Conserved Protein Domain Family
SMP_C2CD2

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cd21682: SMP_C2CD2 
synaptotagmin-like mitochondrial-lipid-binding protein (SMP) domain found in C2 domain-containing protein 2 (C2CD2)
C2CD2, also called transmembrane protein 24-like (TMEM24L), may be a lipid-binding protein that shows high sequence similarity with C2 domain-containing protein 2-like (C2CD2L; also transmembrane protein 24 or TMEM24). C2CD2L is a lipid-binding protein that transports phosphatidylinositol, the precursor of phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2), from its site of synthesis in the endoplasmic reticulum to the cell membrane. It is a Ca2+-regulated component of endoplasmic reticulum (ER)-plasma membrane contacts in mammalian neurons. This model corresponds to the SMP domain of C2CD2, which may be implicated in lipid transport.
Statistics
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PSSM-Id: 439238
Aligned: 36 rows
Threshold Bit Score: 220.972
Created: 24-Apr-2020
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative lipid
Feature 1:putative lipid binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #  ##   #   #                   #     #                    #    # 
Q9Y426        59 GSDALLSWILTLGSWRSQWQAAWVTALNEEAerKGGPPFLSFEEDPRQqaLELVVQEVSSVLRSaEEKVVVCHVvGQAIQ 138 human
XP_018611069  61 DADALLNWALSLKSWRCQWRRAWVRALNERAasPERPVHLMFEEDGPQs-SELVVSHVTSFKASpERKNVCCQViGDRLQ 139 Asian bonytongue
XP_009303775  56 EADGILCWVLSLKNWRSQWRRAWFRSLNEEAcrSQSGIQLTFEDDGVQs-SELAVDQISSFTKTrGQKNVLCQVvGNKLQ 134 zebrafish
XP_019118994  56 EAASLLGWALSLKSWKSQWRGAWCRALNDESrkRGGPVVLTFEEDDVEa-SELTVSQVSSFQKSaRNKSASCSVvGEKLQ 134 large yellow cr...
XP_030648597  57 EANALLDWALSLKSWKTQWRRAWFSALNDESklLEGSILLNFEEDGVQv-SELSVGNISSFKTSpGRKNACCQVvGDKLQ 135 milkfish
XP_028839809  47 EAGALLNWALSQRSWKSQWRRAWFRTLNERAaeTANSVRLIFEEDGLQs-SDLVLDQVCSFRKSpGQKAMCCRVvGEKLQ 125 denticle herring
XP_030216062  60 EADALLEWMLSLQSWKSQWKEAWCRALNNESr-RSGGNLLSFDEDGLHs-SDLVVSQVCSFQKSsGHKTARCKLvGDKLQ 137 Atlantic cod
XP_020785930  61 EAEALLGWALSLKSWKNVWRAAWCRALNGESrkCRSPVVFTFEEDALEa-SELVVSQVTNFQKSlNHKAACCRMvAEKLQ 139 great blue-spot...
XP_031428058  60 EANTLLNWALSLKTWKTEWRKAWVRALSDQSklTGNSLQLSFEEDGLQs-TDLVLSQVSGIRKQaGGKVMRCQVaGEKLQ 138 Atlantic herring
XP_007259485  52 EAEVLLGWTLGLRSWRSEWRRSWFTALNQEAkaTGGQIQLTFEEDGVQt-AELTLGHISSFTKSaGQKNVQCQVfGEKLQ 130 Mexican tetra
Feature 1        # #                   # #   # #          # # #         #                       #
Q9Y426       139 FLVSETPAlg--agCRLYDMRLSPFHLQLEFHMKEkrEDLQISWSFISVPEMAVNIQPKalgedqvaetSAMSDVLKDIL 216 human
XP_018611069 140 FSLCVSPMattnagPLRYNITVSPLQLQLDLQMREaaGEVQISWALSHLDTWDLQMTPShtqs---naaAPSIAVVKDIV 216 Asian bonytongue
XP_009303775 135 FSLSAFPSsttsqtPLRYSVKISPLHLQLALQMKEvnGEVEISWRVLHLDSVDLQLMPSfaqg---dcqSLSDAAVTDRL 211 zebrafish
XP_019118994 135 FSVSAASTamvtaePRKYTVCIAPLELQLDLHMQEaeDMVKLSWGVSHLETRELQVTPTanqn---npyTSSVTAVKEQL 211 large yellow cr...
XP_030648597 136 FSLSATFTsspqapPLRYSVKMSPLHLQLDVQLKEakDEIHITWGVSQLDAWDLQLTPSftqa---daaGPSVEAVRDKL 212 milkfish
XP_028839809 126 FSLSAAQPnss-aePLRYSVKVSPLHLQLDLQMTEadGDVRLNWGLSGLDSSDLQLVPSfvqg---gaaGLSVHAVRDKL 201 denticle herring
XP_030216062 138 FSLNTKSPss--aePRPYTVEIAPLQIQLDLDLQEagEQVKVGWGVSYMDTRDLRLTPSltqd---ngtSPGVGELKDRI 212 Atlantic cod
XP_020785930 140 FCVSAASTnsaaspPCKYTVCIEPLEIQLDLLMKEteGEIQVTWGISQLDSGELQLKLVp--------nQVSIQLVKEQL 211 great blue-spot...
XP_031428058 139 FSVRAQPAgtvstePQQYTVTISPLQLQLDLQLTEanGEVRLNWGLLGLEPWDLQLSPCssqg---gsaGFGTSAVRERL 215 Atlantic herring
XP_007259485 131 FSLSALLNstsaeaPQRYSVKISPLQLQLALQLRDvdGQVQVTWTVENLDSALLQLTPShaq-----gaGLNDAAVMARL 205 Mexican tetra
Feature 1          ##    # ####    
Q9Y426       217 KHLAGSASPSVVLITKPT 234 human
XP_018611069 217 RQILCEAHPMVLLTSQPA 234 Asian bonytongue
XP_009303775 212 RQVLNGAQASVSLSSRPA 229 zebrafish
XP_019118994 212 RRLLCATRSSVLLSCRPA 229 large yellow croaker
XP_030648597 213 RQVLCRARPSVTLSGQPA 230 milkfish
XP_028839809 202 RQILCDVRPSVALSSRPA 219 denticle herring
XP_030216062 213 RRLLCAARPSVSLSCRPA 230 Atlantic cod
XP_020785930 212 YQLLCGTHPSVSLSSEVK 229 great blue-spotted mudskipper
XP_031428058 216 RQVLCRVRPSAVLSSRPA 233 Atlantic herring
XP_007259485 206 RKVLSNAHPSVILSSRSA 223 Mexican tetra

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