|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
45-661 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1153.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 45 SDGVSNQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTV 124
Cdd:PTZ00139 16 SGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 125 KGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGR 204
Cdd:PTZ00139 96 KGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQ 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 205 SLRYDTSYFVEYFALDLLM-EDGECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLP 283
Cdd:PTZ00139 176 SLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLP 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 284 CQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKDHVHL 363
Cdd:PTZ00139 256 LQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCGPNKDHIYL 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 364 QLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITYKDG-QDHVVPGLYACGEAGCAS 442
Cdd:PTZ00139 336 DLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGdDDKIVPGLLAAGEAACAS 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 443 VHGANRLGANSLLDLVVFGRACALTIAEIDTPGEKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAV 522
Cdd:PTZ00139 416 VHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAV 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 523 FRTGDVLKEGCVKMESVYKSMDNIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEyd 602
Cdd:PTZ00139 496 FRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDK-- 573
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 603 yskplqgqvkkpfeqHWRKHTLSYV-DPETGKVTLEYRPVIDSSLDAEdCAAIPPAIRSY 661
Cdd:PTZ00139 574 ---------------NWMKHTLSYIrDVKKGKVRLTYRPVITTPLDNE-METVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
1-661 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1067.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 1 MAAVCAASRVlgTKILSSKSLPAVCQANRQLHFSIYGKRGDAKISdgvsnqYPVVDHEFDAVVVGAGGAGLRAAFGLSEA 80
Cdd:PLN00128 1 MWRRCVARGL--RLLASSSASSSLASASLRTALSRFFSTGGGRSS------YTIVDHTYDAVVVGAGGAGLRAAIGLSEH 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 81 GFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRT 160
Cdd:PLN00128 73 GFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRT 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 161 DDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-EDGECKGVIALCMEDG 239
Cdd:PLN00128 153 EDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMdSDGACQGVIALNMEDG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 240 SIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSE 319
Cdd:PLN00128 233 TLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 320 GERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIPV 399
Cdd:PLN00128 313 GERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 400 LPTVHYNMGGIPTNYKGQVITYK-DGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIDTPGEKL 478
Cdd:PLN00128 393 LPTVHYNMGGIPTNYHGEVVTIKgDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQ 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 479 SPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRGIVWNTD 558
Cdd:PLN00128 473 KPLPKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSD 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 559 LVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEydyskplqgqvkkpfeqHWRKHTLSYVdpETGKVTLEY 638
Cdd:PLN00128 553 LIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDE-----------------NWMKHTLGYW--EEGKVRLDY 613
|
650 660
....*....|....*....|...
gi 28374211 639 RPVIDSSLDAEdCAAIPPAIRSY 661
Cdd:PLN00128 614 RPVHMNTLDDE-VETFPPKARVY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
77-661 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 1011.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMP 156
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 157 FSRTDDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCM 236
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 237 EDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 316
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 317 NSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEP 396
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 397 IPVLPTVHYNMGGIPTNYKGQVITYKDGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIDTPGE 476
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLRDGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 477 KLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRGIVWN 556
Cdd:TIGR01816 401 DVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 557 TDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEydyskplqgqvkkpfeqHWRKHTLSYVDPETGKVTL 636
Cdd:TIGR01816 481 TDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDE-----------------NWLKHTLSYVDINTGKVLL 543
|
570 580
....*....|....*....|....*
gi 28374211 637 EYRPVIDSSLDAEDCAaipPAIRSY 661
Cdd:TIGR01816 544 SYKPVIFKPLTVADFE---PKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
79-661 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 787.29 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 79 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDD-WRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPF 157
Cdd:TIGR01812 20 KAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPDDsWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 158 SRTDDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCME 237
Cdd:TIGR01812 100 SRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 238 DGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILIN 317
Cdd:TIGR01812 172 TGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 318 SEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVG-PDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEP 396
Cdd:TIGR01812 252 KNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 397 IPVLPTVHYNMGGIPTNYKGQVITykdgqDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAE-IDTPG 475
Cdd:TIGR01812 332 IPVRPTAHYSMGGIPTDYTGRVIC-----ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEyAAKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 476 EKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRGIVW 555
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 556 NTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEydyskplqgqvkkpfeqHWRKHTLSYVDPEtGKVT 635
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDE-----------------NWLKHTLAYYDNP-GTPR 548
|
570 580
....*....|....*....|....*.
gi 28374211 636 LEYRPVidssldaeDCAAIPPAIRSY 661
Cdd:TIGR01812 549 LEYKPV--------TITKYEPAERKY 566
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
82-642 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 555.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 82 FNTACVTKLFPTRSHTVAAQGGINAALGNME-QDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRT 160
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 161 DDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCMEDGS 240
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 241 IHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEG 320
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 321 ERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPD----KDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEP 396
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 397 IPVLPTVHYNMGGIPTNYKGQVITYKDGqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEiDTPGE 476
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVRRSADG---LVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAE-YVQGR 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 477 KLSPLKP----NAGEASVANL-DKmryaNGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDR 551
Cdd:PRK05945 417 KLPEVDEqrylKEAKQRIQALlDQ----SGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDK 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 552 GIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDeydyskplqgqvkkpfeQHWRKHTLSYVDPet 631
Cdd:PRK05945 493 GKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDD-----------------QNFLKHTLAYYSP-- 553
|
570
....*....|.
gi 28374211 632 GKVTLEYRPVI 642
Cdd:PRK05945 554 AGIDIQYMPVV 564
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
78-641 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 542.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 78 SEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPF 157
Cdd:PRK06069 28 SGGKLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 158 SRTDDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV-EYFALDLLMEDGECKGVIALCM 236
Cdd:PRK06069 108 SRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDNIHFYdEHFVTSLIVENGVFKGVTAIDL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 237 EDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 316
Cdd:PRK06069 180 KRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 317 NSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKD--HVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTK 394
Cdd:PRK06069 260 NKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 395 EPIPVLPTVHYNMGGIPTNYKGQVITyKDGQdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGR-------ACALT 467
Cdd:PRK06069 340 EPIPVRPAAHYTMGGIHTDVYGRVLT-ADGE--WVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRiageqaaEYALK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 468 IAEIDTPGEKLSPLKpnagEASVanLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIK 547
Cdd:PRK06069 417 RPAPSSPVEKLAEKE----EKRI--FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVR 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 548 TFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEydyskplqgqvkkpfeqHWRKHTLSYV 627
Cdd:PRK06069 491 IEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDE-----------------NWLKHTLAYY 553
|
570
....*....|....
gi 28374211 628 DPETGKVTleYRPV 641
Cdd:PRK06069 554 TGGGPKVT--YTPV 565
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
85-661 |
3.94e-164 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 482.98 E-value: 3.94e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 85 ACVTKLFPTRSHTVAAQGGinAALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGK 164
Cdd:PRK09231 33 ALISKVYPMRSHTVAAEGG--SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 165 IYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSY-FVEYFALDLLMEDGECKGVIALCMEDGSIHR 243
Cdd:PRK09231 111 VNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQ 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 244 FRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEGERF 323
Cdd:PRK09231 183 IRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRY 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 324 MERYA---------PNAK--DLASRDVVSRSMTIEIREGRGV-GPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVD 391
Cdd:PRK09231 263 LQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVD 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 392 VTKEPIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEagCASV--HGANRLGANSLLDLVVFGRACALTIA 469
Cdd:PRK09231 343 PVKEPIPVRPTAHYTMGGIETDQNCET---------RIKGLFAVGE--CSSVglHGANRLGSNSLAELVVFGRVAGEQAA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 470 E--IDTPGEKLSPLKPNAgEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIK 547
Cdd:PRK09231 412 EraATAGPGNEAALDAQA-ADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVR 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 548 TFDRGIVWNTDLVETLELqNLMLNAVQTIV-SAEARKESRGAHARED--FKDRVDEydyskplqgqvkkpfeqHWRKHTL 624
Cdd:PRK09231 491 ITDTSSVFNTDLLYTIEL-GYGLDVAECMAhSALARKESRGAHQRLDegCTERDDV-----------------NFLKHTL 552
|
570 580 590
....*....|....*....|....*....|....*...
gi 28374211 625 SYVDPEtGKVTLEYRPV-IDSSldaedcaaiPPAIRSY 661
Cdd:PRK09231 553 AFYNAD-GTPRIEYSDVkITKS---------PPAKRVY 580
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
77-641 |
2.88e-147 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 439.32 E-value: 2.88e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTKLFPTRSHTVAAQGGINAAL-GNME-QDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFG 154
Cdd:PRK06452 24 IASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 155 MPFSRTDDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIAL 234
Cdd:PRK06452 104 ALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 235 CMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 314
Cdd:PRK06452 176 QMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 315 LINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGVgpDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTK 394
Cdd:PRK06452 256 LKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFT 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 395 EPIPVLPTVHYNMGGIPTNykgqvITykdGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIdTP 474
Cdd:PRK06452 334 EPIPVRPAQHYYMGGIDVD-----ID---GRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQF-LK 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 475 GEKLSPLKPNAGEASVANLDKMRYANGST--RTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRG 552
Cdd:PRK06452 405 SNPGNPTSNYEKEAEKVVDDAYKFVKSESgvHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKS 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 553 IVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDeydyskplqgqvkkpfeQHWRKHTLSYVDPETG 632
Cdd:PRK06452 485 KVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDD-----------------NNWLKHTIAYLRGNTV 547
|
....*....
gi 28374211 633 KVTleYRPV 641
Cdd:PRK06452 548 EVT--FKPV 554
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
77-601 |
1.11e-146 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 436.08 E-value: 1.11e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGfNTACVTKLFPTRSHTVAAQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMP 156
Cdd:COG0029 23 LAERG-RVTLLTKGELGESNTRWAQGGIAAVLD--PGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVP 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 157 FSRTDDGKIYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDT-SYFVEYFALDLLME-DGECKGVIAL 234
Cdd:COG0029 100 FDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNiTVLENHFAVDLITDaDGRCVGAYVL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 235 CMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGE 311
Cdd:COG0029 172 DEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 312 GGILINSEGERFMERYAPNAkDLASRDVVSRSMTIEIREGRGvgpdkDHVHLQLHHLPPQQLAARLPGISETAMIFaGVD 391
Cdd:COG0029 252 GAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GID 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 392 VTKEPIPVLPTVHYNMGGIPTNykgqvityKDGQDHvVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEi 471
Cdd:COG0029 325 ITKEPIPVAPAAHYTMGGVATD--------LDGRTS-IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAA- 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 472 DTPGEKLSPLKPnAGEASVANLDkmryanGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFdr 551
Cdd:COG0029 395 RLAESPLPPEIP-EWDESVTDPD------EEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYANF-- 465
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 28374211 552 givwnTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEY 601
Cdd:COG0029 466 -----RVSRDLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPAW 510
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
70-470 |
2.17e-138 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 411.92 E-value: 2.17e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 70 GLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQ----DDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPA 145
Cdd:COG1053 15 GLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQKaageDSPEEHFYDTVKGGDGLADQDLVEALAEEAPE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 146 AVVELENFGMPFSRTDDGKIYQraFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMED 225
Cdd:COG1053 95 AIDWLEAQGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 226 GECKGVIALCmEDGSIHRFRAKNTVIATGGYGRTF------------FSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFH 293
Cdd:COG1053 165 GRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFH 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 294 PTGIYGAGCLITEGCRG-EGGILINSEGERFMERYAPnakdlasRDVVSRSMTIEIREGRGVGPDKDHVHLQLHHLPP-- 370
Cdd:COG1053 244 PTGLPGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPAYLVLDLRHRRRLEEYLEAgy 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 371 -------QQLAARLpGISETAMIF----------AGVDVTKE-----------PIPVLPTVHYNMGGIPTNYKGQVItyk 422
Cdd:COG1053 317 lvkadtiEELAAKL-GIDAAELAAtvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVL--- 392
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 28374211 423 DGQDHVVPGLYACGEAgCASVHGANRLGANSLLDLVVFGRACALTIAE 470
Cdd:COG1053 393 DADGTPIPGLYAAGEA-AGSVHGANRLGGNSLGDALVFGRIAGRHAAE 439
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
79-661 |
1.70e-135 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 412.06 E-value: 1.70e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 79 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNM---EQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGM 155
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAvkgEGDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 156 PFSRTDDGK---------------------IYQRAFGGQSlKFgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV 214
Cdd:PRK08626 106 PWTRVTAGPrtvvingekvtitekeeahglINARDFGGTK-KW-------RTCYTADGTGHTMLYAVDNEAIKLGVPVHD 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 215 EYFALDLLMEDGECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGL-PCQDLEFVQFH 293
Cdd:PRK08626 178 RKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFH 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 294 PTGIYGAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGV-GPDKDHVHLQLHHLPPQQ 372
Cdd:PRK08626 258 PTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKH 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 373 LAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITYKdgqdhvvpGLYACGEAGCASVHGANRLGAN 452
Cdd:PRK08626 338 IETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYGLK--------GLFSAGEAACWDMHGFNRLGGN 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 453 SLLDLVVFGRACALTIAE--------IDTpgeklsPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFR 524
Cdd:PRK08626 410 SLAETVVAGMIVGKYVADfclgneleIDT------ALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFR 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 525 TGDVLKEGCVKMESVYKSMDNIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDeydys 604
Cdd:PRK08626 484 NGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRND----- 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 28374211 605 kplqgqvkkpfeQHWRKHTLSY-VDPETGKVTLEYRPVidSSLDAEdcaaIPPAIRSY 661
Cdd:PRK08626 559 ------------RDWLNRTLASwPEGEALEPTLEYEPL--DVMKME----LPPGFRGY 598
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
97-601 |
3.70e-131 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 397.04 E-value: 3.70e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 97 TVAAQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQSLK 176
Cdd:PRK06263 46 TVMAEGGYNAVLN--PEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 177 fgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDG-ECKGVIALCMEDGSIHRFRAKNTVIATGG 255
Cdd:PRK06263 124 --------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENrEVIGAIFLDLRNGEIFPIYAKATILATGG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 256 YGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGI----YGAGCLITEGCRGEGGILINSEGERFMERYAPNA 331
Cdd:PRK06263 196 AGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPER 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 332 KDLASRDVVSRSMTIEIREGRGVgpDKDHVHLQLHHLPPQQLAARLPGISETAMIFaGVDVTKEPIPVLPTVHYNMGGIP 411
Cdd:PRK06263 276 MELSTRDVVARAIYTEIQEGRGT--NHGGVYLDVTHLPDEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGIR 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 412 TNYKGQVitykdgqdhVVPGLYACGEAgCASVHGANRLGANSLLDLVVFGRACALTIAEIdtpGEKLSPLKPN-AGEASV 490
Cdd:PRK06263 353 INEDCET---------NIPGLFACGEV-AGGVHGANRLGGNALADTQVFGAIAGKSAAKN---AENNEFKKVNrSVEEDI 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 491 ANLDKM-RYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRgivwnTDLVETLELQNLM 569
Cdd:PRK06263 420 ARIKSEiKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGI-----VDFNKALELENMI 494
|
490 500 510
....*....|....*....|....*....|..
gi 28374211 570 LNAVQTIVSAEARKESRGAHAREDFKDRVDEY 601
Cdd:PRK06263 495 LVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
77-454 |
2.88e-130 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 389.34 E-value: 2.88e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTKLFPTRSHTVAAQGGINAaLGNMEQ---DDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENF 153
Cdd:pfam00890 18 AAEAGLKVAVVEKGQPFGGATAWSSGGIDA-LGNPPQggiDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEAL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 154 GMPFSRTDDGKIYQRAFGGQSLKfgkggqAHRCCCVADR-----TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGEC 228
Cdd:pfam00890 97 GVPFSRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 229 KGVIALCMEDGSIHRFRAK-NTVIATGGYGR---------TFFSCTSAHTSTGDGNAMVTRAGLPCQD--LEFVQFHPTG 296
Cdd:pfam00890 171 TGAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 297 IYG----AGCLItEGCRGEGGILINSEGERFMeryapnaKDLASRDVVSRSMT-IEIREGRGvgpdkDHVHLQLHH-LPP 370
Cdd:pfam00890 251 LVGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-----ANVYLDASGsLDA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 371 QQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVItykDGQDHVVPGLYACGEAGCASVHGANRLG 450
Cdd:pfam00890 318 EGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL---DADGQPIPGLYAAGEVACGGVHGANRLG 394
|
....
gi 28374211 451 ANSL 454
Cdd:pfam00890 395 GNSL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
57-640 |
5.15e-108 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 339.70 E-value: 5.15e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 57 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNM-EQDDWRWHFYDTVKGSDWLGDQDA 135
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 136 IHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGR--SLRYDTSY- 212
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYP--------RLAHVGDRTGLELIRTLQQKivSLQQEDHAe 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 213 ----------FVEYFALDLLMEDGECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGL 282
Cdd:PRK07803 159 lgdyearikvFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 283 PCQDLEFVQFHPTGIYGA----GCLITEGCRGEGGILINSEGERFMERYAP----------------------NAK---D 333
Cdd:PRK07803 239 TLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwykdndNNRrppE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 334 LASRDVVSRSMTIEIREGRGvgpdKDH--VHLQL-HHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGI 410
Cdd:PRK07803 319 LLPRDEVARAINSEVKAGRG----SPHggVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGV 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 411 PTNykgqvityKDGQDHVVPGLYACGEagCAS-VHGANRLGANSLLDLVVFGRACALTIAE-IDTPGEKLSPLKPNAGEA 488
Cdd:PRK07803 395 EVD--------PDTGAATVPGLFAAGE--CAGgMHGSNRLGGNSLSDLLVFGRRAGLGAADyVRGLGSRPAVSEEAVDAA 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 489 SVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKT-----FDRGivWNTdlveTL 563
Cdd:PRK07803 465 AREALAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVeghrqYNPG--WHL----AL 538
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 28374211 564 ELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDEydyskplqgqvkkpfeqhWRKHTLS-YVDPETGKVTLEYRP 640
Cdd:PRK07803 539 DLRNMLLVSECVARAALERTESRGGHTRDDHPGMDPE------------------WRRINLVcRADPVGGHVTVTRQP 598
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
85-599 |
1.52e-99 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 316.66 E-value: 1.52e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 85 ACVTKLFPTRSHTVAAQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGK 164
Cdd:PLN02815 55 AIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 165 IYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY-FALDLLM-EDGE---CKGVIALCMEDG 239
Cdd:PLN02815 133 LHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTsQDGGsivCHGADVLDTRTG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 240 SIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC------------LITEG 307
Cdd:PLN02815 205 EVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITEA 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 308 CRGEGGILINSEGERFMERYAPNAkDLASRDVVSRSMTIEIREGRgvgpdKDHVHLQLHHLPPQQLAARLPGISETAMIF 387
Cdd:PLN02815 285 VRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKRN-----EKYVLLDISHKPREEILSHFPNIAAECLKR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 388 aGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFG-RACAL 466
Cdd:PLN02815 359 -GLDITKQPIPVVPAAHYMCGGVRTGLQGET---------NVQGLYAAGEVACTGLHGANRLASNSLLEALVFArRAVQP 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 467 TIAEIDTPGEKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNI 546
Cdd:PLN02815 429 SIDHMARALRDVSAAAAWARPVAPTALADSVMDEILEWTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEAI 508
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 28374211 547 kTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVD 599
Cdd:PLN02815 509 -LFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
87-597 |
7.46e-93 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 296.52 E-value: 7.46e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 87 VTKLFPTRSHTVAAQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKiy 166
Cdd:PRK08071 31 ITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP-- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 167 qrafggqsLKFGKGGqAHRCCCV----ADRTGHSLLHTLYGRSLRYDTsyFVEY-FALDLLMEDGECKGVIALcMEDGSI 241
Cdd:PRK08071 107 --------LHLGKEG-AHRKRRIlhagGDATGKNLLEHLLQELVPHVT--VVEQeMVIDLIIENGRCIGVLTK-DSEGKL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 242 HRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAG-C--LITEGCRGEGGILINS 318
Cdd:PRK08071 175 KRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrCvgLVSEAVRGEGAVLINE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 319 EGERFMERYAPnAKDLASRDVVSRSMTIEIREGrgvgpdkDHVHLQLHHLPpqQLAARLPGIseTAMI-FAGVDVTKEPI 397
Cdd:PRK08071 255 DGRRFMMGIHP-LADLAPRDVVARAIHEELLSG-------EKVYLNISSIQ--NFEERFPTI--SALCeKNGVDIETKRI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 398 PVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIDTPGEK 477
Cdd:PRK08071 323 PVVPGAHFLMGGVKTNLDGET---------SIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKPRL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 478 LSPLKPNAgeasvanldKMRYANGSTRTSEIrlnmQKTMQSHAAVFRTGDVLKEGCVKME--SVYKSMDNIKTFDRgivw 555
Cdd:PRK08071 394 NPFAEKEK---------KFIVLNHLPTKEEI----QEKMMKYVGIVRTEQSLSEAKRWLEkyGVRNMILDHDALTN---- 456
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 28374211 556 ntdlvETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDR 597
Cdd:PRK08071 457 -----EEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR 493
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
77-594 |
5.80e-92 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 293.63 E-value: 5.80e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFnTACVTKLFPTRSHTVAAQGGINAALgnMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMP 156
Cdd:TIGR00551 21 LAEKGR-VSVITKASVTDSNSYYAQGGIAAAL--AETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 157 FSRTDDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLMEDGECKGViaLC 235
Cdd:TIGR00551 98 FDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARsEPNVNIIEGEFALDLLIETGRCAGV--FV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 236 MEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEG 312
Cdd:TIGR00551 168 QGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 313 GILINSEGERFMERYAPNAkDLASRDVVSRSMTIEIREGrgvgpDKDHVHLQLHHLPPqqLAARLPGISETaMIFAGVDV 392
Cdd:TIGR00551 248 AKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAV-CRGAGIDP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 393 TKEPIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAeid 472
Cdd:TIGR00551 319 EREPIPVAPGAHYTMGGISVDAFGRT---------TIPGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTIS--- 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 473 tpgekLSPLKpNAGEASVANLDKMRYANGSTRtSEIRLNMQK---TMQSHAAVFRTGDVLKEGCVKMESvyksmdniktf 549
Cdd:TIGR00551 387 -----REPPY-ASREYQSGVWDEPRSENPLDR-HELQHKMSSlrsVLWNHAGIVRLEWSLREALRKLVE----------- 448
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 28374211 550 drgivWNTDLVETLELQNLMLNAVQTIVSAEARKESRGAHAREDF 594
Cdd:TIGR00551 449 -----IQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
100-597 |
2.35e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 290.27 E-value: 2.35e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 100 AQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIyqrAFGGQSlkfgk 179
Cdd:PRK07512 50 AQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL---ALGLEA----- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 180 ggqAH---RCCCVA-DRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMEDGECKGViaLCMEDGSIHRFRAKNTVIATG 254
Cdd:PRK07512 120 ---AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVDDGAVAGV--LAATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 255 GYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGaGC----LITEGCRGEGGILINSEGERFMERYAPN 330
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDI-GRdpapLATEALRGEGAILINEDGERFMADIHPG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 331 AkDLASRDVVSRSMTIEIREGRGVgpdkdhvHLQLHHLPPQQLAARLPGISEtAMIFAGVDVTKEPIPVLPTVHYNMGGI 410
Cdd:PRK07512 274 A-ELAPRDVVARAVFAEIAAGRGA-------FLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 411 PTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIdTPGEKLSPLKPNAGEASV 490
Cdd:PRK07512 345 AVDADGRS---------SLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGT-PAAAAAPLSAAAAPALDP 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 491 ANLDKMRyangstrtseirlnmqKTMQSHAAVFRTGDVLKEGC---VKMESVYKSMDNIKTFDRGIVwntdlvetlelqn 567
Cdd:PRK07512 415 ADLALLR----------------PIMSRHVGVLRDADGLRRAIaalLPLEAGAGPAADPATVALLIA------------- 465
|
490 500 510
....*....|....*....|....*....|
gi 28374211 568 lmlnavqtiVSAEARKESRGAHAREDFKDR 597
Cdd:PRK07512 466 ---------VAALAREESRGAHFRTDFPLT 486
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
77-661 |
8.65e-90 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 291.11 E-value: 8.65e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGfntaCVTKLFP----TRSHTVAAQGGINAALGNMEQDDWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELE 151
Cdd:PRK08641 22 AAEAG----VHVDLFSlvpvKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 152 NFGMPFSRTDDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-EDG 226
Cdd:PRK08641 98 RMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLdDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 227 ECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC--LI 304
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 305 TEGCRGEGG-ILINSEGER--FMERYAPNAKDLASRDVVSRSM-TIEIREGRGVGpDKDHVHLQLHHLPPQQLAARLPGI 380
Cdd:PRK08641 250 SESARGEGGrVWTYKDGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGIN-GENMVYLDLSHKDPKELDIKLGGI 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 381 SETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKgqvitykdgQDHVVPGLYACGEAGcASVHGANRLGANSLLDLV-- 458
Cdd:PRK08641 329 LEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDYD---------QMTNIPGLFAAGECD-YSYHGANRLGANSLLSAIyg 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 459 --VFGRACALTIAEIDTPGEKLSP------LKpnAGEASVANLDKMryaNGSTRTSEIRLNMQKTMQSHAAVFRTGDVLK 530
Cdd:PRK08641 399 gmVAGPNAVEYIKGLGKSADDVSSsvfeqaLK--QEQEKFDNILSM---DGTENAYVLHKELGEWMTDNVTVVRENDKLL 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 531 EGCVKMESVYKSMDNIKTFDRGIVWNTDLVETLELQNLM-LNAVQTIvSAEARKESRGAHAREDFKDRVDEydyskplqg 609
Cdd:PRK08641 474 ETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLeLARVITI-GALNRNESRGAHYKPEFPERNDE--------- 543
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 28374211 610 qvkkpfeqHWRKHTLSYVDPETGKVTLEYRPViDSSLdaedcaaIPPAIRSY 661
Cdd:PRK08641 544 --------NWLKTTMATYTPEGEEPEFSYEDV-DTSL-------IPPRKRDY 579
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
85-624 |
8.91e-90 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 290.02 E-value: 8.91e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 85 ACVTKLFPTRSHTVAAQGGINAALGNMeqDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDgk 164
Cdd:PRK07395 35 GLITKDTLKTSASDWAQGGIAAAIAPD--DSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRHGQ-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 165 iyQRAFggqSLKfgkggQAHRCCCV---ADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLM--EDGECKGViaLCMED 238
Cdd:PRK07395 111 --HLAL---TLE-----AAHSRPRVlhaADTTGRAIVTTLTEQVLqRPNIEIISQALALSLWLepETGRCQGI--SLLYQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 239 GSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGIL 315
Cdd:PRK07395 179 GQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGAHL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 316 INSEGERFMERYAPnAKDLASRDVVSRSMTIEIREgRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFaGVDVTKE 395
Cdd:PRK07395 259 VDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQE 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 396 PIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRacalTIAEIDTPG 475
Cdd:PRK07395 336 PIPVAPAAHYWMGGVVTDLNNQT---------SIPGLYAVGETASTGVHGANRLASNSLLECLVFAA----QLAQLELPI 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 476 EklSPLKPNAGEASVAnLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIK-------- 547
Cdd:PRK07395 403 E--PPASPDLPPISFI-IDASQWKNEQEQIQRIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPlsqflanl 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 548 ------TFDRGIVwNTDLVETLELQNLmLNAVQTIV-SAEARKESRGAHAREdfkdrvdeyDYSKPlqgqvkkpfEQHWR 620
Cdd:PRK07395 480 ppgqtvSFNGPDA-EQQLRLWAETRNL-LDIAYLILkSALFRTESRGGHYRL---------DYPQT---------DPAWQ 539
|
....
gi 28374211 621 KHTL 624
Cdd:PRK07395 540 VHTL 543
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
77-661 |
1.04e-84 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 277.89 E-value: 1.04e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTacvtKLF-----PTRSHTVAAQGGINAALGNMEQDDWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVEL 150
Cdd:TIGR01811 17 LAELGYHV----KLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 151 ENFGMPFSRTDDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLMEDG 226
Cdd:TIGR01811 93 DAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVVDG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 227 E-CKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC--- 302
Cdd:TIGR01811 165 NrARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTwqs 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 303 ---LITEGCRGEGGI----------LINS--EGER--FMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPDKDHVHLQL 365
Cdd:TIGR01811 245 klrLMSESLRNDGRIwtpkekndnrDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDF 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 366 HH----LPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKgqvitykdgQDHVVPGLYACGEAGcA 441
Cdd:TIGR01811 325 SDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYD---------QMTNIPGLFAAGECD-F 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 442 SVHGANRLGANSLLDLVVFGR-ACALTIAEIDTP---GEKLSPLKPNAGEA---SVANLDKMRYANGSTRTSEIRLNMQK 514
Cdd:TIGR01811 395 SQHGANRLGANSLLSAIADGYfALPFTIPNYLGPelsSEDMPEDAPEFQAAlaeEQERFDRLLKMRGDENPYYLHRELGE 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 515 TMQSHAAVFRTGDVLKEGCVK----MESVYKSMD---NIKTFDRGIVWNTDLVETLELQNLMlnavqtIVSAEARKESRG 587
Cdd:TIGR01811 475 IMTENCGVSRNNEKLLKTDEKirelRERFWKNIDipgTTKESNQVLEFARRVADYLELAELM------CLDALNRNESCG 548
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28374211 588 AHAREDFKDRVDEYDYSkplqgqvkkpfEQHWRKHTLSYVDPETGKVTLEYRPVidssldaeDCAAIPPAIRSY 661
Cdd:TIGR01811 549 AHFRPEFPTPDGEAERN-----------DEEFLKVTAWEFQGENDAPEFHYEEL--------DFELVPPRKRDY 603
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
77-637 |
2.28e-81 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 267.22 E-value: 2.28e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNmeQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMP 156
Cdd:PRK07804 35 ARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGAR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 157 FSRTDDGKIYQRAFGGQSlkfgkggqAHRcccVA----DRTG----HSLLHTLYGRSLRYDTSYFVeyfaLDLLM-EDGE 227
Cdd:PRK07804 113 FDESPDGRWALTREGGHS--------RRR---IVhaggDATGaevqRALDAAVRADPLDIREHALA----LDLLTdGTGA 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 228 CKGVIALCMEDGSIHRF---RAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIY-GAGC- 302
Cdd:PRK07804 178 VAGVTLHVLGEGSPDGVgavHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFlGPAAg 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 303 ----LITEGCRGEGGILINSEGERFMERYAPNAkDLASRDVVSRSMTIEIREgRGVgpdkDHVHLQLHHLPpqQLAARLP 378
Cdd:PRK07804 258 gqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGD----DHVYLDARGIE--GFARRFP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 379 GISEtAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLYACGEAGCASVHGANRLGANSLLDLV 458
Cdd:PRK07804 330 TITA-SCRAAGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT---------SVPGLYAAGEVACTGVHGANRLASNSLLEGL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 459 VFGRACALTIAEIdtpgeklsplkpnAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMES 538
Cdd:PRK07804 400 VVGERAGAAAAAH-------------AAAAGRPRATPAVGPEPGLLPALDRAELQRAMTRGAGVLRSAAGLARAADRLAA 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 539 vyksmDNIKTFDRGivwntdlVETLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDeydyskplqgqvkkpfeqH 618
Cdd:PRK07804 467 -----GAPARVVPG-------RADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDD------------------E 516
|
570
....*....|....*....
gi 28374211 619 WRKHTLSYVDPETGKVTLE 637
Cdd:PRK07804 517 WARSIVVRLADDGNLVVVQ 535
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
100-600 |
1.44e-77 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 257.15 E-value: 1.44e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 100 AQGGINAALGnmEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDgkiyqrAFGGQSLKFGK 179
Cdd:PRK09077 49 AQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ------ANGEEGYHLTR 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 180 -GGQAHR-CCCVADRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMED------GECKGVIALCMEDGSIHRFRAKNTV 250
Cdd:PRK09077 121 eGGHSHRrILHAADATGKAVQTTLVERARNHPNITVLErHNAIDLITSDklglpgRRVVGAYVLNRNKERVETIRAKFVV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 251 IATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGILINSEGERFMERY 327
Cdd:PRK09077 201 LATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArsfLITEALRGEGAYLKLPDGTRFMPDF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 328 APNAkDLASRDVVSRSMTIEIREgRGVgpdkDHVHLQLHHLPPQQLAARLPGISETAMIFaGVDVTKEPIPVLPTVHYNM 407
Cdd:PRK09077 281 DERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIYERCLEL-GIDITKEPIPVVPAAHYTC 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 408 GGIPTNYKGQVitykDgqdhvVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEIDTPGEKLSPLkPNAGE 487
Cdd:PRK09077 354 GGVMVDLHGRT----D-----LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRLPKAPMPPTL-PAWDE 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 488 ASVANLDKMRYAngSTRTSEIRLnmqkTMQSHAAVFRTGDVLKegcvkmesvyKSMDNIKTFDRGI--------VWNtDL 559
Cdd:PRK09077 424 SRVTDSDEEVVI--QHNWHELRL----FMWDYVGIVRTTKRLE----------RALHRIRLLQQEIdeyyanfrVSN-NL 486
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 28374211 560 vetLELQNLMLNAVQTIVSAEARKESRGAHAREDFKDRVDE 600
Cdd:PRK09077 487 ---LELRNLVQVAELIVRCAMERKESRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
82-468 |
2.39e-68 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 229.57 E-value: 2.39e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 82 FNTACVTKLFPTRSHTVAAQGGINAALGnmeQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTD 161
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 162 DGKIYQRAfGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE--YFaLDLLMEDGECKGviALCMEDG 239
Cdd:PRK06175 104 KELSYTKE-GAHSV--------NRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDNTCIG--AICLKDN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 240 SIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC-----LITEGCRGEGGI 314
Cdd:PRK06175 172 KQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 315 LINSEGERFMeryapnaKDLASRDVVSRSMTIEIREgrgvgPDKDHVHLQLHHLPPQQLAARLPGISETAMIfAGVDVTK 394
Cdd:PRK06175 252 LLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEECLK-RGIDITK 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28374211 395 EPIPVLPTVHYNMGGIPTNYKGqvityKDGQDHvvpgLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTI 468
Cdd:PRK06175 319 DAIPVSPAQHYFMGGIKVDLNS-----KTSMKN----LYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKI 383
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
509-661 |
5.53e-63 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 204.60 E-value: 5.53e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 509 RLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKSMDNIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKESRGA 588
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 28374211 589 HAREDFKDRVDEydyskplqgqvkkpfeqHWRKHTLSYVDPETGKVTLEYRPVIDSSLdaedcaaIPPAIRSY 661
Cdd:pfam02910 81 HAREDYPERDDE-----------------NWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
77-594 |
1.02e-58 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 204.65 E-value: 1.02e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTKLfPTRSHTVAAQGGInaALGNMEQDDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMP 156
Cdd:PRK08401 20 LAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 157 FSRTDdgkiyqrAFGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSyFVEYFALDLLMEDGECKGVIAlcm 236
Cdd:PRK08401 97 FEGNE-------LEGGHSF--------PRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 237 eDGSIHRFRAknTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC--LITEGCRGEGGI 314
Cdd:PRK08401 158 -DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 315 LINSEGERFMeryapnaKDLASRDVVSRSMTIEIREGRGVGPDKDHVhlqlhhlppQQLAARLPGISeTAMIFAGVDVTK 394
Cdd:PRK08401 235 LVTGDGERFV-------NELETRDIVARAIYRKMQEGKGVFLDATGI---------EDFKRRFPQIY-AFLRKEGIDPSR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 395 EPIPVLPTVHYNMGGIPTNykgqvITYKDGqdhvVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRACALTIAEiDTP 474
Cdd:PRK08401 298 DLIPVTPIAHYTIGGISVD-----TFYRTG----IKNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISR-ERP 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 475 GEKLSPLKPNAGEaSVANLDKMRyangstrtsEIrlnmqktMQSHAAVFRTGDVLKEGCVKMESVyKSMDNIKTFDRGIv 554
Cdd:PRK08401 368 KLREVKEPPYHGY-ELGDVDSIR---------EI-------LWNHAGIVRSEESLREGLKKLEGI-EADPRLKLLAKGV- 428
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 28374211 555 wntdlvetlelqnlmlnavqtIVSAEARKESRGAHAREDF 594
Cdd:PRK08401 429 ---------------------LECALAREESRGAHYREDF 447
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
77-594 |
2.61e-49 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 182.71 E-value: 2.61e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 77 LSEAGFNTACVTklF---PTRSHTVAAQGGINAALGNMEQDD--WRwHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELE 151
Cdd:PRK07573 54 LGELGYNVKVFC--YqdsPRRAHSIAAQGGINAAKNYQNDGDsvYR-LFYDTVKGGDFRAREANVYRLAEVSVNIIDQCV 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 152 NFGMPFSRTDDGKIYQRAFGG-Q-SLKFGKGGQahrcccvadrTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLMED 225
Cdd:PRK07573 131 AQGVPFAREYGGLLANRSFGGaQvSRTFYARGQ----------TGQQLLLGAYQALSRQIAAGTVKMYTrtemLDLVVVD 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 226 GECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTStgdgNAMVT-RA-------GLPCqdleFVQFHPTGI 297
Cdd:PRK07573 201 GRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGS----NATAIwRAhkkgayfANPC----FTQIHPTCI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 298 YGAG------CLITEGCRGEGGILINS------------EGER--FMERYAPNAKDLASRDVVSRSMTIEIREGRGVGPD 357
Cdd:PRK07573 273 PVSGdyqsklTLMSESLRNDGRIWVPKkkgdkrkpndipEEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPT 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 358 KDHVHLQL----HHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVitykdgqdhVVPGLY 433
Cdd:PRK07573 353 GLGVYLDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMS---------TIPGLF 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 434 ACGEAGCaSVHGANRLGANSLLdlvvfgRACA-------LTIA-----EIDTPgeKLSPLKPNAGEA---SVANLDKMRY 498
Cdd:PRK07573 424 VIGEANF-SDHGANRLGASALM------QGLAdgyfvlpYTIGnyladTIGTP--KVSTDHPEFKEAeaeVQDRIDRLLN 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 499 ANGSTRTSEIRLNMQKTMQSHAAVFRTGDVLKEGCVKMESVYKS-MDNIKTFDRGIVWNTDL------VETLELQNLMln 571
Cdd:PRK07573 495 IKGKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEfWKNVRVPGSADELNQELekagrvADFLELGELM-- 572
|
570 580
....*....|....*....|...
gi 28374211 572 avqtIVSAEARKESRGAHAREDF 594
Cdd:PRK07573 573 ----CRDALHREESCGGHFREEH 591
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
100-462 |
2.60e-41 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 155.96 E-value: 2.60e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 100 AQGGINAALGNMEQ-----DDWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENfGMPFSRTDDGKiyqraFGGQS 174
Cdd:TIGR01813 42 AAGGMNAAGTDQQKalgieDSPELFIKDTLKGGRGINDPELVRILAEESKDAVDWLQD-GVGARLDDLIQ-----LGGHS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 175 LKfgkggQAHRCCCVAdRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-EDGECKGVIALcMEDGSIHRFRAKNTVIAT 253
Cdd:TIGR01813 116 VP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVK-GKGKGIYIKAAKAVVLAT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 254 GGYGRTF------------FSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTG-IYGAGCLITEGCRGEGGILINSEG 320
Cdd:TIGR01813 189 GGFGSNKemiakydptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 321 ERFMEryapnakDLASRDVVsrSMTIEIREGRG---VGPDKDHVHL-------------------QL---HHLPPQQLAA 375
Cdd:TIGR01813 269 ERFMN-------ELATRDKV--SDAILAQPGKDaylIFDDDVYKKAkmvdnyyrlgvaykgdsleELakqFGIPAAALKQ 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 376 RLPGISETA----------MIFAGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVItykDGQDHVVPGLYACGEAgCAS 442
Cdd:TIGR01813 340 TIKDYNGYVasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEVL---DANGKPIPGLFAAGEV-TGG 415
|
410 420
....*....|....*....|
gi 28374211 443 VHGANRLGANSLLDLVVFGR 462
Cdd:TIGR01813 416 VHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
79-462 |
9.78e-34 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 135.35 E-value: 9.78e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 79 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEQ----DDWRWHFYD-TVKGSDWLGDQDAIHYMTEQAPAAVVELENF 153
Cdd:PRK06481 82 DAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKaqgiADSNDKFYEeTLKGGGGTNDKALLRYFVDNSASAIDWLDSM 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 154 GMPFSRTDdgkiyqrAFGGQSLKfgkggQAHRcccVADRT--GHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGV 231
Cdd:PRK06481 162 GIKLDNLT-------ITGGMSEK-----RTHR---PHDGSavGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 232 IALcMEDGSIHRFRAKNTVIATGGYGRTF------------FSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYG 299
Cdd:PRK06481 227 KVK-INGKETKTISSKAVVVTTGGFGANKdmiakyrpdlkgYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 300 AGCLITEGCRGEGGILINSEGERFM-----------------ERYAPNAKDLASRDvvsRSMTIEIREGRGVGPDKDHVH 362
Cdd:PRK06481 306 KSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKD---RVKAIAQYEEKGFVEEGKTID 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 363 LQLHHL--PPQQLAARLPGISE-------------TAMifaGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVITyKDG 424
Cdd:PRK06481 383 ELAKKInvPAETLTKTLDTWNKavknkkdeafgrtTGM---DNDLSTGPyyaIKIAPGIHYTMGGVKINTNTEVLK-KDG 458
|
410 420 430
....*....|....*....|....*....|....*...
gi 28374211 425 QDhvVPGLYACGEAgCASVHGANRLGANSLLDLVVFGR 462
Cdd:PRK06481 459 SP--ITGLYAAGEV-TGGLHGENRIGGNSVADIIIFGR 493
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
238-462 |
1.24e-16 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 84.45 E-value: 1.24e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 238 DGSIHRFRAKNTVIATGGYG---------RTF------FSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYG--- 299
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 300 ----AGCLITEGCRGEGGILINSEGERFMeryapNAKDLasRDVVSRSMTIEIRE--GRG-------------------- 353
Cdd:PTZ00306 681 psnrTKYLGPEALRGSGGVLLNKNGERFV-----NELDL--RSVVSQAIIAQGNEypGSGgskfaycvlneaaaklfgkn 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 354 ------------------------VGPDKDHVHLQL---HHLPPQQLAARLPGisetAMIFAGVDVTKEPIPV---LPTV 403
Cdd:PTZ00306 754 slgfywkrlglfqrvddvkglaklIGCPVENLHRTLetyERLSTKKVACPLTG----KVVFPCVVGTQGPYYVafvTPSI 829
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 28374211 404 HYNMGG--------IPTNYKGQVITykdgqDHVVP--GLYACGEAgCASVHGANRLGANSLLDLVVFGR 462
Cdd:PTZ00306 830 HYTMGGclispsaeMQMEDNSVNIF-----EDRRPilGLFGAGEV-TGGVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
147-643 |
6.13e-14 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 74.96 E-value: 6.13e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 147 VVEL-ENFGMPFSRTDDGKiYQRAfG-------GQSLKfgkggqahrcCCVADRTGHSLLHTLYGRSlrydtsyfveyFA 218
Cdd:PRK06854 100 VVHLfEEWGLPIWKDENGK-YVRR-GrwqiminGESYK----------PIVAEAAKKALGDNVLNRV-----------FI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 219 LDLLMEDGECKGVIALCMEDGSIHRFRAKNTVIATGG----Y---------GRTFFSCtsahTSTGDGNAMVTRAG--LP 283
Cdd:PRK06854 157 TDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiYrprspgegrGRMWYPP----FNTGSGYAMGIRAGaeMT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 284 CQDLEFVQFH------PTGIYGAGCliteGCRgeggiLINSEGERFMERYAPNAKDLASRDVVSR--------SMTIEIR 349
Cdd:PRK06854 233 TFENRFIPLRfkdgygPVGAWFLLF----KAK-----AVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEENK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 350 EGRgvGPdkdhVHLQLHHLPPQ-QLAARL--------PGIsetAMIFAGVDV--TKEPIPVLPTVHYNMGGiptnYKGQV 418
Cdd:PRK06854 304 AGR--GP----IYMDTEEALQDkHLESELwedfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIVGS----HSGAS 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 419 ITYKDGQDHV--------------VPGLYACGEAGCASVH----GAnrlganslldlVVFGRACALTIAE--IDTPGEkl 478
Cdd:PRK06854 371 GYWVSGPEDWvpeeykwgynrmttVEGLFAAGDVVGGSPHkfssGS-----------FAEGRIAAKAAVRyiLDNKDE-- 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 479 splKPNAGEASVANLDKMRYAN--------GSTRTSEIRLN----------MQKTMQSHAA----VFRT-GDVLKEGCVK 535
Cdd:PRK06854 438 ---KPEIDDDQIEELKKEIYAPleryeefkDYSTDPDVNPNyispeqleerLQKIMDEYAGgistNYTTnEKLLEIALEL 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 536 MESVYKSMDNIKTFDrgivwNTDLVETLELQNLMLNAVQTIVSAEARKESR--GAHAREDFKDRVDEydyskplqgqvkk 613
Cdd:PRK06854 515 LEMLEEDSEKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDE------------- 576
|
570 580 590
....*....|....*....|....*....|
gi 28374211 614 pfeqHWRKHTLSYVDPETGKVTLEYRPVID 643
Cdd:PRK06854 577 ----NWKCFVNSRYDPGTGEWTIRKLPYYQ 602
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
127-470 |
5.87e-09 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 58.91 E-value: 5.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 127 SDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDG-----KIYQraFGGQSLKFgkggqahrcccvadRTGHSLLHTL 201
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKVL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 202 YGRSLRYDTSYFVEYFALDLLM-EDGECKGVIALCMEDGSIHRFRAKNTVIATGGYGR-----------TFFSCTSAhts 269
Cdd:PRK08275 144 YRQLKRARVLITNRIMATRLLTdADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA--- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 270 tGDGNAMVTRAGLPCQDLEFVQFHP--TGIYGAGCLITEGcrGEGGILINSEGERFMERYAPnakdlasrdvvSRSMTIE 347
Cdd:PRK08275 221 -GDGYAMAYHAGAELANLECFQINPliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWE 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 348 I-RE-GRGVGPdkdhVHLQLHHLPPQQlaarlpgISETAMIF--------------AGVDVTKEPIP-VLPTVHYNMG-- 408
Cdd:PRK08275 287 FyQElQSGNGP----VFLKLDHLAEET-------IQTIETILhtnerpsrgrfhegRGTDYRQQMVEmHISEIGFCSGhs 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 28374211 409 --GIPTNYKGQVitykdgqdhVVPGLYACGEAgcASVhganrlGANSLLDLVVFGRACALTIAE 470
Cdd:PRK08275 356 asGVWVNEKAET---------TVPGLYAAGDM--ASV------PHNYMLGAFTYGWFAGENAAE 402
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
103-476 |
9.30e-09 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 58.71 E-value: 9.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 103 GINAAL--GNMEQDDWrwhFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTDDGKIYQRAF---GGQSLKF 177
Cdd:PRK13800 59 GVNNAVipGKAEPEDY---VAEITRANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVhrsGSYVLPM 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 178 GKGGQAHRcccvadrtghSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCMEDGSIHRFRAKNTVIATGGYG 257
Cdd:PRK13800 136 PEGKDVKK----------ALYRVLRQRSMRERIRIENRLMPVRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 258 RT-------FFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHP--TGIYGAGCLITegCRGEGGILINSEGERFMErya 328
Cdd:PRK13800 206 RLglpasgyLYGTYENPTNAGDGYSMAYHAGAELSGIECFQINPliKDYNGPACAYV--ANPFGGYQVNAQGERFVD--- 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 329 pnakdlasRDVVSRSMTIEIRegRGVGPDKDHVHLQLHHLPPQQLAArLPGISETamifagvdvTKEpiPVLPTVHYNMG 408
Cdd:PRK13800 281 --------SDYWSGQMMAEVK--REIESARGPIYLKVSHLPEETLSA-LESILHT---------TER--PTRGTFHANRG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28374211 409 ---------------GIPTNYKGQVITYKDGQDHVVPGLYACGEAGCasVHGANRLGANSLLDLVvfGRACALTIAEIDT 473
Cdd:PRK13800 339 hdyrthdiemhiseiGLCSGHSASGVWVDEHARTTVPGLYAAGDLAC--VPHNYMIGAFVFGDLA--GAHAAGTLAEVPA 414
|
...
gi 28374211 474 PGE 476
Cdd:PRK13800 415 PGE 417
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
407-449 |
1.17e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 45.27 E-value: 1.17e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 28374211 407 MGGIPTNYKGQVITyKDGQdhVVPGLYACGEA---GCASVHGANRL 449
Cdd:PRK12834 485 LGGLETDLDSRVLG-ADGT--PLPGLYAAGEAagfGGGGVHGYNAL 527
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
407-449 |
1.12e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.09 E-value: 1.12e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 28374211 407 MGGIPTNYKGQVITyKDGQdhVVPGLYACGEA---GCASVHGANRL 449
Cdd:COG3573 486 LGGLQTDLDSRVLD-ADGQ--PIPGLYAAGEAagfGGGGVHGYRAL 528
|
|
| |
