Conserved Protein Domain Family
BRD4_CDT

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pfam17105: BRD4_CDT 
C-terminal domain of bromodomain protein 4
BRD4_CDT is the short highly conserved C-terminal domain of certain bromodomain proteins, notably Brd4. The Brd4 CTD interacts with the cyclin T1 and Cdk9 subunits of positive transcription elongation factor b (pTEFb) complex. Brd4 displaces negative regulators, the HEXIM1 and 7SKsnRNA complex, from pTEFb, thereby transforming it into an active form that can phosphorylate RNA pol II.
Statistics
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PSSM-Id: 465349
Aligned: 20 rows
Threshold Bit Score: 39.2988
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006001131  100 SSLDNDREVARKREQERRRREAM-AGTIDMNLQSDIMATFEENLY 143 
2_pfamImport    1 GTPDQQREMARRREQERRRREAVgTDTIDINFQSDLMAIFEENLF 45  
NP_001094373 1360 SMLDQQRELARKREQERRRREAM-AATIDMNFQSDLLSIFEENLF 1403
XP_006241136 1360 SMLDQQRELARKREQERRRREAM-AATIDMNFQSDLLSIFEENLF 1403
XP_008424636 1430 SALDQQRDRERLRERDRRFREAM-ADNIDINFQSDLMAIFEESLF 1473
EFX67183      247 TNADKERERQRLREQERRKREAL-AGQIDMNRQSDLMAAVIECKY 290 
XP_025411552 1225 DRAAEGRERQRLREQERRRREAM-VNQIDMNRQSDLMAAFEQTLA 1268
XP_001995769  676 DRAAAKRAEQRRAEQERRRREAM-AGQIDMNMQSDLMAAFEETLS 719 
XP_010713868  116 HPLVQDRNLARKMEQERRRKEAM-ACTIDMNLQSDIMATFEENLE 159 
XP_016155906  967 RTLDQDRNLARKMEQERRRKEAT-AWIIDVNLQRDIMASFEEYLE 1010
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