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Conserved domains on  [gi|428755338|ref|NP_001258804|]
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CUE domain-containing protein 1 [Homo sapiens]

Protein Classification

CUE domain-containing protein 1( domain architecture ID 10198889)

CUE domain-containing protein 1 (CUEDC1) is a primary target of ERa essential for the growth of breast cancer cells

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CUE_CUED1 cd14366
CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The ...
46-87 2.17e-22

CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The subfamily includes a group of uncharacterized CUE domain-containing protein termed CUED1. Their biological function remains unknown.


:

Pssm-ID: 270549  Cd Length: 42  Bit Score: 88.82  E-value: 2.17e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 428755338  46 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 87
Cdd:cd14366    1 EFEQAMEDLKTMFPNMDREVIEAVLRANNGHVEATIDQLLAM 42
 
Name Accession Description Interval E-value
CUE_CUED1 cd14366
CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The ...
46-87 2.17e-22

CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The subfamily includes a group of uncharacterized CUE domain-containing protein termed CUED1. Their biological function remains unknown.


Pssm-ID: 270549  Cd Length: 42  Bit Score: 88.82  E-value: 2.17e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 428755338  46 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 87
Cdd:cd14366    1 EFEQAMEDLKTMFPNMDREVIEAVLRANNGHVEATIDQLLAM 42
CUE smart00546
Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs); CUE domains also ...
46-88 1.31e-14

Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs); CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)


Pssm-ID: 214715  Cd Length: 43  Bit Score: 67.13  E-value: 1.31e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 428755338    46 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 88
Cdd:smart00546   1 ENDEALHDLKEMFPNLDEEVIEAVLEANTGNVEATINNLLEGS 43
CUE pfam02845
CUE domain; CUE domains have been shown to bind ubiquitin. It has been suggested that CUE ...
47-88 1.74e-11

CUE domain; CUE domains have been shown to bind ubiquitin. It has been suggested that CUE domains are related to pfam00627 and this has been confirmed by the structure of the domain. CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2.


Pssm-ID: 427018  Cd Length: 42  Bit Score: 58.26  E-value: 1.74e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 428755338   47 FNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 88
Cdd:pfam02845   1 NEQMLETLKEMFPDLDEEVIRAVLEASNGNVEAAINALLEGS 42
 
Name Accession Description Interval E-value
CUE_CUED1 cd14366
CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The ...
46-87 2.17e-22

CUE domain found in CUE domain-containing protein 1 (CUED1) and similar proteins; The subfamily includes a group of uncharacterized CUE domain-containing protein termed CUED1. Their biological function remains unknown.


Pssm-ID: 270549  Cd Length: 42  Bit Score: 88.82  E-value: 2.17e-22
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 428755338  46 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 87
Cdd:cd14366    1 EFEQAMEDLKTMFPNMDREVIEAVLRANNGHVEATIDQLLAM 42
CUE smart00546
Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs); CUE domains also ...
46-88 1.31e-14

Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs); CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2. Ponting (Biochem. J.) "Proteins of the Endoplasmic reticulum" (in press)


Pssm-ID: 214715  Cd Length: 43  Bit Score: 67.13  E-value: 1.31e-14
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 428755338    46 EFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 88
Cdd:smart00546   1 ENDEALHDLKEMFPNLDEEVIEAVLEANTGNVEATINNLLEGS 43
CUE pfam02845
CUE domain; CUE domains have been shown to bind ubiquitin. It has been suggested that CUE ...
47-88 1.74e-11

CUE domain; CUE domains have been shown to bind ubiquitin. It has been suggested that CUE domains are related to pfam00627 and this has been confirmed by the structure of the domain. CUE domains also occur in two protein of the IL-1 signal transduction pathway, tollip and TAB2.


Pssm-ID: 427018  Cd Length: 42  Bit Score: 58.26  E-value: 1.74e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 428755338   47 FNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMN 88
Cdd:pfam02845   1 NEQMLETLKEMFPDLDEEVIRAVLEASNGNVEAAINALLEGS 42
CUE cd14279
CUE domain found in ubiquitin-binding CUE proteins; This family includes many coupling of ...
48-85 7.97e-09

CUE domain found in ubiquitin-binding CUE proteins; This family includes many coupling of ubiquitin conjugation to endoplasmic reticulum degradation (CUE) domain containing proteins that are characterized by an FP and a di-leucine-like sequence and bind to monoubiquitin with varying affinities. Some higher eukaryotic CUE domain proteins do not bind monoubiquitin efficiently, since they carry LP, rather than FP among CUE domains. CUE domains form three-helix bundle structures and are distantly related to the ubiquitin-associated (UBA) domains which are widely occurring ubiquitin-binding motifs found in a broad range of cellular proteins in species ranging from yeast to human. The majority of family members contain one CUE domain, but some family members from fungi harbor two CUE domains.


Pssm-ID: 270465  Cd Length: 38  Bit Score: 50.93  E-value: 7.97e-09
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 428755338  48 NQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLL 85
Cdd:cd14279    1 DEKLEQLQEMFPDLDEEVLEDVLEANNGDVEAAIDALL 38
CUE_TOLIP cd14363
CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins; ...
52-87 1.24e-08

CUE domain found in the C-terminal of toll-interacting protein (Tollip) and similar proteins; Tollip is a new component of the IL-1RI pathway which contains an N-terminal C2 domain and a C-terminal CUE domain. Tollip binds to the cytoplasmic TIR domain of IL-1Rs after IL-1 stimulation. It is sufficient for recruitment of IRAK to IL-1Rs and negatively regulates IL-1-induced signaling by inhibiting IRAK phosphorylation. In addition, Tollip directly interacts with toll-like receptors TLR2 and TLR4, and plays an inhibitory role in TLR-mediated cell activation through suppressing phosphorylation and kinase activity of IRAK. Moreover, Tollip can associate with GAT domains of Tom1 and its related proteins Tom1L1 and Tom1L2, and facilitate the recruitment of clathrin onto endosomes.


Pssm-ID: 270546  Cd Length: 41  Bit Score: 50.40  E-value: 1.24e-08
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 428755338  52 DDFKT---MFPNMDYDIIECVLRANSGAVDATIDQLLQM 87
Cdd:cd14363    3 EDLKQiqeMFPNVDKEVIKSVLEANRGNKDAAINSLLQM 41
CUE_VPS9_like cd14369
CUE domain found in vacuolar protein sorting-associated protein 9 (VPS9) and similar proteins; ...
50-87 2.42e-06

CUE domain found in vacuolar protein sorting-associated protein 9 (VPS9) and similar proteins; VPS9, also called vacuolar protein-targeting protein 9, is a cytosolic yeast protein required for localization of vacuolar proteins, such as the soluble vacuolar hydrolases CPY and PrA. It may bind and act as an effector of a rab GTPase and plays a role in vacuolar protein sorting (VPS) pathway. VPS9 contains a region called GBH domain that is related to mammalian Ras-binding proteins, Rin1 and JC265, and may negatively regulate Ras-mediated signaling in yeast Saccharomyces cerevisiae. This model corresponds to the N-terminal CUE domain that interacts specifically with monoubiquitin and regulates intramolecular monoubiquitylation.


Pssm-ID: 270552  Cd Length: 42  Bit Score: 43.75  E-value: 2.42e-06
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 428755338  50 AMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQM 87
Cdd:cd14369    5 TLNTLQEMFPDLDKEIIKDVVIAKKGRIGECVDACLQL 42
CUE_CID7_like cd14371
CUE domain found in CTC-interacting domain proteins CID5, CID6, CID7 and similar proteins; ...
55-90 2.42e-04

CUE domain found in CTC-interacting domain proteins CID5, CID6, CID7 and similar proteins; CID7 is encoded by ubiquitously expressed gene CID7. It contains an N-terminal PABC-interacting domain (PAM2 or PABP-interacting motif 2) which is also found in the human Paip1 and Paip2. At this point, it functions as an interaction partner of the PABC domain of Arabidopsis thaliana Poly(A)-binding proteins. It also harbors an ubiquitin-associated (UBA)-like CUE domain and a C-terminal small MutS-related (SMR) domain. CID5 and CID6 are encoded by gene CID5, CID6, respectively. CID5 is only expressed in immature siliques. The biological function of CID5 and CID6 remain unclear.


Pssm-ID: 270554  Cd Length: 43  Bit Score: 38.39  E-value: 2.42e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 428755338  55 KTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLE 90
Cdd:cd14371    8 SSMFPGVSADSIAEVYEANGGDLDLTIDMLTQLESQ 43
CUE2_Cue2p_like cd14375
CUE2 domain found in yeast ubiquitin-binding protein CUE2 (Cue2p) and similar proteins; Cue2p, ...
51-85 1.62e-03

CUE2 domain found in yeast ubiquitin-binding protein CUE2 (Cue2p) and similar proteins; Cue2p, also called coupling of ubiquitin conjugation to ER degradation protein 2, is encoded by the open reading frame (ORF) YKL090W. It is involved in the intramolecular monoubiquitination that serves as a regulatory signal in a variety of cellular processes in yeast. Cue2p contains two tandem CUE domains at the N-terminus. Both of them can bind monoubiquitin independently. This model corresponds to the second CUE domain.


Pssm-ID: 270558  Cd Length: 38  Bit Score: 35.86  E-value: 1.62e-03
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 428755338  51 MDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLL 85
Cdd:cd14375    4 LDELKDMFPNLDSEVIEDCYVLCEKNVERTVSALL 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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