Conserved Protein Domain Family
C1_Myosin-IXb

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cd20884: C1_Myosin-IXb 
protein kinase C conserved region 1 (C1 domain) found in unconventional myosin-IXb and similar proteins
Myosin-IXb, also called unconventional myosin-9b (Myo9b), is an actin-dependent motor protein of the unconventional myosin IX class. It is expressed abundantly in tissues of the immune system, like lymph nodes, thymus, and spleen, and in several immune cells including dendritic cells, macrophages and CD4+ T cells. Myosin-IXb contains a Ras-associating (RA) domain, a motor domain, a protein kinase C conserved region 1 (C1), and a Rho GTPase activating (RhoGAP) domain. Myosin-IXb acts as a motorized signaling molecule that links Rho signaling to the dynamic actin cytoskeleton. It regulates leukocyte migration by controlling RhoA signaling. Myosin-IXb is also involved in the development of autoimmune diseases, including rheumatoid arthritis, systemic lupus erythematosus, and type 1 diabetes. Moreover, Myosin-IXb is a ROBO-interacting protein that suppresses RhoA activity in lung cancer cells. This model corresponds to the C1 domain. The C1 domain is a cysteine-rich zinc binding domain that does not bind DNA nor possess structural similarity to conventional zinc finger domains; it contains two separate Zn(2+)-binding sites.
Statistics
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PSSM-Id: 410434
Aligned: 7 rows
Threshold Bit Score: 125.358
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:H C C C C H C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:Two non-consecutive sets of zinc-binding residues form two separate metal-binding sites.
  • Comment:Based on the structure evidence that Rattus norvegicus ROCK2 binds two Zn2+ ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              #            #  #            #  #    #  #       #    
Q13459       1628 QEHNGHVFASYQVsIPQSCEQCLSYIWlmDKALLCSVCKMTCHKKCVHKIQShCSYTY 1685 human
NP_001273098 1644 EEHNGHVFTNYQVsIRQSCEHCSSYIWpmEKACLCSVCKLTCHKKCMSKIQSsCTSCG 1701 chicken
OCU00813     1638 VETHGHVFVSYQVnIGQSCEHCSNTIWpmEKAYLCSVCKMVCHKKCLTRIQShCASGG 1695 African clawed frog
XP_006006187 1647 EEYNGHVFSNYQVtIVQSCEQCSSYIWgmEKALVCSACKMTCHKKCMPKIQYhCPVSC 1704 coelacanth
XP_007897076 1676 EEYYGHRFRSYQVnILQSCELCSSYIWtmERALLCCACNMTCHKKCLPKIQYpCSSTC 1733 elephant shark
TWW57936     1736 ESPLDHSFTNYQVsIMQSCDQCNSYIWamEKAYMCTYCKMVCHKKCLCKITTdCSTFS 1793 sansaifugu
RXM96956      944 EKRMGHVLSSYQVnIIQSCDQCTSYIFamEKALICSYCKIICHKKCISKIQNeCTSYC 1001 sterlet

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