Conserved Protein Domain Family
BDHCT_assoc
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pfam16204: BDHCT_assoc (this model, PSSM-Id:435213 is obsolete and has been replaced by 465065)
BDHCT-box associated domain on Bloom syndrome protein
This family is found on Bloom syndrome-associated DEAD-box helicases in higher eukaryotes. It lies between the BDHCT, and DEAD-box families, pfam08072 and pfam00270.
Links
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Statistics
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PSSM-Id: 435213
Aligned: 16 rows
Threshold Bit Score: 160.742
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
XP_007479356  426 PLNWIYQANSHDLSVndmtafsslhsfqKGKSAFTGNLVREFKSLHLPSKPVSTTDCEgnfldkttrtfpnldistgmcs 505  gray short-ta...
XP_003475802  421 DSVWKHNPDILGSPV-------------EDDCCPAESSIKGPHVPHLPSNSLFSRECL---------------------- 465  domestic guin...
EHB03240      423 GSVWRYRPGSLSSLV-------------ETDSYPTRSSVKDLSVLPLPSHSLSTRECL---------------------- 467  naked mole-rat
XP_005320222  427 GSVWRHRPVSLDNPV-------------ESDFCPGGNSVKELNFPHLPSNSLSTGKCL---------------------- 471  thirteen-line...
EDM08651      414 GSLWRHRPDSLDNTV-------------QCDSCPVGHPGKELNSPYLPSHSLSTEECL---------------------- 458  Norway rat
1_pfamImport    1 PLNWTYQPNSHDQSVn------------GNKSFFTGNLVKEFKSLHLPSNPVSTIDCQgmh------------------d 50  
XP_003268551  425 GLMWRCRPDSLDGPM-------------EGDSCPTGNSMKELNFSHLPSNSVSPGDCL---------------------- 469  northern whit...
XP_020953543   50 ALLWRCRPASLGSPVasvss---psafpNGNSCPTGNSVKELAFPHCLSNSFSSGEHL---------------------- 104  pig
XP_010815296  424 SAMWGCRPDPLESPVkdlasvslpyafrKGDSCLAGNAVKEFTLPHLPSNSMSTRERL---------------------- 481  cattle
XP_023364578   50 GSAWRLRPDPCGSPV-------------EEDSS-GENFMKELAFPYLPSNPISPGEYL---------------------- 93   small-eared g...

XP_007479356  506 tQRTTPDKSESSSDKRNDSERISSSSQSPEPFISSNSVEISKTEEKYKRSHLLGNFLTSTAIKDQNKHINSVNDL-RNGF 584  gray short-ta...
XP_003475802  466 -LNTTPGKTGFSATSSTPFERPLFSSHLQKSFVSSNWAETPRVEKRNESSYFPGNVLTSTAVKDQKKHAASVNNL-ERES 543  domestic guin...
EHB03240      468 -LTTTPGKTGFLATMSTLPERPLFSSHLQKSFVSNNWAETPRIEKRNESSYFPGNVLTSTAVKDQNKHAASVNDL-EREN 545  naked mole-rat
XP_005320222  472 -LTTTPEKTESSDTLKNFFERPLFTSHLQKSFVSGNWAETPRIEKRNER-----NVLTSTAIKNQNKNIASKNYL-EGEI 544  thirteen-line...
EDM08651      459 -PTTASGKTGFSATPKSLSERPPLNSHLQKSFVSSNWAETPRTESRTESTYFPGSVLTSTTVKDESKHVASGRDI-EREV 536  Norway rat
1_pfamImport   51 iQRTTPEKSKLSSAKRNISESILLSSQSPEPFISSNSAEISRTGEKCKRSHLLGNFLTSTTIKDQNKHINSVNDLkRNNF 130 
XP_003268551  470 -LTTTLGKTGFSATRENLFERPLFNTHLQKSFVSSNWAETPRLGKKNESSYFPGNVLTSTAVKDQNKHTASINDL-ERET 547  northern whit...
XP_020953543  105 -LTTTPGKTGFSATTKTVFERPPFNSHLQKSFVSSNWAETPRVEKRNESSYFPGNVLTSTAVKDQNKHTTSINDL-EREI 182  pig
XP_010815296  482 -LTPPLGKTGVLATTKSPFERPLFSSHLQKSFVSSNWAETPRAEKRNESPDFPGNVLTSTAVKDQNKYTTSINDL-EREL 559  cattle
XP_023364578   94 -PTTALGKTGFLATTKNHCESMLLESSLQKSFVSNNWAETPKLEKSKESSFFPGSVLTSTAVKDQNKNTASINDL-EREI 171  small-eared g...

XP_007479356  585 SETQDIDIFDV-----DDfdDSDWENPNYNSAEEKSSKNKYLPIREGQPIKSFSERTPMTKTNCLLMASanqn--rsiSI 657  gray short-ta...
XP_003475802  544 QASPDVDNFNIdd--fDD--DDDWEKIMQDLTANKTSTAACQPIQKGGPLKSISEKIALAKMHSLPGAS---------VV 610  domestic guin...
EHB03240      546 QASHDVDNFNIdd-fdDD--DDDWENIMHDLAASKPSTAAYQPIKKGGPLKSVSEKISAAKTHCLPGASva--------- 613  naked mole-rat
XP_005320222  545 QASYDIDNFDIdd--fDD--DEDWENIMHNLTASKSSTAAYHPIKEGRPIKSVSEKISSAKTNCLSVSStaqtksfseSI 620  thirteen-line...
EDM08651      537 QASYDIDNFNIddfddDD--DDDWENIMHNFSVSKSSTAAYPPIKEGGPVKSLSERISSAKAKFLPVAStaqnknlseSI 614  Norway rat
1_pfamImport  131 SETQDIDTFDIdd--fDDfdDYDWENPSYNSVEEK-SKNMYLPIREGQPLKSSSERTPLSKTSCLSVVPanqn--sslSI 205 
XP_003268551  548 QPSYDIDNFDIdd--fDD--DDDWENIMHNLAASKSSTAAYQPIKEGRPIKSVSERLSSAKTNCLPVAStaqninfseSI 623  northern whit...
XP_020953543  183 QASCDIDNFDIdd-fdDD--DDDWENMMHNLAASKSSTAVYQPIKEGRPVKSVSERISSAKTDSLPVAStaqnknfseSI 259  pig
XP_010815296  560 QAACEIDNFDIdd-fdDD--DDDWENLMQNLAASKSSTAAYPPIKEGRPVKSVSERPSSAKTDCLPGASttqnknfseSI 636  cattle
XP_023364578  172 QASCEVDNFDIdd--fDD--DDDWENIMHNLAASKSSTTAHQPIREGRPVKSVSERISSAKTNCLPVAStaqninfseTI 247  small-eared g...

XP_007479356  658 QNCFDKSVQNRPSRNPEHEHFKSL 681  gray short-tailed opossum
XP_003475802  611 PHHTDKLTQNLASRNTSQERFQSL 634  domestic guinea pig
EHB03240      614 qhHTDKLTQNLASRNIKQECFQSL 637  naked mole-rat
XP_005320222  621 QNHTDNLAQNLASTNLRHERFQGL 644  thirteen-lined ground squirrel
EDM08651      615 QNCSDKFAQNLSSKNPKHEHFQSL 638  Norway rat
1_pfamImport  206 QNFSDKLVQNKPSRNPEQERFKSL 229 
XP_003268551  624 QNYTNKSAQNLASRNLKHERFQSL 647  northern white-cheeked gibbon
XP_020953543  260 HNYTDKSEQNLTSRNLKHKHFQSL 283  pig
XP_010815296  637 PNYPDKMEQNLASRNPKHERFQSL 660  cattle
XP_023364578  248 QSYTDKSEQDSTYRNVKHEHFQSL 271  small-eared galago
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