NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|74139909|dbj|BAE31793|]
View 

unnamed protein product [Mus musculus]

Protein Classification

ATS1 family protein( domain architecture ID 11474102)

ATS1 family protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 32-389 1.70e-52

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


:

Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 179.02  E-value: 1.70e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909  32 TEPGLVLTLGQGDVGQLGLGESVlERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSemV 111
Cdd:COG5184  14 KSDGTVWCWGDNSYGQLGDGTTT-DRSTPVRVPGLSNVVAVAAGGDHTCALKADGTVWCWGNNSYGQLGDGTTTDRT--T 90

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 112 PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSfrDNNGVIGLLEPMKKSmVPVQVQLDA-PVVKVASGNDHLVMLTND 190
Cdd:COG5184  91 PVKVPGLTGVVAVAAGYYHSCALKSDGTVWCWGD--NSSGQLGDGTTTNRL-TPVQVDAGLsGVVAIAAGGYHTCALKSD 167

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 191 GDLYTLGCGEQGQLGRVpelfanrggrqGLGRLLVPRCVllksRGTRGrvrFQDAFCGAYFNFAISREGHVYGFGLSNYH 270
Cdd:COG5184 168 GTVWCWGANSYGQLGDG-----------TTTDRPTPVQV----GGLSG---VVAVAAGGDHSCALKSDGTVWCWGSNSSG 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 271 QLGTPGTGSCFIPQNLTSFKNstksWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGeGAEEKSIPTLISRLPVVSSV 350
Cdd:COG5184 230 QLGDGTTTDRATPVQVAGLTG----VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDG-TTTDRSTPVKVPGLSGVVAV 304

                       330       340       350
                ....*....|....*....|....*....|....*....
gi 74139909 351 ACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Cdd:COG5184 305 AAGSSHTCALLTDGTVWCWGDNAYGQLGDGTTTDRSTPV 343
 
Name Accession Description Interval E-value
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 32-389 1.70e-52

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 179.02  E-value: 1.70e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909  32 TEPGLVLTLGQGDVGQLGLGESVlERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSemV 111
Cdd:COG5184  14 KSDGTVWCWGDNSYGQLGDGTTT-DRSTPVRVPGLSNVVAVAAGGDHTCALKADGTVWCWGNNSYGQLGDGTTTDRT--T 90

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 112 PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSfrDNNGVIGLLEPMKKSmVPVQVQLDA-PVVKVASGNDHLVMLTND 190
Cdd:COG5184  91 PVKVPGLTGVVAVAAGYYHSCALKSDGTVWCWGD--NSSGQLGDGTTTNRL-TPVQVDAGLsGVVAIAAGGYHTCALKSD 167

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 191 GDLYTLGCGEQGQLGRVpelfanrggrqGLGRLLVPRCVllksRGTRGrvrFQDAFCGAYFNFAISREGHVYGFGLSNYH 270
Cdd:COG5184 168 GTVWCWGANSYGQLGDG-----------TTTDRPTPVQV----GGLSG---VVAVAAGGDHSCALKSDGTVWCWGSNSSG 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 271 QLGTPGTGSCFIPQNLTSFKNstksWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGeGAEEKSIPTLISRLPVVSSV 350
Cdd:COG5184 230 QLGDGTTTDRATPVQVAGLTG----VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDG-TTTDRSTPVKVPGLSGVVAV 304

                       330       340       350
                ....*....|....*....|....*....|....*....
gi 74139909 351 ACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Cdd:COG5184 305 AAGSSHTCALLTDGTVWCWGDNAYGQLGDGTTTDRSTPV 343
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
363-414 1.61e-11

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 59.07  E-value: 1.61e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 74139909   363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGkqLENRVVLTVSSGGQHTVLL 414
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEG--LSGNKVVQVACGGDHTVAL 50
 
Name Accession Description Interval E-value
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 32-389 1.70e-52

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 179.02  E-value: 1.70e-52
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909  32 TEPGLVLTLGQGDVGQLGLGESVlERKKPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSemV 111
Cdd:COG5184  14 KSDGTVWCWGDNSYGQLGDGTTT-DRSTPVRVPGLSNVVAVAAGGDHTCALKADGTVWCWGNNSYGQLGDGTTTDRT--T 90

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 112 PGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSfrDNNGVIGLLEPMKKSmVPVQVQLDA-PVVKVASGNDHLVMLTND 190
Cdd:COG5184  91 PVKVPGLTGVVAVAAGYYHSCALKSDGTVWCWGD--NSSGQLGDGTTTNRL-TPVQVDAGLsGVVAIAAGGYHTCALKSD 167

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 191 GDLYTLGCGEQGQLGRVpelfanrggrqGLGRLLVPRCVllksRGTRGrvrFQDAFCGAYFNFAISREGHVYGFGLSNYH 270
Cdd:COG5184 168 GTVWCWGANSYGQLGDG-----------TTTDRPTPVQV----GGLSG---VVAVAAGGDHSCALKSDGTVWCWGSNSSG 229

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 271 QLGTPGTGSCFIPQNLTSFKNstksWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGeGAEEKSIPTLISRLPVVSSV 350
Cdd:COG5184 230 QLGDGTTTDRATPVQVAGLTG----VVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDG-TTTDRSTPVKVPGLSGVVAV 304

                       330       340       350
                ....*....|....*....|....*....|....*....
gi 74139909 351 ACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Cdd:COG5184 305 AAGSSHTCALLTDGTVWCWGDNAYGQLGDGTTTDRSTPV 343
ATS1 COG5184
Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, ...
 70-417 4.91e-51

Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 444065 [Multi-domain]  Cd Length: 343  Bit Score: 175.17  E-value: 4.91e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909  70 VQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSemVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGSfrDN 149
Cdd:COG5184   1 TQVAAGGSHSCALKSDGTVWCWGDNSYGQLGDGTTTDRS--TPVRVPGLSNVVAVAAGGDHTCALKADGTVWCWGN--NS 76

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 150 NGVIGLLEPmKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRvpelfANRGGRqglgrlLVPRCV 229
Cdd:COG5184  77 YGQLGDGTT-TDRTTPVKVPGLTGVVAVAAGYYHSCALKSDGTVWCWGDNSSGQLGD-----GTTTNR------LTPVQV 144

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 230 LLksrgtrGRVRFQDAFCGAYFNFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNstksWVGFSGGQHHTVCM 309
Cdd:COG5184 145 DA------GLSGVVAIAAGGYHTCALKSDGTVWCWGANSYGQLGDGTTTDRPTPVQVGGLSG----VVAVAAGGDHSCAL 214

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74139909 310 DSEGKAYSLGRAEYGRLGLGeGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Cdd:COG5184 215 KSDGTVWCWGSNSSGQLGDG-TTTDRATPVQVAGLTGVVAIAAGGSHTCALKSDGTVWCWGDNSYGQLGDGTTTDRSTPV 293

                       330       340
                ....*....|....*....|....*...
gi 74139909 390 EMTGkqLENrvVLTVSSGGQHTVLLVKD 417
Cdd:COG5184 294 KVPG--LSG--VVAVAAGSSHTCALLTD 317
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
363-414 1.61e-11

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 59.07  E-value: 1.61e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 74139909   363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGkqLENRVVLTVSSGGQHTVLL 414
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEG--LSGNKVVQVACGGDHTVAL 50
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
85-134 1.43e-10

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 56.37  E-value: 1.43e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 74139909    85 SGQVYSFGCNDEGALGRDTSVegSEMVPGKVEL--QEKVVQVSAGDSHTAAL 134
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTE--NVLVPQKVEGlsGNKVVQVACGGDHTVAL 50
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
258-309 1.42e-08

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 50.59  E-value: 1.42e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 74139909   258 EGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNstKSWVGFSGGQHHTVCM 309
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTTENVLVPQKVEGLSG--NKVVQVACGGDHTVAL 50
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
35-82 9.16e-07

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 45.59  E-value: 9.16e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 74139909    35 GLVLTLGQGDVGQLGLGeSVLERKKPALVPLLQD--VVQAEAGGMHTVCL 82
Cdd:pfam00415   2 GRVYTWGRNDYGQLGLG-TTENVLVPQKVEGLSGnkVVQVACGGDHTVAL 50
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
121-145 1.21e-06

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 44.72  E-value: 1.21e-06
                          10        20
                  ....*....|....*....|....*
gi 74139909   121 VVQVSAGDSHTAALTEDGRVFLWGS 145
Cdd:pfam13540   1 VVSVAAGDNHTLALTSDGRVYCWGD 25
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
312-355 9.72e-05

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 39.81  E-value: 9.72e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 74139909   312 EGKAYSLGRAEYGRLGLGEGaEEKSIPTLISRLPV--VSSVACGAS 355
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTT-ENVLVPQKVEGLSGnkVVQVACGGD 45
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
190-255 1.27e-04

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 39.42  E-value: 1.27e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74139909   190 DGDLYTLGCGEQGQLGRVPElfANRggrqglgrlLVPRCVllksrGTRGRVRFQDAFCGAYFNFAI 255
Cdd:pfam00415   1 DGRVYTWGRNDYGQLGLGTT--ENV---------LVPQKV-----EGLSGNKVVQVACGGDHTVAL 50
RCC1 pfam00415
Regulator of chromosome condensation (RCC1) repeat;
137-187 1.48e-04

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 395335 [Multi-domain]  Cd Length: 50  Bit Score: 39.04  E-value: 1.48e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 74139909   137 DGRVFLWGsfRDNNGVIGlLEPMKKSMVPVQVQL--DAPVVKVASGNDHLVML 187
Cdd:pfam00415   1 DGRVYTWG--RNDYGQLG-LGTTENVLVPQKVEGlsGNKVVQVACGGDHTVAL 50
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
69-97 1.01e-03

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 36.25  E-value: 1.01e-03
                          10        20
                  ....*....|....*....|....*....
gi 74139909    69 VVQAEAGGMHTVCLSQSGQVYSFGCNDEG 97
Cdd:pfam13540   1 VVSVAAGDNHTLALTSDGRVYCWGDNSYG 29
RCC1_2 pfam13540
Regulator of chromosome condensation (RCC1) repeat;
347-376 1.56e-03

Regulator of chromosome condensation (RCC1) repeat;


Pssm-ID: 463914 [Multi-domain]  Cd Length: 30  Bit Score: 35.86  E-value: 1.56e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 74139909   347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQ 376
Cdd:pfam13540   1 VVSVAAGDNHTLALTSDGRVYCWGDNSYGQ 30
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH