Conserved Protein Domain Family
TRPM_tetra

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pfam16519: TRPM_tetra (this model, PSSM-Id:406826 is obsolete and has been replaced by 465156)
Tetramerisation domain of TRPM
TRPM7_tetra is a short anti-parallel coiled-coil tetramerisation domain of the transient receptor potential cation channel subfamily M member proteins 1-8. It is held together by extensive core packing and interstrand polar interactions. Transient receptor potential (TRP) channels comprise a large family of tetrameric cation-selective ion channels that respond to diverse forms of sensory input. The presence of cytoplasmic domains that direct channel assembly appears to be a feature of many voltage-gated ion channel superfamily members.
Statistics
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PSSM-Id: 406826
Aligned: 17 rows
Threshold Bit Score: 67.3373
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFN73002     1164 EERVKVTTDRVENMYQKIEDIDKKESTQNASLQTVEFRIRKLEELSQQTVAHLGV 1218 Florida carpenter ant
XP_021208485 1217 EERVRNTTDRVEHITTKMEDLNQKANCQIQSMQSVEFRLRKLEDIAEQTMSHLAV 1271 domestic silkworm
EEB10519     1096 DERIKTTTEKVENMYQKVEDINQKENAQTTSIQSVEFRLRKVEDVAEQILNHLDv 1150 human body louse
XP_003245193 1172 EERIKMSLEKTENIQQKVDDINQKENLQNSSVQALEFRLHKIEDLMDQTLSTLGV 1226 pea aphid
XP_002602021  615 NERIRMTQDRVEHMSMRVDEVHEKEGAVKVSLTSLDQRLARLENVSAVTTTTLQR 669  Florida lancelet
XP_013127048 1181 KNRIKVTAERTEEMCMMVGEVSEKVNFIQDNLSELDSQLGHLQDLSALAVDTLTF 1235 Nile tilapia
XP_023814357 1182 IKKIRAIAERAEEMSVMVGEISEKVNCIQHSLSELDCQMGQLQDLSALAVDTLTL 1236 Japanese medaka
2_pfamImport    1 INRIRATAERAEEMCTMVGEVSEKVIFIQDSLLDLDCQLGQLQDLSALAVDTLTL 55  
XP_015222646 1174 vHRIKTTLEKVEEMCLQLKDVAEKVFFVKETLQSLDNQLGHLQDLSALTVDTLSV 1228 spotted gar
XP_016082803  196 EERIRVTTERVAEMCFQMKEVHERVFYIKDSLVSLDSHLGHLQDLSALTVDTLKV 250  platypus
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