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Conserved domains on  [gi|2330050887|ref|NP_001401187|]
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zinc finger protein 40 isoform 3 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
211-609 5.06e-10

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.41  E-value: 5.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 211 KPYKCIECGKCYYHSSFEK-HYRIHSEEESYKCND--CRKSFICCLGLKRHHKIHGGERPYECKQCSKS--FYTSSHLEN 285
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTrHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLsnSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 286 HYRTHRrklhrcNECGKSLSSSSGLQRHQRIHrgekayiCAECNKCFIQKSQLKTHQRIHTGEKSYKCS-------ECEK 358
Cdd:COG5048   112 SSSSNS------NDNNLLSSHSLPPSSRDPQL-------PDLLSISNLRNNPLPGNNSSSVNTPQSNSLhpplpanSLSK 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 359 SFTVGSSLRIHQRIHTGEKPYKCSECHKCFIQQAHLRRHQKIHTGEKPYKCSECEKSFTVGSDLRMHQKIHTGEKPYKCS 438
Cdd:COG5048   179 DPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSAS 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 439 DCDKCFIQKAKLKKHQRIHTGE-------KPYKCSECEKCFTVVSDLRTHQ--KIHTGE--KPYKCSE--CDKCFIRKAN 505
Cdd:COG5048   259 ESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDA 338

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 506 LRRHHRIHTGEKPYKC--SDCGKCFIQKANLRTHERI--HTGEKPYKCECG------KSFTVGSDLRKHQKCHTGEKPY- 574
Cdd:COG5048   339 LKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETlsnsciRNFKRDSNLSLHIITHLSFRPYn 418

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2330050887 575 -KCSECNKCFIRKAHLRRHQRIHTGEKPYKCSDCGK 609
Cdd:COG5048   419 cKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
zf-H2C2_2 pfam13465
Zinc-finger double domain;
616-641 1.86e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.86e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 616 NLRTHQKIHTGEKPYKCSECDKCFIQ 641
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
644-668 4.92e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.92e-03
                          10        20
                  ....*....|....*....|....*
gi 2330050887 644 HLRTHQRLHTGEKPYKCSECEKSFT 668
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
211-609 5.06e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.41  E-value: 5.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 211 KPYKCIECGKCYYHSSFEK-HYRIHSEEESYKCND--CRKSFICCLGLKRHHKIHGGERPYECKQCSKS--FYTSSHLEN 285
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTrHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLsnSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 286 HYRTHRrklhrcNECGKSLSSSSGLQRHQRIHrgekayiCAECNKCFIQKSQLKTHQRIHTGEKSYKCS-------ECEK 358
Cdd:COG5048   112 SSSSNS------NDNNLLSSHSLPPSSRDPQL-------PDLLSISNLRNNPLPGNNSSSVNTPQSNSLhpplpanSLSK 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 359 SFTVGSSLRIHQRIHTGEKPYKCSECHKCFIQQAHLRRHQKIHTGEKPYKCSECEKSFTVGSDLRMHQKIHTGEKPYKCS 438
Cdd:COG5048   179 DPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSAS 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 439 DCDKCFIQKAKLKKHQRIHTGE-------KPYKCSECEKCFTVVSDLRTHQ--KIHTGE--KPYKCSE--CDKCFIRKAN 505
Cdd:COG5048   259 ESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDA 338

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 506 LRRHHRIHTGEKPYKC--SDCGKCFIQKANLRTHERI--HTGEKPYKCECG------KSFTVGSDLRKHQKCHTGEKPY- 574
Cdd:COG5048   339 LKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETlsnsciRNFKRDSNLSLHIITHLSFRPYn 418

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2330050887 575 -KCSECNKCFIRKAHLRRHQRIHTGEKPYKCSDCGK 609
Cdd:COG5048   419 cKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
zf-H2C2_2 pfam13465
Zinc-finger double domain;
588-613 7.99e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 7.99e-04
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 588 HLRRHQRIHTGEKPYKCSDCGKCFIQ 613
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
616-641 1.86e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.86e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 616 NLRTHQKIHTGEKPYKCSECDKCFIQ 641
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
644-668 4.92e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.92e-03
                          10        20
                  ....*....|....*....|....*
gi 2330050887 644 HLRTHQRLHTGEKPYKCSECEKSFT 668
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
211-609 5.06e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.41  E-value: 5.06e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 211 KPYKCIECGKCYYHSSFEK-HYRIHSEEESYKCND--CRKSFICCLGLKRHHKIHGGERPYECKQCSKS--FYTSSHLEN 285
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTrHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLsnSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 286 HYRTHRrklhrcNECGKSLSSSSGLQRHQRIHrgekayiCAECNKCFIQKSQLKTHQRIHTGEKSYKCS-------ECEK 358
Cdd:COG5048   112 SSSSNS------NDNNLLSSHSLPPSSRDPQL-------PDLLSISNLRNNPLPGNNSSSVNTPQSNSLhpplpanSLSK 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 359 SFTVGSSLRIHQRIHTGEKPYKCSECHKCFIQQAHLRRHQKIHTGEKPYKCSECEKSFTVGSDLRMHQKIHTGEKPYKCS 438
Cdd:COG5048   179 DPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSAS 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 439 DCDKCFIQKAKLKKHQRIHTGE-------KPYKCSECEKCFTVVSDLRTHQ--KIHTGE--KPYKCSE--CDKCFIRKAN 505
Cdd:COG5048   259 ESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDA 338

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 506 LRRHHRIHTGEKPYKC--SDCGKCFIQKANLRTHERI--HTGEKPYKCECG------KSFTVGSDLRKHQKCHTGEKPY- 574
Cdd:COG5048   339 LKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLqqYKDLKNDKKSETlsnsciRNFKRDSNLSLHIITHLSFRPYn 418

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2330050887 575 -KCSECNKCFIRKAHLRRHQRIHTGEKPYKCSDCGK 609
Cdd:COG5048   419 cKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS 454
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
323-704 1.13e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 55.09  E-value: 1.13e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 323 YICAECNKCFIQKSQLKTHQRIHTGEKSYKCS--ECEKSFTVGSSLRIHQRIHTGEKPYKCSechKCFIQQAHLRRHQKI 400
Cdd:COG5048    34 DSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNS---KSLPLSNSKASSSSL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 401 htgekpykcSECEKSFTVGSDLRMHQKIHTGEKPYKCSDCDKCFIQKAKLKKHQRIHTGEKPYKCS-------ECEKCFT 473
Cdd:COG5048   111 ---------SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQSNSLhpplpanSLSKDPS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 474 VVSDLRTHQKIHTGEKPYKCSECDKCFIRKANLRRHHRIHTGEKPYKCSDCGKCFIQKANLR-------THERIHTGEKP 546
Cdd:COG5048   182 SNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQspsslssSDSSSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 547 YKCECGKSFTVGSDLRKHQKCHTG-EKPYKCSECNKCFIRKAHLRRHQR--IHTGE--KPYKC--SDCGKCFIQKANLRT 619
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKR 341

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 620 HQKIHTGEKPYKCSEC------DKCFIQKDHLRTHQRLHTGEKPYKC---SECEKSFTGGSVLRKHQKIHTARSLTNAMN 690
Cdd:COG5048   342 HILLHTSISPAKEKLLnssskfSPLLNNEPPQSLQQYKDLKNDKKSEtlsNSCIRNFKRDSNLSLHIITHLSFRPYNCKN 421

                         410
                  ....*....|....
gi 2330050887 691 LTNPLSKKPTLELI 704
Cdd:COG5048   422 PPCSKSFNRHYNLI 435
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
377-699 1.33e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.62  E-value: 1.33e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 377 KPYKCSECHKCFIQQAHLRRHQKIHTGEKPYKCS--ECEKSFTVGSDLRMHQKIHTGEKPYKCSdcDKCFIQKAKLKKHQ 454
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSDLNS--KSLPLSNSKASSSS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 455 RIHTGEKPYKCSECEKCftVVSDLRTHQKIHTGEKPYKCSECD------KCFIRKANLRRHHRIHTGEKpykcsdCGKCF 528
Cdd:COG5048   110 LSSSSSNSNDNNLLSSH--SLPPSSRDPQLPDLLSISNLRNNPlpgnnsSSVNTPQSNSLHPPLPANSL------SKDPS 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 529 IQKANLRTHERIHTGEKPYKCECGKSFTVGSDLRKHQKCHTGEKPYKCSECNKCFIRKAHLRRHQRIHTGEKPYKCSDCG 608
Cdd:COG5048   182 SNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 609 KCFIQKANLRTHQKIHTGE-------KPYKCSECDKCFIQKDHLRTHQR--LHTGE--KPYKCSE--CEKSFTGGSVLRK 675
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKR 341

                         330       340
                  ....*....|....*....|....
gi 2330050887 676 HQKIHTARSLTNAMNLTNPLSKKP 699
Cdd:COG5048   342 HILLHTSISPAKEKLLNSSSKFSP 365
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
135-526 1.54e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 51.24  E-value: 1.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 135 HDKFFDSKHKLMIKRMCSGEKPYQCRK--CGKCFRTYSSLYRHRRTHPGEKPYKLT-ECNKSILYLSHHKVHYNIHYGEK 211
Cdd:COG5048    40 TDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSkSLPLSNSKASSSSLSSSSSNSND 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 212 PYKCiecgkCYYHSSFEKHYRIHSEEES---------YKCNDCRKSFICCLGLK-RHHKIHGGERPYECKQC----SKSF 277
Cdd:COG5048   120 NNLL-----SSHSLPPSSRDPQLPDLLSisnlrnnplPGNNSSSVNTPQSNSLHpPLPANSLSKDPSSNLSLlissNVST 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 278 YTSSHLENHYRTHRRKLHRCNECGKSLSSSSGLQRHQRIHRGEKAYICAecnkcfiQKSQLKTHQRIHTGEKSYKCSECE 357
Cdd:COG5048   195 SIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQ-------SPSSLSSSDSSSSASESPRSSLPT 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 358 KSFTVGSSLRIHQRIHTG-EKPYKCSECHKCFIQQAHLRRHQ--KIHTGE--KPYKCSE--CEKSFTVGSDLRMHQKIHT 430
Cdd:COG5048   268 ASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHT 347

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 431 GEKPYKC--SDCDKCFIQKAKLKKHQRIH-----TGEKPYKCSECEKCFTVVSD----LRTHQKIHTGEKPYKCSECDKC 499
Cdd:COG5048   348 SISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLSNSCIRNFKRDsnlsLHIITHLSFRPYNCKNPPCSKS 427

                         410       420
                  ....*....|....*....|....*..
gi 2330050887 500 FIRKANLRRHHRIHTGEKPYKCSDCGK 526
Cdd:COG5048   428 FNRHYNLIPHKKIHTNHAPLLCSILKS 454
zf-H2C2_2 pfam13465
Zinc-finger double domain;
588-613 7.99e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 7.99e-04
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 588 HLRRHQRIHTGEKPYKCSDCGKCFIQ 613
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
393-417 8.07e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 8.07e-04
                          10        20
                  ....*....|....*....|....*
gi 2330050887 393 HLRRHQKIHTGEKPYKCSECEKSFT 417
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
505-530 1.39e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.39e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 505 NLRRHHRIHTGEKPYKCSDCGKCFIQ 530
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
616-641 1.86e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.86e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 616 NLRTHQKIHTGEKPYKCSECDKCFIQ 641
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 431-514 2.05e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 41.24  E-value: 2.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 431 GEKPYKCS--DCDKCFIQKAKLKKHqRIHtgekpykcSECEKCFTVVSDLRTHQKIHTGEKPYKCSECDKCFiRKANLRR 508
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYH-MLH--------GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRY-KNLNGLK 415


                  ....*.
gi 2330050887 509 HHRIHT 514
Cdd:COG5189   416 YHRKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
477-502 4.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.16e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 477 DLRTHQKIHTGEKPYKCSECDKCFIR 502
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
644-668 4.92e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.92e-03
                          10        20
                  ....*....|....*....|....*
gi 2330050887 644 HLRTHQRLHTGEKPYKCSECEKSFT 668
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
421-446 5.02e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 5.02e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 421 DLRMHQKIHTGEKPYKCSDCDKCFIQ 446
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
450-473 5.12e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 5.12e-03
                          10        20
                  ....*....|....*....|....
gi 2330050887 450 LKKHQRIHTGEKPYKCSECEKCFT 473
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
365-390 5.87e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 5.87e-03
                          10        20
                  ....*....|....*....|....*.
gi 2330050887 365 SLRIHQRIHTGEKPYKCSECHKCFIQ 390
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 403-483 9.75e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.93  E-value: 9.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2330050887 403 GEKPYKCS--ECEKSFTVGSDLRMHQKI-HTGEKPYKCSDCDKcfiqkaklkkHQRIHTGEKPYKCSECEKCFTVVSDLR 479
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHMLHgHQNQKLHENPSPEK----------MNIFSAKDKPYRCEVCDKRYKNLNGLK 415


                  ....
gi 2330050887 480 THQK 483
Cdd:COG5189   416 YHRK 419
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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