFWSVSNLVVFLIMVVV 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  245 YVRICQVVWRHAHqiALQQHCLAPPHLAATR-KGVGTLAVVLGTFGASWLPFAIYCVVG--SHEDPAVYTYAT--LLPAT 319
Cdd:cd15343 176 YLRIYVYVQRKTN--VLSPHTSGSINRRRTPiKLMKTVMTVLGAFVICWTPGLVVLLLDglNCTRCGVQHVKRwfLLLAL 253
                       250       260
                ....*....|....*....|.
gi 4885341  320 YNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15343 254 LNSVMNPIIYSYKDEEMWGTM 274
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
75-340 9.37e-19

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 85.08  E-value: 9.37e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSE-----TVSLLTVGFLV 149
Cdd:cd15051   4 GVVLAVIILLTVIG-NVLVCLAVAVNRRLRNLTNYFIVSLAVTDLLLGL-LVLPFSAIYELRGEwplgpVFCNIYISLDV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 ASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLG-WNCLAERA-------ACSVvrP 221
Cdd:cd15051  82 MLCTASILNLFAISLDRYLAITAPLRYPSRVTPRRVAIALAAIWVVSLAVSFLPIHLgWNTPDGRVqngdtpnQCRF--E 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARSHVALLS-AAFFMVFGIMLHLYVRICQVVWRHAHQI--ALQQHCLAPPHLAAT---RKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15051 160 LNPPYVLLVAiGTFYLPLLIMCGVYLRIFRIAREQAKRInaLTPASTANSSKSAATareHKATVTLAAVLGAFIICWFPY 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 4885341  296 AIY----CVVGSHEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15051 240 FTYftyrGLCGDNINETALSVVLWL-GYANSALNPILYAFLNRDFRRAF 287
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
77-340 3.10e-18

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 83.76  E-value: 3.10e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGC-----------------GLILHFVFQYLVpset 139
Cdd:cd15055   6 VLSSISLLTVLG-NLLVIISISHFKQLHTPTNLLLLSLAVADFLVGLlvmpfsmirsietcwyfGDTFCKLHSSLD---- 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  140 vSLLTvgflvasfAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSL---GLGLLPVLGWNCLAERAAC 216
Cdd:cd15055  81 -YILT--------SASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSAlysSVLLYDNLNQPGLIRYNSC 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  217 S---VVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAAT------RKGVGTLAVVLGT 287
Cdd:cd15055 152 YgecVVVVNFIWGVVDLVLTFILPCTVMIVLYMRIFVVARSQARAIRSHTAQVSLEGSSKKvskkseRKAAKTLGIVVGV 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 4885341  288 FGASWLPFAIYCVVGSHEDPAVYTYATLLPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15055 232 FLLCWLPYYIVSLVDPYISTPSSVFDVLIWLGYfNSCLNPLIYALFYPWFRKAL 285
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
83-336 5.53e-18

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 82.32  E-value: 5.53e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   83 GTVIAgeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVP-----SETVSLLTVGFLVASFAASVS 157
Cdd:cd15329  13 GTVVG--NALVIIAVCLVKKLRTPSNYLIVSLAVSDLLVAL-LVMPLAIIYELSgywpfGEILCDVWISFDVLLCTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  158 SLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERA-ACSVVRPLARSHVALLsAAFFM 236
Cdd:cd15329  90 NLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISIPPLFGWKNKVNDPgVCQVSQDFGYQIYATF-GAFYI 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  237 VFGIMLHLYVRIcqvvWRHAHQialqqhclapphlaaTRKGVGTLAVVLGTFGASWLPFAIY------CVVGSHEDPAVY 310
Cdd:cd15329 169 PLIVMLVLYYKI----YRAAKS---------------ERKAIKTLGIIMGAFTLCWLPFFILallrpfLKPIKCSCIPLW 229
                       250       260
                ....*....|....*....|....*..
gi 4885341  311 TYATLLPATY-NSMINPIIYAFRNQEI 336
Cdd:cd15329 230 LSRLFLWLGYaNSFLNPIIYAKFNREF 256
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
83-338 1.36e-17

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 81.49  E-value: 1.36e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   83 GTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTV---------GFLVASFA 153
Cdd:cd15353  11 GIVSLLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETVVITLLNGNDTDAQSFtvnidnvidSVICSSLL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTvslglgllpvlgwnclaeraACSVVRPL----ARSHVAL 229
Cdd:cd15353  91 ASICSLLSIAVDRYFTIFYALQYHNIMTVRRAGVIITCIWT--------------------ACTVSGVLfiiySDSSVVI 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 --LSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHClAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV--VGSHE 305
Cdd:cd15353 151 icLISMFFTMLALMASLYVHMFLLARLHIKRIAVLPGT-GPIRQGANMKGAITLTILLGVFVVCWAPFFLHLIfyISCPR 229
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 4885341  306 DPAVYTYAT-----LLPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15353 230 NPYCVCFMShfnmyLILIMCNSVIDPLIYAFRSQELRK 267
7tmA_S1PR3_Edg3 cd15345
sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial ...
77-339 2.10e-17

sphingosine-1-phosphate receptor subtype 3 (S1PR3 or S1P3), also called endothelial differentiation gene 3 (Edg3), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320467 [Multi-domain]  Cd Length: 270  Bit Score: 81.02  E-value: 2.10e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVF---QYLVPSETVSLLTVGFLVASFA 153
Cdd:cd15345   5 IFFLVICSFIVLENLMVLIAIWKNNRFHNRMYFFIGNLALCDLLAGIAYKVNILMsgkKTFSLSPTQWFLREGSMFVALG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLgVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSA 232
Cdd:cd15345  85 ASTFSLLAIAIERHLTMIKMRPYDANKRYR-VFLLIGTCWLISVLLGALPILGWNCLDNLPDCSTILPLySKKYVAFCIS 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIAlqQHCLAPPHLAATRkgvgTLAVVLGTFGASWLPFAIYCV--VGSHEDPAVY 310
Cdd:cd15345 164 IFIAILVAIVILYARIYILVKSSSRRVT--NHRNSERSMALLR----TVVIVVGVFIACWSPLFILLLidVACEVKQCPI 237
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  311 TYAT---LLPATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15345 238 LYKAdwfIALAVLNSAMNPIIYTLASKEMRRA 269
7tmA_CB1 cd15340
cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G ...
77-340 3.61e-17

cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320462 [Multi-domain]  Cd Length: 292  Bit Score: 80.72  E-value: 3.61e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRT-PMFVLVGSLATADLLAGCGLILHFVFQYLV---PSETVSLLTVGFLVASF 152
Cdd:cd15340   5 VLSLTLGTFTVLENLLVLCVILHSRSLRCrPSYHFIGSLAVADLLGSVIFVYSFLDFHVFhrkDSPNVFLFKLGGVTASF 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALL-- 230
Cdd:cd15340  85 TASVGSLFLTAIDRYISIHRPLAYKRIVTRTKAVIAFCVMWTIAIVIAVLPLLGWNCKKLNSVCSDIFPLIDETYLMFwi 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 -SAAFFMVFGIMLHLYvricqVVWR-HAHQIALQQ-----------------HCLAPPHLAATRKGVGTLAVVLGTFGAS 291
Cdd:cd15340 165 gVTSVLLLFIVYAYMY-----ILWKaHHHAVRMLQrgtqksiivytsedgkvQTTRPDQTRMDIRLAKTLVLILVVLIIC 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 4885341  292 WLPF---AIYCVVGSHED--PAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15340 240 WGPLlaiMVYDVFGKMNKliKTVFAFCSML-CLLNSTVNPIIYALRSKDLRHAF 292
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
90-340 4.72e-17

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 80.02  E-value: 4.72e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15330  18 NACVVAAIALERSLQNVANYLIGSLAVTDLMVSV-LVLPMAALYQVLNkwtlgQVTCDLFIALDVLCCTSSILHLCAIAL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERA---ACSVVRPLARSHVALLsAAFFMVFGIM 241
Cdd:cd15330  97 DRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISIPPMLGWRTPEDRSdpdACTISKDPGYTIYSTF-GAFYIPLILM 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTyATLLPATY- 320
Cdd:cd15330 176 LVLYGRIFKAAARE-------------------RKTVKTLGIIMGTFILCWLPFFIVALVLPFCESTCHM-PELLGAIIn 235
                       250       260
                ....*....|....*....|....*
gi 4885341  321 -----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15330 236 wlgysNSLLNPIIYAYFNKDFQSAF 260
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
79-337 6.61e-17

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 79.98  E-value: 6.61e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   79 LCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSET---VSLLTVGFLVASFAAS 155
Cdd:cd15069   8 LIIAALSVAG-NVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGL-FAIPFAITISLGFCTdfhSCLFLACFVLVLTQSS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  156 VSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN-------CLAERA------ACSVVRPL 222
Cdd:cd15069  86 IFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGLTPFLGWNkamsatnNSTNPAdhgtnhSCCLISCL 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  223 ARSHVALLSAAFFMVFG-------IMLHLYVRICQVVWRHAHQIALQQHclAPPHLAATRKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15069 166 FENVVPMSYMVYFNFFGcvlppllIMLVIYIKIFLVACRQLQRTELMDH--SRTTLQREIHAAKSLAIIVGIFALCWLPV 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  296 -AIYCVVGSHED-----PAVYTYATLLPATYNSMINPIIYAFRNQEIQ 337
Cdd:cd15069 244 hILNCITLFQPEfskskPKWAMNVAILLSHANSVVNPIVYAYRNRDFR 291
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
90-331 9.41e-17

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 79.21  E-value: 9.41e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCglilhFVFQylvPSETVSLLTVGFLVASF------------AASVS 157
Cdd:cd15314  18 NLLVIISIAHFKQLHTPTNYLILSLAVADLLVGG-----LVMP---PSMVRSVETCWYFGDLFckihssfditlcTASIL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  158 SLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSL--------GLGLLPVLGWNCLAERAACSVVRPLARSHVAL 229
Cdd:cd15314  90 NLCFISIDRYYAVCQPLLYRSKITVRVVLVMILISWSVSAlvgfgiifLELNIKGIYYNHVACEGGCLVFFSKVSSVVGS 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LsAAFFMVFGIMLHLYVRICQVVWRHAHQIalqQHCLAPPHLAAT---RKGVGTLAVVLGTFGASWLPFAIYCVV---GS 303
Cdd:cd15314 170 V-FSFYIPAVIMLCIYLKIFLVAQRQARSI---QSARTKSGASSSkmeRKATKTLAIVMGVFLLCWTPFFLCNIIdpfIN 245
                       250       260
                ....*....|....*....|....*...
gi 4885341  304 HEDPAVYTYATLLPATYNSMINPIIYAF 331
Cdd:cd15314 246 YSIPPVLIEVLNWLGYSNSTLNPFIYAF 273
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
73-339 3.01e-16

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 77.77  E-value: 3.01e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVP------SETVSLLTVG 146
Cdd:cd15053   1 NYWALFLLLLPLLTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAI-LVMPFAVYVEVNggkwylGPILCDIYIA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  147 FLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAER--AACSVVRPLAR 224
Cdd:cd15053  80 MDVMCSTASIFNLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGLNNVPYRdpEECRFYNPDFI 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 SHVALLSaaFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSH 304
Cdd:cd15053 160 IYSSISS--FYIPCIVMLLLYYRIFRALRRE-------------------KKATKTLAIVLGVFLFCWLPFFTLNILNAI 218
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 4885341  305 ED----------PAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15053 219 CPklqnqschvgPALFSLTTWL-GYVNSFLNPIIYTIFNIEFRKA 262
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
89-338 1.22e-15

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 76.13  E-value: 1.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   89 ENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTV----------GFLVASFAASVSS 158
Cdd:cd15354  17 ENILVILAIVKNKNLHSPMYFFVCSLAVADMLVSVSNAWETITIYLLNNRHLVIEDAfvrhidnvfdSLICISVVASMCS 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSlglgllpvlgwnclaerAACSVVRPL---ARSHVALLSAAFF 235
Cdd:cd15354  97 LLAIAVDRYVTIFYALRYHNIMTVRRAGIIIACIWTFC-----------------TGCGIIFILyseSTYVIICLITMFF 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFGIMLHLYVRICQVVWRHAHQIALQQHClAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYA-- 313
Cdd:cd15354 160 AMLFLMVSLYIHMFLLARTHVKRIAALPGY-NSVRQRTSMKGAVTLTILLGIFIVCWAPFFLHLILMISCPQNLYCVCfm 238
                       250       260       270
                ....*....|....*....|....*....|
gi 4885341  314 -----TLLPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15354 239 shfnmYLILIMCNSVIDPLIYAFRSQEMRK 268
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
85-339 2.55e-15

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 75.57  E-value: 2.55e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   85 VIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVP-----SETVSLLTVGFLVASFAASVSSL 159
Cdd:cd15058  13 AIVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGL-LVVPLGATIVVTgkwqlGNFWCELWTSVDVLCVTASIETL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  160 LAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLG----------LLPVLGWNCLAERAACSVVrplARSHVAL 229
Cdd:cd15058  92 CVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWIVSALVSfvpimnqwwrANDPEANDCYQDPTCCDFR---TNMAYAI 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LSA--AFFMVFGIMLHLYVRICQVVWRHAHQIA-----LQQHCLAP-PHLAATRKGVG----------------TLAVVL 285
Cdd:cd15058 169 ASSvvSFYIPLLIMIFVYARVFLIATRQLQLIDkrrlrFQSECPAPqTTSPEGKRSSGrrpsrltvvkehkalkTLGIIM 248
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 4885341  286 GTFGASWLPFAIYCVVGSHEDPAVYTYATLL---PATYNSMINPIIYAfRNQEIQRA 339
Cdd:cd15058 249 GTFTLCWLPFFIANIINVFNRNLPPGEVFLLlnwLGYINSGLNPIIYC-RSPEFRTA 304
7tmA_D3_dopamine_R cd15310
D3 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
90-340 2.95e-15

D3 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320436 [Multi-domain]  Cd Length: 259  Bit Score: 74.62  E-value: 2.95e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVP-----SETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15310  18 NVLVCMAVLRERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGgvwnfSRICCDVFVTLDVMMCTASILNLCAISI 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLS-----LYNALTYYSRRTLlgVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSaaFFMVFG 239
Cdd:cd15310  98 DRYTAvvmpvHYQHGTGQSSCRR--VSLMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNPDFVIYSSVVS--FYLPFG 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  240 IMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGS-----HEDPAVYTYAT 314
Cdd:cd15310 174 VTLLVYVRIYVVLLRE-------------------KKATQMLAIVLGAFIVCWLPFFLTHILNThcqacHVPPELYSATT 234
                       250       260
                ....*....|....*....|....*.
gi 4885341  315 LLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15310 235 WL-GYVNSALNPVIYTTFNIEFRRAF 259
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
72-340 4.68e-15

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 74.43  E-value: 4.68e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   72 VNPWDVLLCVSGTVIAgENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLV---------PSE-TVS 141
Cdd:cd15350   1 VVPEEVFFTIAAVGLL-ENLLVLVAVIKNKNLHSPMYFFICSLAVSDMLGSLYKTLENILIILAdmgylnrrgPFEtKLD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  142 LLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNclaeraacsvvrp 221
Cdd:cd15350  80 DIMDSLFCLSLLGSIFSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWTFCGGSGILMILFFH------------- 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 lARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLApPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV 301
Cdd:cd15350 147 -FVATVICFTVLFFLMLVLILCLYVHMFLLARSHARKIASLPNHHA-QHQRSNMRGAITLTILLGVFVCCWAPFVLHLLL 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 4885341  302 GS--HEDPAVYTYATLLPA-----TYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15350 225 MMfcPMNPYCACYRSLFQVngtliMSHAVIDPAIYAFRSPELRNTF 270
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
75-340 4.71e-15

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 74.70  E-value: 4.71e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGtviageNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLV 149
Cdd:cd15312   9 GAILLTVFG------NLMVIISISHFKQLHSPTNFLILSLAITDFLLGF-LVMPYSMVRSVEScwyfgDLFCKIHSSLDM 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 ASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL------LPVLGWNCLAERAACSVVRPLA 223
Cdd:cd15312  82 MLSTTSIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFgvvfseVNLEGIEDYVALVSCTGSCVLI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  224 RSH---VALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPH-----LAATRKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15312 162 FNKlwgVIASLIAFFIPGTVMIGIYIKIFFVARKHAKVINNRPSVTKGDSknklsKKKERKAAKTLSIVMGVFLLCWLPF 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 4885341  296 AIYCVVgsheDP------AVYTYATLLPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15312 242 FVATLI----DPflnfstPVDLFDALVWLGYfNSTCNPLIYGFFYPWFQKAF 289
7tmA_5-HT1A_invertebrates cd15331
serotonin receptor subtype 1A from invertebrates, member of the class A family of ...
77-339 7.22e-15

serotonin receptor subtype 1A from invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320454 [Multi-domain]  Cd Length: 261  Bit Score: 73.54  E-value: 7.22e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSEtVSLLTVGFLVAS 151
Cdd:cd15331   6 ILGLLILATIIG-NVFVIAAILLERSLQGVSNYLILSLAVADLMVAVlvmplSAVYEVSQHWFLGPE-VCDMWISMDVLC 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNaLTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWnclaeRAACSVVRPLaRSHVALLS 231
Cdd:cd15331  84 CTASILHLVAIALDRYWAVTN-IDYIRRRTAKRILIMIAVVWFVSLIISIAPLFGW-----KDEDDLDRVL-KTGVCLIS 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 -----------AAFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCV 300
Cdd:cd15331 157 qdygytifstvGAFYVPLLLMIIIYWKIYQAAKRE-------------------RKAARTLAIITGAFVVCWLPFFLVAL 217
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 4885341  301 VG---SHEDPAVYTYATLLPATY-NSMINPIIYAFRNQEIQRA 339
Cdd:cd15331 218 VMpfcGAWQISRFLESFFLWLGYfNSLLNPIIYTIFSPDFRGA 260
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
86-339 7.43e-15

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 74.31  E-value: 7.43e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   86 IAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLL 160
Cdd:cd15065  14 IFG-NVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVAL-LVMTFavvndLLGYWLFGETFCNIWISFDVMCSTASILNLC 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGWNCLAERAACSVVRPLARSHVALL--------- 230
Cdd:cd15065  92 AISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALISFLpIHLGWHRLSQDEIKGLNHASNPKPSCALdlnptyavv 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 --SAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQ--------HCLAPPHLAATRKGVG------TLAVVLGTFGASWLP 294
Cdd:cd15065 172 ssLISFYIPCLVMLLIYSRLYLYARKHVVNIKSQKlpsesgskFQVPSLSSKHNNQGVSdhkaavTLGIIMGVFLICWLP 251
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 4885341  295 FAIYCVVGSHED----PAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15065 252 FFIINIIAAFCKtcipPKCFKILTWL-GYFNSCLNPIIYSIFNSEFRRA 299
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
77-340 7.64e-15

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 73.78  E-value: 7.64e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIageNALVVALIASTPALRTPMFVLVGSLATADLL-AGCGLILHFV--FQYLVPSETVSLLTVGFLVASFA 153
Cdd:cd14969   8 SLIGVLGVVL---NGLVIIVFLKKKKLRTPLNLFLLNLALADLLmSVVGYPLSFYsnLSGRWSFGDPGCVIYGFAVTFLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 -ASVSSLLAITVDRYLSLYNALTYY--SRRTLLgvhLLLAATWTVSLGLGLLPVLGWNCLAE---RAACSV----VRPLA 223
Cdd:cd14969  85 lVSISTLAALAFERYLVIVRPLKAFrlSKRRAL---ILIAFIWLYGLFWALPPLFGWSSYVPeggGTSCSVdwysKDPNS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  224 RSH-VALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIA-LQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV 301
Cdd:cd14969 162 LSYiVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKRAArRKNSAITKRTKKAEKKVAKMVLVMIVAFLIAWTPYAVVSLY 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 4885341  302 -----GSHEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14969 242 vsfggESTIPPLLATIPALF-AKSSTIYNPIIYVFMNKQFRRAL 284
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
90-339 2.15e-14

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 72.85  E-value: 2.15e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMF-VLVGSLATADLLAGCgLILHFVFQYLV----PSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15057  18 NALVIAAVLRFRHLRSKVTnYFIVSLAVSDLLVAI-LVMPWAAVNEVagywPFGSFCDVWVSFDIMCSTASILNLCVISV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL-----------LPVLGWNCLAERAACSVVrpLARSHvALLSA- 232
Cdd:cd15057  97 DRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFipvqlgwhradDTSEALALYADPCQCDSS--LNRTY-AISSSl 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 -AFFMVFGIMLHLYVRICQVVWRHAHQIALQ----QHCLAPPH-----LAATRKGVGTLAVVLGTFGASWLPFAI----- 297
Cdd:cd15057 174 iSFYIPVAIMIVTYTRIYRIARRQIRRIAALeraaQESTNPDSslrssLRRETKALKTLSIIMGVFVCCWLPFFIlncvl 253
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  298 -YCVVGSHE----DPAVYTYATLLpATYNSMINPIIYAFrNQEIQRA 339
Cdd:cd15057 254 pFCDLRTAQfpcvPDTTFIVFVWL-GWANSSLNPIIYAF-NADFRKA 298
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
77-339 5.24e-14

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 71.23  E-value: 5.24e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSETVSLLTV------GFLVA 150
Cdd:cd15067   4 VVLSLFCLVTVAGNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGS-IVMPFSILHEMTGGYWLFGRDwcdvwhSFDVL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWnclaeRAACSVVRP----LARSH 226
Cdd:cd15067  83 ASTASILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVWICSALISFPAIAWW-----RAVDPGPSPpnqcLFTDD 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 VALLS----AAFFMVFGIMLHLYVRIcqvvwrhaHQIALQQHclapphlaatrKGVGTLAVVLGTFGASWLPFAIY---- 298
Cdd:cd15067 158 SGYLIfsscVSFYIPLVVMLFTYYRI--------YRAAAKEQ-----------KAAKTLGIVMGVFILCWLPFFVTnili 218
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  299 ------CVvgSHEDpAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15067 219 gfcpsnCV--SNPD-ILFPLVTWL-GYINSGMNPIIYACSSRDFRRA 261
7tmA_LPAR1_Edg2 cd15344
lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial ...
90-336 9.42e-14

lysophosphatidic acid receptor subtype 1 (LPAR1 or LPA1), also called endothelial differentiation gene 2 (Edg2), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 341348 [Multi-domain]  Cd Length: 273  Bit Score: 70.44  E-value: 9.42e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCG-LILHFVFQYLVPSETVS--LLTVGFLVASFAASVSSLLAITVDR 166
Cdd:cd15344  18 NLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAyFYLMFNTGPNTRRLTVStwLLRQGLIDTSLTASVANLLAIAIER 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  167 YLSLYNaLTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMV-FGIMLHLY 245
Cdd:cd15344  98 HITVFR-MQLHTRMSNRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVtFVVMVVLY 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  246 VRICQVVwrHAHQIALQQHCLAPPHLAATRKG-VGTLAVVLGTFGASWLP---FAIYCVVGSHEDPAVYTYATLLPATYN 321
Cdd:cd15344 177 AHIFGYV--RQRTMRMSRHSSGPRRNRDTMMSlLKTVVIVLGAFIICWTPglvLLLLDVCCPQCDVLAYEKFFLLLAEFN 254
                       250
                ....*....|....*
gi 4885341  322 SMINPIIYAFRNQEI 336
Cdd:cd15344 255 SAMNPIIYSYRDKEM 269
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
77-339 1.32e-13

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 70.60  E-value: 1.32e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLVAS 151
Cdd:cd15056   6 FLSLVILLTILG-NLLVIVAVCTDRQLRKKTNYFVVSLAVADLLVAV-LVMPFGAIELVNNrwiygETFCLVRTSLDVLL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYsRRTLLGVHLLLAATWTVSLGLG-LLPVLGWNCLAERAACSVVRPLARSHVALL 230
Cdd:cd15056  84 TTASIMHLCCIALDRYYAICCQPLVY-KMTPLRVAVMLGGCWVIPTFISfLPIMQGWNHIGIEDLIAFNCASGSTSCVFM 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 ----------SAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATR---------KGVGTLAVVLGTFGAS 291
Cdd:cd15056 163 vnkpfaiicsTVAFYIPALLMVLAYYRIYVAAREQAHQIRSLQRAGSSNHEADQHrnsrmrtetKAAKTLGIIMGCFCVC 242
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 4885341  292 WLPFAIYCVVgsheDPAVYTYATLLPATY-------NSMINPIIYAFRNQEIQRA 339
Cdd:cd15056 243 WAPFFVTNIV----DPFIGYRVPYLLWTAflwlgyiNSGLNPFLYAFFNKSFRRA 293
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
77-340 3.10e-13

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 68.89  E-value: 3.10e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIA----GENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLV-------PSETVSLLTV 145
Cdd:cd15049   1 VLICIATGSLSlvtvGGNILVILSFRVNRQLRTVNNYFLLSLACADLIIGL-VSMNLYTVYLVmgywplgPLLCDLWLAL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  146 GFLVAsfAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCL-AERA----ACSvVR 220
Cdd:cd15049  80 DYVAS--NASVMNLLLISFDRYFSVTRPLTYRAKRTPKRAILMIALAWVISFVLWAPAILGWQYFvGERTvpdgQCY-IQ 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  221 PLARSHVALLS--AAFFMVFGIMLHLYVRIcqvvWRHAhqialqqhclapphlAATRKGVGTLAVVLGTFGASWLPFAIY 298
Cdd:cd15049 157 FLDDPAITFGTaiAAFYLPVLVMTILYWRI----YRET---------------ARERKAARTLSAILLAFIITWTPYNIL 217
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  299 CVVGSHEDPAVYTyaTLLPATY-----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15049 218 VLVSTFCAKCIPD--TLWSFGYwlcyiNSTINPFCYALCNKTFRKTF 262
7tmA_5-HT1B_1D cd15333
serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G ...
90-339 3.36e-13

serotonin receptor subtypes 1B and 1D, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320455 [Multi-domain]  Cd Length: 265  Bit Score: 68.67  E-value: 3.36e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSEtvslLTVGFLVASF---------AASVSSLL 160
Cdd:cd15333  22 NAFVIATIYLTRKLHTPANYLIASLAVTDLLVSI-LVMPISIVYTVTGT----WTLGQVVCDIwlssditccTASILHLC 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAER--AACSVVRPLARSHVALLSAAFFMVF 238
Cdd:cd15333  97 VIALDRYWAITDAVEYSKKRTPKRAAVMIALVWVISISISLPPFFWRQAKAEEevSECVVNTDHILYTVYSTVGAFYIPT 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRIcqvvWRHAHqialqqhclapphlAATRKGVGTLAVVLGTFGASWLPFAIYCVV------GSHEDPAVYTY 312
Cdd:cd15333 177 LLLIALYGRI----YVEAR--------------ARERKATKTLGIILGAFIVCWLPFFIISLVlpickdACWFHLAIFDF 238
                       250       260
                ....*....|....*....|....*..
gi 4885341  313 ATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15333 239 FTWL-GYLNSLINPIIYTMSNEDFKQA 264
7tmA_MC3R cd15352
melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G ...
83-338 1.08e-12

melanocortin receptor subtype 3, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320474 [Multi-domain]  Cd Length: 272  Bit Score: 67.61  E-value: 1.08e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   83 GTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL----------LTVGFLVASF 152
Cdd:cd15352  11 GIVSLLENILVILAVVKNKNLHSPMYFFLCSLAVADMLVSVSNSLETIMIAVLNSGYLVIsdqfiqhmdnVFDSMICISL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLgllpvlgwnclaerAACSVVRPLARSHVALLSA 232
Cdd:cd15352  91 VASICNLLAIAVDRYVTIFYALRYHSIMTVRKALVLIAVIWVVCIVC--------------GIVFIVYSESKTVIVCLIT 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAP-PHLAATRKGVGTLAVVLGTFGASWLPFAIYCV--VGSHEDPAV 309
Cdd:cd15352 157 MFFAMLVLMATLYVHMFLFARLHVKRIAALPPAVDGaPQQRSCMKGAVTITILLGVFIVCWAPFFLHLIliISCPHNPYC 236
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  310 YTYAT-----LLPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15352 237 LCYTShfntyLVLIMCNSVIDPLIYAFRSLEMRK 270
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
77-339 1.67e-12

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 66.75  E-value: 1.67e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVAS 151
Cdd:cd15063   5 LVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGT-LVLPFsavneVLDVWIFGHTWCQIWLAVDVWM 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE-------RAACSVVRPLAR 224
Cdd:cd15063  84 CTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVICFPPLVGWNDGKDgimdysgSSSLPCTCELTN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 SHVALLSAA---FFMVFGIMLHLYVRICQVVWRHAhqialqqhclapphlaatrKGVGTLAVVLGTFGASWLPFA-IYCV 300
Cdd:cd15063 164 GRGYVIYSAlgsFYIPMLVMLFFYFRIYRAARMET-------------------KAAKTVAIIVGCFIFCWLPFFtVYLV 224
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 4885341  301 VGSHED---PAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15063 225 RAFCEDcipPLLFSVFFWL-GYCNSALNPCIYALFSRDFRFA 265
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
78-340 1.82e-12

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 67.09  E-value: 1.82e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVIAGENALVVAL-IASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLVAS 151
Cdd:cd15317   5 IVLVLAMLITVSGNLVVIIsISHFKQLHSPTNMLVLSLATADFLLGL-CVMPFSMIRTVETcwyfgDLFCKFHTGLDLLL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATW------TVSLGLGLLPVLGWNCLAERAAC--SVVRPLA 223
Cdd:cd15317  84 CTTSIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWlvpgiyTFGLIYTGANDEGLEEYSSEISCvgGCQLLFN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  224 RSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQI--------ALQQHCLAPPHlAATRKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15317 164 KIWVLLDFLTFFIPCLIMIGLYAKIFLVARRQARKIqnmedkfrSSEENSSKASA-SRERKAAKTLAIVMGIFLFCWLPY 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  296 AIYCVVGSHED---PAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15317 243 FIDTIVDEYSNfitPAIVFDAVIWLGYFNSAFNPFIYAFFYPWFRKAF 290
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
78-340 1.95e-12

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 67.24  E-value: 1.95e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSeTVSLLTVGFLVASF 152
Cdd:cd15959   6 LLSLAILVIVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLlvvppGATILLTGHWPLGT-TVCELWTSVDVLCV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGW----------NCLAERAACSVVRP 221
Cdd:cd15959  85 TASIETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISFLpIMNQWwrdgadeeaqRCYDNPRCCDFVTN 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARSHVAlLSAAFFMVFGIMLHLYVRICQVVWRHAHQIA--LQQHCLAPPHLAATRKGVG----------------TLAV 283
Cdd:cd15959 165 MPYAIVS-STVSFYVPLLVMIFVYVRVFVVATRQVRLIRkdKVRFPPEESPPAESRPACGrrpsrllaikehkalkTLGI 243
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  284 VLGTFGASWLPFAIYCVVGSHEDPAVYTYATLL---PATYNSMINPIIYAfRNQEIQRAL 340
Cdd:cd15959 244 IMGTFTLCWLPFFVANIIKVFCRSLVPDPAFLFlnwLGYANSAFNPIIYC-RSPDFRSAF 302
7tmA_Histamine_H3R_H4R cd15048
histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G ...
77-339 3.09e-12

histamine receptor subtypes H3R and H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtypes H3R and H4R, members of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320176 [Multi-domain]  Cd Length: 296  Bit Score: 66.56  E-value: 3.09e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRT--PMFVLvgSLATADLLAGCGLIL----HFVFQYLVPSETV--SLLTVGFL 148
Cdd:cd15048   6 LISVLILVTVIG-NLLVILAFIKDKKLRTvsNFFLL--NLAVADFLVGLVSMPfyipYTLTGKWPFGKVFckAWLVVDYT 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  149 VASfaASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA-----CSVvrPLA 223
Cdd:cd15048  83 LCT--ASALTIVLISLDRYLSVTKAVKYRAKQTKRRTVLLMALVWILAFLLYGPAIIGWDLWTGYSIvptgdCEV--EFF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  224 RSHVALLSAA---FFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAAT--------------RKGVGTLAVVLG 286
Cdd:cd15048 159 DHFYFTFITSvleFFIPFISVSFFNLLIYLNIRKRSRRRPLRSVPILPASQNPSrarsqreqvklrrdRKAAKSLAILVL 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 4885341  287 TFGASWLPFAIYCVV-----GSHEDPAVYTYATLLPATyNSMINPIIYAFRNQEIQRA 339
Cdd:cd15048 239 VFLICWAPYTILTIIrsfcsGSCVDSYLYEFTFWLLWT-NSAINPFLYAACHPRFRKA 295
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
85-333 3.36e-12

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 66.16  E-value: 3.36e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   85 VIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGcGLILHFVFQYLVPSE--------TVSLLtvgFLVASFAASV 156
Cdd:cd15390  13 VAIGGNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLIS-AFNTVFNFTYLLYNDwpfglfycKFSNF---VAITTVAASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  157 SSLLAITVDRYLSLYNALTY-YSRRTLLGVHL---LLAATWTV-SLGLGLLPVLGWNCLAERAACSVVRPLARS------ 225
Cdd:cd15390  89 FTLMAISIDRYIAIVHPLRPrLSRRTTKIAIAviwLASFLLALpQLLYSTTETYYYYTGSERTVCFIAWPDGPNslqdfv 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 -HVALLSAAFFMVFGIMLHLYVRICQVVWRHA---HQIALQQHclappHLAATRKGVGTLAVVLGTFGASWLPFAIYCVV 301
Cdd:cd15390 169 yNIVLFVVTYFLPLIIMAVAYTRVGVELWGSKtigENTPRQLE-----SVRAKRKVVKMMIVVVVIFAICWLPYHLYFIL 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 4885341  302 gSHEDPAVYTY--------ATLLPATYNSMINPIIYAFRN 333
Cdd:cd15390 244 -TYLYPDINSWkyiqqiylAIYWLAMSNSMYNPIIYCWMN 282
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
90-335 4.62e-12

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 65.57  E-value: 4.62e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLI-LHFVFQYLVPSETVSLLTVGFLVASFA-ASVSSLLAITVDRY 167
Cdd:cd15070  18 NVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIpLAIVVSLGVTIHFYSCLFMSCLLVVFThASIMSLLAIAVDRY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  168 LSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNclAERAACSVVRPLARSHVALLSAAFFMVF--------- 238
Cdd:cd15070  98 LRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGLTPMFGWN--RKPSLESVNTTPLQCQFTSVMRMDYMVYfsfftwili 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 --GIMLHLYVRICQVVWRHAHQiALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIY-CVVGSH-EDPAVYTYAT 314
Cdd:cd15070 176 plVIMCALYVDIFYIIRNKLSQ-NATGFRETGAFYGREFKTAKSLALVLFLFAVCWLPLSIInCVVYFNpKVPKIALYLG 254
                       250       260
                ....*....|....*....|.
gi 4885341  315 LLPATYNSMINPIIYAFRNQE 335
Cdd:cd15070 255 ILLSHANSMMNPIVYACKIKK 275
7tmA_S1PR4_Edg6 cd15349
sphingosine-1-phosphate receptor subtype 4 (S1PR4 or S1P4), also called endothelial ...
79-340 5.62e-12

sphingosine-1-phosphate receptor subtype 4 (S1PR4 or S1P4), also called endothelial differentiation gene 6 (Edg6), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320471 [Multi-domain]  Cd Length: 271  Bit Score: 65.19  E-value: 5.62e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   79 LCVSGTVIAgENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVF---QYLVPSETVSLLTVGFLVASFAAS 155
Cdd:cd15349   8 ICISVLIIL-ENLLVLLAILRRVRLRRWVYICLANIALSDLLTGTSYLVNICLsgeRTFRLTPALWFLREGLLFTALAAS 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  156 VSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPL-ARSHVALLSAAF 234
Cdd:cd15349  87 TFSLLVTAVERYATMVRPVAENTATKTYRVYGMIVLCWILAFLIGFLPLLGWNCLCDFRSCSSLLPLySKSYILFCLVIF 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  235 FMVFGIMLHLYVRICQVVWRHAHQIAlqqhclAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYA- 313
Cdd:cd15349 167 FIILLTIIGLYFAIYCLVRASGQRVI------SARSRRRSLRLLKTVLMILGAFMVCWGPLFILLLVDFFCSSRSCKPLf 240
                       250       260       270
                ....*....|....*....|....*....|.
gi 4885341  314 ----TLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15349 241 gmewVLALAVLNSAINPLIYSFRSLEVRRAV 271
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
78-340 1.84e-11

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 64.16  E-value: 1.84e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGtviageNALVVALIASTPALRTP--MFVLvgSLATADLLAGCglilhFVfqylVPSETVSLLTVGFLVASF--- 152
Cdd:cd14993  12 LLALVG------NSLVIAVVLRNKHMRTVtnYFLV--NLAVADLLVSL-----FC----MPLTLLENVYRPWVFGEVlck 74
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 ----------AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA------- 215
Cdd:cd14993  75 avpylqgvsvSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPLLVVYELEEIISSepgtiti 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  216 --CSVVRPLARSHVALLSAAFFMVF----GIMLHLYVRICQVVWRHA--HQIALQQHCLAPPHLAATRKGVGTLAVVLGT 287
Cdd:cd14993 155 yiCTEDWPSPELRKAYNVALFVVLYvlplLIISVAYSLIGRRLWRRKppGDRGSANSTSSRRILRSKKKVARMLIVVVVL 234
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4885341  288 FGASWLPFAIYCVV----GSHEDPAVYTYATLLPATY-----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd14993 235 FALSWLPYYVLSILldfgPLSSEESDENFLLILPFAQllgysNSAINPIIYCFMSKKFRRGF 296
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
90-340 2.37e-11

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 63.43  E-value: 2.37e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15334  18 NSLVITAIIVTRKLHHPANYLICSLAVTDFLVAV-LVMPFSIMYIVKEtwimgQVVCDIWLSVDITCCTCSILHLSAIAL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERA-ACSVVRPLARSHVALLSAAFFMVFGIMLH 243
Cdd:cd15334  97 DRYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISMPPLFWRHQTTSREdECIIKHDHIVFTIYSTFGAFYIPLALILI 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  244 LYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVV-----GSHEDPAVYTYATLLpA 318
Cdd:cd15334 177 LYYKIYRAATRE-------------------RKAATTLGLILGAFVICWLPFFVKEVIvntcdSCYISEEMSNFLTWL-G 236
                       250       260
                ....*....|....*....|..
gi 4885341  319 TYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15334 237 YINSLINPLIYTIFNEDFKKAF 258
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
86-340 3.63e-11

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 62.99  E-value: 3.63e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   86 IAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLL 160
Cdd:cd15326  15 IVG-NILVILSVVCNRHLRIPTNYFIVNLAIADLLLSF-TVLPFsatleILGYWVFGRIFCDIWAAVDVLCCTASILSLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAAcSVVRPLARSHVALLS--AAFFMVF 238
Cdd:cd15326  93 AISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIGPLLGWKEPAPPDD-KVCEITEEPFYALFSslGSFYIPL 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRICQVVWRHAHQialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGS---HEDPAVYTYATL 315
Cdd:cd15326 172 IVILVMYCRVYIVALKFSRE----------------KKAAKTLGIVVGMFILCWLPFFIALPLGSlfsHLKPPETLFKII 235
                       250       260
                ....*....|....*....|....*.
gi 4885341  316 LPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15326 236 FWLGYfNSCLNPIIYPCSSKEFKRAF 261
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
90-340 7.74e-11

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 61.97  E-value: 7.74e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15059  18 NVLVIVAVLTSRKLRAPQNWFLVSLAVADILVGL-LIMPFslvneLMGYWYFGSVWCEIWLALDVLFCTASIVNLCAISL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGW-NCLAERAACSVVRPLARSHVALLSAA--FFMVFGIM 241
Cdd:cd15059  97 DRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISLPPLFGWkDEQPWHGAEPQCELSDDPGYVLFSSIgsFYIPLLIM 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRICQVvwrhahqialqqhclappHLAATRKGVGTLAVVLGTFGASWLP-FAIY--CVVGSHEDPAVYTYATLLPA 318
Cdd:cd15059 177 IIVYARIYRA------------------AKRKERRFTLVLGVVMGAFVLCWLPfFFTYplVVVCKTCGVPELLFKFFFWL 238
                       250       260
                ....*....|....*....|...
gi 4885341  319 TY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15059 239 GYcNSALNPVIYTIFNKDFRRAF 261
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
77-340 1.07e-10

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 61.58  E-value: 1.07e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLA---GCGLILHFVFQYLVPSETVSLLTVGFLVASFA 153
Cdd:cd15083   5 IFILIIGLIGVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMcilNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 -ASVSSLLAITVDRYLSL---YNALTYYSRRTLLGVhllLAATWTVSLGLGLLPVLGWNC-LAERAACSVV------RPL 222
Cdd:cd15083  85 iMSINTLAAIAVDRYLVItrpMKASVRISHRRALIV---IAVVWLYSLLWVLPPLFGWSRyVLEGLLTSCSfdylsrDDA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  223 ARSHV-ALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKG----VGTLAVVLGT---FGASWLP 294
Cdd:cd15083 162 NRSYViCLLIFGFVLPLLIIIYCYSFIFRAVRRHEKAMKEMAKRFSKSELSSPKARrqaeVKTAKIALLLvllFCLAWTP 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 4885341  295 FAIYCVVGSHEDPAVYT-YATLLPATYNSM---INPIIYAFRNQEIQRAL 340
Cdd:cd15083 242 YAVVALIGQFGYLEVLTpLATAIPAAFAKTsaiYNPVIYAFSHPKFRRAL 291
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
90-337 1.20e-10

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 61.49  E-value: 1.20e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGcglILHFVFQYLVPSETVSLLTVGFLVASF-----AASVSSLLAITV 164
Cdd:cd15068  18 NVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVG---VLAIPFAITISTGFCAACHGCLFIACFvlvltQSSIFSLLAIAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN-------CLAERAAC--SVVRPLARSHVALLSAAFF 235
Cdd:cd15068  95 DRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNncgqpkeGKNHSQGCgeGQVACLFEDVVPMNYMVYF 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFG-------IMLHLYVRICQVVWRHAHQIALQQHC--LAPPHLAATRKGVGTLAVVLGTFGASWLP------FAIYCV 300
Cdd:cd15068 175 NFFAcvlvpllLMLGVYLRIFLAARRQLKQMESQPLPgeRARSTLQKEVHAAKSLAIIVGLFALCWLPlhiincFTFFCP 254
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  301 VGSHEdPAVYTYATLLPATYNSMINPIIYAFRNQEIQ 337
Cdd:cd15068 255 DCSHA-PLWLMYLAIVLSHTNSVVNPFIYAYRIREFR 290
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
75-338 1.20e-10

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 61.68  E-value: 1.20e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSE-----TVSLLTVGFLV 149
Cdd:cd14992   3 LGVALVVIILVSVVGNFIVIAALARHKNLRGATNYFIASLAISDLLMAL-FCTPFNFTYVVSLSweyghFLCKIVNYLRT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 ASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACS-VVRPLAR---- 224
Cdd:cd14992  82 VSVYASSLTLTAIAFDRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLYYATTEVLFSVKNqEKIFCCQippv 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 --------SHVALLSAAFFMVFGIMLHLYVRICQVVWRHaHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFA 296
Cdd:cd14992 162 dnktyekvYFLLIFVVIFVLPLIVMTLAYARISRELWFR-KVPGFSIKEVERKRLKCKRRVIKMLVCVVVLFVICWLPFH 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 4885341  297 IYCVVGSHEDPAVYTYATLLP-------ATYNSMINPIIYAFRNQEIQR 338
Cdd:cd14992 241 LFFLLRDFFPLIMKEKHTLQVyyflhwiAMSNSMYNPIIYVTLNNNFRK 289
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
78-340 1.42e-10

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 61.41  E-value: 1.42e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVI-AGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFvfqylvpSETVSLLTVGFLVASFA--- 153
Cdd:cd15318   5 LACAIGMLIiVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGL-TVLPF-------STIRSVESCWYFGDSFCrlh 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ---------ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGwNCLAERAACSVVR-PLA 223
Cdd:cd15318  77 tcldtlfclTSIFHLCFISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLVPTVYTSVFLYT-KAVEEGLAELLTSvPCV 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  224 RSHVALLSA--------AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHlAATRKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15318 156 GSCQLLYNKlwgwlnfpVFFIPCLIMIGLYVKIFIVAKRQARAIASLLSDTNGAS-KRERKAAKTLGIAVGVYLLCWLPF 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  296 AIYCVVGSHED---PAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15318 235 TIDTMVDSLLNfitPPLLFDIIIWFAYFNSACNPLIYVFSYPWFRKAL 282
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
88-339 2.27e-10

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 60.58  E-value: 2.27e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   88 GENALVVALIASTPALRTPMFVLVGSLATADLLAGcGLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAI 162
Cdd:cd15062  16 GGNLLVILSVACNRHLRTPTHYFIVNLAVADLLLS-FTVLPFsatleVLGYWAFGRIFCDVWAAVDVLCCTASIMSLCVI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN--CLAERAACSVVRPLArshVALLSA--AFFMVF 238
Cdd:cd15062  95 SVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISIGPLLGWKepAPADEQACGVNEEPG---YVLFSSlgSFYLPL 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRICQVVWRHAHQialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGS-----HEDPAVYTYA 313
Cdd:cd15062 172 AIILVMYCRVYVVAFKFSRE----------------KKAAKTLGIVVGAFVLCWFPFFVVLPLGSlfstlKPPEPVFKVV 235
                       250       260
                ....*....|....*....|....*.
gi 4885341  314 TLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15062 236 FWL-GYFNSCLNPIIYPCSSREFKRA 260
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
78-339 3.12e-10

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 60.14  E-value: 3.12e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVIAgeNALVVALIASTPALRTPMFVLVGSLATADL-LAGCGLILHFVFQYL---VPSETVSLLTVGFLVASFA 153
Cdd:cd15060   8 SVIIAFTIVG--NILVILSVFTYRPLRIVQNFFIVSLAVADLaVAIFVLPLNVAYFLLgkwLFGIHLCQMWLTCDILCCT 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN----CLAERAACSVVRplARSHVAL 229
Cdd:cd15060  86 ASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIGWNdwpeNFTETTPCTLTE--EKGYVIY 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LSA-AFFMVFGIMLHLYVRICQVVwrhahqialqqhclapphlAATRKGVGTLAVVLGTFGASWLPFAIYCVV-----GS 303
Cdd:cd15060 164 SSSgSFFIPLLIMTIVYVKIFIAT-------------------SKERRAARTLGIIMGVFVVCWLPFFLMYVIlpfceTC 224
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 4885341  304 HEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15060 225 SPSAKVVNFITWL-GYVNSALNPVIYTIFNLDFRRA 259
7tmA_BNGR-A34-like cd15000
putative neuropeptide receptor BNGR-A34 and similar proteins, member of the class A family of ...
77-339 3.85e-10

putative neuropeptide receptor BNGR-A34 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor BNGR-A34 found in silkworm and its closely related proteins from invertebrates. They are members of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320131 [Multi-domain]  Cd Length: 285  Bit Score: 60.13  E-value: 3.85e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGtvIAGeNALVVALIASTPALRTPMFVLVGSLATADLLA----GCGLILHFVFQYLVPSeTVSLLTVGFLVASF 152
Cdd:cd15000   7 LPVVLFG--IFG-NFVLLYILASNRSLRTPTNLLIGNMALADLLTllvcPWMFLVHDFFQNYVLG-SVGCKLEGFLEGSL 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 -AASVSSLLAITVDRYLSLynALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVL-------GWNCLAERAACSVVRPLAR 224
Cdd:cd15000  83 lLASVLALCAVSYDRLTAI--VLPSEARLTKRGAKIVIVITWIVGLLLALPLAIyrsyrerQWKNFLETYCAENTQVLPI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 SHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHclaPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVgSH 304
Cdd:cd15000 161 YWHVIITVLVWLPLGIMLICYSAIFWKLDKYERRVLRREH---PSVVRYKKKAAKTLFIVLITFVVCRIPFTALIFY-RY 236
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  305 EDPAVYTYATLLPATY-------------NSMINPIIYAFRNQEIQRA 339
Cdd:cd15000 237 KLVPNDNTQNSVSGSFhilwfaskylmflNAAVNPLIYGFTNENFRKA 284
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
90-339 5.62e-10

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 59.62  E-value: 5.62e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAgCGLILHFV-FQYLVPS----ETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15096  18 NSLVILVVLSNQQMRSTTNILILNLAVADLLF-VVFCVPFTaTDYVLPTwpfgDVWCKIVQYLVYVTAYASVYTLVLMSL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTV------SLGLGLLPVLGWNCLAERAACsVVRPLARSHVALLSAAFFMV- 237
Cdd:cd15096  97 DRYLAVVHPITSMSIRTERNTLIAIVGIWIVilvaniPVLFLHGVVSYGFSSEAYSYC-TFLTEVGTAAQTFFTSFFLFs 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  238 ----FGIMLHLYVRICQVVWRHAHQIALQqhclAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHE-DPAVYTY 312
Cdd:cd15096 176 ylipLTLICVLYMLMLRRLRRQKSPGGRR----SAESQRGKRRVTRLVVVVVVVFAICWLPIHIILLLKYYGvLPETVLY 251
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  313 ATLLPATY-----NSMINPIIYAFRNQEIQRA 339
Cdd:cd15096 252 VVIQILSNclaygNSCVNPILYAFLSQNFRKA 283
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
75-347 5.81e-10

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 59.58  E-value: 5.81e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGT-----VIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLV 149
Cdd:cd15299   1 WQVVLIAFLTgilalVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 A----SFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACsvvrPLARS 225
Cdd:cd15299  81 SidyvASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQYFVGKRTV----PPDEC 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 HVALLS----------AAFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPF 295
Cdd:cd15299 157 FIQFLSepiitfgtaiAAFYLPVTIMTILYWRIYKETIKE-------------------KKAAQTLSAILLAFIITWTPY 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 4885341  296 AIYCVVGSHEDPAVytyatllPATY----------NSMINPIIYAFRNQEIQRAL-WLLLCGC 347
Cdd:cd15299 218 NIMVLVNTFCDSCI-------PKTYwnlgywlcyiNSTVNPVCYALCNKTFRTTFkMLLLCQC 273
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
84-338 6.01e-10

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 59.45  E-value: 6.01e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   84 TVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHF----VFQY--LVPSETVSLLTVGFLVASfaASVS 157
Cdd:cd15301  12 LVTVGGNVMVMISFKIDKQLQTISNYFLFSLAVADFAIGVISMPLFtvytALGYwpLGYEVCDTWLAIDYLASN--ASVL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  158 SLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCL-----AERAACSVVRPLARSHVALLS- 231
Cdd:cd15301  90 NLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAWIISLLLWPPWIYSWPYIegkrtVPAGTCYIQFLETNPYVTFGTa 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 -AAFFMVFGIMLHLYVRIcqvvWRHAHQIALQQHclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVY 310
Cdd:cd15301 170 lAAFYVPVTIMCILYWRI----WRETKKRQKKQE----------SKAAKTLSAILLAFIVTWTPYNVLVLIKAFFPCSDT 235
                       250       260       270
                ....*....|....*....|....*....|...
gi 4885341  311 TYATLLPATY-----NSMINPIIYAFRNQEIQR 338
Cdd:cd15301 236 IPTELWDFSYylcyiNSTINPLCYALCNAAFRR 268
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
90-339 6.19e-10

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 59.48  E-value: 6.19e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLI-LHFVFQYLVPSETVSLLTVGFLVASFA-ASVSSLLAITVDRY 167
Cdd:cd15071  18 NVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIpLAIIINIGPQTEFYSCLMVACPVLILTqSSILALLAIAVDRY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  168 LSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCL-----AERAACSVVRPLARSHVALLSAAFFMVFG--- 239
Cdd:cd15071  98 LRVKIPTRYKSVVTPRRAAVAIAGCWILSFLVGLTPMFGWNNLnaverAWAANSSMGELVIKCQFETVISMEYMVYFnff 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  240 --------IMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIY-CVV---GSHEDP 307
Cdd:cd15071 178 vwvlppllLMLLIYLEVFYLIRKQLNKKVSSSSSDPQKYYGKELKIAKSLALILFLFALSWLPLHILnCITlfcPSCKKP 257
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  308 AVYTYATLLPATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15071 258 MILTYIAIFLTHGNSAMNPIVYAFRIKKFRTT 289
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
90-340 1.08e-09

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 58.41  E-value: 1.08e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15323  18 NVLVVIAVLTSRALRAPQNLFLVSLASADILVAT-LVMPFslaneLMGYWYFGQVWCNIYLALDVLFCTSSIVHLCAISL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLS--AAFFMVFGIML 242
Cdd:cd15323  97 DRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISFPPLISMYRDPEGDVYPQCKLNDETWYILSSciGSFFAPCLIMI 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HLYVRICQVVwrhahqialqqhclapphLAATRKGVGTLAVVLGTFGASWLPFAI-YCVVGSHEDPAVYTyATLLPATY- 320
Cdd:cd15323 177 LVYIRIYRVA------------------KAREKRFTFVLAVVMGVFVVCWFPFFFsYSLYGICREACEVP-EPLFKFFFw 237
                       250       260
                ....*....|....*....|....
gi 4885341  321 ----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15323 238 igycNSSLNPVIYTIFNQDFRRSF 261
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
78-340 1.08e-09

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 58.66  E-value: 1.08e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLI----LHFVFQYLVPSETVSLLTVGFLVASFA 153
Cdd:cd15054   6 FLCLIILLTVAGNSLLILLIFTQRSLRNTSNYFLVSLFMSDLMVGLVVMppamLNALYGRWVLARDFCPIWYAFDVMCCS 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGWNCLA-ERAACSVVRPLARSHVALLS 231
Cdd:cd15054  86 ASILNLCVISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASFLpIELGWHELGhERTLPNLTSGTVEGQCRLLV 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRICQVVWRHAHQIalqqhclapphLAATR--KGVGTLAVVLGTFGASWLPFAIYCVVGSHED--- 306
Cdd:cd15054 166 SLPYALVASCLTFFLPSGAICFTYCRIL-----------LAARKalKASLTLGILLGMFFVTWLPFFVANVVQAVCDcvs 234
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  307 PAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15054 235 PGLFDVLTWL-GYCNSTMNPIIYPLFMRDFKRAL 267
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
90-340 1.58e-09

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 57.98  E-value: 1.58e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAgCGLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15325  18 NILVILSVACHRHLQTVTHYFIVNLAVADLLL-TSTVLPFsaifeILGYWAFGRVFCNIWAAVDVLCCTASIMSLCIISI 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLA--ERAACSVVRplaRSHVALLSA--AFFMVFGI 240
Cdd:cd15325  97 DRYIGVSYPLRYPSIMTERRGLLALLCVWVLSLVISIGPLFGWKEPApeDETICQITE---EPGYALFSAlgSFYLPLAI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  241 MLHLYVRICQVVWRHAHQialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEdPAVYTYATLLPATY 320
Cdd:cd15325 174 ILVMYCRVYVVALKFSRE----------------KKAAKTLGIVVGCFVLCWLPFFLVMPIGSIF-PAYKPSDTVFKITF 236
                       250       260
                ....*....|....*....|....*
gi 4885341  321 -----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15325 237 wlgyfNSCINPIIYPCSSQEFKKAF 261
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
90-340 3.23e-09

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 57.24  E-value: 3.23e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15321  24 NVLVIIAVLTSRSLRAPQNLFLVSLAAADILVAT-LIIPFslaneLMGYWYFRKTWCEIYLALDVLFCTSSIVHLCAISL 102
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA---AFFMVFGIM 241
Cdd:cd15321 103 DRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISLPPLIYKGKQKDEQGGLPQCKLNEEAWYILSSsigSFFAPCLIM 182
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRIcqvvwrhaHQIALQQHclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGshedpAVYTYATLLPATY- 320
Cdd:cd15321 183 ILVYLRI--------YLIAKNRE----------KRFTFVLAVVIGVFVLCWFPFFFSYSLG-----AICPELCKVPHSLf 239
                       250       260
                ....*....|....*....|....*....
gi 4885341  321 ---------NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15321 240 qfffwigycNSSLNPVIYTIFNQDFRRAF 268
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
90-340 3.24e-09

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 57.13  E-value: 3.24e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSETVSLLTVG-----FLVASFAASVSSLLAITV 164
Cdd:cd15202  18 NVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITL-FNTPFTFVRAVNNTWIFGLFMChfsnfAQYCSVHVSAYTLTAIAV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTyySRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARS-------------HVALLS 231
Cdd:cd15202  97 DRYQAIMHPLK--PRISKTKAKFIIAVIWTLALAFALPHAICSKLETFKYSEDIVRSLCLEdwperadlfwkyyDLALFI 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRICQVVWRhAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYT 311
Cdd:cd15202 175 LQYFLPLLVISFAYARVGIKLWA-SNMPGDATTERYFALRRKKKKVIKMLMVVVVLFALCWLPFNIYVLLLSSKPDYLIK 253
                       250       260       270
                ....*....|....*....|....*....|....*
gi 4885341  312 Y------ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15202 254 TinavyfAFHWLAMSSTCYNPFIYCWLNERFRIEF 288
7tmA_D2_dopamine_R cd15309
D2 subtype of the D2-like family of dopamine receptors, member of the class A family of ...
73-340 3.43e-09

D2 subtype of the D2-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320435 [Multi-domain]  Cd Length: 254  Bit Score: 56.97  E-value: 3.43e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLT----VGFL 148
Cdd:cd15309   1 NYYAMLLTLLIFVIVFGNVLVCMAVSREKALQTTTNYLIVSLAVADLLVATLVMPWVVYLEVVGEWRFSRIHcdifVTLD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  149 VASFAASVSSLLAITVDRYLSLYNALTYYSR-RTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAaCSVVRPLARSHV 227
Cdd:cd15309  81 VMMCTASILNLCAISIDRYTAVAMPMLYNTRySSKRRVTVMISVVWVLSFAISCPLLFGLNNTDQNE-CIIANPAFVVYS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  228 ALLSaaFFMVFGIMLHLYVRICQVvwrhahqialqqhclapphLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED- 306
Cdd:cd15309 160 SIVS--FYVPFIVTLLVYVQIYIV-------------------LQKEKKATQMLAIVLGVFIICWLPFFITHILNMHCDc 218
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  307 ---PAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15309 219 nipPALYSAFTWL-GYVNSAVNPIIYTTFNIEFRKAF 254
7tmA_Beta1_AR cd15958
beta-1 adrenergic receptors (adrenoceptors), member of the class A family of ...
77-329 4.40e-09

beta-1 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-1 adrenergic receptor (beta-1 adrenoceptor), also known as beta-1 AR, is activated by adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320624 [Multi-domain]  Cd Length: 298  Bit Score: 56.83  E-value: 4.40e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGtviageNALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSETVSLLTvGFLVAS 151
Cdd:cd15958  11 VLLIVAG------NVLVIVAIGRTQRLQTLTNLFITSLACADLVMGLlvvpfGATLVVRGRWLYGSFFCELWT-SVDVLC 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGW---------NCLAERAACSVVRP 221
Cdd:cd15958  84 VTASIETLCVIAIDRYLAITSPFRYQSLLTRARAKGIVCTVWAISALVSFLpIMMHWwrdeddqalKCYEDPGCCDFVTN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARShVALLSAAFFMVFGIMLHLYVRI-------------CQVVWRHAHQIALQQHCLAPPHLAATR--KGVGTLAVVLG 286
Cdd:cd15958 164 RAYA-IASSIISFYIPLLIMIFVYLRVyreakkqikkidkCEGRFHNTLTGLGRKCKRRPSRILALReqKALKTLGIIMG 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  287 TFGASWLPFAIYCVVGSHE----DPAVYTYATLLpATYNSMINPIIY 329
Cdd:cd15958 243 VFTLCWLPFFLVNVVNVFNrelvPDWLFVFFNWL-GYANSAFNPIIY 288
7tmA_prokineticin-R cd15204
prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
77-338 4.74e-09

prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Prokineticins 1 (PROK1) and 2 (PROK2), also known as endocrine gland vascular endothelial factor and Bombina varigata 8, respectively, are multifunctional chemokine-like peptides that are highly conserved across species. Prokineticins can bind with similar affinities to two closely homologous 7-transmembrane G protein coupled receptors, PROKR1 and PROKR2, which are phylogenetically related to the tachykinin receptors. Prokineticins and their GPCRs are widely distributed in human tissues and are involved in numerous physiological roles, including gastrointestinal motility, generation of circadian rhythms, neuron migration and survival, pain sensation, angiogenesis, inflammation, and reproduction. Moreover, different point mutations in genes encoding PROK2 or its receptor (PROKR2) can lead to Kallmann syndrome, a disease characterized by delayed or absent puberty and impaired olfactory function.


Pssm-ID: 320332 [Multi-domain]  Cd Length: 288  Bit Score: 56.90  E-value: 4.74e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSE------TVSLLTVGFL-V 149
Cdd:cd15204   5 VVYVLIMLVCGVGNLLLIAVLARYKKLRTLTNLLIANLALSDFLVAV-FCLPFEMDYYVVRQrswthgDVLCAVVNYLrT 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  150 ASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVhlLLAATWTVSLG----LGLLPVLGWNCLAERAACSVVRPLarS 225
Cdd:cd15204  84 VSLYVSTNALLVIAIDRYLVIVHPLKPRMKRRTACV--VIALVWVVSLLlaipSAVYSKTTPYANQGKIFCGQIWPV--D 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 HVALLSAAFFMVFG--------IMLHLYVRICQVVWR------HAHQIALQQHClapphlaaTRKGVGTLAVVLGTFGAS 291
Cdd:cd15204 160 QQAYYKAYYLFLFVlefvlpvlIMTLCYLRIVRKVWFrrvpgqQTEQIRRRLRR--------RRRKVRLLVVILTAFVLC 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 4885341  292 WLPFAIYCVV----------GSHEDPAVYTYATLlpATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15204 232 WAPYYGYAIVrdffptllskEKLNTTIFYIVEAL--AMSNSMINTVVYVAFNNNIRK 286
7tmA_SKR_NK2R cd16004
substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
90-334 5.29e-09

substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The substance-K receptor (SKR), also known as tachykinin receptor 2 (TACR2) or neurokinin A receptor or NK2R, is a G-protein coupled receptor that specifically binds to neurokinin A. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320670 [Multi-domain]  Cd Length: 285  Bit Score: 56.78  E-value: 5.29e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgliLHFVFQYLVPSETVSLLTVGFL-------VASFAASVSSLLAI 162
Cdd:cd16004  18 NATVIWIILAHRRMRTVTNYFIVNLALADLSMAA---FNTAFNFVYASHNDWYFGLEFCrfqnffpITAMFVSIYSMTAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTyySRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE--RAACSVVRP-------LARSHVALLSAA 233
Cdd:cd16004  95 AADRYMAIIHPFK--PRLSAGSTKVVIAGIWLVALALAFPQCFYSTVTMDqgRTKCIVAWPgdsggkhQLTYHLAVIVLI 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  234 FFMVFGIMLHLYVRICQVVWRHA---HQIALQQHclapPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGS-HEDPAV 309
Cdd:cd16004 173 YLLPLAVMFVTYSIIGITLWRSAvpgHQAHGAYH----RQLQAKKKFVKTMVVVVVTFAICWLPYHLYFILGSfNEDIYC 248
                       250       260       270
                ....*....|....*....|....*....|.
gi 4885341  310 YTY------ATLLPATYNSMINPIIYAFRNQ 334
Cdd:cd16004 249 QKYiqqvylAIFWLAMSSTMYNPIIYCCLNQ 279
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
90-340 5.71e-09

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 56.56  E-value: 5.71e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLL--AGCGLILHFV--FQYLVPSETVSLLTVGFLVASFA-ASVSSLLAITV 164
Cdd:cd15337  18 NLLVIYLFSKTKSLRTPSNMFIINLAISDFGfsAVNGFPLKTIssFNKKWIWGKVACELYGFAGGIFGfMSITTLAAISI 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNC-LAERAACSVVRP-LARSHVALLSAAFFMVFGIML 242
Cdd:cd15337  98 DRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGWGRyVPEGFQTSCTFDyLSRDLNNRLFILGLFIFGFLC 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HL------YVRICQVVWRHAHQIALQQHCLAPPHLAATRKG-------VGTLAVVLGTFGASWLPFAIYCVV---GSHEd 306
Cdd:cd15337 178 PLliiifcYVNIIRAVRNHEKEMTQTAKSGMGKDTEKNDARkkaeiriAKVAIILISLFLLSWTPYAVVALLgqfGPAY- 256
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  307 pAVYTYATLLP---ATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15337 257 -WITPYVSELPvmfAKASAIYNPIIYALSHPKFRAAL 292
7tmA_alpha-2D_AR cd15324
alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
77-340 6.51e-09

alpha-2 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320447 [Multi-domain]  Cd Length: 256  Bit Score: 56.03  E-value: 6.51e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAgeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVAS 151
Cdd:cd15324   7 VVVIILVTIVG--NVLVVVAVFTSRALRAPQNLFLVSLASADILVAT-LVIPFslaneVMGYWYFGSTWCAFYLALDVLF 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLG-----WNCLAERAACSVVRPLARSh 226
Cdd:cd15324  84 CTSSIVHLCAISLDRYWSVTKAVSYNLKRTPKRIKRMIAVVWVISAVISFPPLLMtkhdeWECLLNDETWYILSSCTVS- 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 vallsaaFFMVFGIMLHLYVRICQVVWRHAHQIALqqhclapphlaatrkgvgTLAVVLGTFGASWLPF----AIYCVVG 302
Cdd:cd15324 163 -------FFAPGLIMILVYCKIYRVAKMREKRFTF------------------VLAVVMGVFVLCWFPFfftySLHAVCR 217
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 4885341  303 SHEDPAVYTYATLLPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15324 218 KRCGIPDALFNLFFWIGYcNSSVNPIIYTIFNRDFRKAF 256
7tmA_mAChR_GAR-2-like cd15302
muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of ...
75-340 7.06e-09

muscarinic acetylcholine receptor GAR-2 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320429 [Multi-domain]  Cd Length: 266  Bit Score: 55.90  E-value: 7.06e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSETVSL--------LTVG 146
Cdd:cd15302   4 ALITAILSIITVIG-NILVLLSFYVDRNIRQPSNYFIASLAVSDLLIGL-ESMPFYTVYVLNGDYWPLgwvlcdlwLSVD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  147 FLVAsfAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERaacSVVRPLARSH 226
Cdd:cd15302  82 YTVC--LVSIYTVLLITIDRYCSVKIPAKYRNWRTPRKVLLIIAITWIIPALLFFISIFGWQYFTGQ---GRSLPEGECY 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 VALLSAAFF-MVFGI---------MLHLYVRICQVVWRhahqialqqhclapphlaaTRKGVGTLAVVLGTFGASWLPFA 296
Cdd:cd15302 157 VQFMTDPYFnMGMYIgyywttlivMLILYAGIYRAANR-------------------ARKALRTITFILGAFVICWTPYH 217
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 4885341  297 I------YCVVGSHEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15302 218 IlatiygFCEAPPCVNETLYTISYYL-CYMNSPINPFCYALANQQFKKTF 266
7tmA_TAAR6_8_9 cd15316
trace amine-associated receptors 6, 8, and 9, member of the class A family of ...
87-340 1.35e-08

trace amine-associated receptors 6, 8, and 9, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320439 [Multi-domain]  Cd Length: 290  Bit Score: 55.25  E-value: 1.35e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   87 AGENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPS-----ETVSLLTVGFLVASFAASVSSLLA 161
Cdd:cd15316  15 VFGNLLVMISILHFKQLHSPTNFLIASLACADFLVGV-TVMPFSTVRSVEScwyfgESFCTFHTCCDVSFCYASLFHLCF 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  162 ITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGW----------NCLAERAACSVvrPLARSHVALLS 231
Cdd:cd15316  94 ISVDRYIAVTDPLVYPTKFTVSVSGICISVSWIFSLTYSFSVFYTGvnddgleelvNALNCVGGCQI--ILNQNWVLVDF 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAAT-------RKGVGTLAVVLGTFGASWLPFAIYCVVGSH 304
Cdd:cd15316 172 LLFFIPTFAMIILYGKIFLVAKQQARKIEMTSSKAESSSESYKdrvarreRKAAKTLGITVIAFLVSWLPYLIDVLIDAF 251
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 4885341  305 ED---PAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15316 252 MNfitPPYIYEICCWCAYYNSAMNPLIYALFYPWFRKAI 290
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
154-339 1.54e-08

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 55.07  E-value: 1.54e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGWNCLAERAACSVVRPLARSHV----- 227
Cdd:cd15066  85 ASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLpIFLGWYTTEEHLQYRKTHPDQCEFVvnkiy 164
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  228 ALLSAA--FFMVFGIMLHLYVRIcqvvwrhaHQIALQQHclapphlaatrKGVGTLAVVLGTFGASWLPFAIYCVVGSHE 305
Cdd:cd15066 165 ALISSSvsFWIPCIVMIFTYYRI--------YLEAKREH-----------KAAKTLGIIMGAFILCWLPFFLWYVTTTLC 225
                       170       180       190
                ....*....|....*....|....*....|....*....
gi 4885341  306 DPAVYTYATLLPATY-----NSMINPIIYAFRNQEIQRA 339
Cdd:cd15066 226 GDACPYPPILVSILFwigyfNSTLNPLIYAYFNRDFREA 264
7tmA_mAChR_M2 cd15297
muscarinic acetylcholine receptor subtype M2, member of the class A family of ...
90-333 2.76e-08

muscarinic acetylcholine receptor subtype M2, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of M2 receptor causes a decrease in cAMP production, generally leading to inhibitory-type effects. This causes an outward current of potassium in the heart, resulting in a decreased heart rate. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320424 [Multi-domain]  Cd Length: 262  Bit Score: 54.20  E-value: 2.76e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAG-CGLILHFVFQY-----LVPSETVSLLTVGFLVASfaASVSSLLAIT 163
Cdd:cd15297  18 NILVMVSIKVNRHLQTVNNYFLFSLACADLIIGvFSMNLYTLYTVigywpLGPVVCDLWLALDYVVSN--ASVMNLLIIS 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  164 VDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLA-----ERAACSV---VRPLARSHVALlsAAFF 235
Cdd:cd15297  96 FDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVggrtvPEGECYIqffSNAAVTFGTAI--AAFY 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDP----AVYT 311
Cdd:cd15297 174 LPVIIMTVLYWQISRASSRE-------------------KKVTRTILAILLAFIITWTPYNVMVLINTFCAScipnTVWT 234
                       250       260
                ....*....|....*....|..
gi 4885341  312 YATLLpATYNSMINPIIYAFRN 333
Cdd:cd15297 235 IGYWL-CYINSTINPACYALCN 255
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
90-339 4.02e-08

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 54.01  E-value: 4.02e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLlagCGLILHFVFQ---YLVPSETVSLLTVGFL----VASFAASVSSLLAI 162
Cdd:cd14971  18 NSLVILVVARNKPMRSTTNLFILNLAVADL---TFLLFCVPFTatiYPLPGWVFGDFMCKFVhyfqQVSMHASIFTLVAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTYYSRRT----LLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSAAFFMVF 238
Cdd:cd14971  95 SLDRFLAVVYPLRSLHIRTprnaLAASGCIWVVSLAVAAPVLALHRLRNYTPGNRTVCSEAWPSRAHRRAFALCTFLFGY 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRICQVVWRHAHQIALQQHCLAPPHlAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHeDPAVYTYATLLPA 318
Cdd:cd14971 175 LLPLLLICVCYAAMLRHLWRVAVRPVLSEGSR-RAKRKVTRLVLVVVVLFAACWGPIHAILLLVAL-GPFPLTYATYALR 252
                       250       260
                ....*....|....*....|....*...
gi 4885341  319 TY-------NSMINPIIYAFRNQEIQRA 339
Cdd:cd14971 253 IWahclaysNSAVNPVLYAFLSEHFRKA 280
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
90-340 4.14e-08

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 53.76  E-value: 4.14e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15327  18 NILVILSVACNRHLQTVTNYFIVNLAIADLLLST-TVLPFsatleVLGFWAFGRVFCDIWAAVDVLCCTASILSLCVISV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN--CLAERAACSVVRplaRSHVALLSA--AFFMVFGI 240
Cdd:cd15327  97 DRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISIGPLLGWKepPPPDESICSITE---EPGYALFSSlfSFYLPLMV 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  241 MLHLYVRICQVVWRHAHQialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGS---HEDPAVYTYATLLP 317
Cdd:cd15327 174 ILVMYFRVYVVALKFSRE----------------KKAAKTLAIVVGVFILCWFPFFFVLPLGSffpALKPSEMVFKVIFW 237
                       250       260
                ....*....|....*....|....
gi 4885341  318 ATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15327 238 LGYfNSCVNPIIYPCSSKEFKRAF 261
7tmA_5-HT1E cd15335
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G ...
90-340 4.28e-08

serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320457 [Multi-domain]  Cd Length: 258  Bit Score: 53.77  E-value: 4.28e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSEtvslLTVGFLVASFAASVS---------SLL 160
Cdd:cd15335  18 NSAVIAAICTTKKLHQPANYLICSLAVTDFLVAV-LVMPLSITYIVMDT----WTLGYFICEIWLSVDmtcctcsilHLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN--CLAERAACSVVRPLARSHVALLSAAFFMVF 238
Cdd:cd15335  93 VIALDRYWAITDAIEYARKRTAKRAGLMILTVWTISIFISIPPLFWRNhhDANIPSQCIIQHDHVIYTIYSTFGAFYIPL 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIY-CVVG---SHEDPAVYTYAT 314
Cdd:cd15335 173 TLILILYYRIYHAASRE-------------------RKAARILGLILGAFILSWLPFFIKeLIVGlsvMTVSPEVADFLT 233
                       250       260
                ....*....|....*....|....*.
gi 4885341  315 LLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15335 234 WL-GYVNSLVNPLLYTSFNEDFKLAF 258
7tmA_alpha2A_AR cd15322
alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
90-340 4.29e-08

alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320445 [Multi-domain]  Cd Length: 259  Bit Score: 53.79  E-value: 4.29e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHF-----VFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15322  18 NVLVIIAVFTSRALKAPQNLFLVSLASADILVAT-LVIPFslaneVMGYWYFGKVWCEIYLALDVLFCTSSIVHLCAISL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGwnclAERAACSVVRPLARSH------VALLSAAFFMVF 238
Cdd:cd15322  97 DRYWSITQAIEYNLKRTPRRIKCIIFIVWVISAVISFPPLIT----IEKKSGQPEGPICKINdekwyiISSCIGSFFAPC 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  239 GIMLHLYVRIcqvvwrhaHQIALQQHclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDpaVYTYATLLPA 318
Cdd:cd15322 173 LIMVLVYIRI--------YQIAKNRE----------KRFTFVLAVVIGVFVICWFPFFFTYTLTAVCD--CSVPETLFKF 232
                       250       260
                ....*....|....*....|....*..
gi 4885341  319 TY-----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15322 233 FFwfgycNSSLNPVIYTIFNHDFRRAF 259
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
90-340 4.48e-08

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 53.43  E-value: 4.48e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGcGLILHFVFQYLVPSE----TVSL-LTVGFLVASFAASVSSLLAITV 164
Cdd:cd17790  18 NLLVLISFKVNSELKTVNNYFLLSLACADLIIG-AFSMNLYTTYILMGHwalgTVACdLWLALDYVASNASVMNLLIISF 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCL-AERAAcsvvrPLARSHVALLS----------AA 233
Cdd:cd17790  97 DRYFSITRPLTYRAKRTPRRAAIMIGLAWLISFVLWAPAILFWQYLvGERTV-----LAGQCYIQFLSqpiitfgtaiAA 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  234 FFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTya 313
Cdd:cd17790 172 FYLPVTIMIILYWRIYRETIKE-------------------KKAARTLSAILLAFILTWTPYNIMVLVSTFCKDCVPK-- 230
                       250       260       270
                ....*....|....*....|....*....|..
gi 4885341  314 TLLPATY-----NSMINPIIYAFRNQEIQRAL 340
Cdd:cd17790 231 TLWELGYwlcyvNSTVNPMCYALCNKSFRDTF 262
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
85-337 7.34e-08

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 52.92  E-value: 7.34e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   85 VIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQ-------YLVPSETVSLLTVGFLVASfaASVS 157
Cdd:cd15308  13 AIIAGNVLVCLSVCTERALKTTTNYFIVSLAVADLLLALLVLPLYVYSefqggvwTLSPVLCDALMTMDVMLCT--ASIF 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  158 SLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAAcSVVRPLARSHVALLS-AAFFM 236
Cdd:cd15308  91 NLCAISVDRFIAVSVPLNYNRRQGSVRQLLLISATWILSFAVASPVIFGLNNVPNRDP-AVCKLEDNNYVVYSSvCSFFI 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  237 VFGIMLHLYvricqvvwrhahqialqqhCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVG----SHEDPAVYTY 312
Cdd:cd15308 170 PCPVMLVLY-------------------CAMFRGLGRERKAMRVLPVVVGAFLFCWTPFFVVHITRalceSCSIPPQLIS 230
                       250       260
                ....*....|....*....|....*
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQ 337
Cdd:cd15308 231 IVTWLGYVNSALNPVIYTVFNAEFR 255
7tmA_Beta2_AR cd15957
beta-2 adrenergic receptors (adrenoceptors), member of the class A family of ...
85-329 8.86e-08

beta-2 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; Beta-2 AR is activated by adrenaline that plays important roles in cardiac function and pulmonary physiology. While beta-1 AR and beta-2 AR are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway, beta-2 AR can couple to both G(s) and G(i) proteins in the heart. Moreover, beta-2 AR activation leads to smooth muscle relaxation and bronchodilation in the lung. The beta adrenergic receptors are a subfamily of the class A rhodopsin-like G protein-coupled receptors.


Pssm-ID: 341355 [Multi-domain]  Cd Length: 301  Bit Score: 52.94  E-value: 8.86e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   85 VIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFL----VASFAASVSSLL 160
Cdd:cd15957  13 AIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILLKTWTFGNFWCEFWtsidVLCVTASIETLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGW---------NCLAERAACSVVRPLARShVALL 230
Cdd:cd15957  93 VIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLpIQMHWyrathqeaiNCYAEETCCDFFTNQAYA-IASS 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 SAAFFMVFGIMLHLYVRICQVVWRHAHQI------------------ALQQHCLAPPHLAATRKGVGTLAVVLGTFGASW 292
Cdd:cd15957 172 IVSFYVPLVIMVFVYSRVFQEAKRQLQKIdksegrfhnqnidqngsgGGGGNRRRSKFCLKEHKALKTLGIIMGTFTLCW 251
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 4885341  293 LPFAIYCVVGSHEDPAVYT--YATLLPATY-NSMINPIIY 329
Cdd:cd15957 252 LPFFIVNIVHVIQDNLIRKevYILLNWIGYvNSGFNPLIY 291
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
75-339 1.27e-07

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 52.27  E-value: 1.27e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTViagENALVVALIASTPALRTPMFVLVGSLATADLLAGCGL----ILHFVFQYLVPSETVSLLTVGFLVA 150
Cdd:cd15210   6 WGIVFMVVGVP---GNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNlplaASTFLHQAWIHGETLCRVFPLLRYG 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYL-----SLYNALtyYSRRtllGVHLLLAATWTVSLGLGL-LPVLGWNCLA---ERAACSVVRP 221
Cdd:cd15210  83 LVAVSLLTLVLITLNRYIliahpSLYPRI--YTRR---GLALMIAGTWIFSFGSFLpLWLGIWGRFGldpKVCSCSILRD 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARSHvallSAAFFMVFGIMLHLYVRIcqVVWRHAHQIALQQHCLapphlaatrkgvgtlaVVLGTFGASWLPFAIYCVV 301
Cdd:cd15210 158 KKGRS----PKTFLFVFGFVLPCLVII--ICYARREDRRLTRMML----------------VIFLCFLVCYLPITLVNVF 215
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 4885341  302 GSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15210 216 DDEVAPPVLHIIAYVLIWLSSCINPIIYVAMNRQYRQA 253
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
90-339 1.77e-07

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 51.66  E-value: 1.77e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGcGLILHFVFQYLVPSEtvslLTVGFLVASF---------AASVSSLL 160
Cdd:cd15050  18 NLLVLYAVRTERKLHTVGNLYIVSLSVADLIVG-AVVMPLNIVYLLESK----WILGRPVCLFwlsmdyvasTASIFSLF 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSlGLGLLPVLGWNCLAEraACSVVRPLARSHVALLSAAFFMVFGI 240
Cdd:cd15050  93 ILCIDRYRSVQQPLKYLKYRTKTRASLMISGAWLLS-FLWVIPILGWHHFAR--GGERVVLEDKCETDFHDVTWFKVLTA 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  241 MLHLYVRICQVVWRHAH-QIALQQHclapphlaatRKGVGTLAVVLGTFGASWLP-FAIYCVVGSHED--PAVYTYATLL 316
Cdd:cd15050 170 ILNFYIPSLLMLWFYAKiFKAVNRE----------RKAAKQLGFIMAAFILCWIPyFILFMVIAFCKNccNENLHMFTIW 239
                       250       260
                ....*....|....*....|...
gi 4885341  317 PATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15050 240 LGYINSTLNPFIYPLCNENFKKT 262
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
88-333 1.86e-07

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 51.98  E-value: 1.86e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   88 GENALVVALIASTPALRTPMFVLVGSLATADLLAG--C---GLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAI 162
Cdd:cd15392  16 GGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAvfCvpfSFIALLILQYWPFGEFMCPVVNYLQAVSVFVSAFTLVAI 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTyySRRTLLGVHLLLAATWTVSLGLGLLPVLGwNCLAERAACSVVRPLARSH-----------VALLS 231
Cdd:cd15392  96 SIDRYVAIMWPLR--PRMTKRQALLLIAVIWIFALATALPIAIT-SRLFEDSNASCGQYICTESwpsdtnryiysLVLMI 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRICQVVWRH-----AHQIALQQHClapphlAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED 306
Cdd:cd15392 173 LQYFVPLAVLVFTYTRIGIVVWAKrtpgeAENNRDQRMA------ESKRKLVKMMITVVAIFALCWLPLNILNLVGDHDE 246
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  307 PAVYT-------YATLLPATYNSMINPIIYAFRN 333
Cdd:cd15392 247 SIYSWpyipylwLAAHWLAMSHCCYNPFIYCWMN 280
7tmA_mAChR_M5 cd15300
muscarinic acetylcholine receptor subtype M5, member of the class A family of ...
81-340 2.99e-07

muscarinic acetylcholine receptor subtype M5, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. M5 mAChR is primarily found in the central nervous system and mediates acetylcholine-induced dilation of cerebral blood vessels. Activation of M5 receptor triggers a variety of cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides, and modulation of potassium channels. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320427 [Multi-domain]  Cd Length: 262  Bit Score: 51.18  E-value: 2.99e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   81 VSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVA----SFAASV 156
Cdd:cd15300  10 VSLITIVG-NVLVMISFKVNSQLKTVNNYYLLSLACADLIIGIFSMNLYTSYILMGYWALGSLACDLWLAldyvASNASV 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  157 SSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACsvvrPLARSHVALLS----- 231
Cdd:cd15300  89 MNLLVISFDRYFSITRPLTYRAKRTPKRAGIMIGLAWLISFILWAPPILCWQYFVGKRTV----PERECQIQFLSeptit 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 -----AAFFMVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED 306
Cdd:cd15300 165 fgtaiAAFYIPVSVMTILYCRIYKETIKE-------------------RKAAQTLSAILLAFIITWTPYNIMVLVSTFCS 225
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  307 ---PAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15300 226 dciPLTLWHLGYWLCYVNSTVNPMCYALCNKTFRKTF 262
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
77-330 7.81e-07

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 49.88  E-value: 7.81e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAgcgLILHFVFQYLVPSETVSLLTVGFLVASFAASV 156
Cdd:cd15079   5 FIYIFLGIVSLLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFLM---MIKMPIFIYNSFYEGWALGPLGCQIYAFLGSL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  157 S------SLLAITVDRYLSLYNALTyYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGWNCLAER---AACSV--VRP--L 222
Cdd:cd15079  82 SgigsiwTNAAIAYDRYNVIVKPLN-GNPLTRGKALLLILFIWLYALPWALLpLLFGWGRYVPEgflTSCSFdyLTRdwN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  223 ARSHVALLS-AAFFMVFGIMLHLYVRICQVVWRHAHQIALQQhclAPPHLAATRKGVGT--------LA-VVLGTFG--- 289
Cdd:cd15079 161 TRSFVATIFvFAYVIPLIIIIYCYSFIVKAVFAHEKALREQA---KKMNVVSLRSNADAnkqsaeirIAkVALTNVFlwf 237
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 4885341  290 ASWLPFAIYCVVGSHEDPAVYT-YATLLPATY---NSMINPIIYA 330
Cdd:cd15079 238 IAWTPYAVVALIGAFGNQSLLTpLVSMIPALFaktAACYNPIVYA 282
7tmA_Histamine_H4R cd15295
histamine receptor subtype H4R, member of the class A family of seven-transmembrane G ...
143-345 7.94e-07

histamine receptor subtype H4R, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine subtype H4R, a member of the histamine receptor family, which belong to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H3 and H4 receptors couple to the G(i)-proteins, which leading to the inhibition of cAMP formation. The H3R receptor functions as a presynaptic autoreceptors controlling histamine release and synthesis. The H4R plays an important role in histamine-mediated chemotaxis in mast cells and eosinophils. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320422 [Multi-domain]  Cd Length: 267  Bit Score: 49.82  E-value: 7.94e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  143 LTVGFLVASfaASVSSLLAITVDRYLSLYNALTYYSRRT-LLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRP 221
Cdd:cd15295  77 LVIDYLLCT--ASVYNIVLISYDRYQSVSNAVSYRNQQTaTLRIVTQMVAVWVLAFLVHGPAILVSDSWKTEDGECEPEF 154
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARSHVALLSAAFFMVFGIMLHLYVRICqvVWRHAHQialqqhclappHLAAtRKGVGTLAVVLGTFGASWLPFAIYCVV 301
Cdd:cd15295 155 FSNWYILAITSVLEFLVPVILVAYFNTQ--IYWSLWK-----------RLRD-RKLAKSLAIILGTFAICWAPYSLFTII 220
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  302 ----GSHEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRALWLLLC 345
Cdd:cd15295 221 raacEKHRGSPWYNFAFWL-QWFNSFINPFLYPLCHKRFRKAFLKIFC 267
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
90-340 1.14e-06

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 49.36  E-value: 1.14e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLIL----HFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15012  17 NLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLqnlsIYLIPSWPFGEVLCRMYQFVHSLSYTASIGILVVISVE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL--------LPVLGWNCLAERAACsvVRPLARSHVALLSAAFFMV 237
Cdd:cd15012  97 RYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTpyfvfsqtVEILVTQDGQEEEIC--VLDREMFNSKLYDTINFIV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  238 -----FGIMLHLYVRICQVVWRHAHQIAlqqhclapphlaatRKGVGTLAV-VLGTFGASWLPFAIYCVVGSHEDP---- 307
Cdd:cd15012 175 wylipLLIMTVLYSKISIVLWKSSSIEA--------------RRKVVRLLVaVVVSFALCNLPYHARKMWQYWSEPyrcd 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  308 ----AVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15012 241 snwnALLTPLTFLVLYFNSAVNPLLYAFLSKRFRQSM 277
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
78-340 2.08e-06

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 48.77  E-value: 2.08e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGtviageNALVVALIASTPALR--TPMFVLvgSLATADLLAG--C-------GLILHFVFqylvpSETVSLLTVG 146
Cdd:cd15207  12 LLCVVG------NVLVCLVVAKNPRMRtvTNYFIL--NLAVSDLLVGvfCmpftlvdNILTGWPF-----GDVMCKLSPL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  147 FLVASFAASVSSLLAITVDRYLSLYNALT-YYSRRTLLGVhllLAATWTVSLGLGL-------LPVLGWNCLAERAACSV 218
Cdd:cd15207  79 VQGVSVAASVFTLVAIAVDRYRAVVHPTEpKLTNRQAFVI---IVAIWVLALAIMIpqalvleVKEYQFFRGQTVHICVE 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  219 VRPlARSHVALLSAAFFMV-----FGIMLHLYVRICQVVW-RHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASW 292
Cdd:cd15207 156 FWP-SDEYRKAYTTSLFVLcyvapLLIIAVLYVRIGYRLWfKPVPGGGSASREAQAAVSKKKVRVIKMLIVVVVLFALSW 234
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 4885341  293 LPFAIYCVVGSHEDPAVYTYATLLPATY---------NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15207 235 LPLHTVTMLDDFGNLSPNQREVLYVYIYpiahwlayfNSCVNPIVYGYFNRNFRKGF 291
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
90-339 2.16e-06

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 48.54  E-value: 2.16e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAG--C-------GLILHFVFqylvpSETVSLLTVGFLVASFAASVSSLL 160
Cdd:cd15206  18 NILVIVTLVQNKRMRTVTNVFLLNLAVSDLLLAvfCmpftlvgQLLRNFIF-----GEVMCKLIPYFQAVSVSVSTFTLV 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  161 AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE----RAACSVVRPLARS----HVALLSA 232
Cdd:cd15206  93 AISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMSPILVFSNLIPMsrpgGHKCREVWPNEIAeqawYVFLDLM 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWrhahqialqqhclapphlAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTY 312
Cdd:cd15206 173 LLVIPGLVMSVAYGLISWTLL------------------EAKKRVIRMLFVIVVEFFICWTPLYVINTWKAFDPPSAARY 234
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  313 AT-------LLPATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15206 235 VSsttisliQLLAYISSCVNPITYCFMNKRFRQA 268
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
90-331 3.05e-06

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 48.14  E-value: 3.05e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAG-----CGLILHFVFQYLVPsETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd14986  18 NGLVILVLRRKRKKRSRVNIFILNLAIADLVVAfftvlTQIIWEATGEWVAG-DVLCRIVKYLQVVGLFASTYILVSMSL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLlgVHLLLAATWTVSLGLGLLPVLGWncLAERAACSVvrPLARSH-----------VALLSAA 233
Cdd:cd14986  97 DRYQAIVKPMSSLKPRKR--ARLMIVVAWVLSFLFSIPQLVIF--VERELGDGV--HQCWSSfytpwqrkvyiTWLATYV 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  234 FFMVFGIMLHLYVRICQVVWR-----HAHQIALQ-QHCLAPPHLAATRKGVG---------TLAVVLGtFGASWLPF--- 295
Cdd:cd14986 171 FVIPLIILSYCYGRILRTIWIrsrqkTDRPIAPTaMSCRSVSCVSSRVSLISrakiktikmTLVIILA-FILCWTPYfiv 249
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 4885341  296 AIYCVVG--SHEDPAVYTYATLLpATYNSMINPIIYAF 331
Cdd:cd14986 250 QLLDVYAgmQQLENDAYVVSETL-ASLNSALNPLIYGF 286
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
90-340 5.07e-06

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 47.69  E-value: 5.07e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALR---TPMFVLvgSLATADLLAGCglilhFVFQYLVPSETVSL--------LTVGFLVASFAASVSS 158
Cdd:cd15320  19 NTLVCAAVIRFRHLRskvTNFFVI--SLAVSDLLVAV-----LVMPWKAVAEIAGFwpfgsfcnIWVAFDIMCSTASILN 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLL-PVLGWN-----CLAERAACSVVRP-------LARS 225
Cdd:cd15320  92 LCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISFIpVQLNWHkakptSFLDLNASLRDLTmdncdssLNRT 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 HVALLSA-AFFMVFGIMLHLYVRICQVVWRHAHQIALQQH-------------------CLAPP-----HLAATRKGVGT 280
Cdd:cd15320 172 YAISSSLiSFYIPVAIMIVTYTRIYRIAQKQIRRISALERaavhakncqnstgnrgsgdCQQPEssfkmSFKRETKVLKT 251
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 4885341  281 LAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYATLLPATY---------NSMINPIIYAFrNQEIQRAL 340
Cdd:cd15320 252 LSVIMGVFVCCWLPFFILNCMVPFCKPTSTEPFCISSTTFdvfvwfgwaNSSLNPIIYAF-NADFRKAF 319
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
90-340 7.58e-06

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 46.84  E-value: 7.58e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSETVSLLTVGFLVASFAASVsSLLAITV 164
Cdd:cd15196  18 NSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALfnvlpQLIWDITYRFYGGDLLCRLVKYLQVVGMYASSY-VLVATAI 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLgVHLLLAATWTVSLGLGLLPVLGWNCLAERAA---CSVVRPLARSHVALLSAAFFMVFG-- 239
Cdd:cd15196  97 DRYIAICHPLSSHRWTSRR-VHLMVAIAWVLSLLLSIPQLFIFSYQEVGSGvydCWATFEPPWGLRAYITWFTVAVFVvp 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  240 --IMLHLYVRICQVVWRhahqialqqhclapphlaATRKGVG-TLAVVLgTFGASWLPF------AIYCVVGSHEDPAVy 310
Cdd:cd15196 176 liILAFCYGRICYVVWR------------------AKIKTVKlTLVVVA-CYIVCWTPFfvvqmwAAWDPTAPIEGPAF- 235
                       250       260       270
                ....*....|....*....|....*....|
gi 4885341  311 TYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15196 236 VIIMLL-ASLNSCTNPWIYLAFSGNLRRAL 264
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
90-331 8.13e-06

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 46.90  E-value: 8.13e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILhFVFQYLVPSETVSLLTVGFLVASFA----ASVSSLLAITVD 165
Cdd:cd14970  18 NSLVIYVILRYSKMKTVTNIYILNLAVADELFLLGLPF-LATSYLLGYWPFGEVMCKIVLSVDAynmfTSIFCLTVMSVD 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERA---ACSVVRPLARSHVALLSAAFFMVFGIML 242
Cdd:cd14970  97 RYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVIIFARTLQEEGgtiSCNLQWPDPPDYWGRVFTIYTFVLGFAV 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HLYVrICQVVWRHAHQIALQqhclAPPHLA-------ATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDP-----AVY 310
Cdd:cd14970 177 PLLV-ITVCYSLIIRRLRSS----RNLSTSgarekrrARRKVTRLVLVVVAVFVVCWLPFHVFQIVRLLIDPpetltVVG 251
                       250       260
                ....*....|....*....|..
gi 4885341  311 TYATLLPATY-NSMINPIIYAF 331
Cdd:cd14970 252 VFLFCIALSYaNSCLNPILYAF 273
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
78-340 1.27e-05

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 46.27  E-value: 1.27e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLlagcGLILhfvFQYlvPSETVSLLTV------------ 145
Cdd:cd15073   6 YLIVAGIISTISNGIVLVTFVKFRELRTPTNALIINLAVTDL----GVSI---IGY--PFSAASDLHGswkfgyagcqwy 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  146 GFLVASFA-ASVSSLLAITVDRYL-----SLYNALTYysrRTLLGVHLLLaatWTVSLGLGLLPVLGWNCLAER---AAC 216
Cdd:cd15073  77 AFLNIFFGmASIGLLTVVAVDRYLticrpDLGRKMTT---NTYTVMILLA---WTNAFFWAAMPLVGWASYALDptgATC 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  217 SVV-RPLARSHVALLSAAF---FMV-FGIMLHLYVRICQVVWRHahqiaLQQHCLAPPHLAAT-RKGVGTLAVVL-GTFG 289
Cdd:cd15073 151 TINwRKNDSSFVSYTMSVIvvnFIVpLAVMFYCYYNVSRFVKKV-----LASDCLESVNIDWTdQNDVTKMSVIMiVMFL 225
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 4885341  290 ASWLPFAIYCVVGSHEDPA-VYTYATLLP---ATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15073 226 VAWSPYSIVCLWASFGEPKkIPPWMAIIPplfAKSSTFYNPCIYVIANKKFRRAI 280
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
92-340 1.57e-05

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 46.10  E-value: 1.57e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   92 LVVALIASTPAL---------RTPMFVLVGSLATADLLAGCGL----ILHFVFQYLVPSETVSLLTVGFLVASFAASVSS 158
Cdd:cd14982  11 FILGLLGNILALwvflrkmkkRSPTTIYMINLALADLLFVLTLpfriYYYLNGGWWPFGDFLCRLTGLLFYINMYGSILF 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLG---LLPVLGWNCLAERAACSVVRP--LARSHVALLSA- 232
Cdd:cd14982  91 LTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASvplLLLRSTIAKENNSTTCFEFLSewLASAAPIVLIAl 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 --AFFMVFGIMLHLYVRICQvvwrhahqiALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPF----AIYCVV----- 301
Cdd:cd14982 171 vvGFLIPLLIILVCYSLIIR---------ALRRRSKQSQKSVRKRKALRMILIVLAVFLVCFLPYhvtrILYLLVrlsfi 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 4885341  302 --GSHEDPAVYTY-ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14982 242 adCSARNSLYKAYrITLCLASLNSCLDPLIYYFLSKTFRKRL 283
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
113-339 1.61e-05

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 45.77  E-value: 1.61e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  113 SLATADLLAGC-----GLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHL 187
Cdd:cd15052  41 SLAIADLLVGLlvmplSILTELFGGVWPLPLVLCLLWVTLDVLFCTASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFL 120
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  188 LLAATWTVSLGLGLLPVLgwncLAERAACSVVRPLArshvALLSAAFFMVFGIMLHLYVRICqvvwrhahqIALQQHCLA 267
Cdd:cd15052 121 KIAIVWLISIGISSPIPV----LGIIDTTNVLNNGT----CVLFNPNFVIYGSIVAFFIPLL---------IMVVTYALT 183
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4885341  268 PPHLAATRKGVGTLAVVLGTFGASWLP-FAIYCVVGSHEDPAVYTYATLLPA-----TYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15052 184 IRLLSNEQKASKVLGIVFAVFVICWCPfFITNILTGLCEECNCRISPWLLSVfvwlgYVSSTINPIIYTIFNKTFRRA 261
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
73-345 1.72e-05

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 45.71  E-value: 1.72e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGL----ILHFVFQYLVPSETVSLLTVGFL 148
Cdd:cd15307   1 NYWALLALVLVLGTAAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVmplgILTLVKGHFPLSSEHCLTWICLD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  149 VASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWnclAERAACSVVRPLARSHVA 228
Cdd:cd15307  81 VLFCTASIMHLCTISVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMY---SKDHASVLVNGTCQIPDP 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  229 LLS-----AAFFMVFGIMLHLYVRICQVVW----RHAHQIALQQhclapphlaatrKGVGTLAVVLGTFGASWLPFAIYC 299
Cdd:cd15307 158 VYKlvgsiVCFYIPLGVMLLTYCLTVRLLArqrsRHGRIIRLEQ------------KATKVLGVVFFTFVILWSPFFVLN 225
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 4885341  300 VVGS-------HEDPAVYTYATLLpATYNSMINPIIYAFRNQEIQRA-LWLLLC 345
Cdd:cd15307 226 LLPTvcaeceeRISHWVFDVVTWL-GYASSMVNPIFYTIFNKVFRQAfKKVLLC 278
7tmA_ET_R-like cd14977
endothelin receptors and related proteins, member of the class A family of seven-transmembrane ...
90-328 1.90e-05

endothelin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes endothelin receptors, bombesin receptor subtype 3 (BRS-3), gastrin-releasing peptide receptor (GRPR), neuromedin B receptor (NMB-R), endothelin B receptor-like 2 (ETBR-LP-2), and GRP37. The endothelin receptors and related proteins are members of the seven transmembrane rhodopsin-like G-protein coupled receptor family (class A GPCRs) which activate multiple effectors via different types of G protein.


Pssm-ID: 320108 [Multi-domain]  Cd Length: 292  Bit Score: 45.88  E-value: 1.90e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPS---ETVSLLTVGFL-VASFAASVSSLLAITVD 165
Cdd:cd14977  18 NLMVLCIVCTNYYMRSVPNILIASLALGDLLLLLLCVPLNAYNLLTKDwlfGDVMCKLVPFIqVTSLGVTVFSLCALSID 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAER-------AAC--SVVRPLARSHVALLSAAFFM 236
Cdd:cd14977  98 RYRAAVNSMPMQTIGACLSTCVKLAVIWVGSVLLAVPEAVLSTVARESsldnsslTVCimKPSTPFAETYPKARSWWLFG 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  237 VFGIMLHLYVRICQ-VVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVY----- 310
Cdd:cd14977 178 CYFCLPLAFTAVCYlLMARTLIRAAKEYTRGTKKHMKQRRQLAKTVLCLVLVFAFCWLPEHISNILRATLYNEVLidtrs 257
                       250       260
                ....*....|....*....|...
gi 4885341  311 -----TYATLLPATYNSMINPII 328
Cdd:cd14977 258 tldilDLIGQFLSFFNSCVNPIA 280
7tmA_GPR45 cd15403
G protein-coupled receptor 45, member of the class A family of seven-transmembrane G ...
90-339 1.98e-05

G protein-coupled receptor 45, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the human orphan receptor GPR45 and closely related proteins found in vertebrates. GPR45 is also called PSP24 in Xenopus and PSP24-alpha (or PSP24-1) in mammals. GPR45 shows the highest sequence homology with GPR63 (PSP24-beta, or PSP24-2). PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Mammalian PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320525 [Multi-domain]  Cd Length: 301  Bit Score: 45.99  E-value: 1.98e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCglilhfvfqYLVPSETVSLLTVGFLVASFAASVSS----------- 158
Cdd:cd15403  18 NAIVCLIVYQKPAMRSAINLLLATLAFSDIMLSL---------LCMPFTAVTIITVDWHFGAHFCRISAmlywffvlegv 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 --LLAITVDRYLSLYNaltyysRRTLLGVH---LLLAATWTVSLGLGLLPVLGWNCLA--ERAACSVV----RPLARSHV 227
Cdd:cd15403  89 aiLLIISVDRFLIIVQ------RQDKLNPHrakVMIAISWVLSFCISFPSVVGWTLVEvpARAPQCVLgyteSPADRVYA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  228 ALLSAA-FFMVFGIMLHLYVRICQVVWRHAHQIALQQH--CLAP-----------PH-----LAATRKGVGTLAVVLGTF 288
Cdd:cd15403 163 VLLVVAvFFVPFSIMLYSYLCILNTVRRNAVRIHNHADslCLSQvsklglmglqrPHqmnvdMSFKTRAFTTILILFVGF 242
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 4885341  289 GASWLPFAIYCVVGS-----HEDPAVYTYAT-LLPATY-NSMINPIIYAFRNQEIQRA 339
Cdd:cd15403 243 SLCWLPHTVFSLLSVfsrrfYYSSSFYPISTcVLWLSYlKSVFNPVIYCWRIKKFREA 300
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
90-340 2.28e-05

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 45.69  E-value: 2.28e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMF-VLVGSLATADLLAGCGLI------LHFVFQYLVPSETvSLLTVGFLVASFAASVSSL--- 159
Cdd:cd14980  18 NILVIIWHISSKKKKKKVPkLLIINLAIADFLMGIYLLiiaiadQYYRGRYAQYSEE-WLRSPPCLLACFLVSLSSLmsv 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  160 ---LAITVDRYLSL-----YNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE-RAAC---SVVRPLARSHV 227
Cdd:cd14980  97 lmmLLITLDRYICIvypfsNKRLSYKSAKIILILGWLFSIIFAAIPILYSINQPGDNRLYGySSICmpsNVSNPYYRGWL 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  228 ALLSAAFFMVFGIMLHLYVRICqvvwrhahqIALQQHCLAPPHLAATRKG--VGTLAVVLGTFGASWLPFAIYCVVGSHE 305
Cdd:cd14980 177 IAYLLLTFIAWIIICILYILIF---------ISVRKSRKSARRSSSKRDKriAIRLALILITDLICWLPYYIVIFSGLLT 247
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 4885341  306 DPAVYTYAT------LLPatYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14980 248 STEIDIHVLqfiailALP--LNSAINPYLYTLTTPTFKRDF 286
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
154-338 2.69e-05

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 45.22  E-value: 2.69e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLA---ERAACSVVRPLARSHVALL 230
Cdd:cd15215  85 AGVNTIVVVSVDRYLAIIHPLSYPTKMTPRRGYLLIYGTWIVSVLQSTPPLYGWGQAAfdeRNALCSVIWGSSYSYTILS 164
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 SAAFFMV-FGIMLHLYvricQVVWRHAHQialQQHClapphlaatrKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAV 309
Cdd:cd15215 165 VVSSFVLpVIIMLACY----SMVFRAARR---CYHC----------KAAKVIFIIIFSYVLSMGPYSFLSVLAVWVDTQV 227
                       170       180       190
                ....*....|....*....|....*....|..
gi 4885341  310 YTYAT---LLPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15215 228 PQWVIsiiLWLFFLQCCIHPYIYGYMHKSIKK 259
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
73-337 2.97e-05

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 45.28  E-value: 2.97e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   73 NPW-DVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL---LTVGFL 148
Cdd:cd15948   1 HPWiSIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFnacLVQMFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  149 VASFAASVSS-LLAITVDRYLSLYNALTYY-----SRRTLLGVHLLLAATWTVSLGLGLLPVLGWnCLAERAACSVVRPL 222
Cdd:cd15948  81 LHSFSIMESAvLLAMAFDRYVAICNPLRYAtiltnSVITKIGLAALARAVTLMTPLPFLLRRLPY-CRSHVIAHCYCEHM 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  223 ARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV-- 300
Cdd:cd15948 160 AVVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTmh 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 4885341  301 -VGSHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQ 337
Cdd:cd15948 240 rFARHVAPHVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
77-333 3.30e-05

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 45.11  E-value: 3.30e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHF--VFQYLVPSETVSLLTVGFLVASFA- 153
Cdd:cd14964   3 IILSLLTCLGLLGNLLVLLSLVRLRKRPRSTRLLLASLAACDLLASLVVLVLFflLGLTEASSRPQALCYLIYLLWYGAn 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 -ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVALLSA 232
Cdd:cd14964  83 lASIWTTLVLTYHRYFALCGPLKYTRLSSPGKTRVIILGCWGVSLLLSIPPLVGKGAIPRYNTLTGSCYLICTTIYLTWG 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 ----AFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRkgvgTLAVVLGTFGASWLPFAIYCVV-----GS 303
Cdd:cd14964 163 fllvSFLLPLVAFLVIFSRIVLRLRRRVRAIRSAASLNTDKNLKATK----SLLILVITFLLCWLPFSIVFILhalvaAG 238
                       250       260       270
                ....*....|....*....|....*....|
gi 4885341  304 HEDPAVYTYATLLpATYNSMINPIIYAFRN 333
Cdd:cd14964 239 QGLNLLSILANLL-AVLASTLNPFIYCLGN 267
7tmA_NPR-like_invertebrate cd15391
invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G ...
88-334 3.56e-05

invertebrate neuropeptide receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes putative neuropeptide receptor found in invertebrates, which is a member of class A of 7-transmembrane G protein-coupled receptors. This orphan receptor shares a significant amino acid sequence identity with the neurokinin 1 receptor (NK1R). The endogenous ligand for NK1R is substance P, an 11-amino acid peptide that functions as a vasodilator and neurotransmitter and is released from the autonomic sensory nerve fibers.


Pssm-ID: 320513 [Multi-domain]  Cd Length: 289  Bit Score: 44.81  E-value: 3.56e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   88 GENALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVF-----QYLVPSETVSLLTVGFLVASFAASVSSLLAI 162
Cdd:cd15391  16 GGNYSVIVVFYDGRRSRTDLNYYLINLAVSDLIMAL-FCMPFTFtqimlGHWVFPAPMCPIVLYVQLVSVTASVLTNTAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALT--YYSRRTL---LGVHLLLAATWTVSLGLGLLPVLGWNClAERAACSVVRPLARSH-----VALLSA 232
Cdd:cd15391  95 GIDRFFAVIFPLRsrHTKSRTKciiASIWAISFSLSSVQLFAGRTQRYGQYS-EGRVLCGESWPGPDTSrsaytVFVMLL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  233 AFFMVFGIMLHLYVRICQVVWR-----HAHQIALQQHclapphLAATRKGVGTLAVVLGTFGASWLPFAIYCVVG----- 302
Cdd:cd15391 174 TYIIPLLILTSTYGYVGFRLWNrtapgNADKGRDDMQ------IKSKRKVIKMLVFVVLMFGICWLPLHLFNLVQdfstv 247
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  303 -----SHEDPAVYtYATLLPATYNSMINPIIYAFRNQ 334
Cdd:cd15391 248 frnmpQHTTRLIY-GACHWIAMSNSFVNPIIYLFMND 283
7tmA_mAChR_M4 cd15298
muscarinic acetylcholine receptor subtype M4, member of the class A family of ...
90-340 6.20e-05

muscarinic acetylcholine receptor subtype M4, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to G(i/o) types of G proteins. The M4 receptor is mainly found in the CNS and function as an inhibitory autoreceptor regulating acetycholine release. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341344 [Multi-domain]  Cd Length: 262  Bit Score: 44.24  E-value: 6.20e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLI----LHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15298  18 NILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMnlytVYIIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACsvvrPLARSHVALLS----------AAFF 235
Cdd:cd15298  98 RYFCVTKPLTYPARRTTKMAGLMIAAAWVLSFVLWAPAILFWQFVVGKRTV----PDNQCFIQFLSnpavtfgtaiAAFY 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFGIMLHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVGSHED---PAVYTY 312
Cdd:cd15298 174 LPVVIMTVLYIHISLASARE-------------------RKVTRTIFAILLAFILTWTPYNVMVLVNTFCQsciPDTVWS 234
                       250       260
                ....*....|....*....|....*...
gi 4885341  313 ATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15298 235 IGYWLCYVNSTINPACYALCNATFKKTF 262
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
76-329 8.19e-05

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 43.88  E-value: 8.19e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   76 DVLLCVSGTViagENALVVALIASTPALRTPMFVLVGSLATADLLA-GCGLILHFVFQYLVPSE----TVSLLTVGFLVA 150
Cdd:cd14979   7 YVAIFVVGIV---GNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLIlLVGLPVELYNFWWQYPWafgdGGCKLYYFLFEA 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAER----------AACSVVR 220
Cdd:cd14979  84 CTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIQYLNgplpgpvpdsAVCTLVV 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  221 PLAR----SHVALLSAAFFMVFgIMLHLYVRICQVVWR-----HAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGAS 291
Cdd:cd14979 164 DRSTfkyvFQVSTFIFFVLPMF-VISILYFRIGVKLRSmrnikKGTRAQGTRNVELSLSQQARRQVVKMLGAVVIAFFVC 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  292 WLPF----AIYCVVGSHEDPAVYTYATLLPATY-----NSMINPIIY 329
Cdd:cd14979 243 WLPFhaqrLMFSYASKEDTFLFDFYQYLYPISGilfylSSAINPILY 289
7tmA_D1B_dopamine_R cd15319
D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
90-340 9.21e-05

D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320442 [Multi-domain]  Cd Length: 317  Bit Score: 43.79  E-value: 9.21e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMF-VLVGSLATADLLAGCgLILHFVFQYLV----PSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15319  18 NILVCAAVVRFRHLRSKVTnIFIVSLAVSDLFVAL-LVMPWKAVAEVagywPFGAFCDVWVAFDIMCSTASILNLCVISV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLG------------------LGLLPVLGWNCLAERAACSVVRPLARSH 226
Cdd:cd15319  97 DRYWAISSPFRYERKMTQRVALVMISVAWTLSVLisfipvqlnwhkdsgddwVGLHNSSISRQVEENCDSSLNRTYAISS 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 vALLSaaFFMVFGIMLHLYV---RICQVVWR----------HAH-----QIALQQHCLAPPHLAATRKGVGTLAVVLGTF 288
Cdd:cd15319 177 -SLIS--FYIPVAIMIVTYTriyRIAQIQIRrissleraaeHAQscrsnRIDCHHHTSLRTSIKKETKVLKTLSVIMGVF 253
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4885341  289 GASWLPFAIY-CVVGSHEDPAVYTYATLLPAT------------YNSMINPIIYAFrNQEIQRAL 340
Cdd:cd15319 254 VCCWLPFFILnCMVPFCDRPPADPDAGLPCVSettfdvfvwfgwANSSLNPIIYAF-NADFRKVF 317
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
78-340 9.36e-05

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 43.75  E-value: 9.36e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGtviageNALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVS----LLTVGFLVAsFA 153
Cdd:cd15235  13 LLTLLG------NLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISyagcLAQMYFFIA-FG 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAI-TVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLA-----------------ERAA 215
Cdd:cd15235  86 NTDSFLLAVmAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSfcgsneiphffcdlqplLKLS 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  216 CSVVRP-----LARSHVALLSAAFFMVFGimlhlYVRICQVVwrhahqialqqhcLAPPHLAATRKGVGT----LAVVLG 286
Cdd:cd15235 166 CSDTSLnelliFTEGAVVVLGPFLLIVLS-----YARILAAV-------------LKVPSAAGRRKAFSTcgshLTVVAL 227
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 4885341  287 TFGA-SWL---PFAIYCVVGSHEDPAVYTYATllpatynSMINPIIYAFRNQEIQRAL 340
Cdd:cd15235 228 FYGTiIGVyfqPSSSYSADKDRVATVMYTVVT-------PMLNPFIYSLRNKDVKGAL 278
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
77-339 1.12e-04

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 43.14  E-value: 1.12e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF---- 152
Cdd:cd14995   6 LVLLICGVGIVG-NIMVVLVVLRTRHMRTPTNCYLVSLAVADLMVLVAAGLPNEIESLLGPDSWIYGYAGCLLITYlqyl 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 --AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSlglgLLPVLGWNCLAE--------RAACSVVRPL 222
Cdd:cd14995  85 giNASSLSITAFTIERYIAICHPMKAQFICTVSRAKKIICFVWIFT----SLYCSPWLFLLDlsikhygdDIVVRCGYKV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  223 ARSH---VALLSAAFFMVFGIMLH--LYVRICQVvwrhahqialqqhclapphLAATRKGV-GTLAVVLGTFGASWLPFA 296
Cdd:cd14995 161 SRHYylpIYLADFVLFYVIPLLLAivLYGLIGRI-------------------LFSSRKQVtKMLAVVVVLFALLWMPYR 221
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 4885341  297 IYCVVGSHEDPAVYTYATLLPAT----YNSMINPIIYAFRNQEIQRA 339
Cdd:cd14995 222 TLVVYNSFASPPYLDLWFLLFCRtciyLNSAINPILYNLMSQKFRAA 268
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
146-333 1.23e-04

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 43.42  E-value: 1.23e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  146 GFLVASFA-ASVSSLLAITVDRYLSL--YNALTYYSRRTllgVHLLLAATWTVSLGLGLLPVLGWNCLAER---AACSV- 218
Cdd:cd15074  77 GFCGFLFGcCSINTLTAISIYRYLKIchPPYGPKLSRRH---VCIVIVAIWLYALFWAVAPLVGWGSYGPEpfgTSCSId 153
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  219 --VRPLARSHVALLSAAFFMVF----GIMLHLYVRICQVVwrHAHQIALQQHCLAPPHLAATRKGVGTLAVVL-GTFGAS 291
Cdd:cd15074 154 wtGASASVGGMSYIISIFIFCYllpvLIIVFSYVKIIRKV--KSSRKRVAGFDSRSKRQHKIERKVTKVAVLIcAGFLIA 231
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 4885341  292 WLPFAIYCVVGSHEDP-AVYTYATLLPATY---NSMINPIIYAFRN 333
Cdd:cd15074 232 WTPYAVVSMWSAFGSPdSVPILASILPALFaksSCMYNPIIYLLFS 277
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
90-340 1.50e-04

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 43.14  E-value: 1.50e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLIL---HFVFQYLVPSETV-SLLTVGFLVASFAASVSSLLAITVD 165
Cdd:cd14985  18 NLFVVWVFLFPRGPKRVADIFIANLAAADLVFVLTLPLwatYTANQYDWPFGAFlCKVSSYVISVNMFASIFLLTCMSVD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLA----ERAACSVVRPLARSHVAL----LSAAFFMV 237
Cdd:cd14985  98 RYLAIVHPVASRRLRRRRQARVTCALIWVVACLLSLPTFLLRSLQAienlNKTACIMLYPHEAWHFGLslelNILGFVLP 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  238 FGIMLHLYVRICQVVWRHAHQIalqqhclaPPHLAATRKGVGTLAVVLGTFGASWLPFAIY--------------CVVGS 303
Cdd:cd14985 178 LLIILTCYFHIARSLRKRYERT--------GKNGRKRRKSLKIIFALVVAFLVCWLPFHFFkfldflaqlgairpCFWEL 249
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 4885341  304 HEDPAVyTYATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14985 250 FLDLGL-PIATCL-AFTNSCLNPFIYVFVDRRFRQKV 284
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
75-340 3.45e-04

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 41.81  E-value: 3.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   75 WDVLLCVSGTVIA-GENALVVALIASTPALRTPMFVLVGSLATADLLAGCGL----ILHFVFQYLVP-SETVSLLTVGFL 148
Cdd:cd15305   2 WPALLILIIIILTiGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVmpvsLIAILYDYAWPlPRYLCPIWISLD 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  149 VASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVA 228
Cdd:cd15305  82 VLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWTISIGISMPIPVIGLQDDEKVFVNGTCVLNDENFV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  229 LLSA--AFFMVFGIMLHLYVRICQVVWRhahqialQQhclappHLAATRKGVGTLAVVLGTFGASWLPF------AIYCV 300
Cdd:cd15305 162 LIGSfvAFFIPLIIMVITYCLTIQVLQR-------QQ------AINNERRASKVLGIVFFLFLIMWCPFfitnilSVLCK 228
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 4885341  301 VGSHEDPAVYTYATLLPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15305 229 EACDQKLMEELLNVFVWVGYvSSGINPLVYTLFNKTYRRAF 269
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
78-340 3.56e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 41.82  E-value: 3.56e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   78 LLCVSGTViagENALVVALIASTPALRTPMFVLVGSLATADLLAgCG------LILHFVFQYLVPSETVSLLtvgFLVAS 151
Cdd:cd15203   9 LIIVLGVV---GNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLL-CLvslpftLIYTLTKNWPFGSILCKLV---PSLQG 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVS--SLLAITVDRYLSLYNALtyYSRRTLLGVHLLLAATWTVSLGLG--------LLPVLGWNCLAERAACSVVRP 221
Cdd:cd15203  82 VSIFVStlTLTAIAIDRYQLIVYPT--RPRMSKRHALLIIALIWILSLLLSlplaifqeLSDVPIEILPYCGYFCTESWP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  222 LARSH----VALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGT---LAVVLGTFGASWLP 294
Cdd:cd15203 160 SSSSRliytISVLVLQFVIPLLIISFCYFRISLKLRKRVKKKRGKRTLSSRRRRSELRRKRRTnrlLIAMVVVFAVCWLP 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 4885341  295 FAIY-CVVGSHEDPAVYTYATLLP-------ATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15203 240 LNLFnLLRDFEPLPQIDGRHFYLIflichliAMSSACVNPLLYGWLNDNFRKEF 293
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
147-334 5.45e-04

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 41.45  E-value: 5.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  147 FLVASFAASVSSLLAITVDRYLSLYNALTyySRRTLLGVHLLLAATWTVSLGLG--LLPVLGWNCLAERAACSVVRPLAR 224
Cdd:cd16003  79 FPITSVFASIYSMTAIAVDRYMAIIDPLK--PRLSATATKVVIGSIWILAFLLAfpQCLYSKTKVMPGRTLCFVAWPGGP 156
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 S-----HVALLSAAFFMVFGIMLHLYVRICQVVWrhAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYC 299
Cdd:cd16003 157 DqhftyHIIVIVLVYCLPLLVMGITYTIVGITLW--GGEIPGDTSDKYHEQLRAKRKVVKMMIIVVLTFAICWLPYHIYF 234
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 4885341  300 VV-GSHEDPAVYTY------ATLLPATYNSMINPIIYAFRNQ 334
Cdd:cd16003 235 IVtGLYQQLNRWKYiqqvylASFWLAMSSTMYNPIIYCCLNK 276
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
90-332 5.97e-04

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 41.20  E-value: 5.97e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCgLILHFVFQYLVPSE--------TVSLLTVGFLVASfaaSVSSLLA 161
Cdd:cd15213  18 NSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSL-VCMPFAAVTIITGRwifgdifcRISAMLYWFFVLE---GVAILLI 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  162 ITVDRYLSLYNaltyysRRTLLGVH---LLLAATWTVSLGLGLLPVLGWNCLAERA---ACSVVRPLARSH----VALLS 231
Cdd:cd15213  94 ISVDRYLIIVQ------RQDKLNPHrakILIAVSWVLSFCVSFPPLVGWGKYEFPPrapQCVLGYTESPADriyvVLLLV 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 AAFFMVFGIMLHLYVRICQVVwRHAHQIALQqhclapphlaatrkgvgTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYT 311
Cdd:cd15213 168 AVFFIPFLIMLYSYFCILNTV-RSFKTRAFT-----------------TILILFIGFSVCWLPYTVYSLLSVFSRYSSSF 229
                       250       260
                ....*....|....*....|....*
gi 4885341  312 YAT---LLPATY-NSMINPIIYAFR 332
Cdd:cd15213 230 YVIstcLLWLSYlKSAFNPVIYCWR 254
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
77-340 6.39e-04

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 41.10  E-value: 6.39e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL---LTVGFLVASFA 153
Cdd:cd15231   6 IFLIIYLVTLLG-NLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYigcLAQLFFFVSFV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITV-DRYLSLYNALTYY---SRRTLLGvhlLLAATWTV----SLGLGLLPVLGWNCLAER------------ 213
Cdd:cd15231  85 GTECLLLAVMAyDRYVAICNPLHYAvimSRKVCLQ---LAAASWLCgflnSAVHTVLTFRLSFCGSNQishffcdippll 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  214 -AACSVVRPlarSHVALLSAAFFMVFG----IMLHlYVRICQVVwrhahqialqqhcLAPPHLAATRKGVGT----LAVV 284
Cdd:cd15231 162 kLSCSDTSL---NEVLLLVASVFIGLTpflfIVIS-YVYIISTI-------------LKIRSAEGRRKAFSTcashLTVV 224
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 4885341  285 LGTFGAswlpfAIYCVVG--SHEDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15231 225 TLFYGT-----AIFNYNRpsSGYSLDKDTLISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
90-338 1.02e-03

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 40.47  E-value: 1.02e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLIlHFVFQ------YLVPSETVSLltVGFL-VASFAASVSSLLAI 162
Cdd:cd15393  18 NFLVIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSI-PFQFQaallqrWVLPRFMCPF--CPFVqVLSVNVSVFTLTVI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTyySRRTLLGVHLLLAATWTVSLGLGLLPVLGWNC--------LAERAACSVVRPLARS----HVALL 230
Cdd:cd15393  95 AVDRYRAVIHPLK--ARCSKKSAKIIILIIWILALLVALPVALALRVeeltdktnNGVKPFCLPVGPSDDWwkiyNLYLV 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 SAAFFMVFGIMLHLYVRICQVVWRH----AHQIALQQHCLApphlaATRKGVGTLAVVLGTFGASWLPFAIYCVVGS-HE 305
Cdd:cd15393 173 CVQYFVPLVIICYAYTRIAVKIWGTkapgNAQDVRDDEILK-----NKKKVIKMLIIVVALFALCWLPLQTYNLLNEiKP 247
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 4885341  306 DPAVYTYATLL------PATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15393 248 EINKYKYINIIwfcshwLAMSNSCYNPFIYGLYNEKFKR 286
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
90-248 1.10e-03

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 40.28  E-value: 1.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGL-------ILHFVFQyLVPSETVSlltvGFLVASFAASVSSLLAI 162
Cdd:cd14984  18 NSLVLLVLLYYRKLRSMTDVYLLNLALADLLFVLTLpfwavyaADGWVFG-SFLCKLVS----ALYTINFYSGILFLACI 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  163 TVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGL---------GLLPVLGWNCLAERAACSVVRPLARSHVALLSAA 233
Cdd:cd14984  93 SIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLslpefifsqVSEENGSSICSYDYPEDTATTWKTLLRLLQNILG 172
                       170
                ....*....|....*
gi 4885341  234 FFMVFGIMLHLYVRI 248
Cdd:cd14984 173 FLLPLLVMLFCYSRI 187
7tmA_Mel1C cd15401
melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G ...
90-338 1.40e-03

melatonin receptor subtype 1C, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320523 [Multi-domain]  Cd Length: 279  Bit Score: 39.89  E-value: 1.40e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGC---GLILHFVFQYLVPSETVSLLTVGFLVA-SFAASVSSLLAITVD 165
Cdd:cd15401  18 NLLVILSVLRNKKLRNAGNIFVVSLSVADLVVAVypyPLILLAIFHNGWTLGNIHCQISGFLMGlSVIGSVFNITAIAIN 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERA--ACSVVRPLARSHVALLSAAFFMV-FGIML 242
Cdd:cd15401  98 RYCYICHSLRYDKLYNMKKTCCYVCLTWVLTLAAIVPNFFVGSLQYDPRiySCTFAQTVSSSYTITVVVVHFIVpLSIVT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HLYVRICQVVWRHAHQIalQQHCLAPPHLAATRKGVgTLAVVLGTFGASWLPFAI----YCVVGSHEDPAVYTYATLLP- 317
Cdd:cd15401 178 FCYLRIWVLVIQVKHRV--RQDSKQKLKANDIRNFL-TMFVVFVLFAVCWGPLNFiglaVAINPLKVAPKIPEWLFVLSy 254
                       250       260
                ....*....|....*....|...
gi 4885341  318 --ATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15401 255 fmAYFNSCLNAVIYGVLNQNFRK 277
7tmA_Anaphylatoxin_R-like cd14974
anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class ...
77-340 1.57e-03

anaphylatoxin receptors and related G protein-coupled chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily of G-protein coupled receptors includes anaphylatoxin receptors, formyl peptide receptors (FPR), prostaglandin D2 receptor 2, GPR1, and related chemokine receptors. The anaphylatoxin receptors are a group of G-protein coupled receptors that bind anaphylatoxins. The members of this group include C3a and C5a receptors. The formyl peptide receptors (FPRs) are chemoattractant GPCRs that involved in mediating immune responses to infection. They are expressed mainly on polymorphonuclear and mononuclear phagocytes and bind N-formyl-methionyl peptides (FMLP), which are derived from the mitochondrial proteins of ruptured host cells or invading pathogens. Chemokine receptor-like 1 (also known as chemerin receptor 23) is a GPCR for the chemoattractant adipokine chemerin, also known as retinoic acid receptor responder protein 2 (RARRES2), and for the omega-3 fatty acid derived molecule resolvin E1. Interaction with chemerin induces activation of the MAPK and PI3K signaling pathways leading to downstream functional effects, such as a decrease in immune responses, stimulation of adipogenesis, and angiogenesis. On the other hand, resolvin E1 negatively regulates the cytokine production in macrophages by reducing the activation of MAPK1/3 and NF-kB pathways. Prostaglandin D2 receptor, also known as CRTH2, is a chemoattractant G-protein coupled receptor expressed on T helper type 2 cells that binds prostaglandin D2 (PGD2). PGD2 functions as a mast cell-derived mediator to trigger asthmatic responses and also causes vasodilation. PGD2 exerts its inflammatory effects by binding to two G-protein coupled receptors, the D-type prostanoid receptor (DP) and PD2R2 (CRTH2). PD2R2 couples to the G protein G(i/o) type which leads to a reduction in intracellular cAMP levels and an increase in intracellular calcium. GPR1 is an orphan receptor that can be activated by the leukocyte chemoattractant chemerin, thereby suggesting that some of the anti-inflammatory actions of chemerin may be mediated through GPR1.


Pssm-ID: 320105 [Multi-domain]  Cd Length: 274  Bit Score: 39.98  E-value: 1.57e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVaLIASTPALRTPMFVLVGSLATADLLagCGLILHFVFQYLVPSETVSLLTVGFLVASFA--- 153
Cdd:cd14974   5 VLYALIFLLGLPGNGLVI-WVAGFKMKRTVNTVWFLNLALADFL--FCLFLPFLIVYIAMGHHWPFGSVLCKLNSFVisl 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ---ASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGW------NCLAERAACSVVRPLAR 224
Cdd:cd14974  82 nmfASVFLLTAISLDRCLLVLHPVWAQNHRTVRLASVVCVGIWILALVLSVPYFVFRdtvthhNGRSCNLTCVEDYDLRR 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  225 S-HVALLSAAFFMVFGIMLhLYVRICQVVwrhahqIALQqhcLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGS 303
Cdd:cd14974 162 SrHKALTVIRFLCGFLLPL-LIIAICYSV------IAVK---LRRKRLAKSSKPLRVLLAVVVAFFLCWLPYHVFALLEL 231
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 4885341  304 HEDPAVYT-------YATLLpATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd14974 232 VAAAGLPEvvllglpLATGL-AYFNSCLNPILYVFMGQDFRKRL 274
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
90-340 1.77e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 39.78  E-value: 1.77e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFV--FQY--LVPSETVSLLTVGFLVASFAASVSSLLAITVD 165
Cdd:cd15928  18 NLLTVLVIGRSRDMRTTTNLYLSSLAVSDLLIFLVLPLDLYrlWRYrpWRFGDLLCRLMYFFSETCTYASILHITALSVE 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA-------CSVV---RPLARSHVALLSAAFF 235
Cdd:cd15928  98 RYLAICHPLRAKVLVTRGRVKLLIAVIWAVAIVSAGPALVLVGVEHIQGQqtprgfeCTVVnvsSGLLSVMLWVSTSFFF 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MVFGIMLHLYVRICQVVWRHAHQIalqQHCLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSH-EDPA-----V 309
Cdd:cd15928 178 VPMVCLSLLYGLIGRALWDRRQRS---RTAGASRRDNNHRQTVRMLAVIVLAFVLCWLPFHVGRVIFNHsRASTkhlhyV 254
                       250       260       270
                ....*....|....*....|....*....|....
gi 4885341  310 YTYATLLPAT---YNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15928 255 SQYFNLVSFVlfyLSAAINPILYNLMSKRYRYAV 288
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
90-176 1.84e-03

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 39.70  E-value: 1.84e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLL--TVGFLVASFAASVSSLL--AITVD 165
Cdd:cd15409  18 NLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSgcAAQFFFFGFSATTECFLlaAMAYD 97
                        90
                ....*....|.
gi 4885341  166 RYLSLYNALTY 176
Cdd:cd15409  98 RYVAICNPLLY 108
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
90-331 1.85e-03

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 39.57  E-value: 1.85e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLL---TVGFL-VASFAASVSSLLAITVD 165
Cdd:cd15001  17 NSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFlckAVAYLqLLSFICSVLTLTAISIE 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  166 RYLSLYNALTYYS-------RRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRP---LARSHVALLSAAFF 235
Cdd:cd15001  97 RYYVILHPMKAKSfctigraRKVALLIWILSAILASPVLFGQGLVRYESENGVTVYHCQKAWPstlYSRLYVVYLAIVIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  236 MV-FGIMLHLYVRIcqvvwrhahqialqqhclapphlaaTRKGV-GTLAVVLGTFGASWLPFAIYCV-VGSHEDPAVYT- 311
Cdd:cd15001 177 FIpLIVMTFAYARD-------------------------TRKQViKMLISVVVLFAVCWGPLLIDNLlVSFDVISTLHTq 231
                       250       260
                ....*....|....*....|....*.
gi 4885341  312 ------YATLLPATYNSMINPIIYAF 331
Cdd:cd15001 232 alkymrIAFHLLSYANSCINPIIYAF 257
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
90-339 2.47e-03

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 39.32  E-value: 2.47e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALR----TPMFVLvgSLATADLLAgcgLILHFVFQ---YLVPSETVSLLTVGFL----VASFAASVSS 158
Cdd:cd15098  18 NSLVITVLARVKPGKrrstTNVFIL--NLSIADLFF---LLFCVPFQatiYSLPEWVFGAFMCKFVhyffTVSMLVSIFT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAA-----CSVVRPLARSHVALLSAA 233
Cdd:cd15098  93 LVAMSVDRYIAVVHSRTSSSLRTRRNALLGVLVIWVLSLAMASPVAVHQDLVHHWTAsnqtfCWENWPEKQQKPVYVVCT 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  234 FfmVFGIMLHLY-VRICQV-VWRHAHQIALQqhcLAPPHLAATRKGVGTLAVVLGTFGASWLPFAIYCV-VGSHEDPavY 310
Cdd:cd15098 173 F--VFGYLLPLLlITFCYAkVLNHLHKKLKN---MSKKSERSKKKTAQTVLVVVVVFGISWLPHHIIHLwVEFGDFP--L 245
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 4885341  311 TYATLL-------PATYNSMINPIIYAFRNQEIQRA 339
Cdd:cd15098 246 TQASFVlritahcLAYANSCVNPIIYAFLSENFRKA 281
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
90-338 2.59e-03

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 39.38  E-value: 2.59e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCglilhfvfqYLVPSETVSLLTVGFLVASFA----------ASVSSL 159
Cdd:cd15205  18 NSLVIYVVTRKRAMRTATNIFICSLALSDLLITF---------FCIPFTLLQNISSNWLGGAFMckmvpfvqstAVVTSI 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  160 LAIT---VDRYLSLYNALT----YYSRR--TLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE-RAACSVVRPLARSH--- 226
Cdd:cd15205  89 LTMTciaVERHQGIVHPLKmkwqYTNRRafTMLGLVWIVSVIVGSPMLFVQQLEVKYDFLYEkRHVCCLERWYSPTQqki 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  227 --VALLSAAFFMVFGIMLHLYVRICQVVW--RHAHQIALQQHCLAPPHLAATRK---GVGTLAVVLGTFGASWLPFAIYC 299
Cdd:cd15205 169 ytTFILVILFLLPLTTMLFLYSRIGYELWikKRVGDASVLQTIHGIEMSKISRKkkrAVKMMVTVVLLFAVCWAPFHVVH 248
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 4885341  300 VVGSH--------EDPAVYTYATL-LPATYNSMINPIIYAFRNQEIQR 338
Cdd:cd15205 249 MMIEYsnlenkydGVTIKLIFAIVqLIGFSNSFNNPIVYAFMNENFKK 296
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
77-345 2.80e-03

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 39.08  E-value: 2.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAG-CGLILHF---VFQYLVPSETVSLLTvGFLVA-S 151
Cdd:cd15084  15 VLMGMVVALASFVNGLVIVVSIKYKKLRSPLNYILVNLAVADLLVTlFGSSVSFsnnIVGFFVFGKTMCEFE-GFMVSlT 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  152 FAASVSSLLAITVDRYLSLYNAL---TYYSRRTLLGVhlllAATWTVSLGLGLLPVLGWNCLAE---RAACSVVRPLARS 225
Cdd:cd15084  94 GIVGLWSLAILAFERYLVICKPMgdfRFQQRHAVSGC----AFTWGWSLLWTSPPLFGWSSYVPeglRTSCGPNWYTGGT 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 H-----VALLSAAFFMVFGIMLHLYVRICQVVwrhaHQIALQQHCLAPPHLAATRKGVGTLAVVLGtFGASWLPFAIYC- 299
Cdd:cd15084 170 NnnsyiLALFVTCFALPLSTIIFSYSNLLLTL----RAVAAQQKESETTQRAEKEVTRMVIAMVMA-FLICWLPYATFAm 244
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 4885341  300 VVGSHEDPAVYTYATLLPATYN---SMINPIIYAFRNQEIQRALWLLLC 345
Cdd:cd15084 245 VVATNKDVVIQPTLASLPSYFSktaTVYNPIIYVFMNKQFRSCLLELLC 293
7tmA_CXCR5 cd15181
CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G ...
90-331 2.96e-03

CXC chemokine receptor type 5, member of the class A family of seven-transmembrane G protein-coupled receptors; CXCR5 is a B-cell selective receptor that binds specifically to the homeostatic chemokine CXCL13 and regulates adaptive immunity. The receptor is found on all peripheral blood and tonsillar B cells and is involved in lymphocyte migration (homing) to specific tissues and development of normal lymphoid tissue. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines.


Pssm-ID: 341336 [Multi-domain]  Cd Length: 281  Bit Score: 38.96  E-value: 2.96e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLagcgliLHFVFQYLVPSETVSLLTVGFLVASFAAS------VSSLLA-- 161
Cdd:cd15181  18 NGLVLTILLRRRRSRRTTENYLLHLALADLL------LLLTFPFSVVESIAGWVFGTFLCKLVGAIhklnfyCSSLLLac 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  162 ITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGL----LPVLGWNCLAERAACSVVRP-LARSHVALLS----- 231
Cdd:cd15181  92 ISVDRYLAIVHAIHSYRHRRLRSVHLTCGSIWLVCFLLSLpnlvFLEVETSTNANRTSCSFHQYgIHESNWWLTSrflyh 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  232 -AAFFMVFGIMLHLYVRICQVVwrhahqialqqhCLAPPHLaaTRKGVGTLAV-VLGTFGASWLPFAIYCVVGSHEDPAV 309
Cdd:cd15181 172 vVGFFLPLLIMGYCYATIVVTL------------CQSSRRL--QKQKAIRVAIlVTLVFCLCWLPYNIVIFLDTLDDLKA 237
                       250       260       270
                ....*....|....*....|....*....|....*
gi 4885341  310 YTYATLLPATYNSMI-------------NPIIYAF 331
Cdd:cd15181 238 VVKNCKLNDLLDAAItvteslgfshcclNPILYAF 272
7tmA_5-HT5 cd15328
serotonin receptor subtype 5, member of the class A family of seven-transmembrane G ...
90-340 3.38e-03

serotonin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; 5-HT5 receptor, one of 14 mammalian 5-HT receptors, is activated by the neurotransmitter and peripheral signal mediator serotonin (also known as 5-hydroxytryptamine or 5-HT). The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/0) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320451 [Multi-domain]  Cd Length: 259  Bit Score: 38.78  E-value: 3.38e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGC-----GLILHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAITV 164
Cdd:cd15328  18 NLLVLVTILRVRTFHRVPHNLVASMAVSDVLVAAlvmplSLVHELSGRRWQLGRSLCQVWISFDVLCCTASIWNVTAIAL 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  165 DRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLG-WNCL--AERAACSVVRPLARSHVALLsAAFFMVFGIM 241
Cdd:cd15328  98 DRYWSITRHLEYTLRTRRRISNVMIALTWALSAVISLAPLLFgWGETysEDSEECQVSQEPSYTVFSTF-GAFYLPLCVV 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRICQVVWRHahqialqqhclapphlaatRKGVGTLAVVLGTFGASWLPFAIYCVVG---SHEDPAVYTYATLLPA 318
Cdd:cd15328 177 LFVYWKIYKAAQKE-------------------KRAALMVGILIGVFVLCWIPFFLTELISplcSCDIPPIWKSIFLWLG 237
                       250       260
                ....*....|....*....|..
gi 4885341  319 TYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15328 238 YSNSFFNPLIYTAFNKNYNNAF 259
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
159-340 4.73e-03

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 38.42  E-value: 4.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  159 LLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLG-----LGLLPVLGWNCLAERAACSVVRPLARSHVA----L 229
Cdd:cd15095  91 LTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLlsipvAIYYRLEEGYWYGPQTYCREVWPSKAFQKAymiyT 170
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  230 LSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATRKGVGTLAVVLGTFGASWLP---FAIYCVVGSHED 306
Cdd:cd15095 171 VLLTYVIPLAIIAVCYGLILRRLWRRSVDGNNQSEQLSERALRQKRKVTRMVIVVVVLFAICWLPnhvLNLWQRFDPNFP 250
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 4885341  307 PAVYTYA---TLLPATY-NSMINPIIYAFRNQEIQRAL 340
Cdd:cd15095 251 ETYATYAlkiAALCLSYaNSAVNPFVYAFMGENFRKYF 288
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
90-176 4.99e-03

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 38.16  E-value: 4.99e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSL---LTVGFLVASFAASVSSLLAITV-D 165
Cdd:cd15415  18 NLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYsacIAQHFFFAVFVTTEGFLLAVMAyD 97
                        90
                ....*....|.
gi 4885341  166 RYLSLYNALTY 176
Cdd:cd15415  98 RYVAICNPLLY 108
7tmA_XCR1 cd15182
XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
90-340 5.04e-03

XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; XCR1 is a chemokine receptor specific for XCL1 and XCL2 (previously called lymphotactin alpha/beta), which differ in only two amino acids. XCL1/2 is the only member of the C chemokine subfamily, which is unique as containing only two of the four cysteines that are found in other chemokine families. Human XCL1/2 has been shown to be secreted by activated CD8+ T cells and upon activation of the innate immune system. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling.


Pssm-ID: 341337 [Multi-domain]  Cd Length: 271  Bit Score: 38.11  E-value: 5.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTPMFVLVGSLATADLLAGCGL---ILHFVFQYLVPSETVSLLTVGFLVaSFAASVSSLLAITVDR 166
Cdd:cd15182  18 NGLVLWILVKYEKLKTLTNIFILNLAISDLLFTFTLpfwASYHSSGWIFGEILCKAVTSIFYI-GFYSSILFLTLMTIDR 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  167 YLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWN---CLAERAACSVVRPLARSHVALLSAAFFMV-FGIML 242
Cdd:cd15182  97 YLAVVHPLSALRSRKLRYASLVSVAVWVISILASLPELILSTvmkSDEDGSLCEYSSIKWKLGYYYQQNLFFLIpLGIIV 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  243 HLYVRICQVVWRHAHQialQQHclapphlaatrKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYT----------- 311
Cdd:cd15182 177 YCYVRILQTLMRTRTM---RKH-----------RTVKLIFVIVLVFFLSWAPYNIVIFLRSLKDLTIPIcecskqldyaf 242
                       250       260
                ....*....|....*....|....*....
gi 4885341  312 YATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15182 243 YICRNIAFSHCCLNPVFYVFVGVKFRNHL 271
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
77-340 5.10e-03

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 38.30  E-value: 5.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGeNALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVG---FLVASFA 153
Cdd:cd15421   6 LILLIFLVALTG-NALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGtqiFFFLTLG 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  154 ASVSSLLAITV-DRYLSLYNALTY---YSRRTLLgvhLLLAATWTVSLGLGLLPVLGWNCLAERAA-------CSV--VR 220
Cdd:cd15421  85 GAECLLLALMAyDRYVAICHPLRYpvlMSPRVCL---LMAAGSWLGGSLNSLIHTVYTMHFPYCGSreihhffCEVpaLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  221 PLARS------HVALLSAAFFMVFGIMLHL--YVRICQVVwrhahqialqqHCLAPPhlAATRKGVGT----LAVVLGTF 288
Cdd:cd15421 162 KLSCAdtsayeTVVYVSGVLFLLIPFSLILasYALILLTV-----------LRMRSA--EGRKKALATcsshLTVVSLYY 228
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 4885341  289 GASwlpFAIYCVVGSH----EDPAVYTYATLLPatynSMINPIIYAFRNQEIQRAL 340
Cdd:cd15421 229 GPA---IFTYMRPGSYhspeQDKVVSVFYTILT----PMLNPLIYSLRNKEVLGAL 277
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
76-340 8.57e-03

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 37.39  E-value: 8.57e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   76 DVLLCVSGtvIAGENALVVALIASTPALRTPMF-VLVGSLATADLLAGCGLILHFVFQYLVPS----ETVSLLTVGFLVA 150
Cdd:cd15002   6 LGVICLLG--FAGNLMVIGILLNNARKGKPSLIdSLILNLSAADLLLLLFSVPFRAAAYSKGSwplgWFVCKTADWFGHA 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLLAITVDRYLSLYNALTYYSR--RTLLGVhllLAATWTVSLGLGLLPVLGWNCLAERAA---CSVVRPLARS 225
Cdd:cd15002  84 CMAAKSFTIAVLAKACYMYVVNPTKQVTIkqRRITAV---VASIWVPACLLPLPQWLFRTVKQSEGVylcILCIPPLAHE 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  226 HVALLSAAFFM-VFGIMLHL----YVRICQVVWRHAHQIAlqqhclAPPHLAATRKGVGTLAVVLGTFGASWLP---FAI 297
Cdd:cd15002 161 FMSAFVKLYPLfVFCLPLTFalfyFWRAYGQCQRRGTKTQ------NLRNQIRSRKLTHMLLSVVLAFTILWLPewvAWL 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 4885341  298 YCVVGSHEDPAVY---TYATLLPATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15002 235 WLIHIKSSGSSPPqlfNVLAQLLAFSISSVNPIIFLLMSEEFREGF 280
7tmA_C3aR cd15115
complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of ...
77-335 8.71e-03

complement component 3a anaphylatoxin chemotactic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The anaphylatoxin receptors are a group of G-protein coupled receptors which bind anaphylatoxins; members of this group include C3a receptors and C5a receptors. Anaphylatoxins are also known as complement peptides (C3a, C4a and C5a) that are produced from the activation of the complement system cascade. These complement anaphylatoxins can trigger degranulation of endothelial cells, mast cells, or phagocytes, which induce a local inflammatory response and stimulate smooth muscle cell contraction, histamine release, and increased vascular permeability. They are potent mediators involved in chemotaxis, inflammation, and generation of cytotoxic oxygen-derived free radicals. In humans, a single receptor for C3a (C3AR1) and two receptors for C5a (C5AR1 and C5AR2, also known as C5L2 or GPR77) have been identified, but there is no known receptor for C4a.


Pssm-ID: 320243 [Multi-domain]  Cd Length: 265  Bit Score: 37.44  E-value: 8.71e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTVIAGENALVVaLIASTPALRTPMFVLVGSLATADLLAGCGL---ILHFVFQYLVPSETVSL-LTVGFLVASF 152
Cdd:cd15115   5 VVLSLTFLLGVPGNGLVI-WVAGLKMKRTVNTIWFLNLAVADLLCCLSLpfsIAHLLLNGHWPYGRFLCkLLPSIIVLNM 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  153 AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAE--RAACSVvRPLARSHVALL 230
Cdd:cd15115  84 FASVFTLTAISLDRFLLVIKPVWAQNHRSVLLACLLCGCIWILALLLCLPVFIYRTTVTDgnHTRCGY-DFLVAITITRA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  231 SAAFFMVFGIMLHLYVRICQVVWRHAHQialqqhclapphlAATRKGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVY 310
Cdd:cd15115 163 VFGFLLPLLIIAACYSFIAFRMQRGRFA-------------KSQSKTFRVIIAVVVAFFVCWAPYHIIGILSLYGDPPLS 229
                       250       260       270
                ....*....|....*....|....*....|.
gi 4885341  311 TYATLLP------ATYNSMINPIIYAFRNQE 335
Cdd:cd15115 230 KVLMSWDhlsialAYANSCLNPVLYVFMGKD 260
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
77-329 9.01e-03

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 37.70  E-value: 9.01e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   77 VLLCVSGTViagENALVVALIASTPALRTPMFVLVGSLATADLLAgcgLILHFVFQ-YLVPSETVSLLTVGF-----LVA 150
Cdd:cd15134   8 GIIFVTGVV---GNLCTCIVIARNRSMHTATNYYLFSLAVSDLLL---LILGLPFElYTIWQQYPWVFGEVFcklraFLS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  151 SFAASVSSLL--AITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGL------------GLLPVLGWNCLAERAAC 216
Cdd:cd15134  82 EMSSYASVLTitAFSVERYLAICHPLRSHTMSKLSRAIRIIIAIWIIAFVCalpfaiqtrivyLEYPPTSGEALEESAFC 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  217 SVVR-PLARSHVALLSAAFFMV--FGIMLHLYVRICQVVWRHAhqIALQQHCL---APPHLAATRKGVGTLAVVLGTFGA 290
Cdd:cd15134 162 AMLNeIPPITPVFQLSTFLFFIipMIAIIVLYVLIGLQLRRST--LLRRGQRSvsgGRRSSQSRRTVLRMLVAVVVAFFI 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 4885341  291 SWLPFAI---YCVVGSHEDPAVYTYATLLpaTY--------NSMINPIIY 329
Cdd:cd15134 240 CWAPFHAqrlLTVYAKNMTPPYLFINRIL--FYisgvlyyvSSTVNPILY 287
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
90-340 9.91e-03

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 37.43  E-value: 9.91e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341   90 NALVVALIASTPALRTpmFVLVGSLATADLLAGCGLI------LHFVFQYLVPSETVSLLTVGFLVASFAASVSSLLAIT 163
Cdd:cd15220  17 NTAVMVVIAKTPHLRK--FAFVCHLCVVDLLAALLLMplgilsSSPFFLGVVFGEAECRVYIFLSVCLVSASILTISAIS 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  164 VDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPVLGWNCLAERAacsvvrPLARSHVALLS--AAFFMVFGIM 241
Cdd:cd15220  95 VERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGLLPVLGWPSYGGPA------PIAARHCSLHWshSGHRGVFVVL 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4885341  242 LHLYVRICQVVwrhahqIALQQHCLAPPHLAATrKGVGTLAVVLGTFGASWLPFAIYC----VVGSHEDPAVYTYATLLP 317
Cdd:cd15220 169 FALVCFLLPLL------LILVVYCGVFKVFGGG-KAALTLAAIVGQFLCCWLPYFAFHlysaLAASPVSGGEAEEVVTWL 241
                       250       260
                ....*....|....*....|...
gi 4885341  318 ATYNSMINPIIYAFRNQEIQRAL 340
Cdd:cd15220 242 AYSCFAVNPFFYGLLNRQIREEL 264
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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