Conserved Protein Domain Family
SAP130_C

?
pfam16014: SAP130_C (this model, PSSM-Id:406422 is obsolete and has been replaced by 464973)
Histone deacetylase complex subunit SAP130 C-terminus
Statistics
?
PSSM-Id: 406422
Aligned: 7 rows
Threshold Bit Score: 606.157
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
NP_001092247  651 TLVSSPRPSILRKKPVTEG-AVRKCLIQAQpSEPNAGRVDSGIRL-SGSPRPAGVKPKPDIHVAMAPPVMAAVEALVGHV 728  zebrafish
XP_019207586  634 TLVSSPRPSILRKKPANET-CVRKNLIPAQ-TEASTGRIDSGVRG-AGSPRPAGVKPKAEVHMAVAPPVMATVEALPSQG 710  Nile tilapia
XP_007494039  634 AQGSSPRPSILRKKPATDGmAVRKSLIPPQpPEVTSPRVESSIRStSGSPRPSGAKPKPEIHVSMATPVTVSVEAVSNQS 713  gray short-ta...
KAE8604418    639 AQGSSPRPSILRKKPATDGlSVRKSLIPPHpGDAVSPRQDSSLRStSASPRPAGAKPKADLHVPVAPGVTGDPGA----- 713  tropical claw...
XP_006637717  644 tLISSPRPSILRKKPAGEGsAVRKNAFPSQaAEATSPRLDGAIRSaTGSPRPAGAKSKPEIHVAVTPPVTVTVEAMSIQS 723  spotted gar
XP_014341156  628 AQGSSPRPSILRKKPATDGlAVRKSLIPPQpSEATSPRLDSAMRNtSGSPRPAGAKPKPDIHVSVMPQVTVAVEAVPNQN 707  coelacanth
XP_007245136  632 TLVSSPRPSILRKKPAGEGaGVRKNLIPAQlGDP--GRMDVGIRGtSGSPRPAGVKPKPDILVGLAPPVNPAVEALTGQN 709  Mexican tetra
NP_001092247  729 GEQQTLST---PVQhhsQAIPTLLAPPApaPPSQPTAVLSALPATMAVTPPVPASMANAVASPTQPAASS-----TAALS 800  zebrafish
XP_019207586  711 GEQQVVSS---NTQhltQAIPTMLATPGpvPPSQPSTVLSSLPAAMAVTPPVPASMANTVASPTQPAASSt---pACATS 784  Nile tilapia
XP_007494039  714 SDQPTIAVq-pTSQqppPAIPTIIAAAS--PPSQPSVALSTIPGAVPVTPP----ITTIAAAT--PASSTvggslSTVMG 784  gray short-ta...
KAE8604418    714 ADQPNAAAslpSSHhpaAAVPS--------PPSQPAS--GPIPSSIHITPA---TIPALSAPP--PLLSN------APSG 772  tropical claw...
XP_006637717  724 SEQQAAPS---PAQhpsQAIPAILTAAAaaPPSQPTAALAALPAAMAVTPPIPASLANVVAPPTQPAASSt---aACAVS 797  spotted gar
XP_014341156  708 SEQPSLTVp-pTSQ---QAIPTIIPPPA--PPSQPPVTLSTLAASVPLATPTPVCLASVVAPSSQPAASTa---pSMVVG 778  coelacanth
XP_007245136  710 PDQQQNSAl-pPSQipaQPVSSLLTSAT--PTSQP------VPAAMAVTPPIP-SMANVVAPPSHPGATSt---aACPIS 776  Mexican tetra
NP_001092247  801 STLPEVKIKQEAEPMDTSQa-----vPlAPSLTGPAP---SLSSQSSTLTVSSqpGELLPGASPRKKPRKQQHVISTEET 872  zebrafish
XP_019207586  785 SVCPDVKIKQEVEAMDTSQ-------PdPNTSMSAAP---ALTTQTSTLSTPAt-GDLIPGASPRKKPRKQQHVISTEES 853  Nile tilapia
XP_007494039  785 PAVPEIKIKEEVEPMDIMRpvs--avP-PLTTNTVSP---SLALLANNLSMPP--SDLPPGASPRKKPRKQQHVISTEEG 856  gray short-ta...
KAE8604418    773 AVIPEAKVKEEAEPMDISRpv---svP-PLPPNSISS---PLTVLANNISIPA--GELLPGASPRKKPRKQQHVISTEEG 843  tropical claw...
XP_006637717  798 SALPEIKIKQEVEPMDTSQq-----vP-SVTPTVVAP---VLTPLGNSLGLSA--GDLLPGASPRKKPRKQQHVISTEES 866  spotted gar
XP_014341156  779 SMVPDIKIKQESEAMDTTQsvsvssvP-ALATTAISP---AMTPLANRLAPPP--SELPPGASPRKKPRKQQHVISTEEG 852  coelacanth
XP_007245136  777 STLPEIHVKQEAEQMDTSK-----------------PvgpAPPSGTPALAVPS--ADLTPGASPRKKPRKQQHVISTEES 837  Mexican tetra
NP_001092247  873 EMVETNSTDEERA-SSRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKK 951  zebrafish
XP_019207586  854 EMVETNSTDEEKT-PGRPITGRAERRESPPREYVDEEGVRYVPVKPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKK 932  Nile tilapia
XP_007494039  857 DMMETNSTDDEKS-TPKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK 935  gray short-ta...
KAE8604418    844 DMMETNSTDEERChAVKPLTSRPEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK 923  tropical claw...
XP_006637717  867 EMMETNSTDEEKS-TARPLAMKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDIRVKEEKK 945  spotted gar
XP_014341156  853 EMMETNSTDDEKF-APKPIVLKAEKQKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRHSDVRVKEEKK 931  coelacanth
XP_007245136  838 EMMEANSTDEERV-LTKPPSQRPEKRKSPPKEYIDEEGVRYVPVRIRPPVTLLRHYRNPWKAAYHHFQRYSDVRVKEEKK 916  Mexican tetra
NP_001092247  952 GSLQDMANQRGVACRAQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMD 1031 zebrafish
XP_019207586  933 GSLQDMANQRGVACRAQGWKIHLCAAQLRQLSSLEHDVYSRLSTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMD 1012 Nile tilapia
XP_007494039  936 AMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTTLQEGIIPKKKAATDDDLHRINELIQGNMQRCKLVMD 1015 gray short-ta...
KAE8604418    924 LTLQEVANQKGITCRVQGWKTHLCAAQLLQLIKLEQDVFERLTVLQEGLIPKKKTATDDDLHRINELIQGNMQRCKLVMD 1003 tropical claw...
XP_006637717  946 CTLQDMANQKGVVCRAQGWKIHLCAAQLLQLTSLERDVYSRLTTLQEGLIPKKKAGADDDLHRINELIQGNMQRCKLVID 1025 spotted gar
XP_014341156  932 MTLQEMANQKGITCRAQGWKVHLCAAQLMQLTNLEHDVYDRLATLQEGLIPKKKAATDDDLHRINELIQGNMQRCKLVMD 1011 coelacanth
XP_007245136  917 GSLQDVANQKGVVCRAQGWKIHLCSAQLQQLTNLEHDAYSRLTTLQEGLVPKKKSGGDDDLHRISELIQGNMQRCKLVMD 996  Mexican tetra
NP_001092247 1032 QVTEARDTMMKVLDHKDRVLKLLN 1055 zebrafish
XP_019207586 1013 QVTEARDTMMKVLDHKEKVLKLLN 1036 Nile tilapia
XP_007494039 1016 QISEARDSMLKVLDHKERVLKLLN 1039 gray short-tailed opossum
KAE8604418   1004 QITESRDCMLKVLDHKDRVLKLLN 1027 tropical clawed frog
XP_006637717 1026 QITEARDAMMKVLDHKDRVMKLLN 1049 spotted gar
XP_014341156 1012 QISEARESMMKVLDHKDRVLKLLN 1035 coelacanth
XP_007245136  997 QITEARESMMKVLDHRERVLKLLN 1020 Mexican tetra
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap