NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|270288792|ref|NP_001161877|]
View 

ankyrin repeat domain-containing protein 55 isoform 4 [Mus musculus]

Protein Classification

ankyrin repeat domain-containing protein( domain architecture ID 13328237)

ankyrin (ANK) repeat domain-containing protein may be involved in mediating protein-protein interactions

Gene Ontology:  GO:0005515
PubMed:  17176038

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-148 7.24e-21

Ankyrin repeat [Signal transduction mechanisms];


:

Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 88.09  E-value: 7.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666  150 DNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAEN 229

                         90
                 ....*....|..
gi 270288792 137 PDVRLLIVLLQQ 148
Cdd:COG0666  230 GNLEIVKLLLEA 241
PLN03192 super family cl33658
Voltage-dependent potassium channel; Provisional
 18-204 5.39e-07

Voltage-dependent potassium channel; Provisional


The actual alignment was detected with superfamily member PLN03192:

Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 49.48  E-value: 5.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  18 KGDSSEE-VDLAM---VYQAASNGDVNSLTSVIR--EDPSIlecCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDA 91
Cdd:PLN03192 513 LGDNGGEhDDPNMasnLLTVASTGNAALLEELLKakLDPDI---GDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDA 589

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  92 YGRTS-------------------------------LCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVR 140
Cdd:PLN03192 590 NGNTAlwnaisakhhkifrilyhfasisdphaagdlLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVD 669

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270288792 141 LLIVLLQQSSLSEINHQDTELSPLECFR---------GPTKPSREPRTQTVGKADEGSH---LTSNGFHTSCVPEI 204
Cdd:PLN03192 670 MVRLLIMNGADVDKANTDDDFSPTELREllqkrelghSITIVDSVPADEPDLGRDGGSRpgrLQGTSSDNQCRPRV 745
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-148 7.24e-21

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 88.09  E-value: 7.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666  150 DNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAEN 229

                         90
                 ....*....|..
gi 270288792 137 PDVRLLIVLLQQ 148
Cdd:COG0666  230 GNLEIVKLLLEA 241
Ank_2 pfam12796
Ankyrin repeats (3 copies);
32-123 8.93e-13

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 62.06  E-value: 8.93e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792   32 QAASNGDVNSLTSVIREDPSIlECCDSEGCTPLMHAVSGRQVDTVKLLLKmGANINTQDaYGRTSLCLATYLGWLEGCVS 111
Cdd:pfam12796   3 LAAKNGNLELVKLLLENGADA-NLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYAARSGHLEIVKL 79

                          90
                  ....*....|..
gi 270288792  112 LLRNGAKHNIPD 123
Cdd:pfam12796  80 LLEKGADINVKD 91
PHA03095 PHA03095
ankyrin-like protein; Provisional
 20-143 3.88e-09

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 55.80  E-value: 3.88e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  20 DSSEEVDLAMVYQAASNGDVNSLTSVIREDPSIlECCDSEGCTPL---MHAVSGRQVDTVKLLLKMGANINTQDAYGRTS 96
Cdd:PHA03095   8 DIIMEAALYDYLLNASNVTVEEVRRLLAAGADV-NFRGEYGKTPLhlyLHYSSEKVKDIVRLLLEAGADVNAPERCGFTP 86

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 270288792  97 LCLATYLGWLEGCVSLL-RNGAKHNIPDKNGRLPLHA-----ATAEPDVRLLI 143
Cdd:PHA03095  87 LHLYLYNATTLDVIKLLiKAGADVNAKDKVGRTPLHVylsgfNINPKVIRLLL 139
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
 18-204 5.39e-07

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 49.48  E-value: 5.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  18 KGDSSEE-VDLAM---VYQAASNGDVNSLTSVIR--EDPSIlecCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDA 91
Cdd:PLN03192 513 LGDNGGEhDDPNMasnLLTVASTGNAALLEELLKakLDPDI---GDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDA 589

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  92 YGRTS-------------------------------LCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVR 140
Cdd:PLN03192 590 NGNTAlwnaisakhhkifrilyhfasisdphaagdlLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVD 669

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270288792 141 LLIVLLQQSSLSEINHQDTELSPLECFR---------GPTKPSREPRTQTVGKADEGSH---LTSNGFHTSCVPEI 204
Cdd:PLN03192 670 MVRLLIMNGADVDKANTDDDFSPTELREllqkrelghSITIVDSVPADEPDLGRDGGSRpgrLQGTSSDNQCRPRV 745
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 59-87 7.36e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 41.42  E-value: 7.36e-06
                           10        20
                   ....*....|....*....|....*....
gi 270288792    59 EGCTPLMHAVSGRQVDTVKLLLKMGANIN 87
Cdd:smart00248   1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
 
Name Accession Description Interval E-value
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-148 7.24e-21

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 88.09  E-value: 7.24e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666  150 DNDGNTPLHLAAANGNLEIVKLLLEAGADVNARDNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAEN 229

                         90
                 ....*....|..
gi 270288792 137 PDVRLLIVLLQQ 148
Cdd:COG0666  230 GNLEIVKLLLEA 241
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
31-143 7.93e-21

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 88.09  E-value: 7.93e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  31 YQAASNGDVNSLTSVIREDPSIlECCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCV 110
Cdd:COG0666   92 HAAARNGDLEIVKLLLEAGADV-NARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAANGNLEIVK 170

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 270288792 111 SLLRNGAKHNIPDKNGRLPLHAATAEPD---VRLLI 143
Cdd:COG0666  171 LLLEAGADVNARDNDGETPLHLAAENGHleiVKLLL 206
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-143 2.66e-19

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 83.85  E-value: 2.66e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666   84 DDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYNGNLEIVKLLLEAGADVNAQDNDGNTPLHLAAAN 163

                         90
                 ....*....|
gi 270288792 137 PD---VRLLI 143
Cdd:COG0666  164 GNleiVKLLL 173
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-158 1.17e-16

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 76.53  E-value: 1.17e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666  183 DNDGETPLHLAAENGHLEIVKLLLEAGADVNAKDNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAA 262

                         90       100
                 ....*....|....*....|..
gi 270288792 137 PDVRLLIVLLQQSSLSEINHQD 158
Cdd:COG0666  263 GAALIVKLLLLALLLLAAALLD 284
Ank_2 pfam12796
Ankyrin repeats (3 copies);
32-123 8.93e-13

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 62.06  E-value: 8.93e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792   32 QAASNGDVNSLTSVIREDPSIlECCDSEGCTPLMHAVSGRQVDTVKLLLKmGANINTQDaYGRTSLCLATYLGWLEGCVS 111
Cdd:pfam12796   3 LAAKNGNLELVKLLLENGADA-NLQDKNGRTALHLAAKNGHLEIVKLLLE-HADVNLKD-NGRTALHYAARSGHLEIVKL 79

                          90
                  ....*....|..
gi 270288792  112 LLRNGAKHNIPD 123
Cdd:pfam12796  80 LLEKGADINVKD 91
Ank_2 pfam12796
Ankyrin repeats (3 copies);
64-158 5.97e-12

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 59.74  E-value: 5.97e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792   64 LMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEgCVSLLRNGAKHNIPDkNGRLPLHAATA---EPDVR 140
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLE-IVKLLLEHADVNLKD-NGRTALHYAARsghLEIVK 78

                          90
                  ....*....|....*...
gi 270288792  141 LLIvllqqSSLSEINHQD 158
Cdd:pfam12796  79 LLL-----EKGADINVKD 91
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-164 5.26e-10

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 58.04  E-value: 5.26e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:COG0666   51 DALGALLLLAAALAGDLLVALLLLAAGADINAKDDGGNTLLHAAARNGDLEIVKLLLEAGADVNARDKDGETPLHLAAYN 130

                         90       100
                 ....*....|....*....|....*....
gi 270288792 137 PDVRLLIVLLQQSslSEINHQDTE-LSPL 164
Cdd:COG0666  131 GNLEIVKLLLEAG--ADVNAQDNDgNTPL 157
PHA03095 PHA03095
ankyrin-like protein; Provisional
 20-143 3.88e-09

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 55.80  E-value: 3.88e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  20 DSSEEVDLAMVYQAASNGDVNSLTSVIREDPSIlECCDSEGCTPL---MHAVSGRQVDTVKLLLKMGANINTQDAYGRTS 96
Cdd:PHA03095   8 DIIMEAALYDYLLNASNVTVEEVRRLLAAGADV-NFRGEYGKTPLhlyLHYSSEKVKDIVRLLLEAGADVNAPERCGFTP 86

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 270288792  97 LCLATYLGWLEGCVSLL-RNGAKHNIPDKNGRLPLHA-----ATAEPDVRLLI 143
Cdd:PHA03095  87 LHLYLYNATTLDVIKLLiKAGADVNAKDKVGRTPLHVylsgfNINPKVIRLLL 139
PHA03095 PHA03095
ankyrin-like protein; Provisional
 57-143 3.71e-08

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 52.72  E-value: 3.71e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  57 DSEGCTPL-MHAVSGRQVDTVKLLLKMGANINTQDAYGRTSlcLATYLG--WLEGCV--SLLRNGAKHNIPDKNGRLPLH 131
Cdd:PHA03095  80 ERCGFTPLhLYLYNATTLDVIKLLIKAGADVNAKDKVGRTP--LHVYLSgfNINPKVirLLLRKGADVNALDLYGMTPLA 157

                         90
                 ....*....|....*...
gi 270288792 132 A------ATAEPdVRLLI 143
Cdd:PHA03095 158 VllksrnANVEL-LRLLI 174
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 74-164 4.32e-08

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 52.66  E-value: 4.32e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  74 DTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIVLLQQSSLSE 153
Cdd:PHA02874 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184

                         90
                 ....*....|.
gi 270288792 154 INHQDTElSPL 164
Cdd:PHA02874 185 VKDNNGE-SPL 194
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 51-150 2.50e-07

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 50.35  E-value: 2.50e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  51 SILECC------DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDK 124
Cdd:PHA02874 109 TILDCGidvnikDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDN 188

                         90       100
                 ....*....|....*....|....*.
gi 270288792 125 NGRLPLHAATAEPDVRLLIVLLQQSS 150
Cdd:PHA02874 189 NGESPLHNAAEYGDYACIKLLIDHGN 214
Ank_2 pfam12796
Ankyrin repeats (3 copies);
31-90 3.30e-07

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 46.65  E-value: 3.30e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 270288792   31 YQAASNGDVNsltsVIREdpsILECCD----SEGCTPLMHAVSGRQVDTVKLLLKMGANINTQD 90
Cdd:pfam12796  35 HLAAKNGHLE----IVKL---LLEHADvnlkDNGRTALHYAARSGHLEIVKLLLEKGADINVKD 91
PLN03192 PLN03192
Voltage-dependent potassium channel; Provisional
 18-204 5.39e-07

Voltage-dependent potassium channel; Provisional


Pssm-ID: 215625 [Multi-domain]  Cd Length: 823  Bit Score: 49.48  E-value: 5.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  18 KGDSSEE-VDLAM---VYQAASNGDVNSLTSVIR--EDPSIlecCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDA 91
Cdd:PLN03192 513 LGDNGGEhDDPNMasnLLTVASTGNAALLEELLKakLDPDI---GDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDA 589

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  92 YGRTS-------------------------------LCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVR 140
Cdd:PLN03192 590 NGNTAlwnaisakhhkifrilyhfasisdphaagdlLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVD 669

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270288792 141 LLIVLLQQSSLSEINHQDTELSPLECFR---------GPTKPSREPRTQTVGKADEGSH---LTSNGFHTSCVPEI 204
Cdd:PLN03192 670 MVRLLIMNGADVDKANTDDDFSPTELREllqkrelghSITIVDSVPADEPDLGRDGGSRpgrLQGTSSDNQCRPRV 745
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 21-149 2.11e-06

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 47.74  E-value: 2.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  21 SSEEVDLAMVYQAASNG-DVNSLTSV---IREDPSILECcDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTS 96
Cdd:PHA03100 150 ESNKIDLKILKLLIDKGvDINAKNRVnylLSYGVPINIK-DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTP 228

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 270288792  97 LCLATYLGWLEGCVSLLRNGAkhNIPDKNGRLPLHAATaEPDVRLLIVLLQQS 149
Cdd:PHA03100 229 LHIAILNNNKEIFKLLLNNGP--SIKTIIETLLYFKDK-DLNTITKIKMLKKS 278
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 61-133 3.14e-06

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 46.97  E-value: 3.14e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270288792  61 CTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVS-----LLRNGAKHNIPDKNGRLPLHAA 133
Cdd:PHA03100  36 VLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKeivklLLEYGANVNAPDNNGITPLLYA 113
Ank_5 pfam13857
Ankyrin repeats (many copies);
46-100 5.41e-06

Ankyrin repeats (many copies);


Pssm-ID: 433530 [Multi-domain]  Cd Length: 56  Bit Score: 42.33  E-value: 5.41e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 270288792   46 IREDPSILECCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLA 100
Cdd:pfam13857   2 LEHGPIDLNRLDGEGYTPLHVAAKYGALEIVRVLLAYGVDLNLKDEEGLTALDLA 56
ANK smart00248
ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four ...
 59-87 7.36e-06

ankyrin repeats; Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.


Pssm-ID: 197603 [Multi-domain]  Cd Length: 30  Bit Score: 41.42  E-value: 7.36e-06
                           10        20
                   ....*....|....*....|....*....
gi 270288792    59 EGCTPLMHAVSGRQVDTVKLLLKMGANIN 87
Cdd:smart00248   1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 49-164 8.82e-06

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 45.64  E-value: 8.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  49 DPSILECCDSegcTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLAT-YLGWLEGCVSLLRNGAKHNIPDK-NG 126
Cdd:PHA02878 193 NVNIPDKTNN---SPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVgYCKDYDILKLLLEHGVDVNAKSYiLG 269

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 270288792 127 RLPLHAATAEPDVrlLIVLLQQSslSEINHQDTE-LSPL 164
Cdd:PHA02878 270 LTALHSSIKSERK--LKLLLEYG--ADINSLNSYkLTPL 304
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 30-146 9.38e-06

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 45.75  E-value: 9.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  30 VYQAASNGDVNSLTSVIREDPSILECCDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGC 109
Cdd:PHA02875  72 LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGI 151

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 270288792 110 VSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIVLL 146
Cdd:PHA02875 152 ELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLL 188
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 44-143 1.24e-05

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 45.43  E-value: 1.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  44 SVIREDPSILE----------CCDSEGCTPLMHAVSGR--QVDTVKLLLKMGANINTQDAYGRTSLCLAtylgwLEGCV- 110
Cdd:PHA03100  80 YNLTDVKEIVKllleyganvnAPDNNGITPLLYAISKKsnSYSIVEYLLDNGANVNIKNSDGENLLHLY-----LESNKi 154

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 270288792 111 ----------------------SLLRNGAKHNIPDKNGRLPLHAATAEPD---VRLLI 143
Cdd:PHA03100 155 dlkilkllidkgvdinaknrvnYLLSYGVPINIKDVYGFTPLHYAVYNNNpefVKYLL 212
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 62-143 1.45e-05

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 44.98  E-value: 1.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  62 TPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE---PD 138
Cdd:PHA02875 137 SPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIEnnkID 216


                 ....*.
gi 270288792 139 -VRLLI 143
Cdd:PHA02875 217 iVRLFI 222
PHA03100 PHA03100
ankyrin repeat protein; Provisional
 67-144 2.55e-05

ankyrin repeat protein; Provisional


Pssm-ID: 222984 [Multi-domain]  Cd Length: 422  Bit Score: 44.27  E-value: 2.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  67 AVSGRQVDTVKLLLKMGANINTQDAYGRTSL--CLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIV 144
Cdd:PHA03100  80 YNLTDVKEIVKLLLEYGANVNAPDNNGITPLlyAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKIL 159
Ank pfam00023
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 59-90 3.27e-05

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.


Pssm-ID: 459634 [Multi-domain]  Cd Length: 34  Bit Score: 39.97  E-value: 3.27e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 270288792   59 EGCTPLMHAV-SGRQVDTVKLLLKMGANINTQD 90
Cdd:pfam00023   1 DGNTPLHLAAgRRGNLEIVKLLLSKGADVNARD 33
PTZ00322 PTZ00322
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
 49-169 3.52e-05

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional


Pssm-ID: 140343 [Multi-domain]  Cd Length: 664  Bit Score: 44.12  E-value: 3.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  49 DPSILECCDSEGCTplmHAVSGRQVDtVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRL 128
Cdd:PTZ00322  75 DPVVAHMLTVELCQ---LAASGDAVG-ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKT 150

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 270288792 129 PLHAAtAEPDVRLLIVLLqqSSLSEINHQDTELSPLECFRG 169
Cdd:PTZ00322 151 PLELA-EENGFREVVQLL--SRHSQCHFELGANAKPDSFTG 188
PHA02874 PHA02874
ankyrin repeat protein; Provisional
 30-146 4.88e-05

ankyrin repeat protein; Provisional


Pssm-ID: 165205 [Multi-domain]  Cd Length: 434  Bit Score: 43.41  E-value: 4.88e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  30 VYQAASNGDVNSLTSVI--REDPSILeccDSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSL---------- 97
Cdd:PHA02874 128 LHYAIKKGDLESIKMLFeyGADVNIE---DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLhnaaeygdya 204

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 270288792  98 ---------------C------LATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEP-DVRLLIVLL 146
Cdd:PHA02874 205 cikllidhgnhimnkCkngftpLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPcDIDIIDILL 275
ANKYR COG0666
Ankyrin repeat [Signal transduction mechanisms];
57-130 8.33e-05

Ankyrin repeat [Signal transduction mechanisms];


Pssm-ID: 440430 [Multi-domain]  Cd Length: 289  Bit Score: 42.63  E-value: 8.33e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 270288792  57 DSEGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPL 130
Cdd:COG0666  216 DNDGKTALDLAAENGNLEIVKLLLEAGADLNAKDKDGLTALLLAAAAGAALIVKLLLLALLLLAAALLDLLTLL 289
Ank_4 pfam13637
Ankyrin repeats (many copies);
62-113 8.36e-05

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 39.18  E-value: 8.36e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 270288792   62 TPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEgCVSLL 113
Cdd:pfam13637   3 TALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVE-VLKLL 53
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 33-123 9.97e-05

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 42.67  E-value: 9.97e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  33 AASNGDVNSLTSVI--REDPSILECCdseGCTPLMHAVSGRQVDTVKLLLKMGANINtqdaygrtslclatYLGwLEGCV 110
Cdd:PHA02875 142 AVMMGDIKGIELLIdhKACLDIEDCC---GCTPLIIAMAKGDIAICKMLLDSGANID--------------YFG-KNGCV 203

                         90
                 ....*....|...
gi 270288792 111 SLLRNGAKHNIPD 123
Cdd:PHA02875 204 AALCYAIENNKID 216
Ank_2 pfam12796
Ankyrin repeats (3 copies);
97-159 1.37e-04

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 39.71  E-value: 1.37e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 270288792   97 LCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIVLLQQSSLSEINHQDT 159
Cdd:pfam12796   1 LHLAAKNGNLELVKLLLENGADANLQDKNGRTALHLAAKNGHLEIVKLLLEHADVNLKDNGRT 63
Ank_3 pfam13606
Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the ...
 59-88 1.96e-04

Ankyrin repeat; Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities.


Pssm-ID: 463933 [Multi-domain]  Cd Length: 30  Bit Score: 37.62  E-value: 1.96e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 270288792   59 EGCTPLMHAVSGRQVDTVKLLLKMGANINT 88
Cdd:pfam13606   1 DGNTPLHLAARNGRLEIVKLLLENGADINA 30
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 62-154 3.43e-04

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 40.74  E-value: 3.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  62 TPLMHAVSGRQVDTVKLLLKMGANINtqDAY---GRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPD 138
Cdd:PHA02875  70 SELHDAVEEGDVKAVEELLDLGKFAD--DVFykdGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGD 147

                         90
                 ....*....|....*.
gi 270288792 139 VRLLIVLLQQSSLSEI 154
Cdd:PHA02875 148 IKGIELLIDHKACLDI 163
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 60-164 9.88e-04

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 39.48  E-value: 9.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  60 GCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE-PD 138
Cdd:PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYcKD 247

                         90       100
                 ....*....|....*....|....*.
gi 270288792 139 VRLLIVLLQQSSLSEINHQDTELSPL 164
Cdd:PHA02878 248 YDILKLLLEHGVDVNAKSYILGLTAL 273
PHA02878 PHA02878
ankyrin repeat protein; Provisional
 76-158 1.43e-03

ankyrin repeat protein; Provisional


Pssm-ID: 222939 [Multi-domain]  Cd Length: 477  Bit Score: 39.09  E-value: 1.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  76 VKLLLKMGANINTQDAY-GRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIVLLQQSslSEI 154
Cdd:PHA02878 150 TKLLLSYGADINMKDRHkGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG--AST 227


                 ....
gi 270288792 155 NHQD 158
Cdd:PHA02878 228 DARD 231
PHA03095 PHA03095
ankyrin-like protein; Provisional
 46-154 2.59e-03

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 38.47  E-value: 2.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  46 IREDPSILECCDSEGCTPLMHAVSG-------------RQVDTVKLLLKmGANINTQDAYGRTSLCLATYLGWLEGCVSL 112
Cdd:PHA03095 198 FKPRARIVRELIRAGCDPAATDMLGntplhsmatgsscKRSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRL 276

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 270288792 113 LRNGAKHNIPDKNGRLPLHAATAEPDVRLL-IVLLQQSSLSEI 154
Cdd:PHA03095 277 IALGADINAVSSDGNTPLSLMVRNNNGRAVrAALAKNPSAETV 319
PHA02798 PHA02798
ankyrin-like protein; Provisional
 57-126 2.64e-03

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 38.28  E-value: 2.64e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 270288792  57 DSEGCTPLMHAVSG-----RQVDTVKLLLKMGANINTQDAYGRTSLCLA---TYLGWLEGCVSLLRNGAKHNIPDKNG 126
Cdd:PHA02798  68 DNEYSTPLCTILSNikdykHMLDIVKILIENGADINKKNSDGETPLYCLlsnGYINNLEILLFMIENGADTTLLDKDG 145
Ank_4 pfam13637
Ankyrin repeats (many copies);
93-146 3.15e-03

Ankyrin repeats (many copies);


Pssm-ID: 372654 [Multi-domain]  Cd Length: 54  Bit Score: 34.94  E-value: 3.15e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 270288792   93 GRTSLCLATYLGWLEGCVSLLRNGAKHNIPDKNGRLPLHAATAEPDVRLLIVLL 146
Cdd:pfam13637   1 ELTALHAAAASGHLELLRLLLEKGADINAVDGNGETALHFAASNGNVEVLKLLL 54
PHA02798 PHA02798
ankyrin-like protein; Provisional
 73-130 3.20e-03

ankyrin-like protein; Provisional


Pssm-ID: 222931 [Multi-domain]  Cd Length: 489  Bit Score: 37.89  E-value: 3.20e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 270288792  73 VDTVKLLLKMGANINTQDAYGRTSLC-----LATYLGWLEGCVSLLRNGAKHNIPDKNGRLPL 130
Cdd:PHA02798  51 TDIVKLFINLGANVNGLDNEYSTPLCtilsnIKDYKHMLDIVKILIENGADINKKNSDGETPL 113
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 26-147 4.16e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 37.74  E-value: 4.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  26 DLAMVyQAASNGDVNslTSVIREDPSI-LECCDSEGCTPLMHAVSGRQVDT-VKLLLKMGANINTQDAYGRTSLCLATYL 103
Cdd:PHA02876 241 DLSLL-KAIRNEDLE--TSLLLYDAGFsVNSIDDCKNTPLHHASQAPSLSRlVPKLLERGADVNAKNIKGETPLYLMAKN 317

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 270288792 104 GW-LEGCVSLLRNGAKHNIPDKNGRLPLH-AATAEPDVRLLIVLLQ 147
Cdd:PHA02876 318 GYdTENIRTLIMLGADVNAADRLYITPLHqASTLDRNKDIVITLLE 363
PHA03095 PHA03095
ankyrin-like protein; Provisional
 56-145 5.35e-03

ankyrin-like protein; Provisional


Pssm-ID: 222980 [Multi-domain]  Cd Length: 471  Bit Score: 37.31  E-value: 5.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  56 CDSEGCTPLMHAVSGRQVD--TVKLLLKMGANINTQDAYGRTSL-CLATYLGWLEGCVS-LLRNGAKHNIPDKNGRLPLH 131
Cdd:PHA03095 148 LDLYGMTPLAVLLKSRNANveLLRLLIDAGADVYAVDDRFRSLLhHHLQSFKPRARIVReLIRAGCDPAATDMLGNTPLH 227

                         90
                 ....*....|....
gi 270288792 132 AATAEPDVRLLIVL 145
Cdd:PHA03095 228 SMATGSSCKRSLVL 241
PHA02875 PHA02875
ankyrin repeat protein; Provisional
 59-164 5.79e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165206 [Multi-domain]  Cd Length: 413  Bit Score: 37.28  E-value: 5.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  59 EGCTPLMHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLGWLEGCVSLLRNGAKHN-IPDKNGRLPLHAATAEP 137
Cdd:PHA02875  34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADdVFYKDGMTPLHLATILK 113

                         90       100
                 ....*....|....*....|....*..
gi 270288792 138 DVRLLIVLLQQSSLSEINHQDtELSPL 164
Cdd:PHA02875 114 KLDIMKLLIARGADPDIPNTD-KFSPL 139
PHA02876 PHA02876
ankyrin repeat protein; Provisional
 59-146 9.72e-03

ankyrin repeat protein; Provisional


Pssm-ID: 165207 [Multi-domain]  Cd Length: 682  Bit Score: 36.58  E-value: 9.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270288792  59 EGCTPL-MHAVSGRQVDTVKLLLKMGANINTQDAYGRTSLCLATYLG-WLEGCVSLLRNGAKHNIPDKNGRLPLHAATAE 136
Cdd:PHA02876 306 KGETPLyLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDrNKDIVITLLELGANVNARDYCDKTPIHYAAVR 385

                         90
                 ....*....|
gi 270288792 137 PDVRLLIVLL 146
Cdd:PHA02876 386 NNVVIINTLL 395
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH