5ECG


Conserved Protein Domain Family
BRCT_3

?
pfam18428: BRCT_3 (this model, PSSM-Id:408225 is obsolete and has been replaced by 465764)
BRCA1 C Terminus (BRCT) domain
Brca1 C-terminal (BRCT) domains are a common protein-protein interaction regions in proteins involved in the DNA damage response and DNA repair. For example 53BP1 which plays multiple roles in mammalian DNA damage repair, has a C-terminal tandem BRCT domain (BRCT2), which in its orthologs, Saccharomyces cerevisiae Rad9p and Schizosaccharomyces pombe Crb2, mediates binding to the equivalents of gammaH2AX. Structural and functional studies indicate that the 53BP1-BRCT2 domain is a competent binding module for phosphorylated peptides with a clear specificity for the DNA-damage marker gammaH2AX, and in isolation from other parts of 53BP1 is sufficient for localization to sites of DNA damage in cells associated with gammaH2AX.
Statistics
?
PSSM-Id: 408225
Aligned: 28 rows
Threshold Bit Score: 100.466
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5ECG_C        157 NPFQNLKVLLVSDQQq-NFLELWSEILMTGGAAS--VKQHHSSAHNkDialgvFDVV-VTDPS-CPASVLKCAEALQLPV 231 
EFN77763     1386 RPLAQLVVIIPNLLMdqQFAAFWAQVCDNAGAVV--LVAENSESIE-EmefdsAAVI-VSNQR-CPAWAVERAQQFRIPL 1460 Jerdon's jump...
KZC14794     1221 KPLAEVMIIIPNIESekLFTTFWQQICENAGAAV--LLADKPDTMEssv--egTVVI-LTNRS-SPLWVVEKANELQVPL 1294 Dufourea nova...
KOX79065     1262 KPLTQVVVIIPVVESekQFAPFWRQICENAGAVV--ILADKPDAVEife---qgTVV-LTNSL-CPSWAVDEANKLQIPL 1334 Melipona quad...
XP_003250928 1286 KPLAQVVIIIPFLESqkQFATFWRQVCENTGAVV--LLAEKPDAMEsfv---qgTIV-LTNSL-CPFWAIEKANKLQIPL 1358 honey bee
XP_001862573  256 NPFVGYCINIASLNK--DFTEFWSRVCKMAGGTVrlIKVETDLTPN-------LSGFmLTDQE-FPEDIKLRATRYGLQI 325  southern hous...
KPJ03090     1110 TFFKDKVILLCWEQD--TFVKFWERVATLAGATT---RVVNEENLNms---gaFALV--TDCD-CPHEVQNKANQDNIPL 1178 Asian swallow...
XP_021205883 1083 TFFKDKIILLCGDQD--TFVKFWERVCNLTGATT--RVVNEEDLNMtg----aFVLV--TDWE-CPHEVQNKANQDGIPL 1151 domestic silk...
EGG19233      893 AILSNTRIEIFAES---VFLEEWTTLLKSLGAKV--VKRIISVNDR-------VDIV-LTDGKkISSVLLKYTNAMKIPV 959  Cavenderia fa...
XP_321661     219 TPFASVCINVASLCK--DFNDFWSRVCKLAGGTVrlIKTESDITEN-------LTGYlLTDQE-FPEEIKIKATRNGLLV 288  Anopheles gam...
5ECG_C        232 VSQEWVIQCLIVGERIGFKQHPKYKHDYV 260 
EFN77763     1461 MSTTWVTQCLIEGKICLYNQHSRYRYNYT 1489 Jerdon's jumping ant
KZC14794     1295 LSTAWVVQCLIEGKLCRYDTQQRYKYNYI 1323 Dufourea novaeangliae
KOX79065     1335 LSTIWIVQCLIEGKLCPYDGKIRYKYNYK 1363 Melipona quadrifasciata
XP_003250928 1359 LSTTWIVQCLIEGKLCSYDASPRYKYNYK 1387 honey bee
XP_001862573  326 VSTVWVVQSLIVGRVCQPDSHEKLTQIYQ 354  southern house mosquito
KPJ03090     1179 VSTTWVVQCLIEAKVLAPTSHDKFSFMYT 1207 Asian swallowtail
XP_021205883 1152 VSTHWVIECLIQAEIVDPTCHDSFSFMYT 1180 domestic silkworm
EGG19233      960 VTTDWVIQSILEKTKLPYNQHPSFRFRSE 988  Cavenderia fasciculata
XP_321661     289 VSTVWVVQCLIMGRVCHPSSNEKLTQIYQ 317  Anopheles gambiae str. PEST
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap