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Conserved domains on  [gi|133777692|gb|AAI15632|]
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Mnat1 protein, partial [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
cdk7 super family cl31015
CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions ...
 1-229 1.09e-135

CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


The actual alignment was detected with superfamily member TIGR00570:

Pssm-ID: 129661 [Multi-domain]  Cd Length: 309  Bit Score: 386.47  E-value: 1.09e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692    1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLK 80
Cdd:TIGR00570   1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGSCPECDTPLRKNNFRVQLFEDPTVEKEVDIRKRVLK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   81 IYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQEHEQ 160
Cdd:TIGR00570  81 IYNKREEDFPSLREYNDYLEEVEDIVYNLTNNIDLENTKKKIETYQKENKDVIQKNKEKSTREQEELEEALEFEKEEEEQ 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133777692  161 RRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPRSMKPVTFSTGIKM 229
Cdd:TIGR00570 161 RRLLLQKEEEEQQMNKRKNKQALLDELETSTLPAAELIAQHKKNSVKLEMQVEKPKPEKPNTFSTGIKM 229
 
Name Accession Description Interval E-value
cdk7 TIGR00570
CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions ...
 1-229 1.09e-135

CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 129661 [Multi-domain]  Cd Length: 309  Bit Score: 386.47  E-value: 1.09e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692    1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLK 80
Cdd:TIGR00570   1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGSCPECDTPLRKNNFRVQLFEDPTVEKEVDIRKRVLK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   81 IYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQEHEQ 160
Cdd:TIGR00570  81 IYNKREEDFPSLREYNDYLEEVEDIVYNLTNNIDLENTKKKIETYQKENKDVIQKNKEKSTREQEELEEALEFEKEEEEQ 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133777692  161 RRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPRSMKPVTFSTGIKM 229
Cdd:TIGR00570 161 RRLLLQKEEEEQQMNKRKNKQALLDELETSTLPAAELIAQHKKNSVKLEMQVEKPKPEKPNTFSTGIKM 229
MAT1 pfam06391
CDK-activating kinase assembly factor MAT1; MAT1 is an assembly/targeting factor for ...
 53-235 4.16e-82

CDK-activating kinase assembly factor MAT1; MAT1 is an assembly/targeting factor for cyclin-dependent kinase-activating kinase (CAK), which interacts with the transcription factor TFIIH. The domain found to the N-terminal side of this domain is a C3HC4 RING finger.


Pssm-ID: 461894 [Multi-domain]  Cd Length: 202  Bit Score: 246.38  E-value: 4.16e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   53 LRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDV 132
Cdd:pfam06391   1 LRKNKFRVQIFEDPGVEKEVDIRKRVLKIFNKTEEDFPSLREYNDYLEEVEDIVFNLTNGIDVEETEKKIEQYEKENKDL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692  133 IQKNKLKLTREQEELEEALEVERQEHEQRRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEM-- 210
Cdd:pfam06391  81 ILKNKMKLSQEEEELEELLELEKREKEERRKEEKQEEEEEKEKKEKAKQELIDELMTSNKDAEEIIAQHKKTAKKRKSer 160

                         170       180       190
                  ....*....|....*....|....*....|
gi 133777692  211 -----QLEKPRSMKPVTFSTGIKMVFKPRP 235
Cdd:pfam06391 161 rrkleELNRVLEQKPTQFSTGIKFGQLPVP 190
TFB3 COG5220
Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision ...
 1-190 7.95e-46

Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair];


Pssm-ID: 227545 [Multi-domain]  Cd Length: 314  Bit Score: 157.10  E-value: 7.95e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   1 MDDQGCPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGAGNCP--ECGTPLRKSNFRVQLFEDPTVDKEVEIRKK 77
Cdd:COG5220    8 MEDRRCPVCKSDRYLNPDIKILINpECYHRMCESCVDRIFSRGPAQCPykGCGKILRKIKFIKQTFEDITVEKEVDVRKR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692  78 VLKIYNKREEDF-PSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQ 156
Cdd:COG5220   88 LLRAFNKEEEEFgGDLAKYNDYLEEVEELVFELLELIDVSLTEEKVKKYEEMNQDSILNNLERPTPEVMPGKQKNVLQKR 167

                        170       180       190
                 ....*....|....*....|....*....|....
gi 133777692 157 EHEQRRLFIQKEEELQQALKRKNKQAFLDELESS 190
Cdd:COG5220  168 MKLKKRQLERQIEEEERMNKEWTKKEIGNRLGTA 201
RING-HC_MAT1 cd16517
RING finger, HC subclass, found in RING finger protein MAT1; MAT1, also known as ...
 4-58 5.44e-36

RING finger, HC subclass, found in RING finger protein MAT1; MAT1, also known as CDK-activating kinase assembly factor MAT1, CDK7/cyclin-H assembly factor, cyclin-G1-interacting protein, menage a trois, RING finger protein 66 (RNF66), p35, or p36, is involved in cell cycle control and in RNA transcription by RNA polymerase II. It associates primarily with the catalytic subunit cyclin-dependent kinase 7 (CDK7) and the regulatory subunit cyclin H to form the CDK-activating kinase (CAK) complex that can further associate with the core-TFIIH to form the transcription factor IIH (TFIIH) basal transcription/DNA repair factor, which activates RNA polymerase II by serine phosphorylation of the repetitive C-terminal domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter, and elongation of the transcripts. MAT1 contains an N-terminal C3HC4-type RING-HC finger, a central coiled coil domain, and a C-terminal domain rich in hydrophobic residues.


Pssm-ID: 438180 [Multi-domain]  Cd Length: 55  Bit Score: 123.33  E-value: 5.44e-36
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 133777692   4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58
Cdd:cd16517    1 QYCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGPCPECGTPLRRSNF 55
RING smart00184
Ring finger; E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and ...
 6-49 2.17e-04

Ring finger; E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)


Pssm-ID: 214546 [Multi-domain]  Cd Length: 40  Bit Score: 38.26  E-value: 2.17e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 133777692     6 CPRCKTTKYRNPslklMVNVCGHTLCESCVDLLFVRGAGNCPEC 49
Cdd:smart00184   1 CPICLEEYLKDP----VILPCGHTFCRSCIRKWLESGNNTCPIC 40
 
Name Accession Description Interval E-value
cdk7 TIGR00570
CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions ...
 1-229 1.09e-135

CDK-activating kinase assembly factor MAT1; All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]


Pssm-ID: 129661 [Multi-domain]  Cd Length: 309  Bit Score: 386.47  E-value: 1.09e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692    1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRVQLFEDPTVDKEVEIRKKVLK 80
Cdd:TIGR00570   1 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGSCPECDTPLRKNNFRVQLFEDPTVEKEVDIRKRVLK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   81 IYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQEHEQ 160
Cdd:TIGR00570  81 IYNKREEDFPSLREYNDYLEEVEDIVYNLTNNIDLENTKKKIETYQKENKDVIQKNKEKSTREQEELEEALEFEKEEEEQ 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 133777692  161 RRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPRSMKPVTFSTGIKM 229
Cdd:TIGR00570 161 RRLLLQKEEEEQQMNKRKNKQALLDELETSTLPAAELIAQHKKNSVKLEMQVEKPKPEKPNTFSTGIKM 229
MAT1 pfam06391
CDK-activating kinase assembly factor MAT1; MAT1 is an assembly/targeting factor for ...
 53-235 4.16e-82

CDK-activating kinase assembly factor MAT1; MAT1 is an assembly/targeting factor for cyclin-dependent kinase-activating kinase (CAK), which interacts with the transcription factor TFIIH. The domain found to the N-terminal side of this domain is a C3HC4 RING finger.


Pssm-ID: 461894 [Multi-domain]  Cd Length: 202  Bit Score: 246.38  E-value: 4.16e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   53 LRKSNFRVQLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDV 132
Cdd:pfam06391   1 LRKNKFRVQIFEDPGVEKEVDIRKRVLKIFNKTEEDFPSLREYNDYLEEVEDIVFNLTNGIDVEETEKKIEQYEKENKDL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692  133 IQKNKLKLTREQEELEEALEVERQEHEQRRLFIQKEEELQQALKRKNKQAFLDELESSDLPVALLLAQHKDRSTQLEM-- 210
Cdd:pfam06391  81 ILKNKMKLSQEEEELEELLELEKREKEERRKEEKQEEEEEKEKKEKAKQELIDELMTSNKDAEEIIAQHKKTAKKRKSer 160

                         170       180       190
                  ....*....|....*....|....*....|
gi 133777692  211 -----QLEKPRSMKPVTFSTGIKMVFKPRP 235
Cdd:pfam06391 161 rrkleELNRVLEQKPTQFSTGIKFGQLPVP 190
TFB3 COG5220
Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision ...
 1-190 7.95e-46

Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair];


Pssm-ID: 227545 [Multi-domain]  Cd Length: 314  Bit Score: 157.10  E-value: 7.95e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692   1 MDDQGCPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGAGNCP--ECGTPLRKSNFRVQLFEDPTVDKEVEIRKK 77
Cdd:COG5220    8 MEDRRCPVCKSDRYLNPDIKILINpECYHRMCESCVDRIFSRGPAQCPykGCGKILRKIKFIKQTFEDITVEKEVDVRKR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 133777692  78 VLKIYNKREEDF-PSLREYNDFLEEVEEIVFNLTNNVDLENTKKKMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQ 156
Cdd:COG5220   88 LLRAFNKEEEEFgGDLAKYNDYLEEVEELVFELLELIDVSLTEEKVKKYEEMNQDSILNNLERPTPEVMPGKQKNVLQKR 167

                        170       180       190
                 ....*....|....*....|....*....|....
gi 133777692 157 EHEQRRLFIQKEEELQQALKRKNKQAFLDELESS 190
Cdd:COG5220  168 MKLKKRQLERQIEEEERMNKEWTKKEIGNRLGTA 201
RING-HC_MAT1 cd16517
RING finger, HC subclass, found in RING finger protein MAT1; MAT1, also known as ...
 4-58 5.44e-36

RING finger, HC subclass, found in RING finger protein MAT1; MAT1, also known as CDK-activating kinase assembly factor MAT1, CDK7/cyclin-H assembly factor, cyclin-G1-interacting protein, menage a trois, RING finger protein 66 (RNF66), p35, or p36, is involved in cell cycle control and in RNA transcription by RNA polymerase II. It associates primarily with the catalytic subunit cyclin-dependent kinase 7 (CDK7) and the regulatory subunit cyclin H to form the CDK-activating kinase (CAK) complex that can further associate with the core-TFIIH to form the transcription factor IIH (TFIIH) basal transcription/DNA repair factor, which activates RNA polymerase II by serine phosphorylation of the repetitive C-terminal domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter, and elongation of the transcripts. MAT1 contains an N-terminal C3HC4-type RING-HC finger, a central coiled coil domain, and a C-terminal domain rich in hydrophobic residues.


Pssm-ID: 438180 [Multi-domain]  Cd Length: 55  Bit Score: 123.33  E-value: 5.44e-36
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 133777692   4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58
Cdd:cd16517    1 QYCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGSGPCPECGTPLRRSNF 55
RING-HC_TFB3-like cd16573
RING finger, HC subclass, found in RNA polymerase II transcription factor B subunit 3 (TFB3) ...
 3-55 3.81e-11

RING finger, HC subclass, found in RNA polymerase II transcription factor B subunit 3 (TFB3) from fungi; TFB3, also known as RNA polymerase II transcription factor B 38 kDa subunit, RNA polymerase II transcription factor B p38 subunit, or Rig2, is a component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription and is involved in nucleotide excision repair (NER) of damaged DNA. TFIIH has CTD kinase and DNA-dependent ATPase activities, and is essential for polymerase II transcription in vitro. TFB3 is a homolog of MAT1 of higher eukaryotes which forms a ternary complex with MO15 (cdk7) and cyclin H. It physically interacts with Ubc4 and the Nedd8-conjugating enzyme Ubc12 as well as the Hrt1/Rtt101 complex. It targets the yeast Cul4-type cullin Rtt101 for its neddylation and ubiquitylation, and regulates neddylation and activity of cullin-3, but not Cdc53. TFB3 contains an N-terminal C3HC4-type RING-HC finger and a C-terminal MAT1 domain responsible for the interaction with the transcription factor TFIIH.


Pssm-ID: 438235 [Multi-domain]  Cd Length: 56  Bit Score: 57.47  E-value: 3.81e-11
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 133777692   3 DQGCPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPE--CGTPLRK 55
Cdd:cd16573    1 DEKCPVCKSDRYLNPDMKFLINPeCYHKMCESCVDRIFTLGPAQCPYkgCGKILRK 56
zf-C3HC4_5 pfam17121
Zinc finger, C3HC4 type (RING finger);
3-50 1.10e-10

Zinc finger, C3HC4 type (RING finger);


Pssm-ID: 435732 [Multi-domain]  Cd Length: 51  Bit Score: 55.95  E-value: 1.10e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 133777692    3 DQGCPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGAGNCPECG 50
Cdd:pfam17121   1 DEMCPVCKSSRYLNPDMRFLINpECYHKMCESCVDRLFNDGPNQCPVAG 49
RING smart00184
Ring finger; E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and ...
 6-49 2.17e-04

Ring finger; E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)


Pssm-ID: 214546 [Multi-domain]  Cd Length: 40  Bit Score: 38.26  E-value: 2.17e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 133777692     6 CPRCKTTKYRNPslklMVNVCGHTLCESCVDLLFVRGAGNCPEC 49
Cdd:smart00184   1 CPICLEEYLKDP----VILPCGHTFCRSCIRKWLESGNNTCPIC 40
RING-HC cd16449
HC subclass of RING (RING-HC) finger and its variants; The RING finger is a specialized type ...
 6-49 8.28e-03

HC subclass of RING (RING-HC) finger and its variants; The RING finger is a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc. It is defined by the "cross-brace" motif that chelates zinc atoms by eight amino acid residues, typically Cys or His, arranged in a characteristic spacing. Canonical RING motifs have been categorized into two major subclasses, RING-HC (C3HC4-type) and RING-H2 (C3H2C3-type), according to their Cys/His content. There are also many variants of RING fingers. Some have a different Cys/His pattern. Some lack a single Cys or His residue at typical Zn ligand positions, especially, the fourth or eighth zinc ligand is prevalently exchanged for an Asp, which can chelate Zn in a RING finger as well. This family corresponds to the HC subclass of RING (RING-HC) fingers that are characterized by containing C3HC4-type canonical RING-HC fingers or noncanonical RING-HC finger variants, including C4C4-, C3HC3D-, C2H2C4-, and C3HC5-type modified RING-HC fingers. The canonical RING-HC finger has been defined as C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C. It binds two Zn ions in a unique "cross-brace" arrangement, which distinguishes it from tandem zinc fingers and other similar motifs. RING-HC fingers can be found in a group of diverse proteins with a variety of cellular functions, including oncogenesis, development, viral replication, signal transduction, the cell cycle, and apoptosis. Many of them are ubiquitin-protein ligases (E3s) that serve as scaffolds for binding to ubiquitin-conjugating enzymes (E2s, also referred to as ubiquitin carrier proteins or UBCs) in close proximity to substrate proteins, which enables efficient transfer of ubiquitin from E2 to the substrates.


Pssm-ID: 438113 [Multi-domain]  Cd Length: 41  Bit Score: 33.61  E-value: 8.28e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 133777692   6 CPRCKTTkYRNPslklMVNVCGHTLCESCVDLLFVRGAGNCPEC 49
Cdd:cd16449    3 CPICLER-LKDP----VLLPCGHVFCRECIRRLLESGSIKCPIC 41
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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