6G18


Conserved Protein Domain Family
WRNPLPNID

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pfam15017: WRNPLPNID (this model, PSSM-Id:405671 is obsolete and has been replaced by 464448)
Putative WW-binding domain and destruction box
This short conserved region is a putative destruction-box, with its RxxLxxI sequence motif, though the homology is not absolute. The domain occurs on a number of tumorigenic proteins, on some RNA-binding proteins and serine-threonine regulatory proteins. The second less well-conserved motif, WITPS, is a potential WW domain ligand-binding motif for recruiting proteins to their substrates. WW domains bind tightly to short proline-containing peptides that are typically in regions of native disordered polypeptide, as this family is as it lies between a PIN domain and a zinc-binding domain.
Statistics
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PSSM-Id: 405671
Aligned: 33 rows
Threshold Bit Score: 29.7187
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6G18_YY      152 LEFSSFMFWRNpLPNIDH-ELqelli--------drgedVPS--E-EEEEEENGF-------EDRKDDSDddg----ggW 208
EEN48324      39 EDFTDFTFWRDpLPLLSEdDF--------------------------------------------NTVDPapefndfnyW 74  Florida lancelet
XP_006005166   7 SQYNSFLFWRQpIPELDLaELeglgltda---lmhnpksAGRk-K----SDLREN-------SKEEEEYlslys-tfnfW 70  coelacanth
NP_001183990   7 SQYSSFLFWRMpIPELDLsELeglglsdtp-tykmkdssAGNv-T-GQAPGAERE-------KNLEGDAlleys-tfnfW 75  rabbit
XP_012405176   7 SQYSSFLFWRMpIPELDLsELeglglldmstyktrnnsnDGNl-S-EKPSEAVQQ-------KYPENDPlleys-tfnfW 76  Tasmanian devil
XP_007485468   7 SQYSSFLFWRMpIPELDLsELeglglldma-iyktpnssNGKl-TkEEPSGADQK-------SGPESDAlhefs-tfnfW 76  gray short-tail...
XP_007230860   7 SQFDSFLFWRQpIPSLDLaELedlg-----------lsvLPNsgQmGKTNKGMGKt-----lADEDDDPNlseystfnyW 70  Mexican tetra
A3KQS5         7 SQFDSFLFWRQpIPSLDLsELedl--------------------gisAPKSKEMKstksfprQDEDEDRElskfstfnfW 66  zebrafish
XP_015192187   7 SQYDSFLFWRQpIPELDLsELeglglvdg---vsikgsqGGKk-Q-KSSQNSRQW-------EEEEDEGlskyn-tfnyW 73  spotted gar
XP_002937308   7 SQYDSFLFWKLpIPELDLsELeclgled--------------sktrrakTSADQK-------KKEDGEEYlsqynafnfW 65  tropical clawed...
6G18_YY      209 ITPS 212
EEN48324      75 REPI 78  Florida lancelet
XP_006005166  71 RAPI 74  coelacanth
NP_001183990  76 RAPI 79  rabbit
XP_012405176  77 RAPI 80  Tasmanian devil
XP_007485468  77 RAPI 80  gray short-tailed opossum
XP_007230860  71 KEPI 74  Mexican tetra
A3KQS5        67 KEPI 70  zebrafish
XP_015192187  74 REPI 77  spotted gar
XP_002937308  66 RAPI 69  tropical clawed frog
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