Conserved Protein Domain Family
JMTM_APLP2

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cd21709: JMTM_APLP2 
juxtamembrane and transmembrane (JMTM) domain found in amyloid-like protein 2 (APLP-2) and similar proteins
Amyloid-like protein 2 (APLP-2), also called amyloid protein homolog (APPH), or CDEI box-binding protein (CDEBP), may play a role in the regulation of hemostasis. Its soluble form may have inhibitory properties towards coagulation factors. APLP-2 may bind to the DNA 5'-GTCACATG-3'(CDEI box). It inhibits trypsin, chymotrypsin, plasmin, factor XIA, and plasma and glandular kallikrein. This model corresponds to juxtamembrane and transmembrane (JMTM) domain of APLP-2, which consists of the intact transmembrane (TM) domain with adjacent N-terminal juxtamembrane (JM) region.
Statistics
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PSSM-Id: 411992
Aligned: 7 rows
Threshold Bit Score: 166.641
Created: 27-Apr-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putativeputative
Feature 1:putative homodimer interface [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens APP forms a homodimer.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ##             #  ##  ## ##  ##  #  #                                           
Q06481       680 SVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLnKMQNHGYENPTYKYLE 759 human
XP_007894206 599 PEGALRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLnKMQNHGYENPTYKYLE 678 elephant shark
NP_001006317 670 NDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLsKMQNHGYENPTYKYLE 749 chicken
XP_014340407 649 SEGSLRDDFNFSSSALIGLLVIAVAIATVIVISLVLLRKRQYGTISHGIVEVDPMLSPEERHLnKMQNHGYENPTYKYLE 728 coelacanth
NP_001116484 681 SFRPLVDDFSFGSSALIGLLVIAVAIATVIVISLVLLRKRQYGTISHGIVEVDPMLTPEERHLsKMQNHGYENPTYKYLE 760 zebrafish
NP_001238753 667 TDGPLRNEFSFSSGALIGLLVIAVAIATIIVISLVLLRKRQYGTISHGIVEVDPMLTPEERHLnKMQNHGYENPTYKYLE 746 African clawed ...
XP_026988422 639 EIFRPLEDFNFQIGTLIYFLVITVAIATVIVIGLVRLRKMQYGTISHGIVEVDPMLSPEERHLcKMQNHGYENPTYKYLE 718 yellow catfish
Feature 1         
Q06481       760 Q 760 human
XP_007894206 679 Q 679 elephant shark
NP_001006317 750 Q 750 chicken
XP_014340407 729 Q 729 coelacanth
NP_001116484 761 Q 761 zebrafish
NP_001238753 747 Q 747 African clawed frog
XP_026988422 719 H 719 yellow catfish

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